View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19748_low_14 (Length: 519)

Name: NF19748_low_14
Description: NF19748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19748_low_14
NF19748_low_14
[»] chr2 (44 HSPs)
chr2 (15-500)||(30410543-30411030)
chr2 (18-79)||(42327392-42327453)
chr2 (15-79)||(13803513-13803577)
chr2 (17-74)||(4262298-4262355)
chr2 (19-79)||(29503289-29503349)
chr2 (21-79)||(12994376-12994434)
chr2 (19-73)||(37480099-37480153)
chr2 (15-79)||(42922432-42922497)
chr2 (15-79)||(11251105-11251169)
chr2 (19-71)||(26482119-26482170)
chr2 (21-77)||(42860368-42860424)
chr2 (16-79)||(11062378-11062441)
chr2 (15-73)||(19244133-19244191)
chr2 (19-73)||(23052521-23052575)
chr2 (19-73)||(39715016-39715070)
chr2 (17-79)||(42602572-42602634)
chr2 (15-80)||(1435081-1435145)
chr2 (22-71)||(18825367-18825415)
chr2 (19-71)||(6099517-6099568)
chr2 (21-73)||(12086129-12086181)
chr2 (19-71)||(12517751-12517803)
chr2 (15-79)||(16918572-16918636)
chr2 (31-71)||(30359680-30359720)
chr2 (15-79)||(40416384-40416448)
chr2 (22-62)||(41908639-41908679)
chr2 (15-67)||(45026773-45026825)
chr2 (21-76)||(10449043-10449098)
chr2 (16-79)||(19322786-19322849)
chr2 (16-79)||(21195671-21195734)
chr2 (19-73)||(19016055-19016109)
chr2 (19-73)||(21213793-21213847)
chr2 (15-73)||(37755965-37756023)
chr2 (22-79)||(17737625-17737682)
chr2 (22-79)||(28846709-28846766)
chr2 (15-79)||(727634-727698)
chr2 (15-79)||(1729834-1729898)
chr2 (16-80)||(6859307-6859371)
chr2 (41-77)||(7667489-7667525)
chr2 (17-73)||(7799031-7799087)
chr2 (15-71)||(8192474-8192529)
chr2 (19-71)||(26276381-26276433)
chr2 (19-71)||(31681075-31681127)
chr2 (27-71)||(36538874-36538918)
chr2 (19-55)||(40791488-40791524)
[»] chr8 (38 HSPs)
chr8 (15-79)||(6536538-6536602)
chr8 (17-79)||(3624598-3624660)
chr8 (17-73)||(968386-968442)
chr8 (19-79)||(16852358-16852418)
chr8 (15-79)||(18540316-18540380)
chr8 (19-79)||(19703485-19703545)
chr8 (15-74)||(33017237-33017296)
chr8 (16-79)||(43594313-43594376)
chr8 (19-73)||(28783084-28783138)
chr8 (15-80)||(8794339-8794404)
chr8 (31-79)||(2203510-2203558)
chr8 (21-69)||(9126584-9126631)
chr8 (15-79)||(35690058-35690122)
chr8 (16-79)||(11819794-11819857)
chr8 (15-73)||(6436549-6436607)
chr8 (18-79)||(6569768-6569829)
chr8 (26-71)||(26688891-26688936)
chr8 (16-69)||(27750758-27750811)
chr8 (19-71)||(3524399-3524451)
chr8 (19-71)||(6530833-6530884)
chr8 (15-79)||(12988446-12988510)
chr8 (21-73)||(29858049-29858101)
chr8 (16-72)||(44780109-44780165)
chr8 (20-71)||(18897192-18897243)
chr8 (18-73)||(29431035-29431090)
chr8 (17-76)||(34628663-34628722)
chr8 (15-73)||(3305182-3305240)
chr8 (17-67)||(22193360-22193410)
chr8 (15-73)||(23361643-23361701)
chr8 (16-70)||(27871695-27871749)
chr8 (19-73)||(36205219-36205273)
chr8 (15-72)||(13129693-13129750)
chr8 (18-79)||(28566123-28566183)
chr8 (18-79)||(28573746-28573806)
chr8 (36-68)||(11793536-11793568)
chr8 (37-73)||(25389480-25389516)
chr8 (36-76)||(33823086-33823126)
chr8 (19-71)||(40136961-40137012)
[»] chr7 (52 HSPs)
chr7 (15-79)||(26459404-26459468)
chr7 (16-79)||(23552136-23552199)
chr7 (16-79)||(43215202-43215265)
chr7 (15-78)||(7721388-7721451)
chr7 (16-79)||(39631862-39631925)
chr7 (15-73)||(17113819-17113877)
chr7 (19-73)||(22760887-22760941)
chr7 (17-73)||(2446332-2446388)
chr7 (18-78)||(30442507-30442567)
chr7 (15-79)||(33222388-33222452)
chr7 (15-79)||(41519258-41519322)
chr7 (17-72)||(17041008-17041063)
chr7 (19-73)||(20335829-20335883)
chr7 (15-73)||(21558152-21558210)
chr7 (17-71)||(22035424-22035478)
chr7 (19-73)||(43590931-43590985)
chr7 (38-79)||(25021352-25021393)
chr7 (18-71)||(29385740-29385793)
chr7 (17-66)||(48959229-48959278)
chr7 (15-79)||(2962477-2962541)
chr7 (31-71)||(5579244-5579284)
chr7 (19-79)||(7499922-7499982)
chr7 (15-67)||(15137583-15137635)
chr7 (19-79)||(21877826-21877886)
chr7 (18-74)||(30217902-30217958)
chr7 (19-71)||(38374597-38374649)
chr7 (19-79)||(42711976-42712036)
chr7 (31-79)||(42836011-42836059)
chr7 (17-56)||(7309397-7309436)
chr7 (16-79)||(9608624-9608687)
chr7 (16-79)||(9836196-9836259)
chr7 (21-68)||(44628183-44628230)
chr7 (15-61)||(2882986-2883032)
chr7 (16-78)||(5830598-5830660)
chr7 (19-73)||(15905672-15905725)
chr7 (19-73)||(25132376-25132430)
chr7 (15-69)||(29785295-29785349)
chr7 (19-65)||(29916806-29916852)
chr7 (15-73)||(30579359-30579417)
chr7 (15-73)||(33869439-33869497)
chr7 (24-73)||(7801204-7801253)
chr7 (15-72)||(11700190-11700247)
chr7 (15-56)||(13106776-13106817)
chr7 (22-71)||(31835218-31835267)
chr7 (15-56)||(37162344-37162385)
chr7 (17-73)||(5668567-5668623)
chr7 (17-73)||(14058277-14058333)
chr7 (17-73)||(14368305-14368361)
chr7 (16-56)||(18363737-18363777)
chr7 (15-55)||(21570026-21570066)
chr7 (15-79)||(25655222-25655286)
chr7 (43-79)||(25956314-25956350)
[»] chr4 (42 HSPs)
chr4 (15-79)||(37109345-37109409)
chr4 (16-79)||(23377974-23378037)
chr4 (15-73)||(7949448-7949506)
chr4 (19-71)||(32992638-32992690)
chr4 (15-72)||(37274453-37274510)
chr4 (15-79)||(38869786-38869850)
chr4 (16-79)||(7292793-7292856)
chr4 (16-79)||(8030199-8030262)
chr4 (15-72)||(2622389-2622446)
chr4 (15-79)||(10047998-10048062)
chr4 (17-73)||(24234669-24234725)
chr4 (15-79)||(31759652-31759716)
chr4 (19-71)||(46295123-46295175)
chr4 (17-73)||(49576890-49576946)
chr4 (16-71)||(29195121-29195175)
chr4 (17-79)||(13015445-13015507)
chr4 (15-81)||(16581709-16581775)
chr4 (19-73)||(37720212-37720266)
chr4 (19-77)||(37980146-37980203)
chr4 (20-69)||(46329192-46329241)
chr4 (15-79)||(4249195-4249259)
chr4 (15-79)||(19680782-19680846)
chr4 (19-79)||(30938217-30938277)
chr4 (21-73)||(51250522-51250574)
chr4 (19-71)||(56409977-56410028)
chr4 (19-70)||(39509097-39509148)
chr4 (17-79)||(2185028-2185090)
chr4 (19-73)||(19238575-19238629)
chr4 (15-73)||(19531996-19532054)
chr4 (21-55)||(31826651-31826685)
chr4 (15-61)||(51622521-51622567)
chr4 (15-73)||(53496901-53496959)
chr4 (19-73)||(55427198-55427252)
chr4 (16-69)||(8306513-8306566)
chr4 (19-76)||(21344838-21344894)
chr4 (15-79)||(1730483-1730547)
chr4 (19-71)||(8325377-8325429)
chr4 (25-73)||(17618305-17618353)
chr4 (22-54)||(21775923-21775955)
chr4 (15-79)||(46545729-46545793)
chr4 (31-71)||(47202433-47202473)
chr4 (17-73)||(51948504-51948560)
[»] chr6 (22 HSPs)
chr6 (16-79)||(12188298-12188361)
chr6 (21-73)||(10338174-10338226)
chr6 (17-71)||(28841440-28841494)
chr6 (17-73)||(33549128-33549184)
chr6 (19-73)||(21418494-21418548)
chr6 (18-67)||(23910108-23910157)
chr6 (17-73)||(6385886-6385942)
chr6 (16-68)||(20213070-20213122)
chr6 (16-68)||(22107093-22107145)
chr6 (17-73)||(34786450-34786506)
chr6 (16-71)||(20863401-20863456)
chr6 (15-73)||(4105075-4105133)
chr6 (15-73)||(6776601-6776659)
chr6 (15-73)||(14278105-14278163)
chr6 (31-73)||(31623001-31623043)
chr6 (19-73)||(34444827-34444881)
chr6 (20-73)||(1906517-1906570)
chr6 (15-56)||(15951296-15951337)
chr6 (15-80)||(28363954-28364019)
chr6 (15-79)||(1056679-1056743)
chr6 (17-73)||(12234503-12234559)
chr6 (19-71)||(14557988-14558040)
[»] chr5 (24 HSPs)
chr5 (19-79)||(30883196-30883256)
chr5 (15-72)||(14285186-14285243)
chr5 (15-79)||(25627075-25627139)
chr5 (15-79)||(34984824-34984888)
chr5 (15-79)||(37258360-37258424)
chr5 (19-70)||(84851-84902)
chr5 (16-79)||(21549132-21549195)
chr5 (19-73)||(16457834-16457888)
chr5 (15-73)||(16773831-16773889)
chr5 (15-80)||(43442213-43442278)
chr5 (15-79)||(29075799-29075863)
chr5 (22-79)||(16436636-16436692)
chr5 (15-79)||(7918463-7918527)
chr5 (15-79)||(18595995-18596059)
chr5 (16-76)||(25979191-25979251)
chr5 (17-55)||(15416215-15416253)
chr5 (21-71)||(15485420-15485469)
chr5 (26-79)||(892479-892532)
chr5 (19-68)||(3315244-3315293)
chr5 (16-73)||(17028259-17028316)
chr5 (17-73)||(8278271-8278327)
chr5 (19-71)||(16172982-16173033)
chr5 (15-79)||(22737100-22737164)
chr5 (21-73)||(30109308-30109360)
[»] chr1 (48 HSPs)
chr1 (15-79)||(4566566-4566630)
chr1 (15-79)||(8177176-8177240)
chr1 (15-79)||(9165189-9165253)
chr1 (19-71)||(31605846-31605898)
chr1 (15-79)||(33700767-33700831)
chr1 (15-79)||(36371488-36371552)
chr1 (15-78)||(10526842-10526905)
chr1 (18-73)||(15786317-15786372)
chr1 (19-73)||(19528325-19528379)
chr1 (15-73)||(27476765-27476823)
chr1 (15-76)||(31049634-31049695)
chr1 (15-79)||(2799880-2799944)
chr1 (15-55)||(8904456-8904496)
chr1 (15-79)||(17745250-17745314)
chr1 (15-79)||(31794258-31794322)
chr1 (19-71)||(43445989-43446041)
chr1 (16-79)||(6122812-6122875)
chr1 (17-72)||(50901607-50901662)
chr1 (15-73)||(3265948-3266006)
chr1 (19-73)||(52029935-52029989)
chr1 (19-68)||(17297013-17297062)
chr1 (20-73)||(40257423-40257476)
chr1 (19-71)||(4824997-4825049)
chr1 (15-79)||(6650613-6650677)
chr1 (17-77)||(12587290-12587350)
chr1 (15-79)||(21547474-21547538)
chr1 (36-80)||(44046163-44046207)
chr1 (15-79)||(51703797-51703861)
chr1 (15-79)||(52336768-52336832)
chr1 (16-79)||(11063574-11063637)
chr1 (17-68)||(12370192-12370243)
chr1 (24-79)||(21184391-21184446)
chr1 (18-73)||(31383795-31383850)
chr1 (15-61)||(1247149-1247195)
chr1 (19-73)||(16169976-16170030)
chr1 (19-73)||(24047100-24047154)
chr1 (17-55)||(51814536-51814574)
chr1 (19-73)||(52116779-52116833)
chr1 (19-80)||(12259277-12259338)
chr1 (20-73)||(37400298-37400351)
chr1 (19-71)||(952537-952589)
chr1 (19-71)||(6127985-6128036)
chr1 (19-79)||(17410249-17410309)
chr1 (23-67)||(21392867-21392911)
chr1 (19-79)||(25494067-25494127)
chr1 (19-71)||(36428738-36428790)
chr1 (20-56)||(38947471-38947507)
chr1 (19-71)||(39714777-39714828)
[»] chr3 (41 HSPs)
chr3 (16-78)||(37788460-37788522)
chr3 (15-72)||(10445133-10445190)
chr3 (15-78)||(28703398-28703461)
chr3 (16-79)||(32651433-32651496)
chr3 (17-79)||(14186666-14186727)
chr3 (18-79)||(30311324-30311385)
chr3 (15-80)||(46518645-46518710)
chr3 (15-79)||(4222159-4222223)
chr3 (15-79)||(16354886-16354950)
chr3 (19-71)||(16900679-16900731)
chr3 (15-79)||(27093355-27093419)
chr3 (13-73)||(47860780-47860839)
chr3 (15-79)||(53412963-53413027)
chr3 (19-71)||(54990728-54990780)
chr3 (15-73)||(27259185-27259243)
chr3 (16-70)||(30510194-30510248)
chr3 (15-56)||(8796087-8796128)
chr3 (15-56)||(36010783-36010824)
chr3 (19-71)||(19716223-19716275)
chr3 (17-73)||(21960575-21960631)
chr3 (15-67)||(39253727-39253779)
chr3 (17-73)||(40063643-40063699)
chr3 (19-79)||(47454615-47454675)
chr3 (17-73)||(51903874-51903930)
chr3 (16-79)||(8075122-8075185)
chr3 (26-73)||(17554795-17554842)
chr3 (19-73)||(14339634-14339688)
chr3 (15-69)||(15048055-15048109)
chr3 (21-71)||(35623267-35623316)
chr3 (19-73)||(47236969-47237023)
chr3 (15-77)||(53863862-53863923)
chr3 (16-73)||(2667886-2667943)
chr3 (17-66)||(20501727-20501776)
chr3 (20-77)||(26411565-26411622)
chr3 (16-73)||(36720405-36720462)
chr3 (17-70)||(44743851-44743904)
chr3 (16-56)||(3427548-3427588)
chr3 (17-73)||(4844507-4844563)
chr3 (17-73)||(4870203-4870259)
chr3 (21-73)||(8051238-8051290)
chr3 (19-71)||(42799746-42799797)
[»] scaffold0258 (1 HSPs)
scaffold0258 (17-73)||(15319-15375)
[»] scaffold0180 (1 HSPs)
scaffold0180 (15-79)||(19956-20020)
[»] scaffold0299 (1 HSPs)
scaffold0299 (15-73)||(11552-11610)
[»] scaffold0194 (1 HSPs)
scaffold0194 (17-73)||(13042-13098)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-79)||(94965-95029)
[»] scaffold0063 (1 HSPs)
scaffold0063 (15-78)||(35383-35446)
[»] scaffold0074 (1 HSPs)
scaffold0074 (15-73)||(45753-45811)
[»] scaffold0126 (1 HSPs)
scaffold0126 (15-79)||(25341-25405)
[»] scaffold0065 (1 HSPs)
scaffold0065 (15-71)||(12215-12271)
[»] scaffold0238 (1 HSPs)
scaffold0238 (15-58)||(2705-2748)
[»] scaffold0291 (1 HSPs)
