View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19755_high_4 (Length: 630)

Name: NF19755_high_4
Description: NF19755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19755_high_4
NF19755_high_4
[»] chr4 (57 HSPs)
chr4 (63-457)||(37827138-37827529)
chr4 (478-621)||(37788378-37788520)
chr4 (478-621)||(52712990-52713132)
chr4 (478-621)||(53677530-53677672)
chr4 (477-621)||(43980424-43980567)
chr4 (477-621)||(55937754-55937897)
chr4 (478-617)||(50768372-50768510)
chr4 (546-621)||(49902021-49902096)
chr4 (478-621)||(3043218-3043360)
chr4 (478-621)||(30776535-30776677)
chr4 (478-621)||(30777414-30777556)
chr4 (478-621)||(32012378-32012520)
chr4 (478-621)||(39970040-39970182)
chr4 (550-621)||(29180463-29180534)
chr4 (477-621)||(9798126-9798269)
chr4 (478-621)||(38187777-38187919)
chr4 (550-621)||(47807193-47807264)
chr4 (550-621)||(51495147-51495218)
chr4 (481-621)||(29899645-29899784)
chr4 (478-621)||(10591554-10591695)
chr4 (550-621)||(1620027-1620098)
chr4 (66-383)||(7771018-7771335)
chr4 (478-621)||(38940796-38940938)
chr4 (476-519)||(5222450-5222493)
chr4 (63-194)||(7789892-7790023)
chr4 (243-372)||(7877345-7877474)
chr4 (17-62)||(37827073-37827118)
chr4 (90-194)||(45366389-45366493)
chr4 (63-137)||(7908191-7908265)
chr4 (478-611)||(27750409-27750541)
chr4 (63-137)||(48902795-48902869)
chr4 (284-372)||(7904657-7904745)
chr4 (65-137)||(50250936-50251008)
chr4 (63-142)||(45372213-45372292)
chr4 (65-184)||(50668862-50668981)
chr4 (549-615)||(5234059-5234125)
chr4 (63-156)||(7237864-7237957)
chr4 (283-383)||(7789703-7789803)
chr4 (281-341)||(7907981-7908041)
chr4 (550-617)||(30012009-30012074)
chr4 (63-194)||(7773970-7774101)
chr4 (65-140)||(48852517-48852592)
chr4 (289-384)||(49044599-49044694)
chr4 (285-383)||(7238086-7238184)
chr4 (282-348)||(7765270-7765336)
chr4 (286-344)||(7822622-7822680)
chr4 (63-137)||(7877583-7877657)
chr4 (66-164)||(7904866-7904963)
chr4 (281-383)||(49041500-49041602)
chr4 (550-595)||(5222370-5222415)
chr4 (478-519)||(30012105-30012146)
chr4 (281-386)||(45372419-45372524)
chr4 (65-137)||(7765481-7765553)
chr4 (284-344)||(7774194-7774254)
chr4 (65-137)||(7786303-7786375)
chr4 (65-137)||(48870399-48870471)
chr4 (65-137)||(48886085-48886157)
[»] scaffold0495 (1 HSPs)
scaffold0495 (478-621)||(4561-4702)
[»] chr8 (38 HSPs)
chr8 (478-621)||(35259990-35260132)
chr8 (478-621)||(24612566-24612708)
chr8 (481-621)||(27621066-27621205)
chr8 (478-621)||(27752519-27752661)
chr8 (478-621)||(35344299-35344442)
chr8 (478-621)||(37598003-37598145)
chr8 (550-621)||(3099957-3100028)
chr8 (550-621)||(34713532-34713603)
chr8 (550-621)||(44052625-44052696)
chr8 (478-621)||(11043990-11044132)
chr8 (477-621)||(32678595-32678738)
chr8 (489-621)||(44411295-44411426)
chr8 (478-617)||(25321676-25321814)
chr8 (478-621)||(36537991-36538133)
chr8 (550-621)||(31133115-31133186)
chr8 (550-617)||(39187237-39187304)
chr8 (478-621)||(33851109-33851251)
chr8 (478-621)||(35346390-35346532)
chr8 (550-621)||(11992732-11992803)
chr8 (550-621)||(37567517-37567588)
chr8 (550-621)||(44358577-44358648)
chr8 (292-384)||(12194914-12195006)
chr8 (292-384)||(12439342-12439434)
chr8 (550-617)||(12108173-12108240)
chr8 (247-372)||(15348487-15348612)
chr8 (281-399)||(4032278-4032396)
chr8 (550-620)||(16643387-16643457)
chr8 (476-519)||(16635370-16635413)
chr8 (476-519)||(16635506-16635549)
chr8 (476-519)||(16635638-16635681)
chr8 (67-137)||(12200161-12200231)
chr8 (67-137)||(12444589-12444659)
chr8 (478-519)||(31133771-31133812)
chr8 (550-615)||(41426343-41426408)
chr8 (296-384)||(12199920-12200008)
chr8 (296-384)||(12444348-12444436)
chr8 (65-137)||(15348719-15348791)
chr8 (551-603)||(27819663-27819715)
[»] chr6 (10 HSPs)
chr6 (478-621)||(10227842-10227984)
chr6 (478-621)||(12278636-12278778)
chr6 (478-621)||(17721894-17722036)
chr6 (478-621)||(30949065-30949207)
chr6 (478-617)||(374029-374167)
chr6 (478-621)||(33756186-33756328)
chr6 (550-621)||(30766447-30766518)
chr6 (478-621)||(17598223-17598365)
