View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19748_high_64 (Length: 255)

Name: NF19748_high_64
Description: NF19748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19748_high_64
NF19748_high_64
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-244)||(3699-3941)
[»] chr4 (30 HSPs)
chr4 (1-239)||(13449035-13449272)
chr4 (2-217)||(5407087-5407301)
chr4 (2-163)||(47470431-47470593)
chr4 (1-135)||(18241313-18241447)
chr4 (1-159)||(41258480-41258639)
chr4 (3-140)||(10239562-10239698)
chr4 (1-172)||(13596107-13596279)
chr4 (1-172)||(19557247-19557417)
chr4 (1-172)||(50224243-50224416)
chr4 (1-160)||(41919349-41919507)
chr4 (1-139)||(14569320-14569456)
chr4 (1-108)||(12729321-12729428)
chr4 (24-172)||(5373203-5373351)
chr4 (1-126)||(42706699-42706826)
chr4 (63-171)||(12136371-12136481)
chr4 (2-113)||(18274726-18274837)
chr4 (3-127)||(54366182-54366306)
chr4 (24-114)||(12246382-12246471)
chr4 (4-125)||(7188063-7188185)
chr4 (1-114)||(41168061-41168175)
chr4 (64-172)||(19624119-19624229)
chr4 (8-114)||(13814990-13815097)
chr4 (25-112)||(15116449-15116536)
chr4 (1-114)||(15853428-15853542)
chr4 (81-136)||(17194572-17194627)
chr4 (2-140)||(38762695-38762832)
chr4 (165-238)||(47470328-47470401)
chr4 (81-164)||(17378286-17378371)
chr4 (3-114)||(27958968-27959080)
chr4 (167-238)||(41919243-41919315)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-235)||(35838-36070)
[»] chr6 (29 HSPs)
chr6 (1-244)||(19670450-19670693)
chr6 (1-232)||(31469543-31469771)
chr6 (1-163)||(15006727-15006889)
chr6 (1-163)||(34964846-34965008)
chr6 (1-172)||(22595747-22595920)
chr6 (1-125)||(12311139-12311263)
chr6 (1-157)||(29163018-29163175)
chr6 (1-140)||(29603489-29603628)
chr6 (5-118)||(19852218-19852331)
chr6 (1-140)||(22846037-22846174)
chr6 (1-140)||(17085670-17085808)
chr6 (25-188)||(23218920-23219083)
chr6 (3-139)||(17858490-17858625)
chr6 (1-139)||(16373901-16374039)
chr6 (1-140)||(16889924-16890067)
chr6 (25-114)||(7830056-7830145)
chr6 (64-172)||(22468195-22468305)
chr6 (1-116)||(6092443-6092558)
chr6 (2-116)||(25649170-25649283)
chr6 (64-138)||(16131234-16131307)
chr6 (1-65)||(23025032-23025096)
chr6 (24-114)||(21927385-21927475)
chr6 (3-116)||(25369583-25369697)
chr6 (2-116)||(33540377-33540490)
chr6 (1-116)||(941177-941291)
chr6 (4-114)||(22364380-22364491)
chr6 (25-114)||(21411542-21411631)
chr6 (2-109)||(25917604-25917711)
chr6 (1-107)||(21621041-21621147)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-244)||(141270-141513)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-244)||(20060-20302)
[»] chr7 (37 HSPs)
chr7 (1-244)||(28388379-28388621)
chr7 (1-244)||(18921082-18921313)
chr7 (1-172)||(17948113-17948285)
chr7 (1-188)||(21677569-21677755)
chr7 (4-172)||(4482185-4482355)
chr7 (1-139)||(28717959-28718097)
chr7 (1-140)||(31499159-31499300)
chr7 (1-134)||(20587746-20587879)
chr7 (1-163)||(9323155-9323317)
chr7 (1-140)||(33555588-33555728)
chr7 (1-172)||(9640966-9641138)
chr7 (63-172)||(17922962-17923073)
chr7 (1-140)||(14938622-14938761)
chr7 (1-140)||(15366215-15366354)
chr7 (1-160)||(39294252-39294412)
chr7 (1-145)||(16381827-16381969)
chr7 (1-125)||(34243274-34243399)
chr7 (2-125)||(14279038-14279161)
chr7 (1-140)||(48345502-48345640)
chr7 (1-126)||(9058754-9058879)
chr7 (3-172)||(12245608-12245778)
chr7 (1-172)||(18081386-18081557)
chr7 (24-125)||(9609182-9609283)
chr7 (24-125)||(9836754-9836855)
chr7 (1-135)||(4436799-4436936)
chr7 (6-135)||(4444205-4444337)
chr7 (4-114)||(5617373-5617484)
chr7 (4-109)||(16915566-16915672)
chr7 (1-139)||(3194142-3194279)
chr7 (2-111)||(16651365-16651475)
chr7 (2-111)||(17625725-17625835)
chr7 (25-114)||(10863065-10863154)
chr7 (65-139)||(13460346-13460419)
chr7 (68-138)||(15980636-15980705)
chr7 (172-238)||(17948021-17948087)
chr7 (24-125)||(16930097-16930198)
chr7 (24-125)||(16935480-16935581)
[»] chr1 (29 HSPs)
chr1 (3-239)||(18164127-18164361)
chr1 (1-172)||(40555289-40555461)
chr1 (1-173)||(46143692-46143866)
chr1 (1-172)||(41213746-41213917)
chr1 (4-172)||(5472479-5472653)
chr1 (1-172)||(5770283-5770455)
chr1 (1-140)||(50002066-50002205)
chr1 (1-135)||(29217071-29217204)
chr1 (6-172)||(33383841-33384008)
chr1 (1-172)||(21041706-21041879)
chr1 (1-125)||(21193075-21193200)
chr1 (1-172)||(78578-78751)
chr1 (1-173)||(52397574-52397747)
chr1 (1-113)||(20957176-20957288)
chr1 (23-173)||(9293485-9293636)
chr1 (1-141)||(12891446-12891585)
chr1 (4-109)||(37236109-37236214)
chr1 (1-118)||(40438459-40438575)
chr1 (1-125)||(22148536-22148660)
chr1 (1-108)||(25090988-25091095)
chr1 (165-239)||(5770190-5770264)
chr1 (25-114)||(22837754-22837844)
chr1 (3-109)||(19601109-19601215)
chr1 (1-118)||(20191677-20191794)
chr1 (4-114)||(17021474-17021585)
chr1 (1-114)||(17606840-17606954)
chr1 (3-116)||(36358450-36358564)
chr1 (165-238)||(40555480-40555553)
chr1 (165-238)||(41213654-41213727)
[»] chr8 (37 HSPs)
chr8 (1-238)||(19334032-19334269)
chr8 (1-163)||(20707702-20707864)
chr8 (1-172)||(18043239-18043411)
chr8 (3-140)||(18263525-18263661)
chr8 (1-172)||(33170165-33170337)
chr8 (104-235)||(21234029-21234161)
chr8 (1-163)||(23216571-23216731)
chr8 (3-125)||(15931239-15931363)
chr8 (1-172)||(22499392-22499564)
chr8 (2-112)||(24265910-24266019)
chr8 (1-168)||(24554666-24554835)
chr8 (1-172)||(7468215-7468385)
chr8 (1-163)||(23118938-23119100)
chr8 (24-171)||(29295817-29295963)
chr8 (2-96)||(21234192-21234286)
chr8 (4-102)||(27233352-27233450)
chr8 (1-139)||(24236946-24237083)
chr8 (23-172)||(45561793-45561945)
chr8 (1-169)||(17499771-17499941)
chr8 (1-171)||(22725524-22725694)
chr8 (1-126)||(26009345-26009471)
chr8 (26-140)||(22317441-22317554)
chr8 (1-172)||(17264412-17264583)
chr8 (1-125)||(37655779-37655905)
chr8 (1-116)||(5851414-5851531)
chr8 (61-172)||(22311030-22311143)
chr8 (1-172)||(22883704-22883874)
chr8 (1-172)||(25607813-25607985)
chr8 (1-109)||(11599987-11600095)
chr8 (24-168)||(16000121-16000263)
chr8 (1-171)||(11541919-11542092)
chr8 (165-239)||(20707893-20707967)
chr8 (1-114)||(22738117-22738231)
chr8 (25-114)||(17731678-17731768)
chr8 (24-109)||(17283173-17283258)
chr8 (1-52)||(23229498-23229550)
chr8 (78-110)||(23350163-23350195)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-238)||(103900-104131)
[»] chr5 (28 HSPs)
chr5 (1-173)||(24082029-24082202)
chr5 (8-172)||(5623504-5623670)
chr5 (1-172)||(23236496-23236668)
chr5 (1-140)||(3420952-3421091)
chr5 (1-140)||(29911961-29912100)
chr5 (1-172)||(19871828-19871999)
chr5 (1-125)||(24228075-24228199)
chr5 (1-173)||(6454618-6454793)
chr5 (67-172)||(23411967-23412073)
chr5 (2-160)||(14345769-14345927)
chr5 (1-135)||(16837860-16837993)
chr5 (1-132)||(22879811-22879941)
chr5 (8-133)||(26561914-26562038)
chr5 (1-114)||(28887805-28887919)
chr5 (61-172)||(11963569-11963682)
chr5 (69-172)||(20456649-20456754)
chr5 (4-114)||(21228523-21228634)
chr5 (1-136)||(37483114-37483250)
chr5 (24-109)||(21614949-21615033)
chr5 (25-135)||(11765837-11765945)
chr5 (165-239)||(23236403-23236477)
chr5 (3-113)||(430713-430824)
chr5 (1-116)||(5453471-5453589)
chr5 (25-114)||(23452807-23452895)
chr5 (25-114)||(23460051-23460139)
chr5 (25-114)||(23464312-23464400)
chr5 (64-139)||(37985817-37985892)
chr5 (1-42)||(11963171-11963213)
[»] chr3 (39 HSPs)
chr3 (1-172)||(43429625-43429797)
chr3 (1-235)||(31416242-31416475)
chr3 (8-172)||(21168791-21168957)
chr3 (3-172)||(22637248-22637416)
chr3 (1-173)||(4164330-4164504)
chr3 (1-172)||(12950483-12950657)
chr3 (27-172)||(6817720-6817866)
chr3 (2-172)||(41659530-41659702)
chr3 (1-173)||(6230744-6230918)
chr3 (23-140)||(4147813-4147931)
chr3 (1-140)||(18967991-18968129)
chr3 (1-171)||(8602219-8602391)
chr3 (3-172)||(17320665-17320834)
chr3 (78-172)||(10902470-10902566)
chr3 (1-115)||(14819971-14820084)
chr3 (4-168)||(15551987-15552153)
chr3 (3-125)||(33371499-33371621)
chr3 (2-172)||(5230699-5230871)
chr3 (1-118)||(14182532-14182649)
chr3 (67-171)||(37918968-37919074)
chr3 (1-125)||(34557783-34557907)
chr3 (1-139)||(15988443-15988579)
chr3 (1-172)||(17760891-17761060)
chr3 (1-172)||(19062211-19062380)
chr3 (2-138)||(40041679-40041819)
chr3 (1-110)||(55513848-55513957)
chr3 (13-139)||(17390931-17391056)
chr3 (4-114)||(12019841-12019952)
chr3 (3-116)||(14061399-14061513)
chr3 (3-111)||(25769133-25769242)
chr3 (1-109)||(13330767-13330874)
chr3 (64-139)||(25106457-25106532)
chr3 (1-140)||(15548422-15548563)
chr3 (165-238)||(17320573-17320646)
chr3 (1-58)||(38378370-38378428)
chr3 (165-238)||(43429533-43429606)
chr3 (3-114)||(11331120-11331232)
chr3 (78-118)||(8687860-8687900)
chr3 (78-118)||(9039729-9039769)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-140)||(99061-99200)
[»] scaffold0480 (1 HSPs)
scaffold0480 (1-183)||(11076-11259)
[»] chr2 (18 HSPs)
chr2 (1-172)||(24271962-24272135)
chr2 (1-138)||(30995102-30995240)
chr2 (1-172)||(6092367-6092538)
chr2 (1-125)||(43640264-43640388)
chr2 (1-126)||(19436054-19436179)
chr2 (81-160)||(18533352-18533432)
chr2 (1-171)||(19647999-19648171)
chr2 (25-114)||(23823642-23823730)
chr2 (25-114)||(23825586-23825674)
chr2 (1-102)||(22137969-22138070)
chr2 (3-114)||(24089571-24089683)
chr2 (5-139)||(20270849-20270985)
chr2 (89-168)||(19643889-19643970)
chr2 (3-114)||(22582145-22582257)
chr2 (25-116)||(32738405-32738496)
chr2 (64-139)||(24839403-24839478)
chr2 (24-114)||(25303524-25303614)
chr2 (24-114)||(40642477-40642566)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-140)||(3145-3285)
[»] scaffold0219 (2 HSPs)
scaffold0219 (1-132)||(26144-26276)
scaffold0219 (89-163)||(26065-26140)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-172)||(6972-7144)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-172)||(19255-19427)
[»] scaffold0004 (3 HSPs)
scaffold0004 (12-172)||(25477-25639)
scaffold0004 (78-133)||(84414-84469)
scaffold0004 (165-239)||(25658-25732)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-135)||(488-623)
[»] scaffold0442 (2 HSPs)
scaffold0442 (1-126)||(2106-2230)
scaffold0442 (1-118)||(14250-14367)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-125)||(99326-99450)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-125)||(11351-11476)
[»] scaffold0561 (1 HSPs)
scaffold0561 (1-172)||(4828-5001)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-125)||(2857-2982)
[»] scaffold0010 (2 HSPs)
scaffold0010 (78-163)||(123520-123606)
scaffold0010 (4-125)||(29021-29143)
[»] scaffold0009 (2 HSPs)
scaffold0009 (64-172)||(99027-99137)
scaffold0009 (24-126)||(66481-66582)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-125)||(199478-199602)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-172)||(10199-10371)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-139)||(247920-248056)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-145)||(45696-45840)
[»] scaffold0047 (1 HSPs)
scaffold0047 (67-171)||(73371-73477)
[»] scaffold0236 (1 HSPs)
scaffold0236 (4-114)||(25514-25625)
[»] scaffold1949 (1 HSPs)
scaffold1949 (1-98)||(1115-1212)
[»] scaffold0028 (2 HSPs)
scaffold0028 (4-140)||(77650-77788)
scaffold0028 (1-139)||(70421-70559)
[»] scaffold0786 (1 HSPs)
scaffold0786 (1-102)||(4661-4762)
[»] scaffold0390 (2 HSPs)
scaffold0390 (1-106)||(3194-3299)
scaffold0390 (1-106)||(16178-16283)
[»] scaffold0151 (1 HSPs)
scaffold0151 (3-116)||(31788-31902)
[»] scaffold0080 (1 HSPs)
scaffold0080 (2-125)||(25747-25872)
[»] scaffold0032 (2 HSPs)
scaffold0032 (2-135)||(101921-102054)
scaffold0032 (1-140)||(106730-106869)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-140)||(7263-7400)
[»] scaffold0025 (2 HSPs)
scaffold0025 (24-140)||(51250-51365)
scaffold0025 (64-139)||(2465-2539)
[»] scaffold0138 (1 HSPs)
scaffold0138 (7-140)||(24547-24682)
[»] scaffold0725 (1 HSPs)
scaffold0725 (1-172)||(7000-7173)
[»] scaffold0021 (2 HSPs)
scaffold0021 (36-165)||(19908-20037)
scaffold0021 (36-165)||(29484-29613)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-135)||(9273-9414)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-136)||(12777-12914)
[»] scaffold0331 (1 HSPs)
scaffold0331 (23-145)||(11291-11411)
[»] scaffold0216 (1 HSPs)
scaffold0216 (69-172)||(23195-23300)
[»] scaffold1068 (1 HSPs)
scaffold1068 (1-52)||(1234-1286)
[»] scaffold0521 (1 HSPs)
scaffold0521 (1-109)||(6488-6595)
[»] scaffold0022 (1 HSPs)
scaffold0022 (3-116)||(107506-107620)
[»] scaffold0357 (1 HSPs)
scaffold0357 (66-140)||(5708-5782)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-42)||(3876-3917)
[»] scaffold0013 (1 HSPs)
scaffold0013 (24-114)||(33415-33503)
[»] scaffold0808 (1 HSPs)
scaffold0808 (67-139)||(5326-5398)
[»] scaffold0601 (1 HSPs)
scaffold0601 (98-172)||(3461-3537)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-40)||(12684-12724)


Alignment Details
Target: scaffold0133 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 3941 - 3699
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  3941 cgataaaacacgcgaataatataatattcaagaaatagacgtcacgtcatcaacaaaatcctaaa-caacatgcatgtataaaaattctcaacagttgca 3843  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3842 gcagatataaaccatacacctcaaaagtatacatgtcatgagatcgaatacatcatcataaaattctccaaaacataaataaatccaggatagacaatct 3743  T
Q  201 ataataaatcataagacaacatcttagatcagagcctatgctac 244  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  3742 ataataaatcataagacaacatcctagatcagagcctatcctac 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 13449272 - 13449035
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13449272 cgataaaacacgcgaataatataatattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgca 13449174  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  13449173 gcggatataaactatacacctcaaaagtatacatgtcatgagatcgaatacatcatcataaaattctccaaaacataaatgaattcaggatagacaatct 13449074  T
Q  201 ataataaatcataagacaacatcttagatcagagcctat 239  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  13449073 ataataaatcataagacaacatcctagatcagagcctat 13449035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 5407087 - 5407301
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||||||||| |||||||| |||||||  |||||||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||||||||    
T  5407087 gataaaacacgcgagtaatataaatattcaagtaatagacgccacgtcttcaataaaatccaaaa-caacatgcatgtataaatattctcaacagttgca 5407185  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||    
T  5407186 gcggatataaaccatacacctcaaa-gtatacatgccatgagatcaaatacatcatcatcaaactctccaaaacataaatacatccaggatagacaatct 5407284  T
Q  201 ataataaatcataagac 217  Q
    |  ||||||||||||||    
T  5407285 aagataaatcataagac 5407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 47470593 - 47470431
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| |||||  |||||||| | ||||||||||||||||||| |||    
T  47470593 gataaaacacgcgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaaccaaat-caacatgcatatataaaaattctcaacagtcgca 47470495  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||    
T  47470494 gcggatataaaccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaa 47470431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18241447 - 18241313
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||| ||||||||||| || |||| |||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  18241447 cgataaaacacgtgaataatataaatagtcaagaaatagacgctacatcatcaacaaaatcgaaaa-caacatgcatgtataaaaattctcaacagttgc 18241349  T
Q  100 agcggatataaaccatacacctcaaaagtatacatg 135  Q
    |||||||||||| |||| |  ||||||| |||||||    
T  18241348 agcggatataaatcatataattcaaaagcatacatg 18241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 41258639 - 41258480
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtat-aaaaattctcaacagtt 97  Q
    |||||||||||||||||| || | |||||||| |||||||||| ||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||     
T  41258639 cgataaaacacgcgaatagtacatatattcaagaaatagacgctacatcatcatacaaaatccaaaa-caacatgcatgtattaaaaattctcaacagtc 41258541  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcat 159  Q
    ||||||||||||||||||| || ||||||  ||||||| ||||  ||| ||||||| |||||    
T  41258540 gcagcggatataaaccatatacttcaaaa-catacatgccatgatatcaaatacataatcat 41258480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 10239698 - 10239562
Alignment:
Q  3 ataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||  | |||| |  ||| || | ||||||||||||  || |||||||    
T  10239698 ataaaacacgcgaataatataaatatccaagaaatagacgccacatcatcaacaatgttcaaata--acaagcatatataaaaattctataccgttgcag 10239601  T
Q  102 cggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  10239600 cggatataaaccatacacttcaaaagtatacatgccatg 10239562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 13596279 - 13596107
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||| || ||||||||||||||||||  ||||| || | |||||||||| |||||||||||    
T  13596279 cgataaaacacgcgaatcatataaatattcaagaaatcgacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattttcaacagttgc 13596182  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    | |||||||| | |||||| ||| ||||| |||||| |||| ||||  |||||| |||||| |||||||||||||    
T  13596181 atcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacaacatcataaaaattctccaaa 13596107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19557247 - 19557417
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||  ||||||||||| ||||||| ||||||||||||  ||||||||||||||   |||||||| || |  || ||||||||||||| ||||    
T  19557247 cgataaaacacatgaataatataaatattcaagaaatagacgccatgtcatcaacaaaatc--taaacaacaggcatacat-aaaattctcaacaattgc 19557343  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||||||||||||||||||||| ||||||||||||  ||| ||||  ||||||||||||| |||||||||||||    
T  19557344 agcggatataaaccatacacctc-aaagtatacatgctatgagatcaaaatacatcatcataaaaattctccaaa 19557417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 50224416 - 50224243
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||| || ||||| | | | |||  || || || | |||| |||||||||||||||||    
T  50224416 cgataaaacacgcgaataataaaaatattcaagaaatagacgccacgtcgtcaactataacgaaat-catcaagcatatatataaattctcaacagttgc 50224318  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||||||||||| |||||||||||||||||||||  |||| ||||  ||||||||| ||| |||||||||||||    
T  50224317 agcggatataaacaatacacctcaaaagtatacataccatgagatcaaaatacatcaacataaaaattctccaaa 50224243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41919507 - 41919349
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||| || || ||||||||||||||||||  ||||| || | ||||||| ||||||| ||||||    
T  41919507 cgataaaacacgcgaataatataaatattcaagaaatagatgctacgtcatcaacaaaatccaaa--caacaggcatatataaaa-ttctcaaaagttgc 41919411  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata 160  Q
    || ||||||| | |||||| ||| ||| |||| |||||||  |||| | |||||||||||||    
T  41919410 agtggatatagatcatacatctccaaaatatagatgtcataagatcaatatacatcatcata 41919349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 14569320 - 14569456
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||| |||| |||||||||||| ||||||| |||||||||| || || |||||||| ||   ||||||||||| | ||||||| ||||||||||| ||    
T  14569320 cgataatacacacgaataatataaatattcaagaaatagacgctacgtcttcaacaaattc---aaacaacatgcatatataaaatttctcaacagtcgc 14569416  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    |||| ||||||| |||||| ||| ||| ||||||||||||    
T  14569417 agcgaatataaatcatacatctccaaaatatacatgtcat 14569456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12729321 - 12729428
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| |||| || |||||||||| || || ||||||||| | |||| |||||||| | ||||||||||||||||||| ||    
T  12729321 cgataaaacacgcgaataatataaatatttaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattctcaacagtcgc 12729419  T
Q  100 agcggatat 108  Q
    |||||||||    
T  12729420 agcggatat 12729428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 5373351 - 5373203
Alignment:
Q  24 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 123  Q
    |||||||| ||| |||||| || || ||||||||| ||||| | | ||||| | |||||||||||||||| || |||||||||||||| |||||  |||     
T  5373351 atattcaaaaaacagacgctacgtcttcaacaaaa-ccaaacata-catgcatatataaaaattctcaacggtcgcagcggatataaatcatacttctcc 5373254  T
