View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1974_low_6 (Length: 424)
Name: NF1974_low_6
Description: NF1974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1974_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 121 - 407
Target Start/End: Complemental strand, 43076177 - 43075891
Alignment:
| Q |
121 |
gtgcttcccgtgagtccctttattcttgtgtgtgaatgtgaaaaatattcttgttgggataacataacactcactttccaagctctttacgaaactatat |
220 |
Q |
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| T |
43076177 |
gtgcttcccgtgagtccctttattcttgtgtgtgaatgtgaaaagtattcttgttgggataacataacactcactttccaagctctttacgaaactatat |
43076078 |
T |
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| Q |
221 |
ttcaccttaaaatttacgtagatctcaccactttataaattgttacgtatactagtgatatctacaaaattacaactggtgagaaaaatgacgttgaaaa |
320 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
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| T |
43076077 |
ttcacagtaaaatttacgtagatctcaccactttataaattgttgtgtatactagtgatatctacaaaattacaaatagtgagaaaaatgacgttgaaaa |
43075978 |
T |
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| Q |
321 |
gatattgttaggatgaatcttgttagcaatgtttagtatgcattattatgcgaagtgctaacttttctggagctgcatgctaatagt |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43075977 |
gatattgttaggatgaatcttgttagcaatgtttagtatgcattattatgcgaagtgctaacttttcgggagctgcatgctaatagt |
43075891 |
T |
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