chr6 (550-615)||(31887212-31887277)
chr6 (64-133)||(21015667-21015736)
[»] chr1 (39 HSPs)
chr1 (478-621)||(44875109-44875251)
chr1 (478-617)||(28916607-28916745)
chr1 (478-617)||(46949251-46949389)
chr1 (478-617)||(23873919-23874057)
chr1 (478-617)||(25990678-25990816)
chr1 (478-621)||(40935701-40935843)
chr1 (478-621)||(40960562-40960704)
chr1 (478-614)||(26907184-26907319)
chr1 (478-621)||(29488678-29488820)
chr1 (477-621)||(47996883-47997026)
chr1 (478-617)||(28017588-28017726)
chr1 (478-621)||(49924349-49924491)
chr1 (550-621)||(31970397-31970468)
chr1 (550-621)||(40220057-40220128)
chr1 (478-621)||(18036475-18036616)
chr1 (478-617)||(38942533-38942671)
chr1 (478-621)||(45357964-45358106)
chr1 (550-621)||(15311179-15311249)
chr1 (550-621)||(18852224-18852295)
chr1 (478-621)||(39026334-39026476)
chr1 (478-621)||(9127973-9128115)
chr1 (478-621)||(15285734-15285875)
chr1 (550-617)||(43656129-43656196)
chr1 (478-617)||(35941771-35941909)
chr1 (550-621)||(6848394-6848465)
chr1 (478-621)||(4529117-4529259)
chr1 (550-617)||(35884212-35884279)
chr1 (578-621)||(26479768-26479811)
chr1 (578-617)||(35189230-35189269)
chr1 (550-617)||(36383929-36383996)
chr1 (550-611)||(18913444-18913505)
chr1 (477-518)||(35884151-35884192)
chr1 (281-344)||(24309830-24309893)
chr1 (65-131)||(24367025-24367091)
chr1 (476-513)||(1820327-1820364)
chr1 (478-519)||(35189130-35189171)
chr1 (476-513)||(47026406-47026443)
chr1 (548-588)||(3861812-3861851)
chr1 (581-621)||(44056386-44056426)
[»] chr7 (36 HSPs)
chr7 (477-621)||(48879316-48879459)
chr7 (480-621)||(35181123-35181263)
chr7 (478-621)||(45598833-45598975)
chr7 (478-621)||(21654164-21654306)
chr7 (489-621)||(23106393-23106524)
chr7 (478-621)||(43107948-43108091)
chr7 (478-621)||(3157365-3157507)
chr7 (550-621)||(18206362-18206433)
chr7 (477-621)||(34808147-34808290)
chr7 (478-621)||(40583074-40583216)
chr7 (478-617)||(19933102-19933240)
chr7 (478-617)||(19964241-19964379)
chr7 (479-621)||(22111373-22111514)
chr7 (478-621)||(23731489-23731631)
chr7 (478-617)||(36576347-36576485)
chr7 (478-621)||(47383335-47383477)
chr7 (550-621)||(40560382-40560453)
chr7 (478-621)||(41815736-41815878)
chr7 (478-617)||(32491154-32491291)
chr7 (478-621)||(41889100-41889242)
chr7 (550-621)||(41890285-41890356)
chr7 (550-621)||(42617671-42617742)
chr7 (575-621)||(9818493-9818539)
chr7 (575-621)||(10720418-10720464)
chr7 (550-621)||(7989351-7989422)
chr7 (550-621)||(48937932-48938003)
chr7 (550-621)||(48942958-48943029)
chr7 (63-140)||(48883652-48883729)
chr7 (478-617)||(44600375-44600513)
chr7 (550-621)||(33153039-33153110)
chr7 (550-621)||(35084144-35084215)
chr7 (550-604)||(39348789-39348843)
chr7 (478-519)||(7989434-7989475)
chr7 (478-516)||(39348718-39348756)
chr7 (476-518)||(48341575-48341617)
chr7 (478-519)||(41890404-41890445)
[»] chr2 (25 HSPs)
chr2 (478-621)||(33635266-33635408)
chr2 (478-621)||(792440-792582)
chr2 (478-621)||(8784325-8784467)
chr2 (478-621)||(5091624-5091768)
chr2 (550-621)||(14565457-14565528)
chr2 (478-612)||(28424204-28424337)
chr2 (478-621)||(21539687-21539829)
chr2 (478-617)||(29514107-29514245)
chr2 (478-617)||(43075680-43075818)
chr2 (550-621)||(10478179-10478250)
chr2 (478-617)||(29514563-29514700)
chr2 (477-621)||(28492449-28492592)
chr2 (478-621)||(4033759-4033901)
chr2 (478-621)||(35832342-35832484)
chr2 (478-621)||(38549727-38549869)
chr2 (550-617)||(43451506-43451573)
chr2 (550-621)||(44803899-44803970)
chr2 (550-617)||(18833998-18834065)
chr2 (577-621)||(10979197-10979241)
chr2 (550-621)||(4092012-4092083)
chr2 (550-621)||(15068736-15068807)
chr2 (478-519)||(15858795-15858836)
chr2 (550-621)||(13822854-13822925)
chr2 (478-519)||(14565559-14565600)
chr2 (478-519)||(18834097-18834138)
[»] chr5 (22 HSPs)
chr5 (477-621)||(20914790-20914933)
chr5 (478-617)||(31690709-31690847)
chr5 (477-621)||(8146098-8146241)
chr5 (477-621)||(8541649-8541792)
chr5 (550-621)||(17825283-17825354)
chr5 (550-621)||(42365038-42365109)
