View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19751_low_6 (Length: 249)

Name: NF19751_low_6
Description: NF19751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19751_low_6
NF19751_low_6
[»] chr1 (28 HSPs)
chr1 (37-132)||(8346399-8346494)
chr1 (37-126)||(48716293-48716382)
chr1 (37-123)||(44548387-44548473)
chr1 (37-126)||(51898694-51898783)
chr1 (34-126)||(9474884-9474976)
chr1 (37-126)||(2581915-2582004)
chr1 (37-126)||(27564746-27564835)
chr1 (37-126)||(38632332-38632421)
chr1 (44-131)||(38595149-38595236)
chr1 (44-126)||(3000319-3000401)
chr1 (56-126)||(49811557-49811627)
chr1 (49-126)||(37649198-37649275)
chr1 (34-126)||(41758805-41758897)
chr1 (37-127)||(43131-43221)
chr1 (37-123)||(26274435-26274521)
chr1 (37-126)||(32813247-32813336)
chr1 (37-126)||(47452331-47452420)
chr1 (37-126)||(50630458-50630547)
chr1 (37-125)||(11152389-11152476)
chr1 (34-126)||(23597099-23597191)
chr1 (44-100)||(13414787-13414843)
chr1 (34-126)||(45044568-45044660)
chr1 (34-85)||(44334178-44334229)
chr1 (58-119)||(26440741-26440802)
chr1 (58-126)||(37926470-37926538)
chr1 (37-131)||(5959011-5959105)
chr1 (61-126)||(41608528-41608593)
chr1 (61-126)||(50591035-50591100)
[»] chr6 (19 HSPs)
chr6 (36-126)||(15832577-15832667)
chr6 (37-138)||(17598542-17598643)
chr6 (37-126)||(32869678-32869767)
chr6 (37-123)||(22880669-22880755)
chr6 (39-126)||(6209478-6209565)
chr6 (44-126)||(31109418-31109500)
chr6 (47-127)||(29857826-29857906)
chr6 (37-126)||(11427616-11427707)
chr6 (47-123)||(23128148-23128224)
chr6 (37-126)||(31110772-31110859)
chr6 (37-126)||(31976248-31976337)
chr6 (50-125)||(946377-946452)
chr6 (58-121)||(9379744-9379807)
chr6 (61-126)||(31953065-31953130)
chr6 (59-122)||(28536519-28536582)
chr6 (37-126)||(4231548-4231637)
chr6 (61-126)||(15508059-15508124)
chr6 (61-126)||(15990077-15990142)
chr6 (61-126)||(30341395-30341460)
[»] chr8 (26 HSPs)
chr8 (37-129)||(12831044-12831136)
chr8 (37-126)||(37038479-37038568)
chr8 (37-131)||(504132-504226)
chr8 (37-126)||(14547922-14548011)
chr8 (37-126)||(10284642-10284731)
chr8 (37-126)||(15197333-15197422)
chr8 (37-126)||(34012307-34012396)
chr8 (37-126)||(40423954-40424043)
chr8 (37-125)||(5957831-5957919)
chr8 (44-126)||(23122615-23122697)
chr8 (37-126)||(15048193-15048281)
chr8 (47-126)||(1179961-1180040)
chr8 (44-126)||(44507105-44507187)
chr8 (44-126)||(14055610-14055692)
chr8 (56-121)||(10621117-10621182)
chr8 (58-126)||(20074966-20075034)
chr8 (37-104)||(8841443-8841510)
chr8 (61-132)||(30479509-30479580)
chr8 (37-131)||(43414592-43414686)
chr8 (37-126)||(4854874-4854963)
chr8 (44-126)||(17443825-17443907)
chr8 (44-126)||(42221515-42221597)
chr8 (61-132)||(16056436-16056507)
chr8 (61-132)||(16383371-16383442)
chr8 (37-83)||(15258940-15258986)
chr8 (61-126)||(34307216-34307281)
[»] chr4 (29 HSPs)
chr4 (37-132)||(50052439-50052534)
chr4 (37-126)||(41236347-41236436)
chr4 (37-126)||(54473544-54473633)
chr4 (44-132)||(480465-480553)
chr4 (44-126)||(29239886-29239968)
chr4 (47-126)||(50526192-50526271)
chr4 (37-126)||(11511473-11511562)
chr4 (37-126)||(48183060-48183149)
chr4 (44-126)||(3481654-3481736)
chr4 (37-135)||(42044378-42044476)
chr4 (37-126)||(6034044-6034133)
chr4 (49-126)||(23608235-23608312)
chr4 (37-126)||(24995118-24995207)
chr4 (37-126)||(31910192-31910281)
chr4 (37-126)||(29234256-29234345)
chr4 (59-126)||(40574779-40574846)
chr4 (40-126)||(55475191-55475277)
chr4 (58-126)||(47104544-47104612)
chr4 (34-118)||(28480276-28480360)
chr4 (34-118)||(28481151-28481235)
chr4 (34-118)||(28482026-28482110)
chr4 (44-126)||(29977885-29977967)
chr4 (61-126)||(29547994-29548059)
chr4 (37-78)||(41823930-41823971)
chr4 (61-126)||(44536781-44536845)
chr4 (61-126)||(47986208-47986273)
chr4 (37-126)||(48647737-48647826)
chr4 (32-121)||(53352572-53352660)
chr4 (34-94)||(56300173-56300233)
[»] chr2 (28 HSPs)
chr2 (37-126)||(10249393-10249482)
chr2 (37-126)||(32505659-32505748)
chr2 (37-126)||(13438343-13438432)
chr2 (34-123)||(19930828-19930917)
chr2 (47-126)||(4060685-4060764)
chr2 (37-123)||(28863458-28863544)
chr2 (37-126)||(9058480-9058569)
chr2 (37-126)||(33436111-33436200)
chr2 (37-126)||(40701478-40701567)
chr2 (37-128)||(17473018-17473109)
chr2 (44-126)||(7465753-7465835)
chr2 (44-126)||(27864704-27864786)
chr2 (44-126)||(38882832-38882913)
chr2 (44-126)||(20700815-20700897)
chr2 (44-126)||(30915463-30915545)
chr2 (37-126)||(5574499-5574588)
chr2 (37-126)||(28381666-28381755)
chr2 (37-126)||(40613913-40614002)
chr2 (37-126)||(42257193-42257282)
chr2 (44-125)||(41575138-41575219)
chr2 (32-126)||(36168836-36168930)
chr2 (34-126)||(17820012-17820104)
chr2 (58-126)||(33436211-33436279)
chr2 (39-126)||(38273155-38273242)
chr2 (37-126)||(2533124-2533212)
chr2 (45-126)||(26891523-26891604)
chr2 (61-126)||(43490121-43490186)
chr2 (37-128)||(38732352-38732443)
[»] chr7 (33 HSPs)
chr7 (47-126)||(19436208-19436287)
chr7 (37-126)||(19329842-19329931)
chr7 (37-126)||(38267040-38267129)
chr7 (34-132)||(35137527-35137625)
chr7 (37-126)||(3434562-3434651)
chr7 (34-127)||(4999522-4999615)
chr7 (37-126)||(7389389-7389478)
chr7 (44-126)||(36361931-36362013)
chr7 (37-126)||(8080394-8080483)
chr7 (37-126)||(21234401-21234490)
chr7 (37-123)||(3783998-3784084)
chr7 (44-126)||(36362026-36362108)
chr7 (37-126)||(38837217-38837306)
chr7 (37-125)||(32951504-32951592)
chr7 (37-132)||(3694361-3694456)
chr7 (47-126)||(40957707-40957786)
chr7 (36-130)||(40846123-40846217)
chr7 (37-126)||(46374813-46374902)
chr7 (37-139)||(8238199-8238302)
chr7 (34-133)||(35468863-35468962)
chr7 (58-121)||(35522881-35522944)
chr7 (210-249)||(43100200-43100239)
chr7 (37-126)||(26296644-26296733)
chr7 (37-126)||(38044197-38044286)
chr7 (37-126)||(36208173-36208262)
chr7 (58-126)||(39255955-39256023)
chr7 (60-126)||(10343597-10343663)
chr7 (47-85)||(16374845-16374883)
chr7 (52-126)||(46033827-46033901)
chr7 (61-126)||(22343361-22343426)
chr7 (61-126)||(32564461-32564526)
chr7 (58-126)||(18207180-18207248)
chr7 (70-126)||(31735884-31735940)
[»] chr5 (24 HSPs)
chr5 (37-126)||(2740274-2740363)
chr5 (37-126)||(40145407-40145496)
chr5 (34-126)||(6679698-6679790)
chr5 (37-132)||(18520895-18520990)
chr5 (37-126)||(13811652-13811741)
chr5 (37-126)||(33149649-33149738)
chr5 (34-126)||(28177775-28177867)
chr5 (37-126)||(35785199-35785288)
chr5 (37-126)||(36732953-36733042)
chr5 (37-126)||(42414313-42414402)
chr5 (37-131)||(14831809-14831903)
chr5 (37-126)||(15409621-15409710)
chr5 (47-128)||(35943913-35943994)
chr5 (37-126)||(31008988-31009077)
chr5 (37-126)||(41470427-41470516)
chr5 (67-125)||(36875644-36875702)
chr5 (37-126)||(20073527-20073616)
chr5 (61-126)||(2252203-2252268)
chr5 (37-126)||(26720516-26720605)
chr5 (37-126)||(26990265-26990354)
chr5 (32-80)||(31132390-31132438)
chr5 (58-128)||(33825356-33825426)