Q  124 aaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    ||| ||||||||||||| ||||  |||||||||||||| ||||||||||||    
T  5373253 aaaatatacatgtcatgagatcaaaatacatcatcatataaattctccaaa 5373203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 42706699 - 42706826
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatc--aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || |||||  | |||||||||||| |||||||| || ||| ||| ||||| ||||     
T  42706699 cgataaaacacgcgaataataaatatattcaagaaatagacgctacgtcatcgaaccaaaatccaaaatcaacatgcatgcatagaaa-tctcatcagtc 42706797  T
Q  98 gcagcggatataaaccatacacctcaaaa 126  Q
    |||||||||||||| |||| || ||||||    
T  42706798 gcagcggatataaatcatatacttcaaaa 42706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 12136481 - 12136371
Alignment:
Q  63 aaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata- 160  Q
    |||||||||||| | ||||||| | ||||||||| |||  | ||||||| |||||| ||| ||||||||||||||||| ||||  ||||||||||||||     
T  12136481 aaaacaacatgcatatataaaagtcctcaacagtcgcaatgtatataaatcatacatctccaaagtatacatgtcatgagatcaaaatacatcatcatat 12136382  T
Q  161 aaattctccaa 171  Q
    |||||||||||    
T  12136381 aaattctccaa 12136371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 18274726 - 18274837
Alignment:
Q  2 gataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||| |||| | |||||||| ||||||| || || ||||||| ||||||||||||  ||||||| ||||||||||| ||||||||| ||    
T  18274726 gataaaacacgcgaacaatacatatattcaagaaatagatgctacgtcatcaaacaaaatccaaaat-aacatgcatgtataaaaat-ctcaacagtcgc 18274823  T
Q  100 agcggatataaacc 113  Q
    || |||||||||||    
T  18274824 agtggatataaacc 18274837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 54366306 - 54366182
Alignment:
Q  3 ataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||   | |||||||| |||||||||| || || ||||||||| | |||| |||||||| | ||||||||||||||||||| | ||    
T  54366306 ataaaacacgcgaataaagcatatattcaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattctcaacagtcgtag 54366208  T
Q  102 cggatataaaccatacacctcaaaag 127  Q
    |||||||| | |||||| ||| ||||    
T  54366207 cggatatagatcatacatctctaaag 54366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 12246471 - 12246382
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    |||||||| |||||||||| || |||||| ||||||| ||||  |||||||| || ||||||  |||||||||| |||||||||||||||||    
T  12246471 atattcaagaaatagacgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaa--tctcaacagtcgcagcggatataaacca 12246382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 7188185 - 7188063
Alignment:
Q  4 taaaacacgcgaataatataa-tattcaataaatagacgccacatcatc-aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||| ||||||| |  ||||||| |||||||||  || ||||| |||||||||||||| |||||||| || ||||||| ||||| ||||  |||    
T  7188185 taaaacacgcaaataatacatgtattcaagaaatagacgttacgtcatcgaacaaaatccaaaatcaacatgcatgcataaaaa-tctcatcagtcacag 7188087  T
Q  102 cggatataaaccatacacctcaaa 125  Q
    |||||||||| |||| || |||||    
T  7188086 cggatataaagcatatacttcaaa 7188063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41168175 - 41168061
Alignment:
Q  1 cgataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||| ||||||   ||| |||||| |||||||||| || |||||| | ||||||||||  |||||||| |||||||||| ||| |||||| |    
T  41168175 cgataaaacacgtgaataaggcaattattcaagaaatagacgctacgtcatcatagaaaatccaaattcaacatgcatgtataaaaa-tcttaacagtcg 41168077  T
Q  99 cagcggatataaacca 114  Q
    ||| ||||||||||||    
T  41168076 cagtggatataaacca 41168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 19624229 - 19624119
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-a 161  Q
    ||||||||||| | ||||||| |  |||||||| |||| ||||||||| |||||| ||| ||| ||||||||||||  |||| | ||||||||||||| |    
T  19624229 aaacaacatgcatatataaaattcatcaacagtcgcagtggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcatata 19624130  T
Q  162 aattctccaaa 172  Q
    || ||||||||    
T  19624129 aaatctccaaa 19624119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 13815097 - 13814990
Alignment:
Q  8 acacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcgga 105  Q
    |||||||||||||| | | |||||| ||| ||| || || |||||| ||||||| ||||  |||||||| || |||| ||| ||||||||||||||||||    
T  13815097 acacgcgaataatacatttattcaagaaacagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataataat-ctcaacagttgcagcgga 13814999  T
Q  106 tataaacca 114  Q
    |||||||||    
T  13814998 tataaacca 13814990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 15116536 - 15116449
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 112  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||    
T  15116536 tattcaagaaatagatgctacgtcatcagacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaac 15116449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15853542 - 15853428
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||| |||||||||  || |||||||| ||||||| || || |||||| ||||||| |||    ||||||| || |||||||| ||||||||| |    
T  15853542 cgataaaactcgcgaataaagtatatattcaagaaatagatgctacgtcatcatacaaaattcaactttaacatgcatgcataaaaat-ctcaacagtcg 15853444  T
Q  99 cagcggatataaacca 114  Q
    ||||||||||||||||    
T  15853443 cagcggatataaacca 15853428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 17194627 - 17194572
Alignment:
Q  81 aaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgt 136  Q
    |||||||||||||||| | |||||||||||| |||||| | | |||||||||||||    
T  17194627 aaaaattctcaacagtcgtagcggatataaatcatacatcactaaagtatacatgt 17194572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 38762695 - 38762832
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||| |||||||| |||||| ||||||| |||||| || ||| |||   |||||||||||||  ||||||| ||| ||||| |||| ||||||  |     
T  38762695 gataaaatacgcgaatgatataaatattcaagaaatagtcgtcacgtcaatcacaaaatccaaaat-aacatgcatgtgtaaaa-ttcttaacagtcacg 38762792  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||| | | |||||| |||||| ||||||||||||||    
T  38762793 gcggataaagatcatacatctcaaaggtatacatgtcatg 38762832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 47470401 - 47470328
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagccta 238  Q
    |||||| |||||||||||||||||  |  |||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  47470401 tctccacaacataaataaatccagagtaaacaatctagaat-aatcataagacagacatcctagatcagagccta 47470328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 17378371 - 17378286
Alignment:
Q  81 aaaaattc-tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcataaaat 164  Q
    |||||||| |||| ||| |||||||||||||| |||||| ||| ||| ||||||||||||  |||| | |||||||| ||||||||    
T  17378371 aaaaattcatcaatagtcgcagcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcaacataaaat 17378286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 27958968 - 27959080
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| |||||||||| || |||||| ||||||| ||||  || ||||| || ||| | || ||||||||| |||    
T  27958968 ataaaacatgcgaataatacatttattcaagaaatagacgctacgtcatcatacaaaattcaaattcatcatgcatgcatatagat-ctcaacagtcgca 27959066  T
Q  101 gcggatataaacca 114  Q
    ||||||||||||||    
T  27959067 gcggatataaacca 27959080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 41919315 - 41919243
Alignment:
Q  167 tccaaaacataaataaatccaggatggacaatctataataaatcat-aagaca-acatcttagatcagagccta 238  Q
    |||| ||||||||||||||||| ||  |||||||| ||| |||||| |||||| ||||||||||||||||||||    
T  41919315 tccacaacataaataaatccagaataaacaatctagaat-aatcataaagacatacatcttagatcagagccta 41919243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 35838 - 36070
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  35838 cgataaaacacgcgaataatataatattcaagaaatagacgccacatcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgca 35936  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  35937 gcggatataaaccatacacctcaaaagtatacatgacatgagatcgaata-atcatcataaaattctccaaaacataaataaattcaggatagacaatct 36035  T
Q  201 ataataaatcataagacaacatcttagatcagagc 235  Q
    ||||||||||| |||| |||||| ||| |||||||    
T  36036 ataataaatcaaaagataacatcctagttcagagc 36070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 19670450 - 19670693
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  19670450 cgataaaacacgcgaataatataatattcaagaaatagacgccagatcatcaacaaaatccaaaa-caacatgcatatataaaaattctcaacagttgca 19670548  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcat-aaaattctccaaaacataaataaatccaggatggacaatc 199  Q
    |||||||||||||||||||||| |||| ||||||| || | |||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  19670549 gcggatataaaccatacacctccaaagcatacatgccaagagatcgaatacatcatcataaaaattctccaaaacataaatagatccaggatagacaatc 19670648  T
Q  200 tataataaatcataagacaacatcttagatcagagcctatgctac 244  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||    
T  19670649 tataataaatcataagacaacatcctagatcagagtctatcctac 19670693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31469771 - 31469543
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  31469771 cgataaaacacgcgaataatataatattcaagaaatagacgccacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacggttgca 31469673  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    ||||||||||| |||||||||| |  ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  31469672 gcggatataaatcatacacctcgac-gtatagatgtcatgagatcaaatacatcatcataaaattctccaaaacataaataaatccaggatagacaattt 31469574  T
Q  201 ataataaatcataagacaacatcttagatcag 232  Q
    ||||| ||||||||| ||||||| ||||||||    
T  31469573 ataat-aatcataaggcaacatcctagatcag 31469543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15006889 - 15006727
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | |||||||||||| |||||||||    
T  15006889 cgataaaacacgggaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattcttaacagttgc 15006792  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||||  |||||| ||||||||||    
T  15006791 agcggatataaaccatacaccttaaaagtctacatgccatgagatcaaaatacaacatcataaaa 15006727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34964846 - 34965008
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| ||||||  ||||| || | | ||||||||||||||| ||||    
T  34964846 cgataaaacacgcgaataatataaatattcaaaaaatagacgcctcgtcatcaacaaagtccaaa--caacaggcatatttaaaaattctcaacatttgc 34964943  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    ||| |||||||||||||||||| ||||||||||||| |||| ||||  |||||||||||||||||    
T  34964944 agcagatataaaccatacacctaaaaagtatacatgccatgagatcaaaatacatcatcataaaa 34965008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22595920 - 22595747
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||| || || ||||||||| | |||  |||||||| | ||||||| ||||||||||| ||    
T  22595920 cgataaaacacgcgaataatataaatattcaagaaatagacgctacgtcttcaacaaaaactaaat-caacatgcatatataaaatttctcaacagtcgc 22595822  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    ||| |||||||| |||||| ||| ||||||||||||||||| ||||  |||||||||||||| ||||||||||||    
T  22595821 agcagatataaatcatacatctccaaagtatacatgtcatgtgatcaaaatacatcatcatataaattctccaaa 22595747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 12311263 - 12311139
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || | ||||||||||||||||  |||||||| ||||||||||||||||||||| ||    
T  12311263 cgataaaacacgcgaataatacatatattcaagaaatagacgctacgttatcaacaaaatccaaag-caacatgcatgtataaaaattctcaacagtcgc 12311165  T
Q  100 agcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||| || |||||    
T  12311164 agcggatataaaccatatacttcaaa 12311139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29163175 - 29163018
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||| |||||| |||| ||||||| |||||||||| ||||||||||||||| ||||||  |||||||| | |||||||||||||||||||      
T  29163175 cgataaaacacgtgaataacataaatattcaagaaatagacgctacatcatcaacaaaaatccaaa--caacatgcatatataaaaattctcaacagtca 29163078  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatc 157  Q
    ||||||||||| | |||||| ||| ||||||||||||||||| ||||  |||||||||||    
T  29163077 cagcggatatagatcatacatctccaaagtatacatgtcatgagatcaaaatacatcatc 29163018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29603489 - 29603628
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||| || |||||||||||| ||||||| ||||||||| ||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||| |     
T  29603489 cgataaaatacacgaataatataaatattcaagaaatagacgtcacgtcatcaaaaaaatccaaaa-caacatgcatgtataaaaattctcaacagtcgt 29603587  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||||||||  | || || ||||||||||||    
T  29603588 agcggatataaaccatacaatttaagagcatacatgtcatg 29603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 19852218 - 19852331
Alignment:
Q  5 aaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcg 103  Q
    ||||||| |||||||||||| |||| || ||||||||||||  ||||||||||||||||||  |||||||  ||||||||||||||||||| ||||||||    
T  19852218 aaaacacacgaataatataaatatttaagaaatagacgccatgtcatcaacaaaatccaaac-caacatgaatgtataaaaattctcaacaattgcagcg 19852316  T
Q  104 gatataaaccataca 118  Q
    |||||||||||||||    
T  19852317 gatataaaccataca 19852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22846037 - 22846174
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||| |||||||||||||| ||||||| ||||| |||| || ||||||| ||||  | |||||||||||| ||||||||| ||||||| ||| ||    
T  22846037 cgataaaacccgcgaataatataaatattcaagaaataaacgctacgtcatcaaaaaaaatccaaaacaacatgcatgtataaaa-ttctcaatagtcgc 22846135  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||||||||||||| || ||  ||| ||||||||||||    
T  22846136 agcggatataaaccatatacatc--aagcatacatgtcatg 22846174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17085808 - 17085670
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcat-caacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||  || |||| ||||||||||| |||| ||||||| |||||||||| |||||||||| |    
T  17085808 cgataaaacacgcgaataataaatatattcaagaaatagacgttacgtcatccaacaaaatcc-aaaataacatgcatgtataaaaa-tctcaacagtcg 17085711  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||||| ||| |||| || || ||| |||||||||||||    
T  17085710 cagcggatacaaatcatatacttc-aaattatacatgtcatg 17085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 23218920 - 23219083
Alignment:
Q  25 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaa 124  Q
    ||||||| |||||||||| || ||  ||| |||| |||||  |||||||| | || |||||||||||||||| |||||||||||||| |||||  ||| |    
T  23218920 tattcaagaaatagacgctacgtctacaataaaaaccaaat-caacatgcatatagaaaaattctcaacagtcgcagcggatataaatcatacgtctcca 23219018  T
Q  125 aagtatacatgtcatgggatcga-atacatcatcata-aaattctccaaaacataaataaatccag 188  Q
    || ||||||||||||  |||| | ||||||||||||| ||| |||||| |||||||||||||||||    
T  23219019 aa-tatacatgtcataagatcaatatacatcatcatataaaatctccataacataaataaatccag 23219083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 17858625 - 17858490
Alignment:
Q  3 ataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaa-atccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||| || ||||||| ||||| | || || ||  ||||||| |||   ||||||||||| | ||||||||||||||||||| |||    
T  17858625 ataaaacacgcgaataatacaaatattcaagaaatacatgctacgtctgcaacaaatatc---aaacaacatgcatttataaaaattctcaacagtcgca 17858529  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    ||||||||||| |||||| | | || |||||||||||||    
T  17858528 gcggatataaatcatacatcaccaaggtatacatgtcat 17858490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 16373901 - 16374039
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||| || ||||||| || ||||||  || || |||||||| |||||||  ||||||| | ||||||| | ||||| ||| ||    
T  16373901 cgataaaacacgcgaataatacaaatattcaagaattagacgtgacgtcttcaacaaattccaaaat-aacatgcatatataaaattcctcaaaagtcgc 16373999  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    |||||||||||| |||||| ||| ||| |||| |||||||    
T  16374000 agcggatataaaacatacatctccaaaatatatatgtcat 16374039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16890067 - 16889924
Alignment:
Q  1 cgataaaacacgcgaataata----taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacag 95  Q
    |||||||||||||||||||||    || ||||||| |||||||||  || |||||| ||||||| ||||  |||||||| || |||||| | ||||||||    
T  16890067 cgataaaacacgcgaataataaatatattattcaagaaatagacgttacgtcatcatacaaaattcaaattcaacatgcatgcataaaagt-ctcaacag 16889969  T
Q  96 ttgcagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    | ||||||||||||||||||| |  || |||| ||||||||||||    
T  16889968 tcgcagcggatataaaccatataattcgaaagcatacatgtcatg 16889924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 7830145 - 7830056
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| |||||||||| ||||||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  7830145 tattcaagaaatagacgctacatcatcatacaaaattcaaattcaacatgcatgaataaaaat-ctcaacagtcgcagcggatataaacca 7830056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 22468305 - 22468195
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aa 161  Q
    |||||||| || | |||||||||||||||||||||||||||||||| | ||| || ||| ||||| |||||| |||| ||||  |||||| |||||| ||    
T  22468305 aaacaacaggcatatataaaaattctcaacagttgcagcggatatagatcatgcatctctaaagtctacatggcatgagatcaaaatacaacatcataaa 22468206  T
Q  162 aattctccaaa 172  Q
    |||||||||||    
T  22468205 aattctccaaa 22468195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6092443 - 6092558
Alignment:
Q  1 cgataaaacacgcgaataata-taatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || |||||||||||   | |||||||||||| || || | ||||||||||||| ||    
T  6092443 cgataaaacacgcgaataataattatattcaagaaatagacgctacgtcatcaacaaaggtc-aaaacaacatgcatgcat-ataattctcaacagtcgc 6092540  T
Q  100 agcgga-tataaaccata 116  Q
    |||||| |||||||||||    
T  6092541 agcggattataaaccata 6092558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 25649170 - 25649283
Alignment:
Q  2 gataaaacacgcgaataatat-aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||| ||||||||||||| ||||||||| ||||||||| ||   ||||||||||| || |||||| ||||| || ||||||| |||||| ||| |||    
T  25649170 gataaaatacgcgaataatataaatattcaagaaatagacgtcatgccatcaacaaaaacc-aaaacaccatgcatgcataaaaa-tctcaatagtcgca 25649267  T
Q  101 gcggatataaaccata 116  Q
    ||||||| ||||||||    
T  25649268 gcggatacaaaccata 25649283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 16131234 - 16131307
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtca 138  Q
    ||||||||||| | ||||||||||||||||||| |||| ||||||||| |||||| ||| ||| |||||||||||    
T  16131234 aaacaacatgcatatataaaaattctcaacagtcgcaggggatataaatcatacatctccaaa-tatacatgtca 16131307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23025096 - 23025032
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaa 65  Q
    |||||||||||||||||||||||||||| || || |||||| ||| || |||| |||||||||||    
T  23025096 cgataaaacacgcgaataatataatattaaagaattagacgtcacgtcttcaataaaatccaaaa 23025032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 21927475 - 21927385
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    |||||||| |||||||||| || |||||| |||||||  |||  | |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  21927475 atattcaagaaatagacgctacgtcatcatacaaaatttaaattcgacatgcatgtataaaaat-ctcaacaattgcagcggatataaacca 21927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 25369697 - 25369583
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| |  || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| |||    
T  25369697 ataaaacatgcgaataatacatttattcaagaaatagatgatacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgca 25369599  T
Q  101 gcggatataaaccata 116  Q
    ||||||||||||||||    
T  25369598 gcggatataaaccata 25369583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 33540490 - 33540377
Alignment:
Q  2 gataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||| | |||||||| | |||||||| ||||||| |  |  ||||||||||||||||||| | | |||| ||||||| | |||||||| ||||||    
T  33540490 gataaaacatgtgaataatacatatattcaagaaatagatgttatgtcatcaacaaaatccaaaa-cgatatgcatgtataaca-ttctcaacggttgca 33540393  T
Q  101 gcggatataaaccata 116  Q
    ||||||||||||||||    
T  33540392 gcggatataaaccata 33540377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 941291 - 941177