chr5 (478-621)||(13146661-13146803)
chr5 (478-621)||(16286168-16286310)
chr5 (478-621)||(24432485-24432627)
chr5 (478-621)||(30086633-30086775)
chr5 (478-621)||(35462803-35462945)
chr5 (550-621)||(12638892-12638963)
chr5 (550-621)||(37066308-37066379)
chr5 (476-621)||(31316886-31317030)
chr5 (570-621)||(25962533-25962584)
chr5 (281-367)||(29695782-29695868)
chr5 (247-344)||(29687704-29687801)
chr5 (549-621)||(2002218-2002290)
chr5 (550-617)||(24439575-24439642)
chr5 (281-344)||(1812078-1812141)
chr5 (550-621)||(8143937-8144008)
chr5 (478-519)||(32433587-32433628)
[»] chr3 (33 HSPs)
chr3 (478-621)||(46580467-46580609)
chr3 (478-621)||(26641159-26641301)
chr3 (476-621)||(46296124-46296268)
chr3 (478-621)||(28793092-28793235)
chr3 (478-621)||(53020113-53020256)
chr3 (478-621)||(23513498-23513640)
chr3 (478-621)||(55400669-55400811)
chr3 (550-621)||(52172057-52172128)
chr3 (478-617)||(31126143-31126281)
chr3 (570-621)||(45347760-45347811)
chr3 (550-621)||(49068053-49068124)
chr3 (550-621)||(51255188-51255259)
chr3 (550-617)||(51426621-51426688)
chr3 (550-621)||(52252038-52252109)
chr3 (478-615)||(1335041-1335177)
chr3 (478-617)||(21654175-21654314)
chr3 (478-621)||(16739207-16739344)
chr3 (478-621)||(45781328-45781470)
chr3 (550-621)||(32322286-32322357)
chr3 (550-621)||(37324131-37324202)
chr3 (550-617)||(43575959-43576026)
chr3 (63-184)||(11015663-11015784)
chr3 (574-621)||(34022625-34022672)
chr3 (63-142)||(47452051-47452130)
chr3 (478-614)||(13541208-13541343)
chr3 (478-602)||(46819980-46820103)
chr3 (289-344)||(11006332-11006387)
chr3 (550-621)||(36189053-36189124)
chr3 (550-621)||(51309415-51309486)
chr3 (551-621)||(46303547-46303617)
chr3 (283-372)||(11024901-11024990)
chr3 (478-519)||(45347816-45347857)
chr3 (550-590)||(40936390-40936430)
[»] scaffold0508 (2 HSPs)
scaffold0508 (100-142)||(12168-12210)
scaffold0508 (281-344)||(11915-11978)


Alignment Details
Target: chr4 (Bit Score: 357; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 63 - 457
Target Start/End: Original strand, 37827138 - 37827529
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggagg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  37827138 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacctgaacctttaatttgaagacgaaaacaaaattcgggagg 37827237  T
Q  163 cgtaaaattgaggttgagtgaatcaggatcatttttaaacgattattcaaaatctctagattgaattggaattgatgaatgtgatatgaacagaattcga 262  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37827238 cgtaaaattgaggttgagtgaatcaggatcatttttaaacgatgattcaaaatctctagattgaattggaattgatgaatgtgatatgaacagaattcga 37827337  T
Q  263 cgagtttgtgctgtggccgtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataa 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37827338 cgagtttgtgctgtggccgtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaacgcatgtaaaacttataa 37827437  T
Q  363 gagacatcactgacaacctcagtaagatttcgatgatgatcaagtcgtgaggtagatacagcttttgattctccatacggctttgtttttcttag 457  Q
    ||||| |||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37827438 gagacttcactgacaacctcagtaagatttc---gatgatcaagttgtgaggtagatacagcttttgattctccatacggctttgtttttcttag 37827529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 37788378 - 37788520
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  37788378 aaaatataagtaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaacttgcatttaatt 37788476  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  37788477 tgttctcttttttattttctccataatttttaaccaatgagaat 37788520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 52712990 - 52713132
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||||||||||||||||||||| |||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||||||||    
T  52712990 aaaatataagtaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcatttaatt 52713088  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  52713089 tgttctcctttttattttctccataattttcaaccaataagaat 52713132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 53677672 - 53677530
