View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19753_low_10 (Length: 266)
Name: NF19753_low_10
Description: NF19753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19753_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 127 - 248
Target Start/End: Original strand, 21872055 - 21872176
Alignment:
| Q |
127 |
ctgaccttgttatcagacaaaccaagctgaataatcccattaggattaaacttaacatgataaggatctttctcaactctttcaattccaacataataaa |
226 |
Q |
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| T |
21872055 |
ctgaccttgttatcagacaaaccaagctgaataatcccattaggattaaacttaacatgataaggatctttctcaactctttcaattccaacataataaa |
21872154 |
T |
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| Q |
227 |
gagaatcatcacgtttggcaac |
248 |
Q |
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| T |
21872155 |
gagaatcatcacgtttggcaac |
21872176 |
T |
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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 21871941 - 21871977
Alignment:
| Q |
15 |
catagggtgggaaaagtaatggcaaacatttattttt |
51 |
Q |
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| T |
21871941 |
catagggtgggaaaagtaatggcaaacatttattttt |
21871977 |
T |
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