scaffold0291 (19-73)||(2468-2522)
[»] scaffold0172 (1 HSPs)
scaffold0172 (19-73)||(15775-15829)
[»] scaffold1367 (1 HSPs)
scaffold1367 (16-73)||(835-892)
[»] scaffold0517 (1 HSPs)
scaffold0517 (20-73)||(7725-7778)
[»] scaffold0009 (2 HSPs)
scaffold0009 (20-73)||(19846-19899)
scaffold0009 (21-73)||(145913-145965)
[»] scaffold0221 (1 HSPs)
scaffold0221 (19-71)||(2907-2959)
[»] scaffold0122 (1 HSPs)
scaffold0122 (23-79)||(6921-6977)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-79)||(81562-81622)


Alignment Details
Target: chr2 (Bit Score: 400; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 15 - 500
Target Start/End: Original strand, 30410543 - 30411030
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactattgtagcatttgagtgaatcaaacttaatttcctt 114  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30410543 cagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaataccactattgtagcatttgagtgaatcaaacttaatttcctt 30410642  T
Q  115 gtnnnnnnnnnnnnnnntaagttctcaacagcacaaaaagaatcct--aagtcaagtttatgtggccaaaaagaacaaagagcctgaagtggtgaacctt 212  Q
    ||               |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30410643 gtaaaaaatttaaaaaataagttctcaacagcacaaaaagaatcctcaaagtcaagtttatgtggccaaaaagaacaaagagcctgaagtggtgaacctt 30410742  T
Q  213 gagggttcagcatcaaaggttagaaaccaggatgatattaatcttgaaatagaggttaatgaagaactgacaaaaaggagagaagatatagcaaaagttt 312  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30410743 gagggttcagcatcaaagattagaaaccaggatgatattaatcttgaaatagaggttaatgaagaactgacaaaaaggagagaagatatagcaaaagttt 30410842  T
Q  313 caatgaaaagtcataaggtgagtaacagggcacaaagtctgaatcaaggtaaaacaatgattgaagattctggaagcactaatggttcaaaatttgttga 412  Q
     |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30410843 gaatgaaaaatcatgaggtgagtaacagggcacaaagtctgaatcaaggtaaaacaatgattgaagattctggaagcactaatggttcaaaatttgttga 30410942  T
Q  413 tgctacacaacaagtcaattatgaaaatgaagattctgagaataatgcaagtgaagaggaggaggttgcatcagagaacagtgctaat 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30410943 tgctacacaacaagtcaattatgaaaatgaagattctgagaataatgcaagtgaagaggaggaggttgcatcagaaaacagtgctaat 30411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 42327392 - 42327453
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 42327453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 13803577 - 13803513
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| |||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  13803577 cagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcacta 13803513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 4262298 - 4262355
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatat 74  Q
    ||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaatat 4262355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 29503349 - 29503289
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||||| |||||| |||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccacta 29503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 12994376 - 12994434
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||| ||||| |||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccacta 12994434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 37480153 - 37480099
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaata 37480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 42922497 - 42922432
Alignment:
Q  15 cagagagaatcgaacttgagtcctt-gaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| |||| ||||||||||||||||| |||| ||||||||||| |||||    
T  42922497 cagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccacta 42922432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 11251169 - 11251105
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| ||| |||| ||||||||||||||||||| | | |||||||||||||| |||||    
T  11251169 cagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccacta 11251105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 26482170 - 26482119
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  26482170 gagaatcgaacctgagaccttgag-aggagcacactcctaggtcccaagccaa 26482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 42860424 - 42860368
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcac 77  Q
    |||||||||||||| ||| ||||||||||||||||| ||||| |||| |||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcac 42860368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 11062441 - 11062378
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||| ||| |||| |||||||||| |||||||||| | || |||||||||||||||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcacta 11062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 19244191 - 19244133
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||||| ||||||||||||||  |||||||||| |||||    
T  19244191 cagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaata 19244133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23052521 - 23052575
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| |||||||||| |||||||||| | ||||||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaata 23052575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39715070 - 39715016
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||| ||||||||||||||||| |||||||||| |||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaata 39715016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 42602634 - 42602572
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||| ||| | || ||||||| ||||||||||||| |||||||||||||||| |||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccacta 42602572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 1435145 - 1435081
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||  |||||||||| || ||||||    
T  1435145 cagagagaatcgaact-gagaccttgaggagaagcacactcctaaatcccaagccagtaccactat 1435081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 18825415 - 18825367
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  18825415 aatcaaacttgagaccttgag-aggagcacactcctaggtcccaagccaa 18825367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6099517 - 6099568
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  6099517 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaa 6099568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 12086129 - 12086181
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||  ||| ||||||||||||||||||| | ||||||||||||||||    
T  12086129 gaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaata 12086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12517751 - 12517803
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||| ||| |||| ||||||||||||||| ||||| ||||||||||||||    
T  12517751 gagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaa 12517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 16918572 - 16918636
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| ||| | || ||||||||||||||||||||| || |||||| |||||| |||||    
T  16918572 cagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccacta 16918636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 30359720 - 30359680
Alignment:
Q  31 tgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  30359720 tgagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 40416384 - 40416448
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| |||| |||||||||| ||||| |||| ||||| ||||| |||||    
T  40416384 cagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccacta 40416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 41908639 - 41908679
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacactcctaggtc 62  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  41908639 aatcgaacttgagaccttgaggaggagcacactccaaggtc 41908679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 45026825 - 45026773
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaag 67  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||| || |||||    
T  45026825 cagagagaatcaaacatgagaccttgaggaggagcacactcctaagttccaag 45026773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 10449098 - 10449043
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatca 76  Q
    ||||||||| |||  |||||||||||||||||||||||| || |||| ||||||||    
T  10449098 gaatcgaacatgaaaccttgaggaggagcacactcctagatcacaagtcaatatca 10449043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 19322849 - 19322786
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||| |||  ||| |||||| |||||||||||||| ||||||||| |||||| |||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccacta 19322786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21195671 - 21195734
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| ||||||||| |||| ||||||||||||||||||||| | || ||||||| ||| |||||    
T  21195671 agagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccacta 21195734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 19016109 - 19016055
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||| |||||||| ||| ||||||||||||||||| | ||| ||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaata 19016055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21213847 - 21213793
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| |||  ||||||| |||||||| ||||||||||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaata 21213793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 37755965 - 37756023
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||| || ||||||||||| ||| ||| ||||||||| ||| ||||||||||||||||    
T  37755965 cagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaata 37756023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 17737625 - 17737682
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||| |||| ||||||||||||||||||||| | ||| ||| |||||| |||||    
T  17737625 aatcgaacatgagaccttgaggaggagcacactcccaagtcacaaaccaataccacta 17737682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 28846766 - 28846709
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||| |||| | | ||||||||||||||||| |||||||||| ||||| |||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccacta 28846709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 727634 - 727698
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||    ||||||| || ||||||||| ||||||||||||||| |||||    
T  727634 cagagagaatcgaacatgaaattttgaggacgaacacactcctcggtcccaagccaataacacta 727698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 1729898 - 1729834
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| ||  | || ||| ||||||||||||||||| | |||||||||||||| |||||    
T  1729898 cagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaataccacta 1729834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 6859307 - 6859371
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    |||||||||||||| |||| | |||| |||||||||||||| |  || |||| ||||||||||||    
T  6859307 agagagaatcgaacctgagactttgaagaggagcacactcccatatcacaagtcaatatcactat 6859371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 7667489 - 7667525
Alignment:
Q  41 aggaggagcacactcctaggtcccaagccaatatcac 77  Q
    |||||||||||||||| | ||||||||||||||||||    
T  7667489 aggaggagcacactcccaagtcccaagccaatatcac 7667525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 7799031 - 7799087
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||  ||||  || ||||||||||||||||| | ||||||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaata 7799087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 8192474 - 8192529
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||| ||||||||| |||| ||||||| ||||||||||||| || |||||||||||    
T  8192474 cagagggaatcgaacctgagaccttgag-aggagcacactccaagatcccaagccaa 8192529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 26276433 - 26276381