chr5 (61-126)||(3921300-3921365)
chr5 (45-126)||(6260020-6260101)
[»] chr3 (28 HSPs)
chr3 (37-126)||(53982011-53982100)
chr3 (47-126)||(33118872-33118951)
chr3 (44-126)||(17470405-17470487)
chr3 (37-126)||(27714902-27714991)
chr3 (37-126)||(33644200-33644289)
chr3 (37-126)||(54868906-54868995)
chr3 (47-126)||(36707445-36707524)
chr3 (47-126)||(49607414-49607493)
chr3 (40-126)||(11347936-11348022)
chr3 (44-121)||(52629305-52629382)
chr3 (34-126)||(9562999-9563091)
chr3 (50-126)||(11095377-11095453)
chr3 (37-126)||(8076393-8076482)
chr3 (45-126)||(35536626-35536707)
chr3 (34-126)||(24699962-24700054)
chr3 (37-125)||(31456690-31456778)
chr3 (44-126)||(26141550-26141632)
chr3 (37-126)||(41189775-41189864)
chr3 (61-119)||(35093592-35093650)
chr3 (37-122)||(48587102-48587187)
chr3 (37-121)||(26754700-26754784)
chr3 (61-128)||(14623874-14623941)
chr3 (44-122)||(30801751-30801829)
chr3 (45-126)||(8956762-8956843)
chr3 (37-126)||(51419371-51419460)
chr3 (58-126)||(47531865-47531933)
chr3 (58-126)||(35965806-35965874)
chr3 (44-126)||(20764933-20765015)
[»] scaffold1268 (1 HSPs)
scaffold1268 (49-126)||(952-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (49-126)||(952-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (45-136)||(10128-10218)
[»] scaffold0110 (1 HSPs)
scaffold0110 (44-126)||(8881-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (47-127)||(4028-4108)


Alignment Details
Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 8346399 - 8346494
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||| |||||    
T  8346399 ttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactctttttt 8346494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 48716293 - 48716382
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||    
T  48716293 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 44548387 - 44548473
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    |||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  44548387 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 51898694 - 51898783
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  51898694 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 9474884 - 9474976
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  9474884 tgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 2582004 - 2581915
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  2582004 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 27564746 - 27564835
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  27564746 ttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 38632332 - 38632421
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||| | |||||||||||||||||||    
T  38632332 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 38595236 - 38595149
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 131  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||| ||| ||||||||||||||| ||||    
T  38595236 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactcttttt 38595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 3000401 - 3000319
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||| |||||||||||||||    
T  3000401 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 49811557 - 49811627
Alignment:
Q  56 ctacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 37649275 - 37649198
Alignment:
Q  49 cacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| |||||||| |||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||    
T  37649275 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 41758897 - 41758805
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||  ||| | |||||||||||||||||||    
T  41758897 tgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 43221 - 43131
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcc 127  Q
    |||||| | |||||||||||||||||||| |||||||||||| ||||||| | ||||||||| |||||   ||||||||||||||||||||    
T  43221 ttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactcc 43131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 26274521 - 26274435
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    ||||||||| |||||||||||| |||||| |||||| ||||||||||||||| ||||||| ||| ||| | ||||||||||||||||    
T  26274521 ttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 32813336 - 32813247
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||| ||||||| |||||||||||||||| ||||    
T  32813336 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 47452331 - 47452420
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||| | |||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||||||    
T  47452331 ttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 50630547 - 50630458
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| |  |||| | ||||||| ||||||| | | |||||||||||||||||    
T  50630547 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 11152389 - 11152476
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    |||||| ||||| || ||||||||||||| ||||||||||||||||| || ||||||||| ||||| ||| ||||||||| ||||||||    
T  11152389 ttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacct-aaggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 23597099 - 23597191
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||| |||| ||||| | |||||||| |||||| ||||| | |||||  |||||||| ||||||| |||||||||||||||||||||    
T  23597099 tgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 13414843 - 13414787
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcac 100  Q
    |||||||||||||||||||| | |||||||||||| ||||||| |||||||||||||    
T  13414843 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 45044568 - 45044660
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||| ||||||| ||| |||| ||||| |||||||| ||| ||||||||||||||||| ||||||| ||  | |||||||||| ||||    
T  45044568 tgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 44334178 - 44334229
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaa 85  Q
    ||||||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  44334178 tgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaa 44334229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 26440802 - 26440741
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatc 119  Q
    |||||||| |||||||||||| ||| ||| |||||||||||| |||| ||||||||| ||||    
T  26440802 acgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 37926470 - 37926538
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| |||||| ||||| ||| ||| | ||||||| ||||||||||| |||||||||||| ||||    
T  37926470 acgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 5959011 - 5959105
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 131  Q
    |||||| |||||||  |||| || ||||| |||||||||||| ||||||  ||||||||| ||| ||| | ||| |||||||||| |||| ||||    