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||| ||||||||||||| ||||||| || || |||| || |||||| ||||||  ||||| |||| ||| ||||||||  ||||||||||  |    
T  941291 cgataaaacatgcgaataatataaatattcaagaattatacgctacgtcatcatacaaaaatcaaaa-caacgtgcatgtataaa--ttctcaacagccg 941195  T
Q  99 cagcggatataaaccata 116  Q
    ||||||||||||||||||    
T  941194 cagcggatataaaccata 941177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 22364491 - 22364380
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||  | |||||||| |||||||||| |  |||||| ||||||| ||||  |||||||| || | |||||| ||||||||| ||||    
T  22364491 taaaacacgcgaataatgcatatattcaagaaatagacgctaggtcatcatacaaaattcaaattcaacatgcatgcacaaaaat-ctcaacagtcgcag 22364393  T
Q  102 cggatataaacca 114  Q
    |||||||| ||||    
T  22364392 cggatatatacca 22364380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 21411631 - 21411542
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| ||| ||||| |||||||||||||||||    
T  21411631 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctctacagtcgcagcggatataaacca 21411542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 25917604 - 25917711
Alignment:
Q  2 gataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||| | |||||||| || ||||||| || |||||| |||||||   |||||||  ||| || ||||||  |||||||||| ||    
T  25917604 gataaaacacgcgaataataaatatattcaagaattagacgctacgtcatcatacaaaatttcaaaacaatgtgcatgcataaaa--tctcaacagtcgc 25917701  T
Q  100 agcggatata 109  Q
    ||||||||||    
T  25917702 agcggatata 25917711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21621041 - 21621147
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||| ||||||||| | | ||||| || |||||||||  || |||||| |||||||| |||| |||||||| |||||||||| |||| ||||| |    
T  21621041 cgataaaactcgcgaataaaacatatatttaagaaatagacgttacgtcatcatacaaaatctaaaa-caacatgcatgtataaaaa-tctcgacagtcg 21621138  T
Q  99 cagcggata 107  Q
    |||||||||    
T  21621139 cagcggata 21621147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 141513 - 141270
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||  || |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  141513 cgataaaacacgtgaataatataatattcaagaaatagatgccaggtcctcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgca 141415  T
Q  101 gcggatataaacca-tacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatc 199  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  141414 gcggatataaaccaatacacctcaaaagtatacatgtaatgagattgaatacatcatcataaaattctccaaaacataaataaatctaggatagacaatc 141315  T
Q  200 tataataaatcataagacaacatcttagatcagagcctatgctac 244  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  141314 tataataaatcataagacaacattctagatcagagcctatcctac 141270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 20060 - 20302
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  20060 cgataaaaaacgcgaataatataatattcaagaaatagacgtcacgtcatgaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgca 20158  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    ||  ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  20159 gcaaatataaatcatacacctcaaaagtatacatgacatgagatcgaatacatcatcataaaattctccaaaacataaataaatccaggatagacaatcc 20258  T
Q  201 ataataaatcataagacaacatcttagatcagagcctatgctac 244  Q
    |||||| |||||||||||||||| ||| ||||||||||| ||||    
T  20259 ataatagatcataagacaacatcctaggtcagagcctatcctac 20302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 28388379 - 28388621
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||  || |||| | ||||||||||||||| |||||||    
T  28388379 cgataaaacacgcgaataatataatattcaagaaatagacgccacgtcctcaacaaaatccaaaat-aatatgcatctataaaaattctcaatagttgca 28388477  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    ||||||||||| |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  28388478 gcggatataaatcatacacctcaagagtatacatgccatgagatcgaatacatcatcataaaattctccaatacataaataaatccaggatagacaatct 28388577  T
Q  201 ataataaatcataagacaacatcttagatcagagcctatgctac 244  Q
    ||||||| ||||||||||||||| ||||||| || |||| ||||    
T  28388578 ataataagtcataagacaacatcctagatcatagtctatcctac 28388621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 18921313 - 18921082
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||              |||| |||||||||| ||||||||||||||||||||| ||    
T  18921313 cgataaaacacgcgaataatataaatattcaagaaatagacgccac-------------gccaacaacaacatgcatgtataaaaattctcaacagtcgc 18921227  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatc 199  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  18921226 agcggatataaaccatacacctcaaaattatacatgtcatgagatcaaatacatcaacataaaatcctccaaaacataaataaatccaggatagacaatc 18921127  T
Q  200 tataataaatcataagacaacatcttagatcagagcctatgctac 244  Q
    ||||||||||| |||||||| ||| ||||||||||||||| ||||    
T  18921126 tataataaatcgtaagacaaaatcctagatcagagcctatcctac 18921082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 17948285 - 17948113
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||  |||||||| | ||||||||||||||||||||||    
T  17948285 cgataaaacacgcgaataatataaatattcaagaaatagacgctacatcatcaacaaaatccaaa--caacatgcatatataaaaattctcaacagttgc 17948188  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||  ||||||||||||| |||||||||||||    
T  17948187 agcggatataaatcatacacctcaaaagtatacatgacatgagatcaaaatacatcatcataaaaattctccaaa 17948113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21677755 - 21677569
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||||||| |   || || | ||||| ||||||||||||||||    
T  21677755 cgataaaacacgcgaataatataaatattcaagaaatagacgccacgccatcaacaaaatccaaatat--caggcatatataagaattctcaacagttgc 21677658  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcata-aaattctccaaaacataaataaatccag 188  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||||| |||||||||  |||||||||||||||||    
T  21677657 agcggatataaaccatacacctc-aaagtatacatgccatgagatcaaatacatcatcatagaaattctcctcaacataaataaatccag 21677569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 4482185 - 4482355
Alignment:
Q  4 taaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 102  Q
    |||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||||||    
T  4482185 taaaacacacgaataatataaatattcaaaaaatagacgccacatcatcaacaaaatccaaaa-caacatgcatgtataaaaaatttcaacagttgcagc 4482283  T
Q  103 ggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcataaaa-ttctccaaa 172  Q
    |||||||||||||| || | ||||| ||||||| ||||  ||| | ||||| |||||||||| |||||||||    
T  4482284 ggatataaaccatatactttaaaagcatacatgccatgaaatcaagatacaacatcataaaagttctccaaa 4482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 28717959 - 28718097
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||  | ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||    
T  28717959 cgataaaacacgcgaatgatataaatattcaagaaatagacgccatgttatcgacaaaatccaaaa-caacatgcatttataaaaattctcaacagtcgc 28718057  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  28718058 agtggatataaaccatacacctccaaagtatacatgtcat 28718097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31499159 - 31499300
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||| || ||||||||  ||||||||||||  ||||||| |||||||||||||| ||||||     
T  31499159 cgataaaacacgcgaataatataaatattcaagaaatagacgtcatatcatcaattcaaaatccaaaat-aacatgcatgtataaaaattcttaacagtc 31499257  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  31499258 gcagcggatataaatcatacacctcaaaagtatgcatgtcatg 31499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 20587879 - 20587746
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||| ||||||||| ||||||||  ||| || |||||||||||||||| |||||||| ||||||||||||||||||||  ||    
T  20587879 cgataaaacacgcgaataatatgaatattcaagaaatagacatcacgtcttcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagacgc 20587781  T
Q  100 agcggatataaaccatacacctcaaaagtatacat 134  Q
    | || ||||||||||||||||||||||||||||||    
T  20587780 aacgaatataaaccatacacctcaaaagtatacat 20587746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9323317 - 9323155
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||  ||||||||| |||||||||| || |||||||||| | | |||| ||  |  | | |||||||||| ||||||||||||    
T  9323317 cgataaaacacgcgaataattgaatattcaagaaatagacgctacgtcatcaacaataac-aaaatcatgagacatatataaaaattatcaacagttgca 9323219  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||| |||||||    
T  9323218 gcggatataaaccatacacctcaaaagtatacatgccatgagatcaaaatacatcaacataaaa 9323155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33555588 - 33555728
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||||| ||||||||||||||| ||||||| |||||||| |||| ||||| |  |||||||  ||||||||| || | |||||||| ||||||||||     
T  33555588 cgataaaaaacgcgaataatataaatattcaagaaatagacaccacgtcatcgattcaaaatc--aaaacaacaggcatatataaaaactctcaacagtc 33555685  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    
T  33555686 gcagcgggtataaaccatacacctcaaaagtatacatgccatg 33555728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 9640966 - 9641138
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||| || ||||||||||||||||||  ||||| || | |||||||||| |||||||||||    
T  9640966 cgataaaacacgcgaatcatataaatattcaagaaatcgacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattttcaacagttgc 9641063  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    | |||||||| | |||||| ||| ||||| |||||| |||| ||||  |||||| |||||| |||||||||||||    
T  9641064 atcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacaacatcataaaaattctccaaa 9641138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 17922962 - 17923073
Alignment:
Q  63 aaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata- 160  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| ||| ||||||||||||||||| ||||  ||||||||||||||     
T  17922962 aaaacaacatgcatgtataaaaattttcaacagtcgcagcggatataaatcatacatctctaaagtatacatgtcatgagatcaaaatacatcatcatat 17923061  T
Q  161 aaattctccaaa 172  Q
    ||||||||||||    
T  17923062 aaattctccaaa 17923073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14938622 - 14938761
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| |||| || ||||||  | ||| ||||||||||||| ||||| |||||||| ||||||||||||| ||||||| ||    
T  14938622 cgataaaacacgcgaataatataaatatttaagaaatagtagtcacgtcatcaacaaaattcaaaa-caacatgcatgtataaaaattcccaacagtcgc 14938720  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||| ||| | | |||||| |||||||||||||||| ||||    
T  14938721 agcgaataaagatcatacatctcaaaagtatacatgccatg 14938761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 15366215 - 15366354
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| |||| || ||||||  | ||| ||||||||||||| ||||| |||||||| ||||||||||||| ||||||| ||    
T  15366215 cgataaaacacgcgaataatataaatatttaagaaatagtagtcacgtcatcaacaaaattcaaaa-caacatgcatgtataaaaattcccaacagtcgc 15366313  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||| ||| | | |||||| |||||||||||||||| ||||    
T  15366314 agcgaataaagatcatacatctcaaaagtatacatgccatg 15366354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 39294412 - 39294252
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||| |||||||||||| ||||||| |||||||||| || ||  ||| ||||  ||||  |||||||| | ||||||||||||||||||| ||    
T  39294412 cgataaaacacacgaataatataaatattcaagaaatagacgctacgtctacaataaaaatcaaat-caacatgcatatataaaaattctcaacagtcgc 39294314  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 160  Q
    |||||||||||| ||||||  || |||||||||||| |||| ||||  ||||||||||||||    
T  39294313 agcggatataaatcatacatatccaaagtatacatgccatgagatcaaaatacatcatcata 39294252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16381827 - 16381969
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| |||| || ||||||| | ||| | ||||||||||||||||  ||||| || | || |||| || |||||||||||    
T  16381827 cgataaaacacgcgaataatataaatatttaagaaatagatgtcacgttatcaacaaaatccaaa--caacaggcatatagaaaatttttcaacagttgc 16381924  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc 145  Q
    || ||||||||||||||||| || |||||||||||| |||| ||||    
T  16381925 agtggatataaaccatacacttc-aaagtatacatgccatgagatc 16381969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34243399 - 34243274
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||| ||| |||||||||| || ||||||| |||||||||||  |||||||| ||||||||||| ||||||||| |    
T  34243399 cgataaaacacgcgaataatacatatatgcaagaaatagacgctacgtcatcaaacaaaatccaaattcaacatgcatgtataaaaat-ctcaacagtcg 34243301  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    |||| ||||||||||||| || |||||    
T  34243300 cagcagatataaaccatatacttcaaa 34243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 14279161 - 14279038
Alignment:
Q  2 gataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||| | |||||||| |||||||||| || |||| || |||||||||||| |||||||| |||| |||||| ||||||||| ||    
T  14279161 gataaaacacgcgaataatacatatattcaagaaatagacgctacgtcattaaacaaaatccaaaa-caacatgcatgtacaaaaat-ctcaacagtcgc 14279064  T
Q  100 agcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||| || |||||    
T  14279063 agcggatataaaccatatacttcaaa 14279038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 48345502 - 48345640
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||| | ||||||| | |||||||| |||||||||| ||  |||||| |||||||||||| |||||||| ||||||||||| ||||||||| |    
T  48345502 cgataaaacacacaaataatacatatattcaagaaatagacgctacgccatcaaacaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcg 48345599  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||||||| || || |||| ||||||||||||    
T  48345600 cagcggatataaaccatatacttc-aaagcatacatgtcatg 48345640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9058879 - 9058754
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||||||||||||||||| ||||| || |||||||||| || || ||| ||||||||||||| |||||||| ||||||||| ||||||||||| |    
T  9058879 cgatcaaacacgcgaataatatatatatttaagaaatagacgctacgtcttcatacaaaatccaaaa-caacatgcatgtataaaa-ttctcaacagtcg 9058782  T
Q  99 cagcggatataaaccatacacctcaaaa 126  Q
    || ||||||||||||||| || ||||||    
T  9058781 catcggatataaaccatatacttcaaaa 9058754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 12245608 - 12245778
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaacaaa-atccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||| | | | ||||||||||||||||  || || |||||||| |||   ||||||||||| | ||||||| ||||||||||| |||    
T  12245608 ataaaacacgcgaataaaacatttattcaataaatagacgttacgtcttcaacaaatatc---aaacaacatgcatatataaaatttctcaacagtcgca 12245704  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-aaattctccaaa 172  Q
    ||||||||||| |||||| ||| ||| ||||||||||||  |||| | ||||||||||||| ||| ||||||||    
T  12245705 gcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcatataaaatctccaaa 12245778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 18081557 - 18081386
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||| ||| | || ||||||||||||||||||  |||||||  | ||||||| ||||||| ||||||    
T  18081557 cgataaaacacgcgaataatataaatattcaagaaattgactctacgtcatcaacaaaatccaaa--caacatgtatatataaaa-ttctcaatagttgc 18081461  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||| | |||||| |||  | || |||||| |||| ||||  |||||| ||||||| ||||||||||||    
T  18081460 agcggatatagatcatacatctcctaggtctacatgccatgagatcaaaatacaacatcatataaattctccaaa 18081386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 9609182 - 9609283
Alignment:
Q  24 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 122  Q
    |||||||| |||||||||| |||||||||| |||||||||||  |||||||| |||||||| || ||||||||| ||||||||||||||||||| || ||    
T  9609182 atattcaagaaatagacgcgacatcatcaaacaaaatccaaattcaacatgcatgtataaatat-ctcaacagtcgcagcggatataaaccatatacttc 9609280  T
Q  123 aaa 125  Q
    |||    
T  9609281 aaa 9609283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 9836754 - 9836855
Alignment:
Q  24 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 122  Q
    |||||||| |||||||||| |||||||||| |||||||||||  |||||||| |||||||| || ||||||||| ||||||||||||||||||| || ||    
T  9836754 atattcaagaaatagacgcgacatcatcaaacaaaatccaaattcaacatgcatgtataaatat-ctcaacagtcgcagcggatataaaccatatacttc 9836852  T
Q  123 aaa 125  Q
    |||    
T  9836853 aaa 9836855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4436799 - 4436936
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaa----aattctcaacag 95  Q
    |||| ||||||||||||| ||||| ||||||| |||||||||| || ||| ||||||||| ||||  ||||| || | ||||||    ||||||||||||    
T  4436799 cgattaaacacgcgaatagtataaatattcaagaaatagacgctacgtcaacaacaaaattcaaa--caacaagcatatataaataataattctcaacag 4436896  T
Q  96 ttgcagcggatataaaccatacacctcaaaagtatacatg 135  Q
    ||||| | |||||||||||||||||||| || ||||||||    
T  4436897 ttgcaacagatataaaccatacacctcacaaatatacatg 4436936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 4444205 - 4444337
Alignment:
Q  6 aaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaa----aattctcaacagttgca 100  Q
    ||||||||||||||||||| ||||||| |||||||||| || ||| ||||||||| ||||  || || || | ||||||    |||||||||||||||||    
T  4444205 aaacacgcgaataatataaatattcaagaaatagacgctacgtcaacaacaaaattcaaa--cagcaagcatatataaataataattctcaacagttgca 4444302  T
Q  101 gcggatataaaccatacacctcaaaagtatacatg 135  Q
    || ||||||||| |||||||||| || ||||||||    
T  4444303 gcagatataaacgatacacctcacaaatatacatg 4444337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 5617373 - 5617484
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||| ||||||| | |||||||| |||||||||| |||||||||| |||||| ||||  |||||||| || |||||||| ||||||||| |||     
T  5617373 taaaacacgctaataatacatatattcaagaaatagacgctacatcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcaa 5617471  T
Q  102 cggatataaacca 114  Q
    |||||||||||||    
T  5617472 cggatataaacca 5617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 16915566 - 16915672
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    ||||||| |||||||||| | |||||||| |||||||||| || |||||  ||||||||||||| |||||||| ||||||||||  ||||||||| ||||    
T  16915566 taaaacatgcgaataatacatatattcaagaaatagacgctacgtcatcttacaaaatccaaaa-caacatgcatgtataaaaaaactcaacagtcgcag 16915664  T
Q  102 cggatata 109  Q
    ||||||||    
T  16915665 cggatata 16915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 3194279 - 3194142
Alignment:
Q  1 cgataaaacacgcgaataata-taatattcaataaatagacgccacatcatcaacaaa-atccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||||  ||||||||| |||||||||| || |  |||||||| |||   ||||||||||| | ||||||||||||||||||| |    
T  3194279 cgataaaacacgcgaataatacaaatattcaaaaaatagacgctacgttttcaacaaatatc---aaacaacatgcatttataaaaattctcaacagtcg 3194183  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    || | |||||||| |||| | | | || |||||||||||||    
T  3194182 caccagatataaatcatatatcaccaatgtatacatgtcat 3194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 16651475 - 16651365
Alignment:
Q  2 gataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||| ||| | |||||| |||||||| | || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| ||    
T  16651475 gataaaacacgcgaataaaatatttattcaagaaatagaccctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgc 16651377  T
Q  100 agcggatataaa 111  Q
    ||||||||||||    
T  16651376 agcggatataaa 16651365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 17625835 - 17625725
Alignment:
Q  2 gataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||| ||| | |||||| |||||||| | || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| ||    
T  17625835 gataaaacacgcgaataaaatatttattcaagaaatagaccctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgc 17625737  T
Q  100 agcggatataaa 111  Q
    ||||||||||||    
T  17625736 agcggatataaa 17625725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 10863154 - 10863065
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| |||||||||| || |||||| ||||||| | ||  |||||||| || |||||||| |||||||||||||||||||||||||||    
T  10863154 tattcaagaaatagacgctacgtcatcatacaaaattccaattcaacatgcatgcataaaaat-ctcaacagttgcagcggatataaacca 10863065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 13460346 - 13460419
Alignment:
Q  65 aacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    |||||||||| | ||||||||||||||||||| |||||||||||||| |||||| | |  |||||||||||||||    
T  13460346 aacaacatgcatttataaaaattctcaacagtcgcagcggatataaatcatacatcac-caagtatacatgtcat 13460419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 15980705 - 15980636