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||| ||||| |||| ||||||||||||||||||| | ||| ||||||||||    
T  26276433 gagaaacgaacctgagaccttgaggaggagcacactacaaggccccaagccaa 26276381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31681127 - 31681075
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| | |||||||| |||||||||| ||||| ||||||||    
T  31681127 gagaatcgaacctgagactttgaggagaagcacactccaaggtctcaagccaa 31681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 36538918 - 36538874
Alignment:
Q  27 aacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||| ||||||||| ||||||| ||| ||||||||||||||    
T  36538918 aacttgagaccttgaggaagagcacattccaaggtcccaagccaa 36538874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 40791488 - 40791524
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactc 55  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40791488 gagaatcgaacttgagaccttgagaaggagcacactc 40791524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 6536602 - 6536538
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  6536602 cagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 3624660 - 3624598
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||| |||| |||||| |||||||||||||| |||||||||||||||| |||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccacta 3624598  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 968442 - 968386
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 968386  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 16852418 - 16852358
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||| |||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacta 16852358  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 18540380 - 18540316
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| |||||||||| || ||||||| |||||||||||||||| |||||    
T  18540380 cagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccacta 18540316  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 19703485 - 19703545
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||||||||||||||||||||  |||||||||||||||| |||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacta 19703545  T

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Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 33017296 - 33017237
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatat 74  Q
    ||||||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||||    
T  33017296 cagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatat 33017237  T

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Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 43594313 - 43594376
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||| |||||||||||| |||| |||||| ||| |||||||||||||||    
T  43594313 agagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaatatcacta 43594376  T

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Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28783138 - 28783084
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaata 28783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 8794339 - 8794404
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    ||||||||||||||| |||| || |||||||||||||||| | |||| ||||||||||| ||||||    
T  8794339 cagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccactat 8794404  T

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Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 2203558 - 2203510
Alignment:
Q  31 tgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 2203510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 9126584 - 9126631
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcc 69  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9126584 gaatcgaacttgagtccttgag-aggagcacactccaaggtcccaagcc 9126631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 35690058 - 35690122
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||| || || || ||||||||||||| |||||    
T  35690058 cagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccacta 35690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 11819857 - 11819794
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| ||||||||| |||| ||||||||||||||||||||| | |||||||||| ||| |||||    
T  11819857 agagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 11819794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 6436549 - 6436607
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||| ||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||    
T  6436549 cagagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaata 6436607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 6569768 - 6569829
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||| |||  |||  |||||||||||||||| || |||||||||||||||||||    
T  6569768 agagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcacta 6569829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 26688936 - 26688891
Alignment:
Q  26 gaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaa 26688891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 27750811 - 27750758
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcc 69  Q
    |||| ||||||||| |||| ||||||||||||||||||||| | ||||||||||    
T  27750811 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 27750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 3524399 - 3524451
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||| |||| | || ||||||||||||||||||||| ||||||||||||||    
T  3524399 gagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6530884 - 6530833
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| | ||||| ||||||||||||||||||||||||||||    
T  6530884 gagaatcgaacctgagacattgag-aggagcacactcctaggtcccaagccaa 6530833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 12988510 - 12988446
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||| ||||||| |||  ||||||||||||||||||| | |||| ||||||||||| |||||    
T  12988510 cagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccacta 12988446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 29858049 - 29858101
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||| |||| ||| |||||||||||||||||  |||||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaata 29858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 44780109 - 44780165
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    |||| ||||| ||| |||| ||||||||||||||||||||| | |||||||||||||    
T  44780109 agagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 18897243 - 18897192
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||| |||| ||||||||||||||||||||  ||||||||| ||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaa 18897192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 29431090 - 29431035
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||| |||| |||  |||||||||||||||| | ||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaata 29431035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 34628722 - 34628663
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatca 76  Q
    ||||||||||||| |||| | |||||||| | |||||||| || ||||||||||||||||    
T  34628722 gagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaatatca 34628663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 3305182 - 3305240
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||| ||||||| ||||| |||||||||||||||| |||| || |||||| ||||||    
T  3305182 cagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaata 3305240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 22193360 - 22193410
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaag 67  Q
    ||||||||||||| | || ||||||||||||||||||||| ||| ||||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaag 22193410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 23361643 - 23361701
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||| |||| |||| ||||||||||||||||||||| |  ||||||| |||||    
T  23361643 cagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaata 23361701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 27871749 - 27871695
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcca 70  Q
    ||||||||||||||||||| | |||||||||| || ||||| || ||||||||||    
T  27871749 agagagaatcgaacttgagactttgaggaggaacaaactccaagatcccaagcca 27871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 36205273 - 36205219
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||||||||||||||||||| || || ||| ||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaata 36205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 13129750 - 13129693
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||||| |||  |||||||||||||| |||||| | ||||||| |||||    
T  13129750 cagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaat 13129693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28566183 - 28566123
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||| |||| ||||||| ||||||||||||  ||||||||| |||||| |||||    
T  28566183 agagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccacta 28566123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28573806 - 28573746
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||| |||| ||||||| ||||||||||||  ||||||||| |||||| |||||    
T  28573806 agagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaataccacta 28573746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 11793536 - 11793568
Alignment:
Q  36 ccttgaggaggagcacactcctaggtcccaagc 68  Q
    ||||||||||||||||||||| |||||||||||    
T  11793536 ccttgaggaggagcacactccaaggtcccaagc 11793568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 25389516 - 25389480
Alignment:
Q  37 cttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  25389516 cttgaagaggagcatactcctaggtcccaagccaata 25389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 33823086 - 33823126
Alignment:
Q  36 ccttgaggaggagcacactcctaggtcccaagccaatatca 76  Q
    ||||||||||||||||||||  ||||| |||||||||||||    
T  33823086 ccttgaggaggagcacactctcaggtctcaagccaatatca 33823126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 40136961 - 40137012
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||| ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  40136961 gagaatcaaacctgagaccttgag-aggagcacactccaaggtcccaagccaa 40137012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 26459404 - 26459468
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  26459404 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 26459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 23552199 - 23552136
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcacta 23552136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 43215265 - 43215202
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccacta 43215202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 7721451 - 7721388
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    ||||||||||||||| |||| ||||||||||||| ||||||| ||||||||| |||||| ||||    
T  7721451 cagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccact 7721388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 39631925 - 39631862
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||| ||||||||||||||  ||||| |||||||||||||||| |||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccacta 39631862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 17113877 - 17113819
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||| | |||||||||    
T  17113877 cagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaata 17113819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 22760941 - 22760887