T  5959011 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactcttttt 5959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 41608528 - 41608593
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||  ||||||  ||||||||| ||||||| ||||| |||||||||| ||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 50591035 - 50591100
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  50591035 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 15832667 - 15832577
Alignment:
Q  36 tttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||    
T  15832667 tttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 138
Target Start/End: Complemental strand, 17598643 - 17598542
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttttaaaa 136  Q
    |||||| ||||||||||||| |||||||| |||||||||||| ||||||| | ||||||| ||||||| | ||||||||||||||||||| |||| ||||    
T  17598643 ttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcattttcaaaa 17598544  T
Q  137 ta 138  Q
    ||    
T  17598543 ta 17598542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 32869767 - 32869678
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||| ||||||    
T  32869767 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 22880669 - 22880755
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    |||||| |||||||||||||||||||||| | |||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||    
T  22880669 ttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 6209478 - 6209565
Alignment:
Q  39 gtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||| ||||||||||||||||||| || |||||||||||  |||||||| |||||||| ||||||| | |||||||||||||||||||    
T  6209478 gtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 31109418 - 31109500
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||  ||||||||||    
T  31109418 gggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 29857906 - 29857826
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcc 127  Q
    ||||||| ||||||||||| |||||||||||| ||| ||| ||||||||| || |||||| ||||||||||||||||||||    
T  29857906 tccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactcc 29857826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 11427707 - 11427616
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcaccta--aagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||  | | |||||||||||||||||||    
T  11427707 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 23128148 - 23128224
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    ||||||||||||||||||| |||||||||||| ||||||| | |||||| |||| ||||| ||||||| ||||||||    
T  23128148 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 31110772 - 31110859
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||| |||  ||||||||| ||||||||| |  ||||||| ||||||||| ||||||| |||||||||||||||| ||||    
T  31110772 ttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 31976337 - 31976248
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||| || ||||| |||||||| |||||||||||| ||| ||| ||| ||||| ||||||| |||||||||||||||| ||||    
T  31976337 ttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 946452 - 946377
Alignment:
Q  50 acgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    ||||||||| |||||| ||||||| || | ||||||| |||||||| |||||||| |||||||||||||| |||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 9379744 - 9379807
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 121  Q
    ||||||||||||||||| ||| ||||||  | |||||||||| |||| ||||||||||||||||    
T  9379744 acgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 31953065 - 31953130
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||| ||||| ||||||  ||||||||| ||||||| ||||||||| |||||||||||    
T  31953065 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 28536519 - 28536582
Alignment:
Q  59 cgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 122  Q
    ||||||| |||||||||||| ||||||  | ||||||| ||||||| ||||| |||||||||||    
T  28536519 cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 4231637 - 4231548
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||  || | |||||||| |||||||||||| || |||  ||||||||| ||||||| ||||| |||| ||||| ||||    
T  4231637 ttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 15508059 - 15508124
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  15508059 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 15990077 - 15990142
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  15990077 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 30341395 - 30341460
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  30341395 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 12831136 - 12831044
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctt 129  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  12831136 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactcctt 12831044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 37038568 - 37038479
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  37038568 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 504132 - 504226
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 131  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||| ||||    
T  504132 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcatttt 504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 14548011 - 14547922
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| | |||||||||||| ||||||    
T  14548011 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 10284642 - 10284731
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||| | |||||||||||||| ||||    
T  10284642 ttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 15197422 - 15197333
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||   |||||||||||||||||||    
T  15197422 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 34012307 - 34012396
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||||||    
T  34012307 ttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 40423954 - 40424043
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | | |||||||||||||||||    
T  40423954 ttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 5957919 - 5957831
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||  |||||||||||||||||||    
T  5957919 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 23122615 - 23122697
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||| ||| | |||||||||||||||||||    
T  23122615 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 15048193 - 15048281
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||| ||||    
T  15048193 ttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 1179961 - 1180040
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||||||    
T  1179961 tccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 44507105 - 44507187