Alignment:
Q  68 aacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtca 138  Q
    ||||||| | ||||||| ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  15980705 aacatgcatatataaaatttctcaacagtcgcagcggatataaatcatacatctcaaaa-tatacatgtca 15980636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 17948087 - 17948021
Alignment:
Q  172 aacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagccta 238  Q
    ||||||||||||||||| ||  |||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  17948087 aacataaataaatccagaataaacaatctagaat-aatcataagacagacatcctagatcagagccta 17948021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 16930198 - 16930097
Alignment:
Q  24 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 122  Q
    |||||||| |||||||||| || ||||||| |||||| ||||  || ||||| || |||||| | ||||||||| |||||| |||||||||||| || ||    
T  16930198 atattcaagaaatagacgctacgtcatcaaacaaaattcaaattcatcatgcatgcataaaact-ctcaacagtcgcagcgtatataaaccatatacttc 16930100  T
Q  123 aaa 125  Q
    |||    
T  16930099 aaa 16930097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 16935581 - 16935480
Alignment:
Q  24 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 122  Q
    |||||||| |||||||||| || ||||||| |||||| ||||  || ||||| || |||||| | ||||||||| |||||| |||||||||||| || ||    
T  16935581 atattcaagaaatagacgctacgtcatcaaacaaaattcaaattcatcatgcatgcataaaact-ctcaacagtcgcagcgtatataaaccatatacttc 16935483  T
Q  123 aaa 125  Q
    |||    
T  16935482 aaa 16935480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 18164127 - 18164361
Alignment:
Q  3 ataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 102  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  18164127 ataaaacacgcgaataatataatattcaagaaatagacgccgcatcttcaacaaaatgcaaaa-caacatgcatgtataaaaattctcaacagttgcagc 18164225  T
Q  103 ggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatctat 202  Q
    ||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||     
T  18164226 ggatataaatcatacacctcaaa-gtatacatgtcatgatatcgaatacatcatcataaaattctccaaaacgtaaatacatccaggatagacaatctaa 18164324  T
Q  203 aataaatcataagaca-acatcttagatcagagcctat 239  Q
     ||||||||||||||| ||| | |||||||||||||||    
T  18164325 gataaatcataagacagaca-cctagatcagagcctat 18164361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 40555289 - 40555461
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| | |||| ||||| || | ||||||||||||||||||||||    
T  40555289 cgataaaacacgcgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaac-aaaatcaacaggcatatataaaaattctcaacagttgc 40555387  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattctccaaa 172  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||| ||||    
T  40555388 agcggatataaaccatacacctcaatagtatacatgtcatgagatcaaaatacatcatcataaaattcttcaaa 40555461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 46143692 - 46143866
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||| |||||| | ||||||||||||||||||||| ||    
T  46143692 cgataaaacacgcgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatccatgtataaaaattctcaacagtcgc 46143790  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaaa 173  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||||| ||||||||||||||    
T  46143791 agcggatataaacgatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcatcaaaattctccaaaa 46143866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 41213917 - 41213746
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||| |||| |||||||||| ||||||| |||||||||| || |||||||||||| |   || |||||||| | ||||||||||||||||||||||    
T  41213917 cgataaaatacgcaaataatataaatattcaagaaatagacgctacgtcatcaacaaaacc---aatcaacatgcatatataaaaattctcaacagttgc 41213821  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatggga-tcgaatacatcatcat-aaaattctccaaa 172  Q
    ||| ||||||||||||||||||||||||||||||||| ||| || |  ||||||||||||| |||||||||||||    
T  41213820 agcagatataaaccatacacctcaaaagtatacatgtaatgagattaaaatacatcatcataaaaattctccaaa 41213746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 5472653 - 5472479
Alignment:
Q  4 taaaacacgcgaataatataa---tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||||   ||||||| |||||||||| || |||||||  |||||||||||| |||||||| ||||||||||||| ||||||| |    
T  5472653 taaaacacgcgaataatataaatatattcaagaaatagacgctacgtcatcaattcaaaatccaaaa-caacatgcatgtataaaaattcccaacagtcg 5472555  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatcg-aatacatcatcata-aaattctccaaa 172  Q
    ||||||||| | | |||||| |||||||||||||||||||||  |||| |||||||||||||| ||||||||||||    
T  5472554 cagcggataaagatcatacatctcaaaagtatacatgtcatgatatcgaaatacatcatcatataaattctccaaa 5472479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 5770455 - 5770283
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||  |||| |||||| ||||||| ||||||||||||| |||||||||| | |||||  |||||||| | ||||||||||||||||||||||    
T  5770455 cgataaaacacatgaatcatataaatattcaagaaatagacgccacgtcatcaacaagaaccaaa--caacatgcttatataaaaattctcaacagttgc 5770358  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||| |||| |||||||||||||||| ||| |||| ||||  |||||| |||||| |||||||||||||    
T  5770357 agcggatatagaccagacacctcaaaagtatatatgccatgagatcaaaatacaacatcataaaaattctccaaa 5770283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 50002205 - 50002066
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||| || ||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||    
T  50002205 cgataaaacacgcgaataatataaatattcaagaaatagtcgtcacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattcccaacagtcgc 50002107  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||| | | |||||| |||||| ||||||||| ||||    
T  50002106 agcggataaatatcatacatctcaaaggtatacatgccatg 50002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29217071 - 29217204
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||| |||| || |||||||||||| |||||| |||||||| ||||||||| ||||||||||||||    
T  29217071 cgataaaacacgcgaataatataaatattcaagaaatatacgctacgtcatcaacaaaaaccaaaa-caacatgcatgtataaaa-ttctcaacagttgc 29217168  T
Q  100 agcggatataaaccatacacctcaaaagtatacatg 135  Q
    ||||||||||||||||| |  ||||||| |||||||    
T  29217169 agcggatataaaccatataattcaaaagcatacatg 29217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 33383841 - 33384008
Alignment:
Q  6 aaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcgg 104  Q
    ||||||||||||||||||| ||||||| |||||||||  || ||||||| ||||||||||  ||||| || | |||||||||||||||||||||||||||    
T  33383841 aaacacgcgaataatataaatattcaagaaatagacgttacgtcatcaagaaaatccaaa--caacaagcatatataaaaattctcaacagttgcagcgg 33383938  T
Q  105 atataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||| | |||||| ||| ||||| ||||||||||| ||||  |||||| |||||| |||||||||||||    
T  33383939 atatagatcatacatctccaaagtctacatgtcatgagatcaaaatacaacatcataaaaattctccaaa 33384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 21041706 - 21041879
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||| |||||| ||  | ||||||||| | |||  |||||||| | ||||||| ||||||||||| ||    
T  21041706 cgataaaacacgcgaataatataaatattcaagaaacagacgctacgccttcaacaaaaactaaat-caacatgcatatataaaatttctcaacagtcgc 21041804  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||||| |||||| ||| ||||||||| ||||||| ||||  |||||||||||||| ||||||||||||    
T  21041805 agcggatataaatcatacatctccaaagtatacttgtcatgtgatcaaaatacatcatcatataaattctccaaa 21041879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 21193075 - 21193200
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || |||||| ||||||| ||||| |||||||| ||||||||||||||||||||| |    
T  21193075 cgataaaacacgcgaataatacatatattcaagaaatagacgctacgtcatcatacaaaattcaaaa-caacatgcatgtataaaaattctcaacagtcg 21193173  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    |||||||||||||||||| || |||||    
T  21193174 cagcggatataaaccatatacttcaaa 21193200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 78751 - 78578
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||||||| ||||||| |||||||| | |  |||||||||||| ||||||  |||||||| | | ||||||||||||||||| |    
T  78751 cgataaaacacgcgaataatataaatattcaagaaatagacactatgtcatcaacaaaaatccaaa--caacatgcatatgtaaaaattctcaacagtgg 78654  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||||||||| | |||||| ||| |||||||||||| |||| ||||  |||||||||||||  ||||||||||||    
T  78653 cagcggatatagatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatgtaaattctccaaa 78578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 52397574 - 52397747
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||  |||||||||||| ||||  | |||||| ||||||||||||||| |||| |||    
T  52397574 cgataaaacacgcgaataatctaaatattcaataaatagacgctacgccatcaacaaaattcaaa--cgacatgcatgtataaaaattctcgacagatgc 52397671  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcat-aaaattctccaaaa 173  Q
    ||| ||||||||||||| |  ||||||| |||||||| |||   || | |||||||||||| ||||||||||||||    
T  52397672 agcagatataaaccatataattcaaaagcatacatgttatgacgtcaacatacatcatcatcaaaattctccaaaa 52397747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 20957288 - 20957176
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||||||  || |||| ||||||||| |||||||||||||    
T  20957288 cgattaaacacgcgaataatacatatattcaagaaatagacgccacatcatcatacaaaatccaaaat-aatatgcatgtataaaa-ttctcaacagttg 20957191  T
Q  99 cagcggatataaacc 113  Q
    ||| |||||||||||    
T  20957190 cagtggatataaacc 20957176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 9293636 - 9293485
Alignment:
Q  23 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 122  Q
    ||||||||| |||||||||| |  |||||||||||| | |||  |||||||| | ||||||||||||||||||| |||||||||||||| |||| |  ||    
T  9293636 aatattcaagaaatagacgctatgtcatcaacaaaaactaaat-caacatgcatatataaaaattctcaacagtcgcagcggatataaatcatataattc 9293538  T
Q  123 aaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaaa 173  Q
    |||| |||||||||||||  |||  |||||| |||||| ||||||||||||||    
T  9293537 aaaaatatacatgtcatgatatcaaaatacaacatcatcaaaattctccaaaa 9293485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 12891585 - 12891446
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||| ||||||||||||| ||||||| |||||||||| || ||||||||| ||||||||  |||||  | | |||||||| | |||||| ||||    
T  12891585 cgataaaacatgcgaataatataaatattcaagaaatagacgctacgtcatcaacataatccaaa--caacagacatatataaaaaatttcaacaattgc 12891488  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgg 141  Q
    | |||||||| | |||||| ||| ||| ||||||||||||||    
T  12891487 aacggatatagatcatacatctccaaaatatacatgtcatgg 12891446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 37236214 - 37236109
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||| | |||||||| |||||||||| || |||||| |||||||| |||| |||||||| ||||||||||| ||||||||| ||||    
T  37236214 taaaacacgcgaataatacatatattcaagaaatagacgctacgtcatcatacaaaatctaaaa-caacatgcatgtataaaaat-ctcaacagtcgcag 37236117  T
Q  102 cggatata 109  Q
    ||||||||    
T  37236116 cggatata 37236109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40438575 - 40438459
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||  ||||||||  | | |||||||||| ||| ||||| |    
T  40438575 cgatcaaacacgcgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatcc--aaacaacagacatatataaaaattatcaccagttac 40438478  T
Q  100 agcggatataaaccataca 118  Q
    || ||||||| | ||||||    
T  40438477 agtggatatagatcataca 40438459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 22148660 - 22148536
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || |||||| | ||||| | |||| ||||||| |||||||||| |||||||||| |    
T  22148660 cgataaaacacgcgaataataaatatattcaagaaatagacgctacgtcatcatataaaat-ctaaaataacatgcatgtataaaaa-tctcaacagtcg 22148563  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    ||||||||| ||| |||| || |||||    
T  22148562 cagcggatacaaatcataaacttcaaa 22148536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25090988 - 25091095
Alignment:
Q  1 cgataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||| ||| | |||||| |||||||||| || || ||||| ||| | |||  |||||||| | ||||||||||||||||||| ||    
T  25090988 cgataaaacacgcgaataaaatatttattcaagaaatagacgctacgtcttcaacgaaaactaaat-caacatgcatatataaaaattctcaacagtcgc 25091086  T
Q  100 agcggatat 108  Q
    |||||||||    
T  25091087 agcggatat 25091095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 5770264 - 5770190
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagac-aacatcttagatcagagcctat 239  Q
    |||||| ||||||||||||||||||||  |||||||| ||| ||||||||||| |||||| |||||||||||||||    
T  5770264 tctccacaacataaataaatccaggataaacaatctagaat-aatcataagacaaacatcctagatcagagcctat 5770190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 22837844 - 22837754
Alignment:
Q  25 tattcaataaatagacgccacatcatcaac---aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || || ||||||||   ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  22837844 tattcaagaaatagatgctacgtcatcaactcaaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatataaacca 22837754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 19601109 - 19601215
Alignment:
Q  3 ataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||| | |||||||| ||||||||||  | |||||| ||||||| | ||| |||||||| || ||||||  |||||||||| |||    
T  19601109 ataaaacacgcgaataatacatatattcaagaaatagacgctgcgtcatcatacaaaattccaaatcaacatgcatgcataaaa--tctcaacagtcgca 19601206  T
Q  101 gcggatata 109  Q
    |||||||||    
T  19601207 gcggatata 19601215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20191677 - 20191794
Alignment:
Q  1 cgataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||| ||||||| | | | |||||| |||||||||| || ||  ||| |||| |||||  |||||||| | ||||||||||||||||||| ||    
T  20191677 cgataaaacacacgaataaaacatttattcaagaaatagacgctacgtctacaataaaaaccaaat-caacatgcatatataaaaattctcaacagtcgc 20191775  T
Q  100 agcggatataaaccataca 118  Q
    |||| ||||||| ||||||    
T  20191776 agcgaatataaatcataca 20191794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 17021474 - 17021585
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||| | |||||||| |||||||| |  | |||| | ||||||| ||||  |||||||| || ||||||| |||||||||| ||||    
T  17021474 taaaacacgcgaataatacatatattcaagaaatagacactgcgtcattatacaaaattcaaattcaacatgcatgcataaaaa-tctcaacagtcgcag 17021572  T
Q  102 cggatataaacca 114  Q
    || ||||||||||    
T  17021573 cgtatataaacca 17021585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17606840 - 17606954
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatc-aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||   | |||||||| |||||||||| || | ||| |||||||| ||||  |||||||| || ||| ||| |||||||||| |    
T  17606840 cgataaaacacgcgaataaagcatatattcaagaaatagacgctacgttatcaaacaaaattcaaattcaacatgcatgcatagaaa-tctcaacagtcg 17606938  T
Q  99 cagcggatataaacca 114  Q
    ||||| ||||||||||    
T  17606939 cagcgaatataaacca 17606954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 36358564 - 36358450
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| |||||||||   |    
T  36358564 ataaaacatgcgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcata 36358466  T
Q  101 gcggatataaaccata 116  Q
    ||||||||||||||||    
T  36358465 gcggatataaaccata 36358450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 40555480 - 40555553
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagccta 238  Q
    |||||| ||||||||||||||||  ||  |||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  40555480 tctccacaacataaataaatccaaaataaacaatctagaat-aatcataagacagacatcctagatcagagccta 40555553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 41213727 - 41213654
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagccta 238  Q
    |||||| ||||||||||||||||| ||  |||||||| ||| |||| ||||||| ||||| ||||||||||||||    
T  41213727 tctccataacataaataaatccagaataaacaatctagaat-aatcgtaagacagacatcctagatcagagccta 41213654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 19334269 - 19334032
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||||||| ||||||| |||||||||  || |||||||||||| ||||||  |||||||| | ||||| ||||||||||||  |    
T  19334269 cgataaaacacgcgaataatataaatattcaagaaatagacgttacgtcatcaacaaaaatccaaa--caacatgcatatataagaattctcaacagccg 19334172  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaat 198  Q
    ||||||||||| | |||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19334171 cagcggatatagatcatacatctccaaagtatatatgtcatgagatcgaatacatcatcataaaattctccaaaacataaataaatccaggatagacaat 19334072  T
Q  199 ctataataaatcataagacaacatcttagatcagagccta 238  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  19334071 ctataataaatcataaaacaacatcctagatcagagccta 19334032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20707702 - 20707864
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||    
T  20707702 cgataaaacacgtgaataatacaaatattcaagaaatagacgccacatcatcaacaaaatccaaa--caacatgcatatataaaaattctcaacagttgc 20707799  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    ||| |||| ||||||||||||||||||||||||||| |||  ||||  |||||| ||||||||||    
T  20707800 agcagatagaaaccatacacctcaaaagtatacatgacataagatcaaaatacaacatcataaaa 20707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 18043411 - 18043239
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| ||||||  ||||| || | ||||||||||||||||||||||    
T  18043411 cgataaaacacgcgaataatacaaatattcaagaaatagacgccacatcatcaacaaattccaaa--caacaggcatatataaaaattctcaacagttgc 18043314  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaa-attctccaaa 172  Q
    ||  |||||||| ||||||||||||||||||||||| |||| | ||  |||||||||||||||| ||||||||||    
T  18043313 agaagatataaatcatacacctcaaaagtatacatgccatgaggtcaaaatacatcatcataaagattctccaaa 18043239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 18263661 - 18263525
Alignment:
Q  3 ataaaacacgcgaataatataata-ttcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||||||| | ||||| ||||||||| ||| ||||||||||||||||||| |||||| | ||||||||| ||||||||||| ||||    
T  18263661 ataaaacacgcgaataatataaaaattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatccatgtataaaa-ttctcaacagtcgcag 18263564  T
Q  102 cggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18263563 cggatataaaccatacacctcaaaagtatacatgtcatg 18263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 33170165 - 33170337
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| | | |||  || || || | |||||||| |||||| ||||||    
T  33170165 cgataaaacacgcgaataatataaatattcaagaaatagacgccacgtcatcaacaataacgaaat-catcaggcatatataaaaaatctcaatagttgc 33170263  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattctccaaa 172  Q
    ||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  33170264 agcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcataaaattctccaaa 33170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 21234161 - 21234029
Alignment:
Q  104 gatataaaccatacacctcaaaagtatacatgtcatgggatcgaa-tacatcatcataaaattctccaaaacataaataaatccaggatggacaatctat 202  Q
    |||||||| ||||||||||||||||||||||||||||  ||| || || |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  21234161 gatataaatcatacacctcaaaagtatacatgtcatgatatcaaaatatatcatcataaaattctccaagacataaataaatccaggatagacaatctat 21234062  T
Q  203 aataaatcataagacaacatcttagatcagagc 235  Q
    ||||||| ||||||||||||| ||||| |||||    
T  21234061 aataaattataagacaacatcctagattagagc 21234029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 23216571 - 23216731
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||  || || |||||||| ||||||  |||||||| | ||||||||||||||||||||||    
T  23216571 cgataaaacacgcgaataatataaatattcaagaaatagacgttacgtcttcaacaaa-tccaaa--caacatgcatatataaaaattctcaacagttgc 23216667  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    ||| ||||||||||||||||||| |||||||||||| |||| ||||  |||||||||||||||||    
T  23216668 agctgatataaaccatacacctc-aaagtatacatgccatgagatcaaaatacatcatcataaaa 23216731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 15931239 - 15931363
Alignment:
Q  3 ataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||| | |||||||| |||||||||| || |||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  15931239 ataaaacacgcgaataatacatatattcaagaaatagacgctacgtcatcatacaaaatcccaaaacaacatgcatgtataaaaattctcaacagtcgca 15931338  T