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaata 22760887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 2446388 - 2446332
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||||||  || ||||||||||||||||| | ||||||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaata 2446332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 30442567 - 30442507
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    |||||||||||| | || ||||||||||||||| ||||| |||||||||||||||| ||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 33222452 - 33222388
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||| ||| ||||| | |||||||||||||||| |||||    
T  33222452 cagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccacta 33222388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 41519258 - 41519322
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||  ||||||| ||||| |||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccacta 41519322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 17041008 - 17041063
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||| |||| ||||||||||||||||||| | || ||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaat 17041063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20335829 - 20335883
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||| ||||||||||||||||| | ||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaata 20335883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 21558210 - 21558152
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||||||||||||||||| || ||||| ||||| |||||    
T  21558210 cagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaata 21558152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 22035478 - 22035424
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||||| || ||||| ||||||||||||||||  ||||||||||||||    
T  22035478 gagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaagccaa 22035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 43590985 - 43590931
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| | ||||||||||||||||||| | ||||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaata 43590931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 25021352 - 25021393
Alignment:
Q  38 ttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  25021352 ttgaggaggagcacactcccaggtcccaagccaataccacta 25021393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 29385740 - 29385793
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||| ||| |||| ||||||||||||||||||||| | ||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaa 29385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 48959278 - 48959229
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaa 66  Q
    ||||||||||||| |||| |||||||||||| ||||||| ||||||||||    
T  48959278 gagagaatcgaacatgagaccttgaggaggaacacactcataggtcccaa 48959229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2962541 - 2962477
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| ||||  |||||||||||||||||||  |||| |||| |||||| |||||    
T  2962541 cagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccacta 2962477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 5579244 - 5579284
Alignment:
Q  31 tgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  5579244 tgagaccttgaggaggagcacactccaaggtcccaagccaa 5579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 7499922 - 7499982
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||| || |||||||| ||||  ||||||||||||||||||||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcacta 7499982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 15137635 - 15137583
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaag 67  Q
    ||||||||||| ||| |||| |||||||||||||||||||||||  |||||||    
T  15137635 cagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaag 15137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 21877886 - 21877826
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| |||| ||||||||||| |||| |||||||||| ||||| |||||    
T  21877886 gagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccacta 21877826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 30217958 - 30217902
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatat 74  Q
    ||||||||||||||||| ||||||||||||||||||| | || |  |||||||||||    
T  30217958 agagaatcgaacttgagaccttgaggaggagcacacttccagatatcaagccaatat 30217902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 38374597 - 38374649
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| | || ||||||||||||||||||||  ||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaa 38374649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 42712036 - 42711976
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||||||||||||||||||||| | || |||||| |||| |||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccacta 42711976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 42836011 - 42836059
Alignment:
Q  31 tgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||    
T  42836011 tgaggccttgaggaagagcacactcccaggtcccaagccaataccacta 42836059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 7309436 - 7309397
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  7309436 gagagaatcgaacttgagacctcgaggaggagcacactcc 7309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 9608624 - 9608687
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| ||||  |||||||||||| ||||||| || ||||||||| ||| |||||    
T  9608624 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccacta 9608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 9836196 - 9836259
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| ||||  |||||||||||| ||||||| || ||||||||| ||| |||||    
T  9836196 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccacta 9836259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 44628183 - 44628230
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagc 68  Q
    ||||| |||||||| | ||||||||||||||||||| |||||||||||    
T  44628183 gaatcaaacttgagactttgaggaggagcacactccaaggtcccaagc 44628230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 2883032 - 2882986
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggt 61  Q
    |||||||||| |||| |||| ||||||||||||||||||||| ||||    
T  2883032 cagagagaattgaacctgagaccttgaggaggagcacactccaaggt 2882986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 5830598 - 5830660
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    ||||| ||||||||||||   |||||||||||| ||||||| |||| |||| |||||||||||    
T  5830598 agagataatcgaacttgaaatcttgaggaggagtacactcccaggttccaaaccaatatcact 5830660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 15905672 - 15905725
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| |||  |||||||||||||||| ||||||||||||||||    
T  15905672 gagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaata 15905725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 25132376 - 25132430
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| |||| || |||||||||||||||||||| ||| |||||    
T  25132376 gagaatcgaacctgagaccttaagaaggagcacactcctaggtcctaagtcaata 25132430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 29785295 - 29785349
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcc 69  Q
    |||| |||||||||| |||| ||||||||||||||||||| | || |||||||||    
T  29785295 cagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcc 29785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 29916806 - 29916852
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtccca 65  Q
    ||||||||||| |||| |||||||||||||||||||| ||| |||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcacactcttagatccca 29916852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 30579417 - 30579359
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||| |||||||| |||| ||||||||||| | ||||||| ||||| ||||||||||    
T  30579417 cagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaata 30579359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 33869439 - 33869497
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||  ||| ||||||| ||||||||||| | ||||| ||||||||||    
T  33869439 cagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaata 33869497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 7801253 - 7801204
Alignment:
Q  24 tcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||| |||| |||||| |||||||||||||| |||||||||| |||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaata 7801204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 11700247 - 11700190
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||||| |||| ||||||||||||||| ||||  | ||| |||||||||    
T  11700247 cagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaat 11700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 13106776 - 13106817
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    ||||||||||||||| |||| ||||||||||||| |||||||    
T  13106776 cagagagaatcgaacctgagaccttgaggaggagtacactcc 13106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 31835267 - 31835218
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||| |||| ||||||||||||||||||||| ||  ||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaa 31835218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 37162344 - 37162385
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||||||||||||| ||||||| || ||||||||||    
T  37162344 cagagagaatcgaacttgagaccttgagaagaagcacactcc 37162385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5668567 - 5668623
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| | |||| ||| ||||||||||||||| | | ||||||||||||||    
T  5668567 gagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaata 5668623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 14058333 - 14058277
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||||||||| ||||||||||  |||| ||||| |||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaata 14058277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 14368361 - 14368305
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||||||||| ||||||||||  |||| ||||| |||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaata 14368305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 18363777 - 18363737
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||| ||| |||| |||||||||||||||||||||    
T  18363777 agagagaatcaaacctgagaccttgaggaggagcacactcc 18363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 21570026 - 21570066
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactc 55  Q
    |||||| ||||||||||||| |||||||||||||| |||||    
T  21570026 cagagaaaatcgaacttgagaccttgaggaggagcgcactc 21570066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 25655222 - 25655286
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||  |||||||||||| |||||||  || ||||||| ||||| |||||    
T  25655222 cagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccacta 25655286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 25956314 - 25956350
Alignment:
Q  43 gaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||||||||||||||| |||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccacta 25956350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 37109345 - 37109409
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  37109345 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 37109409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 23378037 - 23377974
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 7949448 - 7949506