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||| |||  |||||||  ||||||| | |||||||||||||||||||    
T  44507105 gggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 14055610 - 14055692
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||| ||| | |||||||||||||||||||   |||||||||||||||| | |||| ||||||||| ||||    
T  14055610 gggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 10621117 - 10621182
Alignment:
Q  56 ctacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 121  Q
    |||||||||| |||||||||||| ||||||| ||||||||  ||||||| ||||||||||||||||    
T  10621117 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| |||||| ||||| |||||||  |||||||| ||||||| |||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 8841443 - 8841510
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaa 104  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||||    
T  8841443 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaa 8841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 30479509 - 30479580
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    ||||| |||||| ||||||||||||| ||||||||| ||||||| | ||| |||||||||| ||||||||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactccttttt 30479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 43414592 - 43414686
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 131  Q
    |||||| || |||| ||||| |||||| | |||||||||||| ||||||| ||||| ||| || |||| |||||||||||||||| |||| ||||    
T  43414592 ttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcatttt 43414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 4854874 - 4854963
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||| ||| | || | ||| |||||| ||| | ||| ||| ||||||||| ||||||| |||||||||||||||||||||    
T  4854874 ttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 17443907 - 17443825
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||||| ||||    
T  17443907 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 42221597 - 42221515
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||  ||| ||||||||| |||||||||||| |||| |    ||||||||||||||| ||||| |||||||||||||||    
T  42221597 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 16056436 - 16056507
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    ||||| |||||||||||| ||||||  | ||||||||||| ||| ||||| |||||||||| |||| |||||    
T  16056436 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactctttttt 16056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 16383442 - 16383371
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| |||| |||||    
T  16383442 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctttttt 16383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 15258940 - 15258986
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 83  Q
    |||||||||||||||||||| || ||||| |||||| ||||||||||    
T  15258940 ttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtc 15258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 34307281 - 34307216
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 50052439 - 50052534
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||    
T  50052439 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctttttt 50052534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 41236436 - 41236347
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  41236436 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 54473544 - 54473633
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  54473544 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 480465 - 480553
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||| |||||    
T  480465 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactctttttt 480553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 29239968 - 29239886
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||    
T  29239968 gggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 50526192 - 50526271
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||| |||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  50526192 tccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 11511473 - 11511562
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  11511473 ttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 48183060 - 48183149
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||| ||| | |||||||||||||||||||    
T  48183060 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 3481736 - 3481654
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||| |||||| |||||||||||| |||||||  |||||||| ||||||||| |||||||||||||||||||    
T  3481736 gggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 42044378 - 42044476
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttttaaa 135  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||  || | ||||||| ||||||| | ||||||||||||||||||| ||||||||    
T  42044378 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactcttttttaaa 42044476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 6034133 - 6034044
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||| ||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  6034133 ttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 23608312 - 23608235
Alignment:
Q  49 cacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| | ||||||| |||||||||||    
T  23608312 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 24995118 - 24995207
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| || |||| | |||| || |||||||||||    
T  24995118 ttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 31910281 - 31910192
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| ||| |||||| |||||||||||| |||||||  |||||||||||||||| |||||||||||||||| ||||    
T  31910281 ttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 29234256 - 29234345
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||  | | ||||| ||||||||| || |||| | |||||||||||||||||||    
T  29234256 ttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 40574846 - 40574779
Alignment:
Q  59 cgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| |||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 55475277 - 55475191
Alignment:
Q  40 tgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||  || | || ||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||||||||| ||||    
T  55475277 tgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 47104612 - 47104544
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||||||||| ||||| |  ||||||||||| ||||  |||||||| |||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 28480276 - 28480360
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtat 118  Q
    ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||    
T  28480276 tgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 28481151 - 28481235