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  53677672 aaaatataagcaaaaaaaaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 53677574  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  53677573 tgttctcctttttattttctccataatttttaaccaatgagaat 53677530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 621
Target Start/End: Original strand, 43980424 - 43980567
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    |||||||||||||||||| |||||||||||| ||||||||||        ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  43980424 taaaatataagtaaaaaataccaacttttatgctattattatattttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaat 43980522  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  43980523 gtgttctcctttttattttctccataatttttaaccaatgagaat 43980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 55937897 - 55937754
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| |||||||||||||||||||  |||| |||||       ||||||||||||       ||| ||||||||||||||  || ||||||||    
T  55937897 taaaatataagcaaaaaagaccaacttttatgatatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgtatttaat 55937799  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  55937798 ttgttctcctttttatcttctccataatttttaaccaatgagaat 55937754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 50768372 - 50768510
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  50768372 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 50768470  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50768471 tgttctcctttttattttctccataatttttaaccaatga 50768510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 546 - 621
Target Start/End: Original strand, 49902021 - 49902096
Alignment:
Q  546 aatataaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49902021 aatataaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 49902096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 3043360 - 3043218
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||||||||  ||||||| |||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||     
T  3043360 aaaatataagcgaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatg 3043262  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3043261 tgttctcctttttattttctccataatttttaaccaatgagaat 3043218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 30776677 - 30776535
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||       ||| |||| |||       ||| |||||||||||||| |||  ||| ||||    
T  30776677 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 30776579  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30776578 tgttctcctttttattttctccataatttttaaccaatgagaat 30776535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 30777414 - 30777556
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||       ||| |||| |||       ||| |||||||||||||| |||  ||| ||||    
T  30777414 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 30777512  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30777513 tgttctcctttttattttctccataatttttaaccaatgagaat 30777556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 32012520 - 32012378
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| ||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  32012520 aaaatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaatt 32012422  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||||||||||||||||| ||||||||||||||||||||||    
T  32012421 tattctcctttttattttctctataatttttaaccaatgagaat 32012378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 39970182 - 39970040
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| || |||||| |||||||||||       || |||||||||       ||| |||||||||||||| |||  ||| ||||    
T  39970182 aaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaccaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 39970084  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39970083 tgttctcctttttattttctccataatttttaaccaatgagaat 39970040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 29180534 - 29180463