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  7949448 cagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaata 7949506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32992690 - 32992638
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 37274453 - 37274510
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||    
T  37274453 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 38869850 - 38869786
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||| |||||    
T  38869850 cagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccacta 38869786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 7292793 - 7292856
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| |||| | ||||||||||||||||||| |||| ||||||||||| |||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccacta 7292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8030199 - 8030262
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| |||||||||||||| ||||||||||||||||||||| | |||||||||| ||| |||||    
T  8030199 agagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 8030262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 2622389 - 2622446
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||||| |||| | | ||||||||||||||||| |||||||||||||||    
T  2622389 cagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 10048062 - 10047998
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| || |||| ||||||| |||| ||||||||||||||||| |||||    
T  10048062 cagagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaataccacta 10047998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 24234725 - 24234669
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||||| |||| |||| ||||||||||| | ||||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaata 24234669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 31759652 - 31759716
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| |||||||||  |||| ||||||||||||||||||||| | |||||||||||||| |||||    
T  31759652 cagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccacta 31759716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 46295175 - 46295123
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||||||||||||||||||||| | ||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 49576890 - 49576946
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||| |||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaata 49576946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 29195175 - 29195121
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  29195175 agagagaatcgaacttgcgaccttgag-aggagcacactccaaggtcccaagccaa 29195121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 13015507 - 13015445
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||| |||| | | ||||||||||||||||| | |||||||||||||| |||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccacta 13015445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 16581775 - 16581709
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactatt 81  Q
    |||||| ||| |||| |||| ||||||||||||||| ||||| |||| ||||||||||| |||||||    
T  16581775 cagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccactatt 16581709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 37720212 - 37720266
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| || | ||||||||||| ||||||||| ||||||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaata 37720266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 37980146 - 37980203
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcac 77  Q
    ||||||||||| |||| ||||||| ||||||||||||| |||||||||||||| |||||    
T  37980146 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcac 37980203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 46329241 - 46329192
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcc 69  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4249259 - 4249195
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |  ||||||||| ||| |||||    
T  4249259 cagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccacta 4249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19680782 - 19680846
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| | || ||||||||| ||||||||||| | ||||||||| |||| |||||    
T  19680782 cagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccacta 19680846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 30938217 - 30938277
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||| ||||||||||||||||| || |||||| |||||| |||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccacta 30938277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 51250522 - 51250574
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||  ||||||| |||||||||||| || |||||||||||||    
T  51250522 gaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaata 51250574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 56410028 - 56409977
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  56410028 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaa 56409977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 39509148 - 39509097
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcca 70  Q
    ||||||||||| |||| ||| ||||||||||||||||| || ||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 39509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 2185028 - 2185090
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||| |||| | ||||| ||||||||||||| |||| |||||||| || |||||    
T  2185028 gagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccacta 2185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 19238575 - 19238629
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||  ||| ||| ||||||||||||||||| | ||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaata 19238629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 19531996 - 19532054
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||   ||| ||||||||||| |||||| ||||||||||||||    
T  19531996 cagagagaatcgaacctgaaaacttaaggaggagcacgctcctatgtcccaagccaata 19532054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 31826685 - 31826651
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactc 55  Q
    |||||||||||||| ||||||||||||||||||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactc 31826651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 51622567 - 51622521
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggt 61  Q
    |||||||| |||||| |||| ||||||||||||||||||||| ||||    
T  51622567 cagagagagtcgaacctgagaccttgaggaggagcacactccaaggt 51622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 53496959 - 53496901
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| ||  |||| | ||||||||||||||||||| ||||||||| ||||||    
T  53496959 cagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaata 53496901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 55427198 - 55427252
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||| ||| ||||||| ||||| ||||||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaata 55427252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 8306566 - 8306513
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcc 69  Q
    |||||||||||||||| || | | ||||||||||||||||| ||||| ||||||    
T  8306566 agagagaatcgaacttaagacttcgaggaggagcacactcccaggtctcaagcc 8306513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 21344894 - 21344838
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatca 76  Q
    |||||| |||| |||| ||||||| ||||||||||||| |||||||||||||| ||||    
T  21344894 gagaattgaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatca 21344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 1730483 - 1730547
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||| |||  |||| | |||| |||||||||||||  |||||||||||||||| |||||    
T  1730483 cagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccacta 1730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 8325377 - 8325429
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| | || ||||||||| ||||||||||| ||||| ||||||||    
T  8325377 gagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaa 8325429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 17618353 - 17618305
Alignment:
Q  25 cgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||| |||| ||| ||||||||||||||||| ||||| ||||||||||    
T  17618353 cgaacatgagacctcgaggaggagcacactcccaggtctcaagccaata 17618305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 21775923 - 21775955
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacact 54  Q
    ||||||||||||| |||||||||||||||||||    
T  21775923 aatcgaacttgagaccttgaggaggagcacact 21775955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 46545793 - 46545729
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| |||||||  ||||  |||||||||||||||||||  ||||| |||||||||| |||||    
T  46545793 cagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccacta 46545729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 47202433 - 47202473
Alignment:
Q  31 tgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||| ||||||||||||||||||||| |||| |||||||||    
T  47202433 tgagaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 51948560 - 51948504
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||| |||| |||| ||| ||||||| |||||||||||| ||||||| |||||    
T  51948560 gagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaata 51948504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 12188298 - 12188361
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||    
T  12188298 agagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccacta 12188361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 10338174 - 10338226
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaata 10338226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 28841494 - 28841440
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  28841494 gagagaatcgaacttgagaccttgaggaggagcacactccttggtctcaagccaa 28841440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 33549184 - 33549128
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 33549128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21418548 - 21418494
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||| | | ||||||||||||||||| | ||||||||||||||    
T  21418548 gagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaata 21418494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 23910108 - 23910157
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaag 67  Q
    ||||| |||||| |||| ||||||||||||||||||||| ||||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 6385942 - 6385886
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| |||| |||||||||||| ||| |||||||||| |||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaata 6385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 20213122 - 20213070
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagc 68  Q
    |||| ||||||||| |||| | ||||||||||||||||||| |||||||||||    
T  20213122 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22107145 - 22107093
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagc 68  Q
    |||| ||||||||| |||| | ||||||||||||||||||| |||||||||||    
T  22107145 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 34786450 - 34786506
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||||| | | ||| ||||||||||||| || |||||||||||||    
T  34786450 gagagaatcgaacttgagacttcgagaaggagcacactcccagatcccaagccaata 34786506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 20863456 - 20863401
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||| ||  |||| ||||||||||||||||||||| | ||||||||||||    