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtat 118  Q
    ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||    
T  28481151 tgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 28482026 - 28482110
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtat 118  Q
    ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||    
T  28482026 tgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 29977967 - 29977885
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||  ||||||||||||| |||||||||||| ||| ||  ||||||||| ||||||  | | | |||||||||||||||    
T  29977967 gggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  | ||||||| ||||||| ||||| |||||||||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 41823971 - 41823930
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtgg 78  Q
    |||||| ||||||| |||||||||||||| ||||||||||||    
T  41823971 ttgtgcggggtccatgtgactacgtgtcagatttttgtgtgg 41823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 44536781 - 44536845
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||||  ||| |||||||||| ||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 47986273 - 47986208
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||||||||||  | ||||||| ||||||| | ||| |||||||||| ||||    
T  47986273 tgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 48647737 - 48647826
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| | ||||||||||| |||||| | |||||| ||||| ||| ||  |||||||||| |||||| ||||| ||||| |||| ||||    
T  48647737 ttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 53352572 - 53352660
Alignment:
Q  32 tatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 121  Q
    |||| |||||| |||||||| | ||||||||||| |||||||||| | ||| |||   ||||||| ||||||| | ||||||||||||||    
T  53352572 tatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 56300173 - 56300233
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtat 94  Q
    |||||||||||| | ||  |||| || ||||| |||||||||||||||||||||| |||||    
T  56300173 tgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaatgatgtat 56300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 10249393 - 10249482
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||    
T  10249393 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 32505659 - 32505748
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||    
T  32505659 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 13438432 - 13438343
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| | ||||||||||||||| | |||||||||||||||||||    
T  13438432 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 19930828 - 19930917
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||    
T  19930828 tgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 4060764 - 4060685
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  4060764 tccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 28863544 - 28863458
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||    
T  28863544 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 9058569 - 9058480
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  9058569 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 33436111 - 33436200
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  33436111 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 40701567 - 40701478
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  40701567 ttgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 17473109 - 17473018
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 128  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||| | |||||||||||||||||||||    
T  17473109 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactcct 17473018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 7465753 - 7465835
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||| | |||||||||||||||||||    
T  7465753 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 27864786 - 27864704
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||| ||| | |||||||||||||||||||    
T  27864786 gggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 38882832 - 38882913
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||    
T  38882832 gggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 20700897 - 20700815
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||| |  |||||| ||||||||| ||| ||| |||||||||||||||||||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

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Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 30915545 - 30915463
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||| |||||  |||||| ||||||||| ||||||| | |||||||||||||||||||    
T  30915545 gggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 5574499 - 5574588
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||   |||||||||||||||||||    
T  5574499 ttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 28381666 - 28381755
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| | ||||| |||||||||||||| |||||||||||| |||| || ||||||||| ||||||| | |||||||||||||||||||    
T  28381666 ttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

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Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 40613913 - 40614002
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| | |||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||| ||||    
T  40613913 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 42257282 - 42257193
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| | |||||||| |||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  42257282 ttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 41575219 - 41575138
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    |||||||| |||| || ||||||||||||||||| |||||||| ||||||||  || |||| ||||||||||||||||||||    
T  41575219 gggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 36168930 - 36168836
Alignment:
Q  32 tatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||| |||||| ||||||| ||| | |||||||||||||||||||||  || ||| | |||||||||| |||| |||||||||||||||| ||||    
T  36168930 tatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 17820012 - 17820104
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||  |||||||||| || || ||||| |||||||||||| ||||||  ||||||||| |||||| || |||||||||||||| ||||    
T  17820012 tgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 33436279 - 33436211
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| |||||| ||||| ||||||| ||||||||| || |||| |||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 38273155 - 38273242
Alignment:
Q  39 gtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||| ||||||| ||| |||||||||| |||||||||||| ||| ||| ||||||||| || ||||  ||||||||||||||| ||||    