Q  101 gcggatataaaccatacacctcaaa 125  Q
    |||||||||||||||| || |||||    
T  15931339 gcggatataaaccatatacttcaaa 15931363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22499564 - 22499392
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | ||||||||||||||||||||||    
T  22499564 cgataaaacacgtgaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgc 22499467  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||| | |||||| ||| ||||| |||||| |||| ||||  ||||||  ||||| |||||||||||||    
T  22499466 agcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacaatatcataaaaattctccaaa 22499392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24265910 - 24266019
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||| ||||| |||||||||||||||||||    
T  24265910 gataaaacacgcgaataatataaatattcaagaaatagacgccacgtcatcaacaaaattc-aaaacaacatgcatgtat-aaaattctcaacagttgca 24266007  T
Q  101 gcggatataaac 112  Q
    ||||||||||||    
T  24266008 gcggatataaac 24266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24554835 - 24554666
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||  ||||  |  | |||||||||| |||||||| |    
T  24554835 cgataaaacacgcgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaatccaaa--caacgggtatatataaaaattatcaacagtcg 24554738  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctc 168  Q
    ||||||||||||| |||||| ||| |||||||||||| |||| ||||  |||||||||||||| ||||||||    
T  24554737 cagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctc 24554666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7468215 - 7468385
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||| ||||||  ||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||  |||||  | |  |||||||||||||||||||||    
T  7468215 cgatgaaacacatgaataatataaatattcaagaaatatacgccacgtcatcaacaaaatccaaa--caacagacat--ataaaaattctcaacagttgc 7468310  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcataaaa-ttctccaaa 172  Q
    ||||||||||||||| |||| ||||||| ||||||| ||||  ||| | ||||| |||||||||| |||||||||    
T  7468311 agcggatataaaccacacacttcaaaagaatacatgccatgaaatcaagatacaacatcataaaagttctccaaa 7468385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23119100 - 23118938
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||| || ||||||| ||| |||||| |  | |||||||||| |||||  ||| |||| | ||||||||||||||||||| ||    
T  23119100 cgataaaacacgcgaataataaaaatattcaagaaacagacgctatgtgatcaacaaaaaccaaat-caatatgcatatataaaaattctcaacagtcgc 23119002  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||  |||||| ||||||||||    
T  23119001 agcggatataaatcatacacctc-aaagtatacatgccatgagatcaaaatacaacatcataaaa 23118938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 29295817 - 29295963
Alignment:
Q  24 atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 121  Q
    |||||||| ||||||||| ||| |||||||  |||||||||||| |||||||| |||||||||  |||||||||| ||||||||||||||||||| || |    
T  29295817 atattcaagaaatagacgtcacgtcatcaaaccaaaatccaaaa-caacatgcatgtataaaa--tctcaacagtcgcagcggatataaaccatatactt 29295913  T
Q  122 caaaagtatacatgtcatgggatcgaatacatcatcataaaa-ttctccaa 171  Q
    | |||||||||||||||||  ||| ||||||| ||||||||| ||||||||    
T  29295914 c-aaagtatacatgtcatgatatcaaatacataatcataaaagttctccaa 29295963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 21234286 - 21234192
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagt 96  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||| ||||||| ||||||||| |||||||||||    
T  21234286 gataaaacacgcgaataatataaatattcaagaaatagacgccacatcatcaacaaaaacc-aaaataacatgcatgtataaaagttctcaacagt 21234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 27233450 - 27233352
Alignment:
Q  4 taaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 102  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||| |  |||||||||||||||||| |||||    
T  27233450 taaaacacgcgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatcc-aaaacaacatgcatacataaaaattctcaacagtcgcagc 27233352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 24236946 - 24237083
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||||| |||||||||||||||||||| |||||||||| || || ||||||||| || ||| |||||||| | ||||||||||||||||| | | |    
T  24236946 cgataaaacatgcgaataatataatattcaagaaatagacgctacgtcttcaacaaaaacc-aaatcaacatgcatatataaaaattctcaacattcgta 24237044  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    | |||||||||  ||||| ||| ||| ||||||||||||    
T  24237045 gtggatataaatgatacatctccaaaatatacatgtcat 24237083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 45561945 - 45561793
Alignment:
Q  23 aatattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacc 120  Q
    ||||||||| |||||||||| ||||||||||  ||||| |||||  |||||||||| ||| |||||| |||||||| ||| |||||||||| ||||||||    
T  45561945 aatattcaagaaatagacgctacatcatcaattcaaaaaccaaat-caacatgcgtatattaaaattatcaacagtcgcatcggatataaatcatacacc 45561847  T
Q  121 tcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||| |||||||||| || | ||||  |||||||||||||| ||||||||||||    
T  45561846 tcaagagtatacatgccaagagatcaaaatacatcatcatataaattctccaaa 45561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17499771 - 17499941
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||  || || ||||||||| | |||  |||||||  | ||||||| ||||||||||| ||    
T  17499771 cgataaaacacgcgaataatataaatattcaagaaatagacgttacgtcttcaacaaaaactaaat-caacatgaatatataaaatttctcaacagtcgc 17499869  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctcc 169  Q
    |||||||||||| |||||| ||| ||| |||||||| ||||  |||  |||||||||||||| |||||||||    
T  17499870 agcggatataaatcatacatctccaaaatatacatgccatgcaatcaaaatacatcatcatataaattctcc 17499941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 22725694 - 22725524
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaa-atccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||| |||||||  || ||||||| |||||||||| ||||| |||||||| |||   ||||||||||| | ||||||| | ||||||||| |    
T  22725694 cgataaaacacgtgaataatccaaatattcaagaaatagacgctacatcttcaacaaatatc---aaacaacatgcatatataaaattcctcaacagtcg 22725598  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcataaaattctccaa 171  Q
    ||||||||||||| |||||| ||| |||  |||||||||||  |||| | |||||||||||||||| |||||||    
T  22725597 cagcggatataaatcatacatctccaaaagatacatgtcataagatcaatatacatcatcataaaaatctccaa 22725524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26009345 - 26009471
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||| | | |||||||| |||||||| | || ||||||| |||||||||||  |||||||||||||||||||  ||||||||| |    
T  26009345 cgataaaacacgcgaataaaacatatattcaagaaatagacactacgtcatcaaacaaaatccaaattcaacatgcgtgtataaaaaa-ctcaacagtag 26009443  T
Q  99 cagcggatataaaccatacacctcaaaa 126  Q
    |||||||||||||||||| || ||||||    
T  26009444 cagcggatataaaccatatacttcaaaa 26009471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 22317441 - 22317554
Alignment:
Q  26 attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaa 125  Q
    |||||| |||||||||  || || |||| |||| |||||  |||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  22317441 attcaagaaatagacgttacgtcttcaataaaaaccaaat-caacatgcgtatataaaaattctcaacagtggcagcggatataaatcatatacctcaaa 22317539  T
Q  126 agtatacatgtcatg 140  Q
    |||||||||| ||||    
T  22317540 agtatacatgccatg 22317554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17264412 - 17264583
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtg--tataaaaattctcaacagtt 97  Q
    ||||||||||| ||||||| |||| ||||||| |||||||| | || || ||||||||| |||||     ||||| ||  ||||||||| |||||||||     
T  17264412 cgataaaacacacgaataaaataaatattcaagaaatagacactacgtcttcaacaaaaaccaaa-----catgcatgcatataaaaatcctcaacagtc 17264506  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||||||| |||||| ||| |||||||||||| |||| ||||  |||||||||||||| ||||||||||||    
T  17264507 gcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 17264583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37655905 - 37655779
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    ||||||||||| ||||||||  | |||||||| |||||||||| || |||||||  ||||| |||||| |||||||| | |||||||||||||||||||     
T  37655905 cgataaaacacacgaataattcatatattcaaaaaatagacgctacgtcatcaatacaaaaaccaaaa-caacatgcatatataaaaattctcaacagtc 37655807  T
Q  98 gcagcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||||| || |||||    
T  37655806 gcagcggatataaaccatatacttcaaa 37655779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5851414 - 5851531
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaat-tctcaacagtt 97  Q
    ||||||||||||||||||||| | |||||||| |||||||| | || |||||  ||||||||||||| |||||||| ||||||||||  ||||||||||     
T  5851414 cgataaaacacgcgaataatacatatattcaagaaatagacactacgtcatcttacaaaatccaaaa-caacatgcatgtataaaaaaatctcaacagtc 5851512  T
Q  98 gcagcggatataaaccata 116  Q
    |||||||||||||||||||    
T  5851513 gcagcggatataaaccata 5851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 22311030 - 22311143
Alignment:
Q  61 caaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat 159  Q
    ||||| |||||||| | |||||||||||||||| ||  || | |||||||| |||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  22311030 caaaatcaacatgcatatataaaaattctcaaccgtcccaactgatataaatcatacacctcaaaagtattcatgtcatgagatcaaaatacatcatcat 22311129  T
Q  160 -aaaattctccaaa 172  Q
      ||||||||||||    
T  22311130 gtaaattctccaaa 22311143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22883704 - 22883874
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||| | | | |||||| |||||||||| || || ||||||||    || | |||||||| ||||||||| ||||||||||| ||    
T  22883704 cgataaaacacgcgaataaaacataaattcaagaaatagacgctacgtcttcaacaaat---aacatcaacatgcatgtataaaatttctcaacagtcgc 22883800  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-aaattctccaaa 172  Q
    | |||||||||| |||||| |||  ||||||||||| |||| |||| | ||||||||||||| ||| ||||||||    
T  22883801 aacggatataaatcatacatctc-caagtatacatgccatgagatcaatatacatcatcatataaagtctccaaa 22883874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 25607813 - 25607985
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaa-aatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||| |||||||| | | |||||||| ||||||| || || || ||||||| |||| |||  |||||||| | ||||||  ||||||||||| |    
T  25607813 cgataaaacatgcgaataaaacatatattcaagaaatagatgctacttcttcaacaacaatctaaa--caacatgcatatataaattttctcaacagtcg 25607910  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    ||||||||||||| |||||| ||| |||||||||||| |||| ||||  ||||||||||||||  |||||||||||    
T  25607911 cagcggatataaatcatacatctc-aaagtatacatgccatgagatcaaaatacatcatcatatcaattctccaaa 25607985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11599987 - 11600095
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||   | |||||||| |||||||||| || || ||||||||| | |||| |||||||| | |||||||||| |||||||| ||    
T  11599987 cgataaaacacgcgaataaagcatatattcaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattatcaacagtcgc 11600085  T
Q  100 agcggatata 109  Q
    ||||||||||    
T  11600086 agcggatata 11600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 16000121 - 16000263
Alignment:
Q  24 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 123  Q
    ||||| || |||||||||| ||||| ||||||||| |    | |||||||| |  |||||| || |||||||| |||||||||||||| |||||| |||     
T  16000121 atatttaagaaatagacgctacatcttcaacaaaaac----atcaacatgcatacataaaatttttcaacagtcgcagcggatataaatcatacatctct 16000216  T
Q  124 aaagtatacatgtcatgggatcga-atacatcatcata-aaattctc 168  Q
    || |||||||||||||| |||| | ||||||||||||| ||||||||    
T  16000217 aatgtatacatgtcatgagatcaatatacatcatcatataaattctc 16000263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11541919 - 11542092
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgc--gtgtataaaaattctcaacagtt 97  Q
    ||||||||||||||||||| | |  |||| || |||||||||| |||||  ||| |||| || ||| ||||||||   | |||||||||||||||||||     
T  11541919 cgataaaacacgcgaataaaacatttatttaagaaatagacgctacatctacaataaaaacc-aaatcaacatgcatatatataaaaattctcaacagtc 11542017  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcataaaattctccaa 171  Q
    | | |||||||||| |||||| ||| ||||||||||||||||  |||| |  ||||||| ||||||| |||||||    
T  11542018 gtaacggatataaatcatacatctccaaagtatacatgtcataagatcaatttacatcaacataaaaatctccaa 11542092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 20707893 - 20707967
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagcctat 239  Q
    |||||| |||||||||||||||| |||  |||||||| ||| |||||||||||| ||||| |||||||||||||||    
T  20707893 tctccacaacataaataaatccaagataaacaatctagaat-aatcataagacagacatcctagatcagagcctat 20707967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22738231 - 22738117
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||| ||||||||| | | |||||||| |||||||||| || |||||| ||||||| |||   |||||||| || ||| |||| ||||||||| |    
T  22738231 cgataaaactcgcgaataaaacatatattcaagaaatagacgctacgtcatcatacaaaattcaacttcaacatgcatgcatataaat-ctcaacagtcg 22738133  T
Q  99 cagcggatataaacca 114  Q
    ||||||||||||||||    
T  22738132 cagcggatataaacca 22738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 17731768 - 17731678
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||  || ||||||| |||||||||| |||||||||||||||||    
T  17731768 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgaatgcataaaaaatctcaacagtcgcagcggatataaacca 17731678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 17283173 - 17283258
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 109  Q
    ||||||||||||||||||| || |||||| ||||||| ||||  || |||||  | ||||||| |||||||||| ||||||||||||    
T  17283173 atattcaataaatagacgctacgtcatcatacaaaattcaaattcatcatgcaagcataaaaa-tctcaacagtcgcagcggatata 17283258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23229550 - 23229498
Alignment:
Q  1 cgataaaacacgcgaataata-taatattcaataaatagacgccacatcatca 52  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| || ||||||    
T  23229550 cgataaaacacacgaataataataatattcaagaaatagacgctacgtcatca 23229498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 23350163 - 23350195
Alignment:
Q  78 tataaaaattctcaacagttgcagcggatataa 110  Q
    ||||||||||||||||||| |||||||||||||    
T  23350163 tataaaaattctcaacagtagcagcggatataa 23350195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 103900 - 104131
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || |||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  103900 cgataaaacacgcgaataatataatattcaagaaatagacgccacgtcttcaataaaatcc-aaaacaacatgcatgtataaaaattctcaacagttgca 103998  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattctccaaaacataaataaatccaggatggacaatct 200  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||   |||||||||||||||||||||||||||| ||||||||| | ||||||    
T  103999 gcggatat-aaccatacacctcaaaa-tatacatgccatgagatcgaata---catcataaaattctccaaaacataaatacatccaggatagtcaatct 104093  T
Q  201 ataataaatcataagaca-acatcttagatcagagccta 238  Q
    |  ||||||||||||||| ||| | ||||||||||||||    
T  104094 aagataaatcataagacataca-cctagatcagagccta 104131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 24082029 - 24082202
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  24082029 cgatacaacacgcgaataatataatattcaagaaatagacgccacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgca 24082127  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaaa 173  Q
    |||||||||||||||| |  ||||||||||||||| ||||  |||  ||||||||||||| ||||||||||||||    
T  24082128 gcggatataaaccatataattcaaaagtatacatgacatgatatcaaaatacatcatcatcaaaattctccaaaa 24082202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 5623670 - 5623504
Alignment:
Q  8 acacgcgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggat 106  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||    
T  5623670 acacgcgaataatataattattcaagaaatagacgtcacgtcatcaacaaaatccaaaat-aacatgtatgtataaaaattctcaacagttgcagcggat 5623572  T
Q  107 ataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||| ||||||| |||| |||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  5623571 ataaatcatacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaaattctccaaa 5623504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23236668 - 23236496
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||| |||||||||| ||||||| ||||||||| ||| ||||||||||||||||||  |||||  | | ||||||||||||||||||||||    
T  23236668 cgataaaacacgcaaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaa--caacagacatatataaaaattctcaacagttgc 23236571  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||  |||||| |||||| |||||||||||||    
T  23236570 agcggatataaatcatacacctcaaaagtatacatgccatgagatcaaaatacaacatcataaaaattctccaaa 23236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3421091 - 3420952
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||  || |||| ||||||||||||||||||| | ||    
T  3421091 cgataaaacacgcgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaat-aagatgcatgtataaaaattctcaacaatcgc 3420993  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||| |||||||| ||||||||||||||||||||||||||||    
T  3420992 agcagatataaatcatacacctcaaaagtatacatgtcatg 3420952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29911961 - 29912100
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||  ||||||| ||    
T  29911961 cgataaaacacacgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccgaaa-caacatgcatgtataaaaatttccaacagtcgc 29912059  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||| |||| ||| |||||| |||||||||||||||| ||||    
T  29912060 agcagataaaaatcatacatctcaaaagtatacatgccatg 29912100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19871828 - 19871999
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||| || |||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | ||||||||||||||| ||||||    
T  19871828 cgataaaacaagcaaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattctcaatagttgc 19871925  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattctccaaa 172  Q
    ||| |||| | | |||||| ||| ||||| ||||||||||| ||||  |||||| |||||||||||||||||||    
T  19871926 agcagatacagatcatacatctccaaagtctacatgtcatgagatcaaaatacaacatcataaaattctccaaa 19871999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24228199 - 24228075
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||| |||||||||| | |||||||| |||||||||| |  ||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||    
T  24228199 cgataaaacatgcgaataatacatatattcaagaaatagacgctatgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattcccaacagtcgc 24228101  T
Q  100 agcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||| || |||||    
T  24228100 agcggatataaaccatatacttcaaa 24228075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6454618 - 6454793
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||| |||||||  |||||||| |||| ||||||| ||||| |||||||| ||||||     
T  6454618 cgataaaacacgcgaataatataaatattcaagaaatagacgtcacgtcatcaactcaaaatcc-aaaataacatgcatgtat-aaaattcttaacagtc 6454715  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcat-aaaattctccaaaa 173  Q
    |||||||||| |||||||| |  ||||||| |||||||| |||   || | |||||||||||| ||||||||||||||    
T  6454716 gcagcggatacaaaccatataattcaaaagcatacatgttatgatgtcaacatacatcatcatcaaaattctccaaaa 6454793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 23411967 - 23412073
Alignment:
Q  67 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcata-aaatt 165  Q
    |||||||| ||||||||||||||||| ||| ||| || ||||||| |||||| ||| |||||||||||| |||| |||| |||||||||||||| |||||    
T  23411967 caacatgcatgtataaaaattctcaatagtcgcaccgaatataaatcatacatctccaaagtatacatgccatgagatcaaatacatcatcatataaatt 23412066  T
Q  166 ctccaaa 172  Q
    |||||||    
T  23412067 ctccaaa 23412073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 14345927 - 14345769
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||||| |||||||||||| ||||||| |||||||||| || || ||||||||||||||   ||| |  | | |||||| ||||||||||||  ||    
T  14345927 gataaaacacacgaataatataaatattcaagaaatagacgctacgtcttcaacaaaatccaac--caatagacatatataaatattctcaacagtcaca 14345830  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 160  Q
