View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19753_high_11 (Length: 211)
Name: NF19753_high_11
Description: NF19753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19753_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 17104326 - 17104505
Alignment:
| Q |
19 |
aggttatgtgacataagtgagaaatacatggttgagctaagttggtggaatatgttgtttaacaagaaaaatcaacacagtaagaaatgtgatcaataac |
118 |
Q |
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| T |
17104326 |
aggttatgacacatgagtgagaaagacatggttgagctaagcaagcggaatatgttgtttaacataaaaaatcaacacttgaagaaatgtgatcaataac |
17104425 |
T |
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| Q |
119 |
aaaaattcttgatttggtgcaatggtggattgttacatattctttgtatattttaaagtttaatcttagttttaaatatt |
198 |
Q |
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| T |
17104426 |
aaaaattattgatttggtgcaatagtggattgttacatattctttgtatattttaaagtttaatcttagttgtaaatatt |
17104505 |
T |
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