View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19747_low_3 (Length: 476)

Name: NF19747_low_3
Description: NF19747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19747_low_3
NF19747_low_3
[»] chr4 (9 HSPs)
chr4 (18-313)||(24258299-24258590)
chr4 (312-402)||(24258133-24258225)
chr4 (400-476)||(9128372-9128448)
chr4 (401-476)||(1655754-1655829)
chr4 (401-476)||(45223728-45223803)
chr4 (401-476)||(37153411-37153486)
chr4 (400-474)||(26651532-26651606)
chr4 (400-476)||(48078770-48078846)
chr4 (400-434)||(39466699-39466733)
[»] chr8 (5 HSPs)
chr8 (400-476)||(3790124-3790200)
chr8 (336-402)||(42935988-42936054)
chr8 (354-402)||(26084313-26084361)
chr8 (400-434)||(40305007-40305041)
chr8 (401-434)||(29007523-29007556)
[»] chr1 (6 HSPs)
chr1 (400-476)||(23781682-23781758)
chr1 (400-476)||(52635185-52635261)
chr1 (398-434)||(9135629-9135665)
chr1 (397-432)||(4682929-4682964)
chr1 (398-434)||(15998322-15998358)
chr1 (400-432)||(45925357-45925389)
[»] chr7 (4 HSPs)
chr7 (401-476)||(12810562-12810637)
chr7 (400-471)||(43872867-43872938)
chr7 (400-434)||(27878837-27878871)
chr7 (401-434)||(27878914-27878947)
[»] chr6 (6 HSPs)
chr6 (131-197)||(21762669-21762735)
chr6 (312-402)||(21762454-21762544)
chr6 (401-434)||(14897043-14897076)
chr6 (401-434)||(28034011-28034044)
chr6 (400-432)||(3750314-3750346)
chr6 (400-432)||(10644259-10644291)
[»] chr5 (1 HSPs)
chr5 (319-402)||(9045542-9045625)
[»] chr3 (3 HSPs)
chr3 (350-380)||(42656132-42656162)
chr3 (401-434)||(16607465-16607498)
chr3 (402-434)||(42605991-42606023)
[»] scaffold0200 (1 HSPs)
scaffold0200 (401-434)||(22413-22446)
[»] chr2 (2 HSPs)
chr2 (402-442)||(3055743-3055783)
chr2 (398-434)||(33618308-33618344)


Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 24258590 - 24258299
Alignment:
Q  18 aatgccacttaaaaaacaacatgaaccaaaccgatgaaagattgaaagaagtaaaaactaaaacaatcgaattcaaactccacagtgtatgttatttcaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24258590 aatgccacttaaaaaacaacatgaaccaaaccgatgaaagattgaaagaagtaaaaactaaaacaatcgaattcaaactccacaatgtatgttatttcaa 24258491  T
Q  118 tcgcattgaatttataattttgtcaatttccatgactggattccaaatcaacggtgctagcacaaacaaacataaaaacactacgttagaaagnnnnnnn 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||            
T  24258490 tcgcattgaatttataattttgtcaatttccatgactggattccaaatcaacggtgctagcacaaataaacataaaaacactacgttagaaa----aaaa 24258395  T
Q  218 nntcatttggattaaaagtaaaaacaacacaatattaggattgagagaattaccaattaagcaatgataggagagcatcacttcaactgcacgatc 313  Q
      || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24258394 aatcgtttggattaaaagtaaaaacaacacaatattaggattgagagaattaccaattaagcaatgataggagagtatcacttcaactgcacgatc 24258299  T

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Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 312 - 402
Target Start/End: Complemental strand, 24258225 - 24258133
Alignment:
Q  312 tcttaacacaacacacatata--gagagagaaaatgtagtgcagtgcatatatgcatgggaaatagggtggatatcaatttacatagaagata 402  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24258225 tcttaacacaacacacatatatagagagagaaaatgtagtgcagtgcatatatgcatgggaaatagggtggatattaatttacatagaagata 24258133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 9128372 - 9128448
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9128372 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 9128448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 1655829 - 1655754
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1655829 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 1655754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 45223803 - 45223728
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45223803 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 45223728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 37153486 - 37153411
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37153486 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagtaaaattgacttttt 37153411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 474
Target Start/End: Complemental strand, 26651606 - 26651532
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttt 474  Q
    ||||||||||||| || ||||||||||||||||||||||||||   ||| |||||||||||||||| ||||||||    
T  26651606 atactccctccgtgtcaaaatataagcaaaattcaactatcttgactgtaacaaaatataagcaaatttgacttt 26651532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 48078770 - 48078846
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    ||||| |||| ||||| |||||| ||||||||||||| ||||||  |||| |||||||||||||||||||| |||||    
T  48078770 atacttcctctgtatcaaaatattagcaaaattcaacaatcttaactgtgtcaaaatataagcaaaattgatttttt 48078846  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 39466699 - 39466733
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattca 434  Q
    |||||||||||||||| ||||||||||||||||||    
T  39466699 atactccctccgtatcaaaatataagcaaaattca 39466733  T