T  38273155 gtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 2533212 - 2533124
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||| | ||| |||||||||| |||||||||||| ||||||| | ||||||| ||| ||| |||||||||||||||| ||||    
T  2533212 ttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 26891523 - 26891604
Alignment:
Q  45 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||| || ||||| |||||||||||| |||| |  ||||||||| ||||||| | || ||||||||||| ||||    
T  26891523 ggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 43490186 - 43490121
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||||||||||| | ||| |||||||||| ||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 38732443 - 38732352
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 128  Q
    |||||| |||||||  |||| || ||||| |||||||||||| ||||||  | ||||||||||| ||| | ||| |||||||||| ||||||    
T  38732443 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactcct 38732352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 19436208 - 19436287
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19436208 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 19329931 - 19329842
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  19329931 ttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 38267129 - 38267040
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| ||| | |||||||||||||||||||    
T  38267129 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 35137625 - 35137527
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    ||||||||| |||||||||||||||||||| | |||||||||||| ||||||| ||||||||| ||||||| | ||||||| ||||||||||| |||||    
T  35137625 tgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactcattttt 35137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 3434651 - 3434562
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || |||||||||||||||||||  ||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  3434651 ttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 4999522 - 4999615
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcc 127  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||| ||||||| ||||||||| || |||| | ||||||||||||||||||||    
T  4999522 tgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcc 4999615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 7389478 - 7389389
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||| ||||||| | |||||||||||||||||||    
T  7389478 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 36361931 - 36362013
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||| | |||||||||||||||||||    
T  36361931 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 8080394 - 8080483
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||| ||| | ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  8080394 ttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 21234490 - 21234401
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||| || ||| ||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  21234490 ttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 3784084 - 3783998
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 123  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||| | ||||||||||||||||    
T  3784084 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 36362108 - 36362026
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  36362108 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 38837306 - 38837217
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||| | |||  || ||||||||| ||||||| | |||||||||||||||||||    
T  38837306 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 32951504 - 32951592
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    |||||| |||||||||||||||||||| | |||||||||||||||| ||| | |||||||||| ||||   ||||||||||||||||||    
T  32951504 ttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 3694456 - 3694361
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    |||||| || ||||| ||||||||||||| |||||||||||| ||| ||| ||||||||||||||||| | ||| ||| |||||||| || |||||    
T  3694456 ttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcattattcattttt 3694361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 40957786 - 40957707
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||||||| |||||||||||| | |||||  |||||||| |||||||   |||||||||||||||||||    
T  40957786 tccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 40846123 - 40846217
Alignment:
Q  36 tttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttt 130  Q
    ||||||| |||||||  | ||||| ||| | |||||||||||||||||||  ||||||||| ||||||| ||||| |||||||||| ||||||||    
T  40846123 tttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactccttt 40846217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 46374813 - 46374902
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| | |||||||| |||||||||||| ||| ||| ||||| ||| ||||||| |||||||||||||||| ||||    
T  46374813 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 8238302 - 8238199
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcaccta-aagatgtctatgtatcattactcctttttaaa 135  Q
    |||||| |||||||  ||||||| ||||| |||||||||||| ||||||| ||||||||| |||||| | | ||| |||||||||| |||| |||| |||    
T  8238302 ttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcattttaaaa 8238203  T
Q  136 atag 139  Q
    ||||    
T  8238202 atag 8238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 35468863 - 35468962
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttta 133  Q
    |||||||||||||||||| ||   || | | | |||||| ||||| ||||||||| ||||||| || |||| ||||||||||||||||||||| ||||||    
T  35468863 tgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactctttttta 35468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 35522944 - 35522881
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 121  Q
    |||||||| |||||||||||| ||| ||||||||||||| ||| ||| ||||||||||||||||    
T  35522944 acgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 43100239 - 43100200
Alignment:
Q  210 gattaaggtgtatatacggtaatacgcgttcaaaactttc 249  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43100239 gattaaggtgtatatacggtaatacgcgttcaaaactttc 43100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 26296733 - 26296644
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||  || | |||| ||| |||||| ||||||||| ||| ||| ||||||||||||| |||||||||||||||| ||||    
T  26296733 ttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 38044286 - 38044197
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||  || |||| ||||| |||||||||||||||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  38044286 ttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 36208262 - 36208173
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||| || |||||  ||||||||||| ||||||    ||||||  ||||||| | |||||||||||||| ||||    