    || |||||||| |||||| ||| ||||||||||||||||| ||||  ||||||||||||||    
T  14345829 gcagatataaatcatacatctccaaagtatacatgtcatgagatcaaaatacatcatcata 14345769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 16837993 - 16837860
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |  || |||||||||  |||||  ||||||| | ||||||||||||||| ||| ||    
T  16837993 cgataaaacacgcgaataatataaatattcaagaaatagacgctaggtcttcaacaaaa--caaaattaacatgcatatataaaaattctcaatagtcgc 16837896  T
Q  100 agcggatataaaccatacacctcaaaagtatacatg 135  Q
    |||||||||||| | |||| ||| ||||| ||||||    
T  16837895 agcggatataaatcttacatctccaaagtctacatg 16837860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 22879811 - 22879941
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||  ||||||||| |||| ||||||| ||||| |||||||| |||||| ||    
T  22879811 cgataaaacacgcgaataacataaatattcaagaaatagacgccacgtcattcacaaaatcc-aaaataacatgcatgtat-aaaattcttaacagtcgc 22879908  T
Q  100 agcggatataaaccatacacctcaaaagtatac 132  Q
    |||||||| | | |||||| |||||| ||||||    
T  22879909 agcggataaagatcatacatctcaaacgtatac 22879941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 26562038 - 26561914
Alignment:
Q  8 acacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggat 106  Q
    |||| |||||||||||| ||||||| ||||||||  ||  || ||||||||| |||||  |||||||| ||||||||| ||||||||||| |||||||||    
T  26562038 acacccgaataatataaatattcaagaaatagacatcatgtcctcaacaaaaaccaaat-caacatgcatgtataaaa-ttctcaacagtcgcagcggat 26561941  T
Q  107 ataaaccatacacctcaaaagtataca 133  Q
    ||||| ||||| |||||||||||||||    
T  26561940 ataaatcatactcctcaaaagtataca 26561914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28887805 - 28887919
Alignment:
Q  1 cgataaaacacgcgaataat-ataatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||| ||||||||||| |||||||||  || |||||| ||||||||||||  |||||||  || ||||||| |||||||||| |    
T  28887805 cgataaaacacgcgaataataataatattcaagaaatagacgatacgtcatcatacaaaatccaaattcaacatgaatgcataaaaa-tctcaacagtcg 28887903  T
Q  99 cagcggatataaacca 114  Q
     |||||||||||||||    
T  28887904 tagcggatataaacca 28887919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 11963569 - 11963682
Alignment:
Q  61 caaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcat 159  Q
    ||||| |||||||| | ||||||||||||||| ||| |||||||||||||| |||||| ||||||| |||| |||||||  |||| | ||||||||||||    
T  11963569 caaaatcaacatgcatatataaaaattctcaatagtcgcagcggatataaatcatacatctcaaaaatataaatgtcataagatcaatatacatcatcat 11963668  T
Q  160 a-aaattctccaaa 172  Q
    | ||| ||||||||    
T  11963669 ataaaatctccaaa 11963682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 20456754 - 20456649
Alignment:
Q  69 acatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattc 166  Q
    |||||| | |||||||||||||||||||  ||||||||||||| |||||| ||| ||| |||||||| |||| ||||  |||||||||||||| ||||||    
T  20456754 acatgcatatataaaaattctcaacagtcacagcggatataaatcatacatctccaaaatatacatgccatgagatcaaaatacatcatcatataaattc 20456655  T
Q  167 tccaaa 172  Q
    ||||||    
T  20456654 tccaaa 20456649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 21228634 - 21228523
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||| ||||||| | |||||||| |||||||||  || |||||| ||||||| ||||  |||||||| || |||||||| ||||||||| ||||    
T  21228634 taaaacacgcaaataatacatatattcaagaaatagacgttacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcag 21228536  T
Q  102 cggatataaacca 114  Q
    |||||||||||||    
T  21228535 cggatataaacca 21228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 37483250 - 37483114
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||| ||||||||||||||||| ||||||||||||| |||| || || |||   |||||| ||||  |||||||| | ||||||| |  ||||||||     
T  37483250 cgataatacacgcgaataatataaatattcaataaataaacgctacgtcttcacatcaaaattcaaa--caacatgcatatataaaattcatcaacagtc 37483153  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgt 136  Q
    |||||||||||||  |||||| ||||||| |||||||||    
T  37483152 gcagcggatataagtcatacatctcaaaaatatacatgt 37483114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 21614949 - 21615033
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 109  Q
    |||||||| |||||||||| || |||||| ||||||||||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  21614949 atattcaagaaatagacgctacgtcatcatacaaaatccaaaa-caacatgcatgtataaaaa-tctcaacagccgcagcggatata 21615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 11765945 - 11765837
Alignment:
Q  25 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaa 124  Q
    ||||||| |||||||||  || || |||||||||  ||  |||||||||| | ||||||| ||||||| ||| |||||||||||||| |||||| ||| |    
T  11765945 tattcaagaaatagacgttacgtcttcaacaaaa--caccaacaacatgcatatataaaatttctcaatagtcgcagcggatataaatcatacatctcca 11765848  T
Q  125 aagtatacatg 135  Q
    || ||||||||    
T  11765847 aaatatacatg 11765837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 23236477 - 23236403
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagcctat 239  Q
    |||||| |||||||||||||||| |||  |||||||| ||| |||||||||||| ||||| |||||||||||||||    
T  23236477 tctccacaacataaataaatccaagataaacaatctagaat-aatcataagacagacatcctagatcagagcctat 23236403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 430713 - 430824
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| || || |||||| ||||||| ||||  |||||||| || ||| |||| ||||||||| |||    
T  430713 ataaaacatgcgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcatataaat-ctcaacagtcgca 430811  T
Q  101 gcggatataaacc 113  Q
    |||||||||||||    
T  430812 gcggatataaacc 430824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5453589 - 5453471
Alignment:
Q  1 cgataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaac--aaaatccaaaaacaacatgcgtgtataaaaa-ttctcaacagt 96  Q
    |||||||||||| |||||| | ||| |||||| |||||||||| || || |||||  ||||||||||| ||||| ||  ||||||||| || |||||||     
T  5453589 cgataaaacacgagaataagacaattattcaagaaatagacgctacgtcgtcaactcaaaatccaaaa-caacacgcaagtataaaaacttatcaacagc 5453491  T
Q  97 tgcagcggatataaaccata 116  Q
     |||||||||||||||||||    
T  5453490 cgcagcggatataaaccata 5453471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 23452807 - 23452895
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || ||||||||| ||||||| ||||  |||||||| || ||| |||  ||||||||| |||||||||||||||||    
T  23452807 tattcaagaaatagatgctacatcatcatacaaaattcaaattcaacatgcatgcatataaa--ctcaacagtcgcagcggatataaacca 23452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 23460051 - 23460139
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || ||||||||| ||||||| ||||  |||||||| || ||| |||  ||||||||| |||||||||||||||||    
T  23460051 tattcaagaaatagatgctacatcatcatacaaaattcaaattcaacatgcatgcatataaa--ctcaacagtcgcagcggatataaacca 23460139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 23464312 - 23464400
Alignment:
Q  25 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || ||||||||| ||||||| ||||  |||||||| || ||| |||  ||||||||| |||||||||||||||||    
T  23464312 tattcaagaaatagatgctacatcatcatacaaaattcaaattcaacatgcatgcatataaa--ctcaacagtcgcagcggatataaacca 23464400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 37985817 - 37985892
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    ||||||||||| | ||||||  ||||||||||| ||| | |||||||| |||||| ||| ||| ||||||||||||    
T  37985817 aaacaacatgcatatataaattttctcaacagtcgcatcagatataaatcatacatctccaaaatatacatgtcat 37985892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11963171 - 11963213
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagacgc 42  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  11963171 cgataaaacacgcgaataatataaatattcaagaaatagacgc 11963213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 9e-51; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 43429797 - 43429625
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| | |||| ||||| || | |||||||||| ||||||||||||    
T  43429797 cgataaaacacgcgaataatataatattcaagaaatagacgccacgacatcaacaaaaac-aaaatcaacaggcatatataaaaattttcaacagttgca 43429699  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||| |||||||||||||    
T  43429698 gcggatataaaccatacacctcaaaagtatacatgccatgagatcaaaatacatcatcataaaaattctccaaa 43429625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 31416475 - 31416242
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||  ||||| || | ||||||||||||||||||||||    
T  31416475 cgataaaacacgcgaataatataaatattcaagaaatagacgccacgtcatcaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgc 31416378  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatca-taaaattctccaaaacataaataaatccaggatggacaat 198  Q
    |||| |||||||||||||||||| |||||||| ||| |||| |||| | |||||| |||  ||||||||||| |||||||||||||| || ||  |||||    
T  31416377 agcgaatataaaccatacacctc-aaagtatatatgccatgagatcaattacatcgtcacgaaaattctccacaacataaataaatctagaataaacaat 31416279  T
Q  199 ctataataaatcataagaca-acatcttagatcagagc 235  Q
    ||| ||| ||| |||||||| ||||| ||||| |||||    
T  31416278 ctagaat-aattataagacagacatcctagattagagc 31416242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 21168957 - 21168791
Alignment:
Q  8 acacgcgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggat 106  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||    
T  21168957 acacgcgaataatataattattcaagaaatagacgtcacgtcatcaacaaaatccaaaat-aacatgtatgtataaaaattctcaacagttgcagcggat 21168859  T
Q  107 ataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||| ||||||| |||| |||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  21168858 ataaatcatacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaaattctccaaa 21168791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 22637248 - 22637416
Alignment:
Q  3 ataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||||  ||||| || | ||||||  ||||||||||||||||    
T  22637248 ataaaacacgcgaataatataaatattgaagaaatagacgccacgtcatcaacaaaatccaaa--caacaggcatatataaat-ttctcaacagttgcag 22637344  T
Q  102 cggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  22637345 cggatataaaccatacacctc-aaagtatacatgtcatgagatcaaaatacatcatcataaaaattctccaaa 22637416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 4164504 - 4164330
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||  | |    
T  4164504 cgataaaacacgcgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacaactac 4164406  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatggga-tcgaatacatcatca-taaaattctccaaaa 173  Q
    ||||||||||||||||| |  ||||||||||||||| ||||  | |  |||||||||||| |||||||||||||||    
T  4164405 agcggatataaaccataaaattcaaaagtatacatgccatgatattaaaatacatcatcattaaaattctccaaaa 4164330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12950483 - 12950657
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||| || |||||||  ||||| | |||| |||||||| |||||||||||||||||||||     
T  12950483 cgataaaacacgcgaataatataaatattcaagaaatagacgctacgtcatcaattcaaaaac-aaaatcaacatgcatgtataaaaattctcaacagtc 12950581  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||||||| ||||| ||||||||||||||||| |||| ||||  |||||||||||||| ||||||||||||    
T  12950582 gcagcggatataaatcatac-cctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 12950657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 6817866 - 6817720
Alignment:
Q  27 ttcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaa 126  Q
    ||||| |||||||||| ||||||||||||||| |||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6817866 ttcaagaaatagacgctacatcatcaacaaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagcggatataaatcatacacctcaaaa 6817768  T
Q  127 gtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    ||||||||| |||| ||||  |||||||||||||| ||||||||||||    
T  6817767 gtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 6817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 41659530 - 41659702
Alignment:
Q  2 gataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||| ||||||||||| ||||||| ||||||||  ||| |||||||||||||||||||  | ||||| ||||  ||||||||||||| |||||    
T  41659530 gataaaacacgagaataatataaatattcaagaaatagacatcacgtcatcaacaaaatccaaaat-agcatgcatgtaataaaattctcaacaattgca 41659628  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||||||||| ||||||||||||||||| |||||  |||  ||||||||||||| |||||||||||||    
T  41659629 gcggatataaaccataaacctcaaaagtatacatttcatgatatcaaaatacatcatcataaaaattctccaaa 41659702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 6230918 - 6230744
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||| |||||||||| || ||||||| ||||||||| | | |||||||| |||||||||| |||||||| ||||||||||| ||||||||| ||    
T  6230918 cgataaaacatgcgaataatacaaatattcaagaaatagacgtcgcgtcatcaaccaaatccaaaa-caacatgcatgtataaaaatcctcaacagtcgc 6230820  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaaa 173  Q
    |||| |||||||||||||||| || |||||||||||| |||  |||  ||||||||||||| ||||||||||||||    
T  6230819 agcgaatataaaccatacaccgcagaagtatacatgtaatgatatcaaaatacatcatcatcaaaattctccaaaa 6230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 4147931 - 4147813
Alignment:
Q  23 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaa--ttctcaacagttgcagcggatataaaccatacacc 120  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  ||||||||| ||||||||||||||||||||| |      
T  4147931 aatattcaagaaatagacgccacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaaaattctcaacaattgcagcggatataaaccataaaat 4147833  T
Q  121 tcaaaagtatacatgtcatg 140  Q
    ||||||||||||||||||||    
T  4147832 tcaaaagtatacatgtcatg 4147813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 18967991 - 18968129
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||| |||||| ||||| |||| ||||||| ||||||||| ||| ||||||||||||| ||||| ||||| || ||||||||||||| ||||||| ||    
T  18967991 cgataagacacgcaaataagataaatattcaagaaatagacgtcacgtcatcaacaaaattcaaaa-caacacgcatgtataaaaattc-caacagtcgc 18968088  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||| ||||||||| |||| |||||||||||||    
T  18968089 agcggatataaagcatacacctaaaaaatatacatgtcatg 18968129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 8602219 - 8602391
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||| |||||||||| ||||||| |||||||||| || || ||||||||| ||||| | | ||||| | ||||||| ||||||||||| ||    
T  8602219 cgataaaacacgcaaataatataaatattcaagaaatagacgctacgtcttcaacaaaagccaaacata-catgcatatataaaatttctcaacagtcgc 8602317  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaa 171  Q
    |||||||||||  |||||| ||| ||| ||||||||||||  ||||  |||||||||||||| |||||||||||    
T  8602318 agcggatataagtcatacatctccaaaatatacatgtcataagatcaaaatacatcatcatataaattctccaa 8602391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 17320834 - 17320665
Alignment:
Q  3 ataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||  |||||||| || | ||||||||||||| |||| |||||    
T  17320834 ataaaacacgcgaataatataaatattcaggaaatagacgccacatcatcaacaaaatcc--aaacaacaggcatatataaaaattctc-acagctgcag 17320738  T
Q  102 cggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||| | ||| || ||| ||||| |||||| |||| || |  |||||| |||||| |||||||||||||    
T  17320737 cggatatagatcattcatctctaaagtctacatgccatgagaccaaaatacaacatcataaaaattctccaaa 17320665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 10902470 - 10902566
Alignment:
Q  78 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||  |||||||||||||| ||||||||||||    
T  10902470 tataaaaattctcaacagttgcagcggatataaattatacacctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 10902566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 14820084 - 14819971
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||| |  || ||||||||||| |||| || |||||||| ||||||||| ||||||||||||||    
T  14820084 cgataaaacacgcgaataatataaatattcaagaaatagaagttacgtcatcaacaaagtccagaa-caacatgcatgtataaaa-ttctcaacagttgc 14819987  T
Q  100 agcggatataaaccat 115  Q
    ||||||||||||||||    
T  14819986 agcggatataaaccat 14819971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 15552153 - 15551987
Alignment:
Q  4 taaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 102  Q
    |||||||| ||||||||| || ||||||| |||||||||  || || ||||||||| |||||  |||||||| | ||||||||||||||||||| |||||    
T  15552153 taaaacacacgaataataaaaatattcaagaaatagacgttacgtcttcaacaaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagc 15552055  T
Q  103 ggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-aaattctc 168  Q
     |||||||| |||||| ||| ||| ||||||||||||| |||| | ||||||||||||| ||||||||    
T  15552054 agatataaatcatacatctccaaaatatacatgtcatgagatcaatatacatcatcatataaattctc 15551987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 33371621 - 33371499
Alignment:
Q  3 ataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||| ||| ||||||||||| ||||||| |||||||| | || | || |||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  33371621 ataaaatacgtgaataatataaatattcaagaaatagacactacgtaattaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagtcgcag 33371523  T
Q  102 cggatataaaccatacacctcaaa 125  Q
    ||||||||||||||| || |||||    
T  33371522 cggatataaaccatatacttcaaa 33371499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 5230871 - 5230699
Alignment:
Q  2 gataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||   | |||||||| |||||||||| || || ||||||||| | |||| |||||||| | ||||||||||||||| |||||||    
T  5230871 gataaaacacgcgaataaagcatatattcaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattctcaatagttgca 5230773  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-aaattctccaaa 172  Q
    ||| ||||||| |||||| ||| |||  |||||||||||  |||| | ||||||||||||| ||| ||||||||    
T  5230772 gcgtatataaatcatacatctccaaaacatacatgtcataagatcaatatacatcatcatataaaatctccaaa 5230699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14182649 - 14182532
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||| ||||||||| |||||||||| || || |||||||||  ||||  |||||||| | |||||||||| ||||| || ||    
T  14182649 cgataaaacacgcgaataatatgaatattcaagaaatagacgctacgtcttcaacaaaaatcaaat-caacatgcatatataaaaattttcaacggtcgc 14182551  T
Q  100 agcggatataaaccataca 118  Q
    |||||||||||| ||||||    
T  14182550 agcggatataaatcataca 14182532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 37919074 - 37918968
Alignment:
Q  67 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaat 164  Q
    |||||||| | ||||||||||||||||||| |||||||||| ||| |||||| ||| ||| ||||||||||||| ||||  ||||||||||||| |||||    
T  37919074 caacatgcatatataaaaattctcaacagtcgcagcggatagaaatcatacatctccaaaatatacatgtcatgagatcaaaatacatcatcataaaaat 37918975  T
Q  165 tctccaa 171  Q
    |||||||    
T  37918974 tctccaa 37918968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34557783 - 34557907
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaac-aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||  || |||||||  ||||||||||| |||||||| |||||||||| |||||||||| |    
T  34557783 cgataaaacacgcgaataatacatatattcaagaaatagacgatacgtcatcaaataaaatccaaaa-caacatgcatgtataaaaa-tctcaacagtcg 34557880  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    || | ||||||||||||| || |||||    
T  34557881 caacagatataaaccatatacttcaaa 34557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 15988443 - 15988579
Alignment:
Q  1 cgataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||| | | | |||||| |||||||||| || || |||| |||| |||||  |||||||| | ||||||||||||||||||| ||    
T  15988443 cgataaaacacgcgaataaaacatttattcaagaaatagacgctacgtcttcaataaaaaccaaat-caacatgcatatataaaaattctcaacagtcgc 15988541  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    |||||||||| | |||||| ||| |||  |||||||||||    
T  15988542 agcggatatatatcatacatctccaaa--atacatgtcat 15988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 17761060 - 17760891
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||  || ||||||| |||| ||||| || || ||||| ||| | ||||  ||||||| | ||||||||||||||||| | ||    
T  17761060 cgataaaacacgcgaataatcgaaatattcaagaaatggacgctacgtcttcaacgaaaac-aaaattaacatgcatatataaaaattctcaacattcgc 17760962  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||| | ||||    || ||||||||||||||||  ||||  |||||||||||||| ||||||||||||    
T  17760961 agcggatatagatcata----tccaaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaa 17760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19062380 - 19062211
