View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19748_low_68 (Length: 257)
Name: NF19748_low_68
Description: NF19748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19748_low_68 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 44942082 - 44941842
Alignment:
| Q |
1 |
gatggaaatagaggatttggattatgttttggttcctgttggtatattgttgttgttaatttatcatgtttggcttctctacactataatccgacaccct |
100 |
Q |
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| T |
44942082 |
gatggaaatagaggatttggattatgttttggttcctgttggtatattggtgttgttaatttatcatgtttggcttctctacactataatccgacaccct |
44941983 |
T |
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| Q |
101 |
tctagcactgttattggcttgaatgctcagtctcgttaccagtggactcttttcatgatgtctgtcagtannnnnnnnnnnnntgtttttatctgttgac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
44941982 |
tctagcactgttattggcttgaatgctcagtctcgttaccagtggactcttttcatgatgtctgtcagtatctctctctctcttgtttttatctgttgac |
44941883 |
T |
|
| Q |
201 |
acttggcaatccttaacattttgtatttatctttagttatg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
44941882 |
acttggcaatccttaacattttgtatttatctttagttatg |
44941842 |
T |
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