T  36208262 ttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 39255955 - 39256023
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| |||||||| ||| | |||| |||||||||| ||||||| | |||||||||||||| ||||    
T  39255955 acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  60 gtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||| ||||||   |||||||  ||||||| | |||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 16374845 - 16374883
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaa 85  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  16374845 tccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 46033827 - 46033901
Alignment:
Q  52 gtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||| |||||| ||||| ||| ||| ||||||||| |||||||  || |||||||||||| ||||    
T  46033827 gtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 22343426 - 22343361
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| |||||||  |||| |||||||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 18207248 - 18207180
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| | |||||||| ||| ||||||  ||||||||| ||||||| | |||||||||||||| ||||    
T  18207248 acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  70 tttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||| ||| |||  |||||||| ||||||| |||||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 2740363 - 2740274
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  2740363 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 40145496 - 40145407
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||| | |||||||||||||||||||    
T  40145496 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 6679790 - 6679698
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  6679790 tgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 18520895 - 18520990
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 132  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||| || |||||    
T  18520895 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctttttt 18520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 13811741 - 13811652
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||| | |||||||||||| ||||||    
T  13811741 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 33149649 - 33149738
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||||||    
T  33149649 ttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 28177867 - 28177775
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||| ||||    
T  28177867 tgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 35785288 - 35785199
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  35785288 ttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 36732953 - 36733042
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||||||||||| |||||| |||||||||||| ||||||| |||||||||  |||||| | |||||||||||||||||||    
T  36732953 ttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 42414313 - 42414402
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||||  | |||||||||||||||||||    
T  42414313 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 14831903 - 14831809
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 131  Q
    |||||| || ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||   ||||||||||||||||||| ||||    
T  14831903 ttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcatttt 14831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 15409621 - 15409710
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| |||||||||| |||||||||||| |||||||   ||||||||||||||| |||||||||||||||| ||||    
T  15409621 ttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 35943913 - 35943994
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 128  Q
    ||||||| ||||||||||| |||||||||||| ||||||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  35943913 tccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactcct 35943994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 31009077 - 31008988
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || ||||||||||||||||||| |||||||||||| |||  ||   ||||||||||||||| ||||| |||||||||| ||||    
T  31009077 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 41470427 - 41470516
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||| | || || | ||| | ||||||| ||||||||| ||||||||||| |||||||    
T  41470427 ttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  67 atttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 20073527 - 20073616
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||||||   |||||  | |||||| ||||  ||||||| |||||||||||| |||| ||||||||| |||||||||||    
T  20073527 ttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 2252203 - 2252268
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| ||||| |||||||||| ||||    
T  2252203 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 26720605 - 26720516
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || |||| ||| | |||||||| |||||| ||| | ||| ||| ||||||||| ||||||| |||||||||||||||| ||||    
T  26720605 ttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 26990354 - 26990265
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| || |||| ||| | |||||||| |||||| ||| | ||| ||| ||||||||| ||||||| |||||||||||||||| ||||    
T  26990354 ttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 31132438 - 31132390
Alignment:
Q  32 tatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggat 80  Q
    |||| |||||| |||||||||||||||| ||||| ||||||||||||||    
T  31132438 tatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtggat 31132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 33825356 - 33825426
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 128  Q
    |||||||| |||||| ||||| ||||||   |||||||| |||||||  ||||||||| ||||||||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactcct 33825426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 3921300 - 3921365
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  3921300 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 6260020 - 6260101
Alignment:
Q  45 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||| | |||| | ||||||| |||| ||| ||| ||||||||||||||||  | ||| |||||||||||||||    
T  6260020 ggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 53982100 - 53982011
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  53982100 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 33118872 - 33118951
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 17470487 - 17470405
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| ||||||||| |||||||||||||||||||    
T  17470487 gggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 27714902 - 27714991
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||||||||| |||||||||||||||||||    