T  20863456 agagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaa 20863401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 4105133 - 4105075
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||| |||||||| ||||  ||| |||||||||||||||||||||  ||||||||||    
T  4105133 cagagaaaatcgaacctgagatcttaaggaggagcacactcctaggtttcaagccaata 4105075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 6776601 - 6776659
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||||||| | | |||||||||||||| || || |||||||||||||    
T  6776601 cagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaata 6776659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 14278105 - 14278163
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| ||| |||| |||| ||||||||| |||||| |||||| |||||||||    
T  14278105 cagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaata 14278163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 31623001 - 31623043
Alignment:
Q  31 tgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||    
T  31623001 tgagacctcgaggaggagcacactcccaggtcccaagccaata 31623043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34444881 - 34444827
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||| ||||||||||||||  |||||||||| |||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaata 34444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1906570 - 1906517
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| ||||||||||||||| | ||| | |||||||| |||||    
T  1906570 agaatcgaacttgagaccttgaggaggagcataatccaatgtcccaagtcaata 1906517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 15951296 - 15951337
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||| |||| |||| |||||||||||||||||||||    
T  15951296 cagagagaattgaacatgagaccttgaggaggagcacactcc 15951337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 28364019 - 28363954
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    |||||| |||||||  |||| ||||||||||||||||||||  || |||||| |||||| ||||||    
T  28364019 cagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccactat 28363954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 1056679 - 1056743
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||||| |  ||||||||| ||||| ||||| | |||||| ||||||| |||||    
T  1056679 cagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccacta 1056743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 12234503 - 12234559
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||| |||  |||||||||||| |||||||||| |||||    
T  12234503 gagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaata 12234559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14558040 - 14557988
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||  ||||||||||||||| | ||||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaa 14557988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 30883196 - 30883256
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 30883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 14285243 - 14285186
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  14285243 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaat 14285186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 25627139 - 25627075
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||||||||| | || ||||||||||| |||||    
T  25627139 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccacta 25627075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 34984888 - 34984824
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| |||||    
T  34984888 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccacta 34984824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 37258360 - 37258424
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| |||||||| |||| |||||    
T  37258360 cagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccacta 37258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 84902 - 84851
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcca 70  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21549132 - 21549195
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||| ||||||||||||| | || |||||||||||||||| |||||||||||||||| |||||    
T  21549132 agagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccacta 21549195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 16457888 - 16457834
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaata 16457834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 16773889 - 16773831
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||| ||||||||||||||||| |||||||||| |||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaata 16773831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 43442278 - 43442213
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    ||||||||||||||| |||| ||||||||||||||||||||| || || ||| |||||| ||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactat 43442213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 29075863 - 29075799
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| ||||  || ||||||||||||||||| || ||||||||||||| |||||    
T  29075863 cagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccacta 29075799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 16436692 - 16436636
Alignment:
Q  22 aatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||| |||| ||||||||||||||||||||| | |||||||||||||| |||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactcc-aagtcccaagccaataccacta 16436636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 7918463 - 7918527
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| | || |||||||||||||  |||||| |||| ||||||||||| |||||    
T  7918463 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 7918527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 18595995 - 18596059
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| |||||||| | || ||||||||||||||||| ||| ||||| |||||||||| |||||    
T  18595995 cagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccacta 18596059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 25979251 - 25979191
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatca 76  Q
    |||||||||||||| |||| ||||||||||||| ||||||| |  | ||||||||||||||    
T  25979251 agagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaatatca 25979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 15416253 - 15416215
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactc 55  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  15416253 gagagaatcgaacatcagtccttgaggaggagcacactc 15416215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 15485420 - 15485469
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  15485420 gaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaa 15485469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 892479 - 892532
Alignment:
Q  26 gaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| |||| ||||||||||||| ||||||  |||||||||||||||| |||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccacta 892532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 3315293 - 3315244
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagc 68  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||| |||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactccaaggtctcaagc 3315244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17028259 - 17028316
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||| ||||| ||| |||| ||||||||||||||||||||| | ||||||| ||||||    
T  17028259 agagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaata 17028316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 8278271 - 8278327
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||| |||| ||||||||  || ||||||||||||||||| | ||||||||||||||    
T  8278271 gagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaata 8278327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16172982 - 16173033
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||||||| ||||||||||||| ||||| ||||||||    
T  16172982 gagaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaa 16173033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 22737164 - 22737100
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||| ||||||||| |||| | ||| ||||||||||||| | | |||||||||||||| |||||    
T  22737164 cagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccacta 22737100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 30109308 - 30109360
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||| |||| |||  |||||||||||||||| ||||| ||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaata 30109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4566630 - 4566566
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| || |||||||||||||||||| |||| |||||||||||||||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcacta 4566566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 8177176 - 8177240
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||  ||||||||||||||||||||| || ||||||||||||| |||||    
T  8177176 cagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccacta 8177240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 9165189 - 9165253
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||| |||| |||| | ||||||||||||||||||| |||||||||||||||| |||||    
T  9165189 cagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccacta 9165253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 31605846 - 31605898
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  31605846 gagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 33700767 - 33700831
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||||||||| || | ||||||||||| |||||    
T  33700767 cagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccacta 33700831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 36371552 - 36371488
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| |||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccacta 36371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 10526905 - 10526842
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    ||||||||||||||  |||| ||||||||||||||| ||||| |||||||||||||||| ||||    
T  10526905 cagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 15786317 - 15786372
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||| |||| ||||||||||||||||||||| || |||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaata 15786372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 19528325 - 19528379
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaata 19528379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 27476765 - 27476823
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| ||||||||  || ||||||||||||||||||| ||||||||||||||    
T  27476765 cagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaata 27476823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 31049695 - 31049634
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatca 76  Q
    ||||||||||||||  ||||  ||| ||||||||||||||||||| ||||||||||||||||    
T  31049695 cagagagaatcgaagatgagatctttaggaggagcacactcctagatcccaagccaatatca 31049634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 2799944 - 2799880
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||||||||| || || |||||| ||| |||||    
T  2799944 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccacta 2799880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 8904496 - 8904456
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactc 55  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  8904496 cagagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 17745250 - 17745314
