View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19747_low_27 (Length: 214)
Name: NF19747_low_27
Description: NF19747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19747_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 11526599 - 11526427
Alignment:
| Q |
24 |
agtaggagctttaaggcgatgaatgttaacattgaataatttgaggacggtaaagtcacagattgagttgttagaagccttgtttgttaagtttccagtg |
123 |
Q |
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| T |
11526599 |
agtaggagctttagggcgatgaatgttaacattgaataatttgaggatggtaaagtcacggattgagttgttagaagccttgtttgttaagtttccagtg |
11526500 |
T |
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| Q |
124 |
agggaagtgttggagatgatatctgagatagcagacttccaatggatcaacttattactaaaccttgattcat |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11526499 |
agggaagtgttggagatgatatctgagatagcagacttccaatggatcaacttattactaaaccttgattcat |
11526427 |
T |
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