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||||  || ||||||| |||| ||||| || || ||||| ||| | ||||  ||||||| | ||||||||||||||||| | ||    
T  19062380 cgataaaacacgcgaataatcgaaatattcaagaaatggacgctacgtcttcaacgaaaac-aaaattaacatgcatatataaaaattctcaacattcgc 19062282  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||| | ||||    || ||||||||||||||||  ||||  |||||||||||||| ||||||||||||    
T  19062281 agcggatatagatcata----tccaaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaa 19062211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 40041819 - 40041679
Alignment:
Q  2 gataaaacacgcgaataatataat-attcaataaatagacgcc---acatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||||||||||||||| | | | |||||| ||||||||||    || || ||||||||| |||||   | ||||| | |||||||||||| ||||||     
T  40041819 gataaaacacgcgaataaaacatttattcaagaaatagacgctgctacgtcttcaacaaaaaccaaatcaatcatgcatatataaaaattcttaacagtc 40041720  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtca 138  Q
    ||| | |||||||| ||||||||||||||||||| ||||||    
T  40041719 gcatcagatataaatcatacacctcaaaagtatatatgtca 40041679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 55513957 - 55513848
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||   | |||||||| |||||||||| ||||| ||||||||  ||||| | | ||||| | ||||||| ||||||||||| ||    
T  55513957 cgataaaacacgcgaataaagcagatattcaagaaatagacgctacatcttcaacaaaggccaaacata-catgcatatataaaatttctcaacagtcgc 55513859  T
Q  100 agcggatataa 110  Q
    |||||||||||    
T  55513858 agcggatataa 55513848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 17390931 - 17391056
Alignment:
Q  13 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaatt-ctcaacagttgcagcggatataa 110  Q
    |||||||||||| ||||||| |||||||||| || || |||||||| | ||||  |||||||| | ||||||  || ||||||||| |||||||||||||    
T  17390931 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaatttcaaa--caacatgcatatataaattttgctcaacagtcgcagcggatataa 17391028  T
Q  111 accatacacctcaaaagtatacatgtcat 139  Q
    | |||||| ||| ||| ||||||||||||    
T  17391029 atcatacatctccaaa-tatacatgtcat 17391056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 12019841 - 12019952
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||||| | ||||| || |||||||||| || |||||| ||||||| ||||  |||||||| || ||||||| |||||| ||| ||||    
T  12019841 taaaacacgcgaataatacagatatttaagaaatagacgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaa-tctcaatagtcgcag 12019939  T
Q  102 cggatataaacca 114  Q
    || ||||||||||    
T  12019940 cgaatataaacca 12019952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 14061513 - 14061399
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| || || |||||| ||||||| ||||   ||||||| || |||||||| ||||||||| |||    
T  14061513 ataaaacatgcgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaatttaacatgcatgcataaaaat-ctcaacagtcgca 14061415  T
Q  101 gcggatataaaccata 116  Q
    ||||||||||||||||    
T  14061414 gcggatataaaccata 14061399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 25769133 - 25769242
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| || || |||||| ||||||| ||||  |||||||| || ||||||||| |||||||| |||    
T  25769133 ataaaacatgcgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaactcaacatgcatgcataaaaatt-tcaacagtcgca 25769231  T
Q  101 gcggatataaa 111  Q
    |||||||||||    
T  25769232 gcggatataaa 25769242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13330767 - 13330874
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||  || |||||| ||||||| ||||  | |||||| |||||||||  |||||||||| |    
T  13330767 cgataaaacacgcgaataataaatatattcaaaaaatagacgttacgtcatcatacaaaattcaaattc-acatgcatgtataaaa--tctcaacagtcg 13330863  T
Q  99 cagcggatata 109  Q
     ||||||||||    
T  13330864 tagcggatata 13330874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 25106532 - 25106457
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    ||||||| ||| | |||||||| | |||||||| |||||||||||||| |||||| ||| ||| ||||||| ||||    
T  25106532 aaacaacgtgcatatataaaaaatttcaacagtcgcagcggatataaatcatacatctccaaaatatacatatcat 25106457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 15548422 - 15548563
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatc-aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||   | |||||||| |||||||||| || ||||| |||||||  | |||||||||||| |  ||| ||| ||||||||||      
T  15548422 cgataaaacacgcgaataaggcatatattcaagaaatagacgctacgtcatcaaacaaaactccaaaacaacatgcatacatataaa-tctcaacagtca 15548520  T
Q  99 cagcgga-tataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||| ||||||||||| |  ||||||| || |||||||||    
T  15548521 cagcggattataaaccatataattcaaaagcatgcatgtcatg 15548563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 17320646 - 17320573
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagccta 238  Q
    |||||| ||||||||||||||||  ||  |||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  17320646 tctccacaacataaataaatccaaaataaacaatctagaat-aatcataagacagacatcctagatcagagccta 17320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38378428 - 38378370
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaa 58  Q
    ||||||||||| |||||||||||| |||| || |||||||||  |||||||||||||||    
T  38378428 cgataaaacacacgaataatataaatatttaagaaatagacgttacatcatcaacaaaa 38378370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 43429606 - 43429533
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagaca-acatcttagatcagagccta 238  Q
    |||||| ||||||||||||||||| ||  |||||||| ||| |||| ||||||| ||||| ||||||||||||||    
T  43429606 tctccacaacataaataaatccagaataaacaatctagaat-aatcttaagacatacatcctagatcagagccta 43429533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 11331232 - 11331120
Alignment:
Q  3 ataaaacacgcgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| |||||||||| ||||||| |  || | |||| ||||||| ||||  |||||||| || ||| |||| ||||||||| |||    
T  11331232 ataaaacatgcgaataataataatattcaagaaatagatgttacgttatcatacaaaattcaaattcaacatgcatgcatataaat-ctcaacagtcgca 11331134  T
Q  101 gcggatataaacca 114  Q
    || |||||||||||    
T  11331133 gcagatataaacca 11331120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 8687860 - 8687900
Alignment:
Q  78 tataaaaattctcaacagttgcagcggatataaaccataca 118  Q
    ||||||| ||||||||||| |||||||||||||| ||||||    
T  8687860 tataaaatttctcaacagtcgcagcggatataaatcataca 8687900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 9039729 - 9039769
Alignment:
Q  78 tataaaaattctcaacagttgcagcggatataaaccataca 118  Q
    ||||||| ||||||||||| |||||||||||||| ||||||    
T  9039729 tataaaatttctcaacagtcgcagcggatataaatcataca 9039769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 99061 - 99200
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||||    
T  99061 cgataaaacacgcgaataatataaatattcaagaaatagacgccacatcatcaaaaaaatccaaaat-aacatgcatgtataaaaattctcaacagttgc 99159  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  99160 agcggatataaatcatacacctcaaaagtatacatgccatg 99200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 11259 - 11076
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| |||| ||  ||||||  |||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  11259 cgataaaacacgcgaataatataaatatttaagtaatagattccacgtcatcaacaaaatccaaac-caacatgcatgtataaaaattctcaacagttgc 11161  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaaacataaataaa 183  Q
    | |||||||||||||||||||| ||||||||||||||||||  |||  ||||||||||||| |||||||||| |||||||||||||    
T  11160 aacggatataaaccatacacctaaaaagtatacatgtcatgatatcaaaatacatcatcataaaaattctcc-aaacataaataaa 11076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24271962 - 24272135
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||| ||||||||||  ||||||| ||||||||||||||||||||| ||    
T  24271962 cgataaaacacgcgaataatgtaaatattcaagaaatagacgccacgtcatcaacgaaatccaaaat-aacatgcatgtataaaaattctcaacagtcgc 24272060  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    || ||||||||| |||||||||| |||||||| ||||||||  |||  ||||||||||||| |||||||||||||    
T  24272061 agtggatataaatcatacacctctaaagtatatatgtcatgatatcaaaatacatcatcataaaaattctccaaa 24272135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30995240 - 30995102
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||  ||||||||||| |  |||  | | |||||||||||||||||||     
T  30995240 cgataaaacacacgaataatataaatattcaagaaatagacgccacgtcatcaattcaaaatccaaata--acagacatatataaaaattctcaacagtc 30995143  T
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtca 138  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30995142 gcagcggatataaaccatacacctcaaaagtatacatgtca 30995102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 6092367 - 6092538
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | ||||||| ||||||||||||||    
T  6092367 cgataaaacacgcgaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaagcatatataaaa-ttctcaacagttgc 6092463  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||| | |||||| ||| ||||| |||||||| |  ||||  |||||| |||||| |||||||||||||    
T  6092464 agcggatatagatcatacatctccaaagtctacatgtcgtaagatcaaaatacaacatcataaaaattctccaaa 6092538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 43640264 - 43640388
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||  |||| ||||||| |||||||||  || |||||||||||| |||||| |||||||| ||||||||||||  ||||||| ||    
T  43640264 cgataaaacacgcgaatagcataaatattcaagaaatagacgatacgtcatcaacaaaacccaaaa-caacatgcatgtataaaaatttccaacagtcgc 43640362  T
Q  100 agcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||| || |||||    
T  43640363 agcggatataaaccatatacttcaaa 43640388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 19436179 - 19436054
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| ||||||| || ||||||| || |||||||||||| |||||||| ||||||||||| ||||||||| |    
T  19436179 cgataaaacacgcgaataatacatatattcaagaaatagaagctacatcattaaacaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcg 19436082  T
Q  99 cagcggatataaaccatacacctcaaaa 126  Q
    |||||||||||||| ||| || ||||||    
T  19436081 cagcggatataaacaatatacttcaaaa 19436054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 18533352 - 18533432
Alignment:
Q  81 aaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 160  Q
    |||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||| ||||  ||||||||||||||    
T  18533352 aaaaattctcaacagtcgcagcggatataaaacatacatctccaaagtatacatgtcatgagatcaaaatacatcatcata 18533432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19647999 - 19648171
Alignment:
Q  1 cgataaaacacgcgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||| | |||  | ||||| | ||||| |  |||||||||| |    
T  19647999 cgataaaacaagcgaataataataatattcaagaaatagacgctacatcatcatacaaaattccaaacaatcatgcatatataata--tctcaacagtcg 19648096  T
Q  99 cagcgga-tataaaccatacacctcaaaagtatacatgtcatgggatc--gaatacatcatcataaaattctccaa 171  Q
    ||||||| |||||||||||||| |||||| |||||||| ||||  |||   ||||||||| ||||||| |||||||    
T  19648097 cagcggattataaaccatacacttcaaaa-tatacatgccatgatatcaataatacatcaacataaaactctccaa 19648171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 23823730 - 23823642
Alignment:
Q  25 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || || ||||||||||||| ||||  |||||||| || ||||||| |||||||||| |||||||||||||||||    
T  23823730 tattcaagaaatagatgctacgtcatcaacaaaattcaaattcaacatgcatgcataaaaa-tctcaacagtcgcagcggatataaacca 23823642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 23825674 - 23825586
Alignment:
Q  25 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    ||||||| ||||||| || || ||||||||||||| ||||  |||||||| || ||||||| |||||||||| |||||||||||||||||    
T  23825674 tattcaagaaatagatgctacgtcatcaacaaaattcaaattcaacatgcatgcataaaaa-tctcaacagtcgcagcggatataaacca 23825586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22138070 - 22137969
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||||||||||||||| | |||||||| |||||||||| || |||||| ||||| ||||||| |||||||| |||||||||| |||||||||| |    
T  22138070 cgattaaacacgcgaataatacatatattcaagaaatagacgctacgtcatcacacaaattccaaaa-caacatgcatgtataaaaa-tctcaacagtcg 22137973  T
Q  99 cagc 102  Q
    ||||    
T  22137972 cagc 22137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24089683 - 24089571
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||    
T  24089683 ataaaacatgcgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgca 24089585  T
Q  101 gcggatataaacca 114  Q
    ||||||||||||||    
T  24089584 gcggatataaacca 24089571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 20270849 - 20270985
Alignment:
Q  5 aaaacacgcgaataatataat-attcaataaataga--cgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    ||||||||||||||| | | | |||||| |||||||  ||| || || |||||||||  ||||| |||||||  | ||||||||||||||| ||| ||||    
T  20270849 aaaacacgcgaataaaacatttattcaagaaatagatgcgctacgtcttcaacaaaaatcaaaatcaacatgaatatataaaaattctcaatagtcgcag 20270948  T
Q  102 cggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    | |||||||| |||||| ||| ||| ||||||||||||    
T  20270949 cagatataaatcatacatctccaaa-tatacatgtcat 20270985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 19643889 - 19643970
Alignment:
Q  89 tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-aaattctc 168  Q
    |||||||| |||||||||||||| |||||| ||| ||| ||||||||||||  |||| | ||||||||||||| ||||||||    
T  19643889 tcaacagtcgcagcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcatataaattctc 19643970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 22582257 - 22582145
Alignment:
Q  3 ataaaacacgcgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| |  ||||||| ||||||| || || |||||| || |||| ||||  |||||||| || |||||||| ||||||||| |||    
T  22582257 ataaaacatgcgaataatacttttattcaagaaatagatgctacgtcatcatacgaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgca 22582159  T
Q  101 gcggatataaacca 114  Q
    ||||||||||||||    
T  22582158 gcggatataaacca 22582145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 32738405 - 32738496
Alignment:
Q  25 tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 116  Q
    ||||||| |||||||||| || | ||||| |||||| ||||  |||||||| || |||||||| ||||||||| |||||| ||||||||||||    
T  32738405 tattcaagaaatagacgctacgttatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcgaatataaaccata 32738496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 24839403 - 24839478
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    ||||||||||| | ||||||||||||||||||| ||||| |||||||  ||||   ||| ||| ||||||||||||    
T  24839403 aaacaacatgcatatataaaaattctcaacagtcgcagcagatataattcatatgtctccaaaatatacatgtcat 24839478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 25303524 - 25303614
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    |||||||| |||||||||| || |||||| ||||||  ||||  |||||||| || |||||||| ||||||| | |||||||||||||||||    
T  25303524 atattcaagaaatagacgctacgtcatcatacaaaactcaaattcaacatgcatgcataaaaat-ctcaacattcgcagcggatataaacca 25303614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 40642566 - 40642477
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    |||||||| |||||||||| || |||||| ||||||| ||||  |||||| |  ||||||||  ||||| |||| |||||||||||||||||    
T  40642566 atattcaagaaatagacgctacgtcatcatacaaaattcaaattcaacatacacgtataaaa--tctcatcagtcgcagcggatataaacca 40642477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3285 - 3145
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataa-aaattctcaacagttg 98  Q
    |||||||||||||||||||||||| |||| || |||||||||| || ||||||||||||||||||| |||||||| ||||||| ||| |||||||||| |    
T  3285 cgataaaacacgcgaataatataaatattaaagaaatagacgctacgtcatcaacaaaatccaaaa-caacatgcatgtataagaaactctcaacagtcg 3187  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  3186 cagcggatataaaccagacacctcaaaagtatacatgtcatg 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 26276 - 26144
Alignment:
Q  1 cgataaaacacgc-gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||| |||||||| |    
T  26276 cgataaaacacgccgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccaaaa-caacatgcatgtatacaaattttcaacagtcg 26178  T
Q  99 cagcggatataaaccatacacctcaaaagtatac 132  Q
    |||| |||||||||||||||||||||||||||||    
T  26177 cagcagatataaaccatacacctcaaaagtatac 26144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 26140 - 26065
Alignment:
Q  89 tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||    
T  26140 tcaacagtcgcagcagatataaaccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaa 26065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7144 - 6972
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||| ||||||||||||||| ||||||| |||||||||| || |||||||| |||| ||||| |||||||| ||||||||  || |||||||||||    
T  7144 cgataaaatacgcgaataatataaatattcaagaaatagacgctacttcatcaacgaaatgcaaaa-caacatgcatgtataaattttttcaacagttgc 7046  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||||||| || | |||||||| |||||||  |||  ||| ||||||||||||| |||||||||||||    
T  7045 agcggatataaaccttataactcaaaagcatacatgctatgatatcaaatacatcatcataaaaattctccaaa 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19255 - 19427
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||| |||||||||||| ||||||| |||||||||| |  ||||||||||||||||||  ||||||   | |||||||||| |||||||||||    
T  19255 cgataaaacacacgaataatataaatattcaagaaatagacgctatgtcatcaacaaaatccaaa--caacatttatatataaaaattatcaacagttgc 19352  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||| | |||||| ||| ||||| ||||||||||| ||||  |||||||||||||| ||||||||||||    
T  19353 agcggatatagatcatacatctccaaagtctacatgtcatgagatcaaaatacatcatcatataaattctccaaa 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 25477 - 25639
Alignment:
Q  12 gcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 110  Q
    ||||||||||||| ||||||| ||||||| | ||| ||||||| |||||| |||| |||||||| ||||||||||||||||||||| ||| || ||||||    
T  25477 gcgaataatataaatattcaagaaatagatgtcacgtcatcaataaaatctaaaa-caacatgcatgtataaaaattctcaacagtagcaacgaatataa 25575  T
Q  111 accatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    ||||||||| ||||||| ||||||| |||| | ||  ||||||||||||| |||||||||||||    
T  25576 accatacacttcaaaagcatacatgccatgaggtcaaaatacatcatcataaaaattctccaaa 25639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 84414 - 84469
Alignment:
Q  78 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtataca 133  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||    
T  84414 tataaaaattctcaaaagttgtagcggatataaatcatacacctcaaatgtataca 84469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 25658 - 25732
Alignment:
Q  165 tctccaaaacataaataaatccaggatggacaatctataataaatcataagac-aacatcttagatcagagcctat 239  Q
    |||||| ||| ||||||||||||| ||  |||||||| ||| ||||||||||| |||||| |||||||||||||||    
T  25658 tctccacaacgtaaataaatccagaataaacaatctaaaat-aatcataagacaaacatcctagatcagagcctat 25732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 488 - 623
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||| |||||||||| |||| || |||||||||| |||||||||| |||||||||||| |||||||| | ||||||  |||||||||||||    
T  488 cgataaaacacgcaaataatataaatattgaagaaatagacgctacatcatcaaacaaaatccaaaa-caacatgcatatataaacgttctcaacagttg 586  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatg 135  Q
    |||||||||||||||||| |  ||||||| |||||||    
T  587 cagcggatataaaccatataattcaaaagcatacatg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2230 - 2106
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||| |||||||| ||||||||| ||||||| || || ||||||| |||||||||||  ||||| || | |||||||||||||||||||||     
T  2230 cgataaaacacgtgaataatagaatattcaagaaatagatgctacgtcatcaaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgt 2133  T
Q  100 agcggatataaaccatacacctcaaaa 126  Q
    |||||||||||||||||||| ||||||    
T  2132 agcggatataaaccatacacttcaaaa 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14367 - 14250
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||| | |||||||| || ||||||| ||||||||||| | ||||||| |||||||||||  ||||| || | |||||||||||||||||||||    
T  14367 cgataaaacatgtgaataatagaaatattcaagaaatagacgcctcgtcatcaaacaaaatccaaa--caacaggcatatataaaaattctcaacagttg 14270  T
Q  99 cagcggatataaaccataca 118  Q
    ||||||||||||||||||||    