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||| |||||||||||||| |  |||||||||||||||| |||||    
T  17745250 cagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccacta 17745314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 31794258 - 31794322
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||| ||||||||||  || ||||||||||||||||||||| | |||||||||||||| |||||    
T  31794258 cagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccacta 31794322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 43446041 - 43445989
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaa 43445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6122875 - 6122812
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| ||||||||| |||| ||||||||||||||||||||| | |||||||||| ||| |||||    
T  6122875 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 6122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 50901662 - 50901607
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    |||||||||||| ||||| ||| ||||||||||||||| | |||||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 3266006 - 3265948
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||||||||||||||||||||| | || ||||| |||||    
T  3266006 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 52029935 - 52029989
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||| |||| |||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactcctaggtctcaagtcaata 52029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 17297062 - 17297013
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagc 68  Q
    ||||||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  17297062 gagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 40257476 - 40257423
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||| ||||||||| ||| ||||||||||||||||| ||||| ||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaata 40257423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4825049 - 4824997
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||| ||| |||| |||||| |||||||||||||| ||||||||||||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaa 4824997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 6650677 - 6650613
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| | ||||||||||||| |||||  | ||||||||||||| |||||    
T  6650677 cagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccacta 6650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12587350 - 12587290
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcac 77  Q
    ||||||||||||| |||| ||| ||||||||||||||||  || ||||||| |||||||||    
T  12587350 gagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcac 12587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 21547474 - 21547538
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||  ||| |||||||||||| |||| | |||||||||||||| |||||    
T  21547474 cagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccacta 21547538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 44046163 - 44046207
Alignment:
Q  36 ccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||    
T  44046163 ccttgaggaggagcacactcccagatcccaagccaataccactat 44046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 51703861 - 51703797
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||  | ||||||||||||||||||| || | ||||||||||| |||||    
T  51703861 cagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccacta 51703797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 52336768 - 52336832
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| |||||||| ||||  ||| |||||||||||||||| || ||||||||||||| |||||    
T  52336768 cagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccacta 52336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 11063637 - 11063574
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||| | || |||||||||||| ||||||   |||||||||||||||| |||||    
T  11063637 agagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccacta 11063574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 12370243 - 12370192
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagc 68  Q
    ||||||||| ||| |||| ||| ||||||||||||||||| |||||||||||    
T  12370243 gagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 21184391 - 21184446
Alignment:
Q  24 tcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| || ||||||||||||  |||||||||||||||| |||||    
T  21184391 tcgaacttgagaccttcagaaggagcacactcgcaggtcccaagccaataccacta 21184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 31383795 - 31383850
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||| |||| ||   |||||||||||||||| ||||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaata 31383850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 1247195 - 1247149
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggt 61  Q
    ||||||||||||||| |||| ||||||||||||| ||||||| ||||    
T  1247195 cagagagaatcgaacctgagaccttgaggaggagtacactcccaggt 1247149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 16169976 - 16170030
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||  |||||||||||| |||||||| |||||||||| |||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaata 16170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 24047100 - 24047154
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||  ||| ||||||||||||||||| | ||| ||||||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaata 24047154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 51814574 - 51814536
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactc 55  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 52116779 - 52116833
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||| |||| |||| | ||||||||||||||||||| | ||||||||||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaata 52116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 12259338 - 12259277
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    |||||||||||||||| | | ||||||||||||||||| |  |||||||  |||||||||||    
T  12259338 gagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactat 12259277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 37400351 - 37400298
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||||||||||||||   ||||| ||||||||||    
T  37400351 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaata 37400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 952589 - 952537
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||| ||| |||| | ||||||| ||||||||||| ||||||||||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaa 952537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6127985 - 6128036
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||||||||| |||||| ||||||||| |||| ||||||||| ||||    
T  6127985 gagaatcgaacttgagaccttga-gaggagcacgctccaaggtcccaaaccaa 6128036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 17410309 - 17410249
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||||  || |||||||| |||||||| || |||||| |||||| |||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccacta 17410249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 21392911 - 21392867
Alignment:
Q  23 atcgaacttgagtccttgaggaggagcacactcctaggtcccaag 67  Q
    ||||||| |||| |||||||||||||||||||| || ||||||||    
T  21392911 atcgaacctgagaccttgaggaggagcacactcttaagtcccaag 21392867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 25494067 - 25494127
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||| |||||| ||| ||| |||||| |||| |||||||| ||||||||||||| |||||    
T  25494067 gagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaataccacta 25494127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36428790 - 36428738
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||| ||| |||| ||||||||||||||| ||||| |||| |||||||||    
T  36428790 gagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaa 36428738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 38947471 - 38947507
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||| |||| |||||||||||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacactcc 38947507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 39714777 - 39714828
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||| |||||||| ||||||| ||||||||||||| || |||||||||||    
T  39714777 gagaatcaaacttgagaccttgag-aggagcacactccaagatcccaagccaa 39714828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 37788460 - 37788522
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| ||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccact 37788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 10445133 - 10445190
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaat 72  Q
    ||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||    
T  10445133 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 28703398 - 28703461
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    ||||||||||||||| |||| |||||| |||||||||||||| || |||||||| |||||||||    
T  28703398 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcact 28703461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 32651433 - 32651496
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||||  ||||  |||||||||||||||||||| |||||||||||||||| |||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccacta 32651496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 14186727 - 14186666
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||| |||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccacta 14186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 30311385 - 30311324
Alignment:
Q  18 agagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||||| |||| ||||||||||||||||||||| || ||||||||| ||| |||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccacta 30311324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 46518710 - 46518645
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcactat 80  Q
    ||||||||||| ||| |||  ||||||||||||||||||||| || ||||||||||||| ||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactat 46518645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4222223 - 4222159
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| | || | ||||||||||||||||||| || ||||||||||||| |||||    
T  4222223 cagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccacta 4222159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 16354886 - 16354950
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| || |||||||||||||||||  |||| ||||||||||| |||||    
T  16354886 cagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccacta 16354950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16900679 - 16900731
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  16900679 gagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaa 16900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 27093355 - 27093419
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| | || ||||||||||| |||||    
T  27093355 cagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccacta 27093419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 47860839 - 47860780
Alignment:
Q  13 agcagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||||    
T  47860839 agcagagagaatcgaact-gagactttgaggaggagcacactcctagatccaaagccaata 47860780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 53413027 - 53412963
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||||||| |||| |||| ||||||||||||||||||||| ||||  |||||||||| |||||    