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29180534 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 29180463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 9798269 - 9798126
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| |||||||| |||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  9798269 taaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattggattcaat 9798171  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
     ||||||||||||||||||||||||||||| ||| ||||||||||    
T  9798170 gtgttctcctttttattttctccataatttgtaatcaatgagaat 9798126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 38187919 - 38187777
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||||||||||||||||| |||||||||| |||||| ||||       ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  38187919 aaaatataagtaaaaaagatcaacttttatgctattagtatgtattttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcattcaatt 38187821  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  38187820 tgttctcttttttattttctccataatttttaacaaatgagaat 38187777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 47807193 - 47807264
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47807193 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaacgagaat 47807264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 51495147 - 51495218
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51495147 taaaattaaatgcaaattgcattcaatttattctcctttttattttctccataatttttaaccaatgagaat 51495218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 621
Target Start/End: Original strand, 29899645 - 29899784
Alignment:
Q  481 atataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgt 580  Q
    ||||||| ||||||||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  |||||||||||    
T  29899645 atataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatttgt 29899743  T
Q  581 tctcctttttattttctccataatttttaaccaatgagaat 621  Q
    || |||||||||||||| ||| |||||||||||||||||||    
T  29899744 tcacctttttattttcttcatgatttttaaccaatgagaat 29899784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 10591695 - 10591554
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| || |||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  10591695 aaaatataag-aaaaaagactaatttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 10591598  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
     ||||||||||||||||| |||||||||||||||||||||||||    
T  10591597 ggttctcctttttattttttccataatttttaaccaatgagaat 10591554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 1620027 - 1620098
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  1620027 taaaattaaatgcaatttgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaat 1620098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 66 - 383
Target Start/End: Complemental strand, 7771335 - 7771018
Alignment:
Q  66 tggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggaggcgt 165  Q
    ||||||||||||||| || |||||||  ||  |||| ||||| || |||||||||||| |||||| |||||| || | ||||| ||||||| ||| |||     
T  7771335 tggatggattccataagtggatgtttggaggtcggtacaaaagtataaaccctctacacgaacctctaatttcaacaggaaaataagattctggaagcga 7771236  T
Q  166 aaaattgaggttgagtgaatcaggatcatttttaaacgattattcaaaatctctagattgaattggaattgatgaatgtgatatgaacagaattcgacga 265  Q
    |||||| ||||| | |||| |||||||||  ||||   ||  |||||||||| ||||| |||||  |   |||  |  ||||||| | | || || || |    
T  7771235 aaaattaaggttcactgaagcaggatcatcgttaagaaatgcttcaaaatctatagatcgaatttcatgagattgagttgatatgcataaaaatctacaa 7771136  T
Q  266 gtttgtgctgtggccgtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagag 365  Q
    || |||| ||  |  | ||||||||||||||||||| ||||||  |||| ||| |||||||  ||||| |||||||||| |||| | |||| ||||||||    
T  7771135 gtgtgtgttgcagaggcaagttgaaaatgtgaattttcaaagtgaggatcagagataagagaaaaccaagacttacaaacgcatttgaaacatataagag 7771036  T
Q  366 acatcactgacaacctca 383  Q
    || |||| | ||||||||    
T  7771035 acttcaccggcaacctca 7771018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 38940796 - 38940938