T  14269 cagcggatataaaccataca 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 99450 - 99326
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || ||||||| |||||||||||| |||||||| ||||||||||| ||||||||| |    
T  99450 cgataaaacacgcgaataatacatatattcaagaaatagacgctacgtcatcaaacaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcg 99353  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    |||||||||||||||||| || |||||    
T  99352 cagcggatataaaccatatacttcaaa 99326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11351 - 11476
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagtt 97  Q
    |||||||||||||||||||   | |||||||| |||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| |||||||||     
T  11351 cgataaaacacgcgaataaagcatatattcaagaaatagacgccacatcatcaattcaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtc 11448  T
Q  98 gcagcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||||| || |||||    
T  11449 gcagcggatataaaccatatacttcaaa 11476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 5001 - 4828
Alignment:
Q  1 cgataaaacacgcgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||||||||||||| | | | |||||| |||||||||| || || ||||||||| |||||| |||||||| | |||||||||||||||| |||||    
T  5001 cgataaaacacgcgaataaaacatttattcaagaaatagacgctacgtcttcaacaaaaaccaaaa-caacatgcatatataaaaattctcaacggttgc 4903  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattctccaaa 172  Q
    |||||||||| | |||||| ||| ||||| |||||| ||||  |||  |||||| |||||| |||||||||||||    
T  4902 agcggatatagatcatacatctccaaagtctacatgccatgaaatcaaaatacaacatcataaaaattctccaaa 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2857 - 2982
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| ||||||| |  || |||||| ||||||||||||| |||||||| ||||||||||||||||||| | |    
T  2857 cgataaaacacgcgaataatacatatattcaagaaatagatgatacgtcatcatacaaaatccaaaa-caacatgcatgtataaaaattctcaacaatcg 2955  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    ||||||||||||||||| ||| |||||    
T  2956 cagcggatataaaccattcacttcaaa 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 123606 - 123520
Alignment:
Q  78 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 163  Q
    |||| |||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  123606 tatataaattctcaatagttgcagcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcataaaa 123520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 29021 - 29143
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    |||||||||||||||| | | |||||||| |||||||||| || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| ||||    
T  29021 taaaacacgcgaataacacatatattcaagaaatagacgctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcag 29119  T
Q  102 cggatataaaccatacacctcaaa 125  Q
    |||||||||| |||| || |||||    
T  29120 cggatataaatcatatacttcaaa 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 99137 - 99027
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-a 161  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||  |||||| ||| ||||||||||||||||| |||| | ||||||||| ||| |    
T  99137 aaacaacatgcatatataaaaattctcaacagtcgcagcggatataagtcatacatctccaaagtatacatgtcatgagatcaatatacatcattatata 99038  T
Q  162 aattctccaaa 172  Q
    |||||||||||    
T  99037 aattctccaaa 99027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 66481 - 66582
Alignment:
Q  24 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 123  Q
    ||||| || |||||||||| || ||||||||||||| ||||  |||||| | || ||||||| |||||||||| ||  | ||||||||||||| || |||    
T  66481 atatttaagaaatagacgctacgtcatcaacaaaattcaaattcaacatacatgcataaaaa-tctcaacagtcgccacagatataaaccatatacttca 66579  T
Q  124 aaa 126  Q
    |||    
T  66580 aaa 66582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 199602 - 199478
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||| ||||| |||||||| |||||||||| || ||||||| |||||||||||| |||||||| |||||||||| | |||||||| |    
T  199602 cgataaaacacgcgaattatatatatattcaagaaatagacgctacgtcatcaaacaaaatccaaaa-caacatgcatgtataaaaa-tgtcaacagtcg 199505  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    ||||||||||||| |||| || |||||    
T  199504 cagcggatataaaacatatacttcaaa 199478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 10199 - 10371
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||   | |||||||| ||||||| || || |  ||||||||| | |||| |||||||| | ||||||| ||||||||||| ||    
T  10199 cgataaaacacgcgaataaagcatatattcaagaaatagatgctacgtattcaacaaaaac-aaaatcaacatgcatatataaaagttctcaacagtcgc 10297  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattctccaaa 172  Q
    |||||||||| | |||||| ||| ||||| |||||| |||| ||||  ||||||||||||| ||||||||||||    
T  10298 agcggatatagatcatacatctccaaagtctacatgccatgagatcaaaatacatcatcattaaattctccaaa 10371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 248056 - 247920
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||| |||| |||||||||||| ||||||| |||||||||| || || |||||||| ||   ||||||||||| | ||||||| ||||||||||| ||    
T  248056 cgataatacacacgaataatataaatattcaagaaatagacgctacgtcttcaacaaattc---aaacaacatgcatatataaaatttctcaacagtcgc 247960  T
Q  100 agcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    |||| ||||||| |||||| ||| ||| ||||||||||||    
T  247959 agcgaatataaatcatacatctccaaaatatacatgtcat 247920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 45840 - 45696
Alignment:
Q  1 cgataaaacacgcgaataatataa-tattcaataaatagacgccacatcatcaaca-aaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||||||| ||||||| |||||||||| || ||||||||| |||||||||  |||||||| | |||||| |||||||||||| |    
T  45840 cgataaaacacgcgaataatataaatattcaaaaaatagacgctacgtcatcaacataaatccaaa--caacatgcatatataaatattctcaacagtcg 45743  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatgggatc 145  Q
    ||| ||||||  | |||||| ||  ||||| |||||| |||| ||||    
T  45742 cagaggatatggatcatacatcttcaaagtctacatgccatgagatc 45696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 73477 - 73371
Alignment:
Q  67 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaat 164  Q
    |||||||| | ||||||||||||||||| | |||||||||||||| |||||| ||| |||||||||||| |||| ||||  |||||||||||||| ||||    
T  73477 caacatgcatatataaaaattctcaacaatcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaat 73378  T
Q  165 tctccaa 171  Q
    |||||||    
T  73377 tctccaa 73371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 25625 - 25514
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcag 101  Q
    ||||||| |||||||||| | |||||||| |||||||||| ||||||||| ||||||| ||||  |||||||| || |||||||| ||||||||| ||||    
T  25625 taaaacatgcgaataatacatatattcaagaaatagacgctacatcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcag 25527  T
Q  102 cggatataaacca 114  Q
    |||||||||||||    
T  25526 cggatataaacca 25514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1115 - 1212
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| ||||| |||| ||||||||| |||||| || |||||||||||| ||||| |||||||||||||||||    
T  1115 cgataaaacacgcgaataatacatatattcaagaaataaacgctacatcatcatacaaaaacc-aaaacaacatgcatgtat-aaaattctcaacagttg 1212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 77650 - 77788
Alignment:
Q  4 taaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaat-ccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||||||||||||| | |||||||| |||||||||| ||||||| | ||||||| |||||| |||||||| ||  ||||||| |||| |||| |||    
T  77650 taaaacacgcgaataataaatatattcaagaaatagacgctacatcattatacaaaattccaaaatcaacatgcatgcttaaaaat-ctcatcagtcgca 77748  T
Q  101 gcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    || ||||||||||||| |  ||||||  ||||||||||||    
T  77749 gcagatataaaccatataattcaaaaacatacatgtcatg 77788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 70559 - 70421
Alignment:
Q  1 cgataaaacacgcgaataat-ataatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||||||||||||| ||||||||||| |||||||||| || |||||| |||| || | |||||||||||| | |||||||  |||||| ||| |    
T  70559 cgataaaacacgcgaataataataatattcaagaaatagacgctacgtcatcatacaagattccaaaacaacatgcatatataaaa--tctcaatagtcg 70462  T
Q  99 cagcgga-tataaaccatacacctcaaaagtatacatgtcat 139  Q
    ||  ||| ||||||||||| | ||| ||| ||||||||||||    
T  70461 caagggattataaaccatata-ctccaaaatatacatgtcat 70421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4661 - 4762
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||||||||||||||| | |||||||| |||||||||| || |||||| ||||| ||||||| |||||||| |||||||||| |||||||||| |    
T  4661 cgattaaacacgcgaataatacatatattcaagaaatagacgctacgtcatcacacaaattccaaaa-caacatgcatgtataaaaa-tctcaacagtcg 4758  T
Q  99 cagc 102  Q
    ||||    
T  4759 cagc 4762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3194 - 3299
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||||||||||||||| | |||||||| ||||||||||  | |||||| ||||| ||||||| |||||||| |||||||||| |||||||||| |    
T  3194 cgattaaacacgcgaataatacatatattcaagaaatagacgcttcgtcatcacacaaattccaaaa-caacatgcatgtataaaaa-tctcaacagtcg 3291  T
Q  99 cagcggat 106  Q
    ||||||||    
T  3292 cagcggat 3299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16178 - 16283
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||||||||||||| | | |||||||| |||||||||| || |||||| ||||| ||||||| |||||| | |||||||||| |||||||||| |    
T  16178 cgattaaacacgcgaataaaacatatattcaagaaatagacgctacgtcatcacacaaattccaaaa-caacatacatgtataaaaa-tctcaacagtcg 16275  T
Q  99 cagcggat 106  Q
    ||||||||    
T  16276 cagcggat 16283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 31902 - 31788
Alignment:
Q  3 ataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    ||||||||||||||||||| | |||||||| || || |||| || ||||||| |||||| | |||||||||||| || |||||||| |||| |||| |||    
T  31902 ataaaacacgcgaataataaatatattcaagaattaaacgctacgtcatcaaacaaaattcgaaaacaacatgcatgcataaaaat-ctcatcagtcgca 31804  T
Q  101 gcggatataaaccata 116  Q
    ||||||||||| ||||    
T  31803 gcggatataaatcata 31788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 25872 - 25747
Alignment:
Q  2 gataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||| ||||||||| | |||||||| |||||||||| || |||||||  ||||| |||||| |||| ||| |||||||||||||||||||||      
T  25872 gataaaacacacgaataatacatatattcaagaaatagacgctacgtcatcaatacaaaaaccaaaa-caacgtgcatgtataaaaattctcaacagtca 25774  T
Q  99 cagcggatataaaccatacacctcaaa 125  Q
    ||   ||||||||||||| || |||||    
T  25773 caattgatataaaccatatacttcaaa 25747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 102054 - 101921
Alignment:
Q  2 gataaaacacgcgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    ||||||||| |||||||||| | |||||||| |||||||||| ||||||||| ||||| ||||||| || |||||  | |||||||| ||||| ||| ||    
T  102054 gataaaacatgcgaataataattatattcaagaaatagacgctacatcatcatacaaattccaaaa-catcatgcaagcataaaaat-ctcaatagtcgc 101957  T
Q  100 agcggatataaaccatacacctcaaaagtatacatg 135  Q
    || |||||||||||||| |  ||||||| |||||||    
T  101956 agtggatataaaccatataattcaaaagcatacatg 101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 106869 - 106730
Alignment:
Q  1 cgataaaacacgcgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||||||||| |||||||||| |||||||||| |||||||||| || |||||| ||||||| | |||  | ||||| | |||||||  |||||||||| |    
T  106869 cgataaaacaagcgaataataataatattcaagaaatagacgctacgtcatcatacaaaattccaaacaatcatgcatatataaaa--tctcaacagtcg 106772  T
Q  99 cagcgga-tataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||| ||||||||||| || |||||| |||||||| ||||    
T  106771 cagcggattataaaccatatacttcaaaa-tatacatgccatg 106730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7400 - 7263
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || | | || |||||||||  ||| ||||||| |||||||||| ||||||  ||      
T  7400 cgataaaacacgcgaataatacatatattcaagaaatagacgctacgtgagcatacaaaatcc--aaataacatgcatgtataaaaa-tctcaattgtca 7304  T
Q  99 cagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    |||||||||||||||||| || || |||||||||||| ||||    
T  7303 cagcggatataaaccatatacttc-aaagtatacatgccatg 7263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 51250 - 51365
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 122  Q
    |||||||| |||||||||| || |||||| ||||||| ||||  |||||||| || |||||||| ||| ||||| ||| ||||||||||||||| || ||    
T  51250 atattcaagaaatagacgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctctacagtcgcaacggatataaaccatatacttc 51348  T
Q  123 aaaagtatacatgtcatg 140  Q
     |||| ||||||||||||    
T  51349 -aaagcatacatgtcatg 51365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 2465 - 2539
Alignment:
Q  64 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    ||||||||||| | ||||||| ||||||||||| |||||||||||||  | |||| | | ||||||||||||||||    
T  2465 aaacaacatgcatatataaaa-ttctcaacagtcgcagcggatataagtcctacatcaccaaagtatacatgtcat 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 24682 - 24547
Alignment:
Q  7 aacacgcgaataatata-atattcaataaatagacgccacatcatcaac-aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcgg 104  Q
    ||||||||||||||| | |||||||| |||||||||| || |||||| | |||||   |||||||||||| || ||| ||||| ||| |||| |||||||    
T  24682 aacacgcgaataatacatatattcaagaaatagacgctacgtcatcagccaaaatttcaaaacaacatgcatgcatataaatt-tcatcagtcgcagcgg 24584  T
Q  105 at-ataaaccatacacctcaaaagtatacatgtcatg 140  Q
    || |||||||||| |  ||||||| ||||||||||||    
T  24583 attataaaccatataattcaaaagcatacatgtcatg 24547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7000 - 7173
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgc 99  Q
    |||||||||||||||||||   | |||||||| |||||||||| ||||| ||| ||||| ||||| |  |||||| | |||||||| | |||||||| ||    
T  7000 cgataaaacacgcgaataaagcatatattcaagaaatagacgctacatcttcagcaaaa-ccaaaca-tacatgcatatataaaaaatttcaacagtcgc 7097  T
Q  100 agcggatat-aaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    || |||||| ||| |||| | ||| ||| ||||||||||||  ||||  |||||||||||||| ||||||||||||    
T  7098 agtggatatgaaatcatatatctccaaaatatacatgtcataagatcaaaatacatcatcatataaattctccaaa 7173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 20037 - 19908
Alignment:
Q  36 tagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacat 134  Q
    ||||||| |||||||||| |||||||||||| |||||||| | ||| ||||| | ||||||| | ||||||||||||||||| || || |||| ||||||    
T  20037 tagacgctacatcatcaaacaaaatccaaaatcaacatgcatatattaaaat-cgcaacagtcgtagcggatataaaccatatacttc-aaagcatacat 19940  T
Q  135 gtcatgggatc-gaatacatcatcataaaatt 165  Q
    | ||||  |||  ||||||| |||||||||||    
T  19939 gccatgatatcaaaatacataatcataaaatt 19908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 29613 - 29484
Alignment:
Q  36 tagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacat 134  Q
    ||||||| |||||||||| |||||||||||| |||||||| | ||| ||||| | ||||||| | ||||||||||||||||| || || |||| ||||||    
T  29613 tagacgctacatcatcaaacaaaatccaaaatcaacatgcatatattaaaat-cgcaacagtcgtagcggatataaaccatatacttc-aaagcatacat 29516  T
Q  135 gtcatgggatc-gaatacatcatcataaaatt 165  Q
    | ||||  |||  ||||||| |||||||||||    
T  29515 gccatgatatcaaaatacataatcataaaatt 29484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9273 - 9414
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaa---aa---caacatgcgtgtataaaaattctcaa 92  Q
    ||||||||||||||||||||| | |||||||| |||||||||| || |||||| | ||||| ||||   ||   |||||||| || ||||||| ||||||    
T  9273 cgataaaacacgcgaataataaatatattcaagaaatagacgctacgtcatcatagaaaattcaaattcaaattcaacatgcatgcataaaaa-tctcaa 9371  T
Q  93 cagttgcagcggatataaaccatacacctcaaaagtatacatg 135  Q
    |||| |||| |||||||||||||| |  ||||||| |||||||    
T  9372 cagtcgcagtggatataaaccatataattcaaaagcatacatg 9414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 12914 - 12777
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatc-aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    ||||||| ||||||||||||| | |||||||| |||||||||| || ||||| ||||||||   |||||||||||| || ||| ||| |||||||||  |    
T  12914 cgataaatcacgcgaataatacatatattcaagaaatagacgctacgtcatcaaacaaaatttcaaaacaacatgcatgcatataaa-tctcaacaggcg 12816  T
Q  99 cagcgga-tataaaccatacacctcaaaagtatacatgt 136  Q
     |||||| ||||||||||| |  ||||||| ||||||||    
T  12815 tagcggattataaaccatataattcaaaagcatacatgt 12777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 11291 - 11411
Alignment:
Q  23 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattc-tcaacagttgcagcggatataaaccatacacct 121  Q
    ||||||||| |||||||||| || || ||||||||    || | |||||||| | ||||||||||| |||| ||  |||||||||||||| |||||| ||    
T  11291 aatattcaagaaatagacgctacgtcttcaacaaat---aacatcaacatgcatatataaaaattcctcaatagccgcagcggatataaatcatacatct 11387  T
Q  122 caaaagtatacatgtcatgggatc 145  Q
    | |||||||||||| |||| ||||    
T  11388 ccaaagtatacatgccatgagatc 11411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 23300 - 23195
Alignment:
Q  69 acatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattc 166  Q
    |||||| | |||||||| | |||||||| |||| ||||||||| |||| | ||| ||| ||||||||||||  ||||  |||||||||||||| ||||||    
T  23300 acatgcatatataaaaaatttcaacagtcgcagtggatataaatcatatatctccaaaatatacatgtcataagatcaaaatacatcatcatataaattc 23201  T
Q  167 tccaaa 172  Q
    ||||||    
T  23200 tccaaa 23195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1234 - 1286
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagacgccacatcatca 52  Q
    |||||||||||||||||||||| ||||||||| |||||||||| || ||||||    
T  1234 cgataaaacacgcgaataatataaatattcaagaaatagacgctacgtcatca 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6488 - 6595
Alignment:
Q  1 cgataaaacacgcgaataatata-atattcaataaatagacgccacatcatcaac-aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 98  Q
    |||| |||| ||||||||||| | |||||||| || ||||||  || |||||||| ||||| ||||| |||||||| |||||||||  |||||||||| |    
T  6488 cgatgaaactcgcgaataataaatatattcaagaattagacgttacgtcatcaaccaaaattcaaaa-caacatgcatgtataaaa--tctcaacagtcg 6584  T
Q  99 cagcggatata 109  Q
    |||||||||||    
T  6585 cagcggatata 6595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 107506 - 107620
Alignment:
Q  3 ataaaacacgcgaataatataat-attcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgca 100  Q
    |||||||| |||||||||| | | |||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||  ||||||||| |||    
T  107506 ataaaacatgcgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaag-ctcaacagtcgca 107604  T
Q  101 gcggatataaaccata 116  Q
    | ||||||||||||||    
T  107605 gtggatataaaccata 107620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 5708 - 5782
Alignment:
Q  66 acaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatg 140  Q
    ||||||| | ||||||||||||| ||||||| |||||||||| | | |||||| |||||| ||||| ||| ||||    
T  5708 acaacatacatgtataaaaattcccaacagtcgcagcggataaatatcatacatctcaaaggtatagatgccatg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3876 - 3917
Alignment:
Q  1 cgataaaacacgcgaataatataatattcaataaatagacgc 42  Q
    ||||||||||  ||||||||||||||||||| ||||||||||    
T  3876 cgataaaacatacgaataatataatattcaagaaatagacgc 3917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 33415 - 33503
Alignment:
Q  24 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 114  Q
    |||||||| |||||||| | || |||||| ||||||| ||||  |||||||| |||| |||   |||||||||| |||||||||||||||||    
T  33415 atattcaagaaatagacactacgtcatcatacaaaattcaaattcaacatgcatgtaaaaa---tctcaacagtcgcagcggatataaacca 33503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 5326 - 5398
Alignment:
Q  67 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 139  Q
    |||||||| | ||||||| || |||||||| ||||  |||||||| |||||| ||| ||| ||||||||||||    
T  5326 caacatgcatatataaaatttatcaacagtcgcagatgatataaatcatacatctccaaaatatacatgtcat 5398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 3537 - 3461
Alignment:
Q  98 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattctccaaa 172  Q
    |||||||||||| | |||||| ||| ||||||||||||||||| ||||  |||||||||| ||| ||||||| ||||    
T  3537 gcagcggatatataacatacatctccaaagtatacatgtcatgagatcaaaatacatcattatataaattcttcaaa 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12724 - 12684
Alignment:
Q  1 cgataaaacacgcgaataatat-aatattcaataaatagac 40  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  12724 cgataaaacacgcgaataatataaatattcaagaaatagac 12684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University