T  53413027 cagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccacta 53412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||| |||| |||||||||||||||| |||| ||||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 27259243 - 27259185
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| ||| |||  ||| ||||||||||||||||| ||||||||||||||||    
T  27259243 cagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 30510194 - 30510248
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcca 70  Q
    |||||||||||||| |||| ||| ||| ||||||| |||||||||||||||||||    
T  30510194 agagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagcca 30510248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 8796087 - 8796128
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  8796087 cagagagaatcgaacttgagaccttgaggaggagcatactcc 8796128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 36010824 - 36010783
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  36010824 cagagagaatcgaacttgagactttgaggaggagcacactcc 36010783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19716275 - 19716223
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||||  ||| |||||||||||||||||||||  |||||||||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaa 19716223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 21960631 - 21960575
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||  |||| ||| ||||||||||||||||  ||||||||||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaata 21960575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 39253779 - 39253727
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaag 67  Q
    ||||||||||||||| |||| |||||| |||||||||||||| || |||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 40063699 - 40063643
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||||||| |||| |||||||||| ||||  || |||||||||||||    
T  40063699 gagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaata 40063643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 47454615 - 47454675
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||| |||| ||| ||||||||||||||||| || || |||||||||| |||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccacta 47454675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 51903874 - 51903930
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||  ||||||||||||||||| || |||||||||||||    
T  51903874 gagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaata 51903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8075122 - 8075185
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||| ||||||||| |||  ||||||||||||||||||||| | |||||||||| ||| |||||    
T  8075122 agagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccacta 8075185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 17554842 - 17554795
Alignment:
Q  26 gaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||| |||| ||||||||| ||||||||||| ||||||||||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaata 17554795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 14339688 - 14339634
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| | ||||||||||||||||||| |  |||||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaata 14339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 15048055 - 15048109
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcc 69  Q
    |||||| |||||||| |||| ||||||||||||||||| ||| || |||||||||    
T  15048055 cagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcc 15048109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 35623267 - 35623316
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  35623267 gaatcgaacatgagaccttgag-aggagcacactccaaggtcccaagccaa 35623316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 47236969 - 47237023
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| |||||| ||||||||||||||  |||||||| ||||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaata 47237023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 53863862 - 53863923
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcac 77  Q
    |||||||||| |||| | || ||||||| ||||||||||||| |||||||||||||| |||||    
T  53863862 cagagagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaacatcac 53863923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 2667943 - 2667886
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||| |||||||| |||| ||| ||||| ||||||||||| || |||||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaata 2667886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 20501776 - 20501727
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaa 66  Q
    ||||||||||||| |||| |||| |||||||||||||||  |||||||||    
T  20501776 gagagaatcgaacctgagaccttaaggaggagcacactctcaggtcccaa 20501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 26411622 - 26411565
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcac 77  Q
    ||||||||||||||  | ||||| ||||||||||||  |||||||||| |||||||||    
T  26411622 agaatcgaacttgaaacattgagaaggagcacactctcaggtcccaagtcaatatcac 26411565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 36720462 - 36720405
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||| |||  ||| ||||||||||||||||| |  |||||||||||||    
T  36720462 agagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaata 36720405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 44743851 - 44743904
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagcca 70  Q
    |||| |||||||| |||| ||| ||||||||||||||||| || ||||||||||    
T  44743851 gagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3427548 - 3427588
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcc 56  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  3427548 agagagaatcgaatctgagaccttgaggaggagcacactcc 3427588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 4844507 - 4844563
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| | |||| ||| ||||||||||||||||| || ||||||| |||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaata 4844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 4870203 - 4870259
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| | |||| ||| ||||||||||||||||| || ||||||| |||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaata 4870259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 8051290 - 8051238
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||| ||| |||||| |||| ||| | ||||||||||||||||    
T  8051290 gaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaata 8051238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42799746 - 42799797
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||| |||||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  42799746 gagagtcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaa 42799797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 15319 - 15375
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaata 15375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19956 - 20020
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||||||| |||| ||||||||||||||| ||||| |||| ||||||||||| |||||    
T  19956 cagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccacta 20020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 11610 - 11552
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||| ||||||||||||||||| || |||||||||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaata 11552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 13042 - 13098
Alignment:
Q  17 gagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||| |||| ||||||||||||||||||||| || || ||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaata 13098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 94965 - 95029
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| ||| |||| |||| ||||||||||||||||||||| |||| ||||||||||| |||||    
T  94965 cagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccacta 95029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 35383 - 35446
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcact 78  Q
    |||||| |||||||||| || ||||||||||||||| |||||||| | ||||||||||| ||||    
T  35383 cagagataatcgaacttaagaccttgaggaggagcatactcctagattccaagccaataccact 35446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 45753 - 45811
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| |||  ||||||| ||||||||||||||||||| |||||    
T  45753 cagagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaata 45811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 25341 - 25405
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    |||||| |||||||| |||| ||||||| ||||||||||||| | ||| |||||||||| |||||    
T  25341 cagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccacta 25405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 12271 - 12215
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    ||||||||||  ||||| || ||||||||||||||| ||||| ||||||||||||||    
T  12271 cagagagaatttaactttagaccttgaggaggagcaaactccaaggtcccaagccaa 12215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 2705 - 2748
Alignment:
Q  15 cagagagaatcgaacttgagtccttgaggaggagcacactccta 58  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||    
T  2705 cagagagaatcgaacctgagaccttgaggaggagcagactccta 2748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 2468 - 2522
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||| |||| ||||||||||||||||||||| || ||| || ||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaata 2522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 15775 - 15829
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||| |||||||| ||||||||||||||| ||||| |  |||||||||||||    
T  15775 gagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaata 15829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 835 - 892
Alignment:
Q  16 agagagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    |||||||||||||| |||| | | ||||||||||||| ||| || |||||||||||||    
T  835 agagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaata 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 7725 - 7778
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||| ||||||||||||||   ||||| ||||||||||    
T  7725 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaata 7778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 19846 - 19899
Alignment:
Q  20 agaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||||||||| |||  |||||||||| ||||| || |||||||||||||    
T  19846 agaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaata 19899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 145913 - 145965
Alignment:
Q  21 gaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaata 73  Q
    ||||||||  |||| ||| ||| ||||||||||||||||||||||| ||||||    
T  145913 gaatcgaatctgagacctcgagaaggagcacactcctaggtcccaaaccaata 145965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 2907 - 2959
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaa 71  Q
    |||||||||||||||| |||| ||||||| |||||| | ||||||||| ||||    
T  2907 gagaatcgaacttgagaccttaaggaggatcacacttcaaggtcccaaaccaa 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 6921 - 6977
Alignment:
Q  23 atcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||| |||| | |||||||||||||||||||   |||||||||||||| |||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagccaataccacta 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 81562 - 81622
Alignment:
Q  19 gagaatcgaacttgagtccttgaggaggagcacactcctaggtcccaagccaatatcacta 79  Q
    ||||||||||  |||| ||||||||||||||||||| | || | |||| ||||||||||||    
T  81562 gagaatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaatatcacta 81622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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