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  38940796 aaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 38940894  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | |||| ||||||||||| |||| ||||||||| ||||||||||    
T  38940895 tattcttctttttattttttccaaaatttttaatcaatgagaat 38940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 5222493 - 5222450
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5222493 ctaaaatataagtaaaaaagaccaacttttatactattattatg 5222450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 7790023 - 7789892
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggagg 162  Q
    |||||||||||||||||| || |||||||  ||  |||| ||||| || |||||||||||| |||||| |||||| || | ||||| ||||||| ||| |    
T  7790023 cagtggatggattccataagtggatgtttggaggtcggtacaaaagtataaaccctctacacgaacctctaatttaaacaggaaaataagattctggaag 7789924  T
Q  163 cgtaaaattgaggttgagtgaatcaggatcat 194  Q
    || |||||| ||||| | |||| |||||||||    
T  7789923 cgaaaaattaaggttcactgaagcaggatcat 7789892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 243 - 372
Target Start/End: Complemental strand, 7877474 - 7877345
Alignment:
Q  243 gtgatatgaacagaattcgacgagtttgtgctgtggccgtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttaca 342  Q
    |||||||| ||| ||||| | |||| || | |||||  || ||||||||||||||||||||||| | ||||| ||| |||||||  ||||||  ||||||    
T  7877474 gtgatatgcacataattctaggagtgtgcgttgtggtggtgagttgaaaatgtgaatttgcaaaattgggatcagagataagagaaaaccatagcttaca 7877375  T
Q  343 aatgcatgtaaaacttataagagacatcac 372  Q
    ||||||| | |||| |||||||||| ||||    
T  7877374 aatgcatttgaaacgtataagagacttcac 7877345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 37827073 - 37827118
Alignment:
Q  17 agaacccaaataatattcttccaaattggagttaaaaggagacaag 62  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  37827073 agaaccgaaataatattcttccaaattggagttaaaaggagacaag 37827118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 45366389 - 45366493
Alignment:
Q  90 ttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggaggcgtaaaattgaggttgagtgaatcagg 189  Q
    ||||||||| |||||||| || ||| |||||||||||||||||||||||||||  | || ||||||||||| ||  |||||  || ||||||||| |||     
T  45366389 ttaaagaacagtgcaaaagtataaagcctctacatgaacctttaatttgaagatcagaataagattcgggaagcagaaaatgaagattgagtgaagcaga 45366488  T
Q  190 atcat 194  Q
    |||||    
T  45366489 atcat 45366493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 7908265 - 7908191
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||| |||||||||||||||||||||| |  || ||||| ||||| || ||||||||||||||||||| ||||||    
T  7908265 cagtagatggattccatatgtagatgtctggaggacggtacaaaagtataaaccctctacatgaacctctaattt 7908191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 611
Target Start/End: Complemental strand, 27750541 - 27750409
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| | || |||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  27750541 aaaatataagcataacagaccaacttttatgctatttttatgttatttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 27750443  T
Q  578 tgttctcctttttattttctccataatttttaac 611  Q
    |||||| ||||||||||| |||||||||||||||    
T  27750442 tgttcttctttttattttttccataatttttaac 27750409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 48902869 - 48902795
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    ||||||| ||||||||||  |||||| | ||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  48902869 cagtggaaggattccataaatagatggtgaaagaacagtgcaaaagtacaaaccctctgcatgaacctataattt 48902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 7904745 - 7904657
Alignment:
Q  284 agttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcac 372  Q
    |||||||||||||||||||||||||  |||| ||| |||||||  |||||| |||||||||  ||| | |||| |||||||||| ||||    
T  7904745 agttgaaaatgtgaatttgcaaagtgaggatcagagataagagaaaaccataacttacaaacacatttgaaacgtataagagacttcac 7904657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 50250936 - 50251008