T  27714902 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 33644289 - 33644200
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||| || | |||||||||||||||||||    
T  33644289 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 54868906 - 54868995
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  54868906 ttgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 36707445 - 36707524
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||    
T  36707445 tccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 49607493 - 49607414
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  49607493 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 11347936 - 11348022
Alignment:
Q  40 tgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||| ||| | |||||||| |||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||    
T  11347936 tgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 52629382 - 52629305
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 121  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||    
T  52629382 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 9563091 - 9562999
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | |||||||||| |||| | ||| |||||||||||||||    
T  9563091 tgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 11095377 - 11095453
Alignment:
Q  50 acgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 8076482 - 8076393
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| || ||||||| | ||| |||||||||||||||    
T  8076482 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 35536707 - 35536626
Alignment:
Q  45 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| |||| |||||||| |||||| ||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  35536707 ggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 24699962 - 24700054
Alignment:
Q  34 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| ||||||||||||| | ||||| || |||||| ||||| ||||||| ||||||||| || |||| |||||||||||||||||||||    
T  24699962 tgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 31456778 - 31456690
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 125  Q
    |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| | ||||  | ||||||||||||||||||    
T  31456778 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 26141550 - 26141632
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||| ||||||| |||||||||||||||| ||||    
T  26141550 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 41189775 - 41189864
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||||| ||| | ||||||||||||||| ||||| ||||||||| ||||||| ||||||| ||||| |||||||||| ||||    
T  41189775 ttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 35093650 - 35093592
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatc 119  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  35093650 tgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 48587102 - 48587187
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 122  Q
    |||||| || ||||||||||||||||||| |||||| ||| | ||||||| ||||||||| ||||||| | | |||||||||||||    
T  48587102 ttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 26754784 - 26754700
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 121  Q
    |||||| ||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| ||||||| | |||||||| |||||    
T  26754784 ttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 14623874 - 14623941
Alignment:
Q  61 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 128  Q
    ||||| |||||| ||||| ||||||  ||||||||| ||||||| |||||||||||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactcct 14623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 30801751 - 30801829
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 122  Q
    |||||||  ||||||| ||||| |||||||||||| | ||||| |||||||| |||||||| | |||||||||||||||    
T  30801751 gggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 8956843 - 8956762
Alignment:
Q  45 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| |||  |||||||| |||||| ||||| ||||||| | ||||||| ||| ||| |||||||||||||||||||||    
T  8956843 ggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 51419371 - 51419460
Alignment:
Q  37 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||| ||||| | ||| | |||||||| |||||||||||| ||| ||| | |||||||||| |||| |||||||||||||||| ||||    
T  51419371 ttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 47531933 - 47531865
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| ||| |||||||||||| ||| ||||||||| || |||| |||||||||||||||| ||||    
T  47531933 acgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 35965806 - 35965874
Alignment:
Q  58 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||| |||||| ||||| ||||||| | |||||| |||| ||| ||||| |||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 20764933 - 20765015
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||| ||| | |||||||| |||||||||||| ||| |||  |||||||  ||||||| ||||||||||| |||| ||||    
T  20764933 gggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 952 - 1029
Alignment:
Q  49 cacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  952 cacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

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Target: scaffold1267 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 952 - 1029
Alignment:
Q  49 cacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    |||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  952 cacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

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Target: scaffold0321 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 10128 - 10218
Alignment:
Q  45 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttttaaaa 136  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||| ||| ||||||||||    
T  10128 ggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataact-ctttttaaaa 10218  T

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Target: scaffold0110 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 8881 - 8963
Alignment:
Q  44 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 126  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| |||||| ||||    
T  8881 gggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactc 8963  T

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Target: scaffold0237 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 4108 - 4028
Alignment:
Q  47 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcc 127  Q
    ||||||| ||||||||||| |||||||||||| ||| ||| ||||||||| || |||||| ||||||||||||||||||||    
T  4108 tccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactcc 4028  T

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