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Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 3790124 - 3790200
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3790124 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 3790200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 42936054 - 42935988
Alignment:
Q  336 agagaaaatgtagtgcagtgcatatatgcatgggaaatagggtggatatcaatttacatagaagata 402  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  42936054 agagaacatgtagtgcaatgcatatattcatgggaaatagggtggatattaatttacatggaagata 42935988  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 26084361 - 26084313
Alignment:
Q  354 tgcatatatgcatgggaaatagggtggatatcaatttacatagaagata 402  Q
    ||||||||| ||||||||||||| ||||||| ||||||||| |||||||    
T  26084361 tgcatatattcatgggaaataggatggatattaatttacatggaagata 26084313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 40305007 - 40305041
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattca 434  Q
    |||||||||||||||| ||||||||||||||||||    
T  40305007 atactccctccgtatcaaaatataagcaaaattca 40305041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 29007556 - 29007523
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| ||||||||||||||||||    
T  29007556 tactccctccgtatcaaaatataagcaaaattca 29007523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 23781758 - 23781682
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23781758 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 23781682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 52635185 - 52635261
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52635185 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 52635261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 9135665 - 9135629
Alignment:
Q  398 agatactccctccgtatcgaaatataagcaaaattca 434  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9135665 agatactccctccgtatcaaaatataagcaaaattca 9135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 432
Target Start/End: Original strand, 4682929 - 4682964
Alignment:
Q  397 aagatactccctccgtatcgaaatataagcaaaatt 432  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4682929 aagatactccctccgtatcaaaatataagcaaaatt 4682964  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 15998358 - 15998322
Alignment:
Q  398 agatactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| || ||||||||||||||||||    
T  15998358 agatactccctccgtttcaaaatataagcaaaattca 15998322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 432
Target Start/End: Complemental strand, 45925389 - 45925357
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaatt 432  Q
    |||||||||||||||| ||||||||||||||||    
T  45925389 atactccctccgtatcaaaatataagcaaaatt 45925357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 401 - 476
Target Start/End: Original strand, 12810562 - 12810637
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12810562 tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttt 12810637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 400 - 471
Target Start/End: Original strand, 43872867 - 43872938
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgac 471  Q
    |||||| |||||| || |||||||||||||||||||||||||||  ||| | | |||||||||||| |||||    
T  43872867 atactctctccgtgtcaaaatataagcaaaattcaactatcttagctgtaatagaatataagcaaatttgac 43872938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 27878837 - 27878871
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaattca 434  Q
    |||||||||||||||| ||||||||||||||||||    
T  27878837 atactccctccgtatcaaaatataagcaaaattca 27878871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 27878947 - 27878914
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| ||||||||||||||||||    
T  27878947 tactccctccgtatcaaaatataagcaaaattca 27878914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 21762735 - 21762669
Alignment:
Q  131 ataattttgtcaatttccatgactggattccaaatcaacggtgctagcacaaacaaacataaaaaca 197  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  21762735 ataattttgccaatttccatgactggattccgaatcaacggtgctagcaaaaataaacataaaaaca 21762669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 402
Target Start/End: Complemental strand, 21762544 - 21762454
Alignment:
Q  312 tcttaacacaacacacatatagagagagaaaatgtagtgcagtgcatatatgcatgggaaatagggtggatatcaatttacatagaagata 402  Q
    ||||| |||||||||| |||| | |||||| |||||||||| ||||||||||| ||||||||| ||||||||  ||||||||| |||||||    
T  21762544 tcttagcacaacacacgtatatatagagaacatgtagtgcaatgcatatatgcctgggaaataaggtggatactaatttacatggaagata 21762454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Original strand, 14897043 - 14897076
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| ||||||||||||||||||    
T  14897043 tactccctccgtatcaaaatataagcaaaattca 14897076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Original strand, 28034011 - 28034044
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| ||||||||||||||||||    
T  28034011 tactccctccgtatcaaaatataagcaaaattca 28034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 432
Target Start/End: Complemental strand, 3750346 - 3750314
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaatt 432  Q
    |||||||||||||||| ||||||||||||||||    
T  3750346 atactccctccgtatcaaaatataagcaaaatt 3750314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 432
Target Start/End: Original strand, 10644259 - 10644291
Alignment:
Q  400 atactccctccgtatcgaaatataagcaaaatt 432  Q
    |||||||||||||||| ||||||||||||||||    
T  10644259 atactccctccgtatcaaaatataagcaaaatt 10644291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 402
Target Start/End: Complemental strand, 9045625 - 9045542
Alignment:
Q  319 acaacacacatatagagagagaaaatgtagtgcagtgcatatatgcatgggaaatagggtggatatcaatttacatagaagata 402  Q
    ||||||||| |||  | |||||| |||||||||| ||||||||| ||||| ||||||||||||||| ||||||||| |||||||    
T  9045625 acaacacacgtatgtatagagaacatgtagtgcactgcatatattcatggaaaatagggtggatattaatttacatggaagata 9045542  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 380
Target Start/End: Complemental strand, 42656162 - 42656132
Alignment:
Q  350 gcagtgcatatatgcatgggaaatagggtgg 380  Q
    |||||||||||||||||||||||||||||||    
T  42656162 gcagtgcatatatgcatgggaaatagggtgg 42656132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 16607498 - 16607465
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| ||||||||||||||||||    
T  16607498 tactccctccgtatcaaaatataagcaaaattca 16607465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 42605991 - 42606023
Alignment:
Q  402 actccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||| |||||||||||||||||||||    
T  42605991 actccctccgtttcgaaatataagcaaaattca 42606023  T

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Target: scaffold0200 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 22446 - 22413
Alignment:
Q  401 tactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| ||||||||||||||||||    
T  22446 tactccctccgtatcaaaatataagcaaaattca 22413  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 3055783 - 3055743
Alignment:
Q  402 actccctccgtatcgaaatataagcaaaattcaactatctt 442  Q
    ||||||||| | || ||||||||||||||||||||||||||    
T  3055783 actccctccatgtcaaaatataagcaaaattcaactatctt 3055743  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 33618344 - 33618308
Alignment:
Q  398 agatactccctccgtatcgaaatataagcaaaattca 434  Q
    ||||||||||||||| || ||||||||||||||||||    
T  33618344 agatactccctccgtttcaaaatataagcaaaattca 33618308  T

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