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||||| ||||| | || || ||| ||| ||||||| ||| ||||||||||||||||||||||    
T  50250936 gtggatggattccataggtagaggcttgaaaaacagtggaaaaatataaatcctctacatgaacctttaattt 50251008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 45372213 - 45372292
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaaga 142  Q
    ||||||||||||||||||  |||| | || ||  ||  |||||||||| |||||||||||||||||||||||||| ||||    
T  45372213 cagtggatggattccatagatagaaggttgaattaccatgcaaaaatataaaccctctacatgaacctttaatttcaaga 45372292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 50668981 - 50668862
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggaggcg 164  Q
    |||||||||||||||||| |||||||  ||||||  |||||||||| ||| |||||||| |||||| |||| | | ||  |||| ||||||  ||| | |    
T  50668981 gtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatcaggagtaaaataagattgaggaagtg 50668882  T
Q  165 taaaattgaggttgagtgaa 184  Q
     |||||| ||||||||||||    
T  50668881 aaaaattaaggttgagtgaa 50668862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 549 - 615
Target Start/End: Complemental strand, 5234125 - 5234059
Alignment:
Q  549 ataaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaat 615  Q
    ||||||||||||| | |||  ||| ||||| |||||||||||||||||||||||||  |||||||||    
T  5234125 ataaaattaaatgtaaattgcattcaatttattctcctttttattttctccataataattaaccaat 5234059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 7237864 - 7237957
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattc 156  Q
    |||||||||||||||||| ||||||||||  ||   ||| ||||| || ||||||||||||||||||| | |||| || | ||||| |||||||    
T  7237864 cagtggatggattccatacgtagatgtttggaggttggtacaaaagtataaaccctctacatgaacctctgatttcaacaggaaaataagattc 7237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 383
Target Start/End: Complemental strand, 7789803 - 7789703
Alignment:
Q  283 aagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctc 382  Q
    ||||||||||||||||||| ||||||  ||||  || |||| ||  ||||| |||||||||| |||| | |||| |||||||||| |||| | |||||||    
T  7789803 aagttgaaaatgtgaattttcaaagtgaggatcggagataaaagaaaaccaagacttacaaacgcatttgaaacatataagagacttcaccggcaacctc 7789704  T
Q  383 a 383  Q
    |    
T  7789703 a 7789703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 7908041 - 7907981
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttac 341  Q
    |||||||||||||||||||||||||| | ||||  ||| |||||||  |||||||||||||    
T  7908041 gtaagttgaaaatgtgaatttgcaaaatggggagcagagataagagaaaaccatgacttac 7907981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 617
Target Start/End: Complemental strand, 30012074 - 30012009
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| ||||||||||  |||||||||||||||||||  |||||||||||    
T  30012074 taaaattaaatgcaaattgcattcaatttgttct--tttttattttctccataataattaaccaatga 30012009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 7773970 - 7774101
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggagg 162  Q
    |||||||||||||||||||||||||||||     ||| | ||||| || |||||||||||| |||||| |||||| |    ||||| ||||||| ||| |    
T  7773970 cagtggatggattccatatgtagatgtttgggtcacgatacaaaagtataaaccctctacacgaacctctaatttcagccggaaaataagattctggaag 7774069  T
Q  163 cgtaaaattgaggttgagtgaatcaggatcat 194  Q
    || |||||| ||||| | |||| ||| |||||    
T  7774070 cgaaaaattaaggttcactgaagcagtatcat 7774101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 48852592 - 48852517
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaa 140  Q
    ||||||||||||||||  || || | | |||||||||||||||||| ||| |||||||||||| | ||||| ||||    
T  48852592 gtggatggattccatagataaatctctgaagaacggtgcaaaaatataaagcctctacatgaagcattaatatgaa 48852517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 49044599 - 49044694
Alignment:
Q  289 aaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctcag 384  Q
    |||||||||||||||||||| ||  | ||| |||||||  |||||| |||||||||  ||  | |||| || |||||||||||||| |||||||||    
T  49044599 aaaatgtgaatttgcaaagtgggtttgagagataagagaaaaccataacttacaaacacacttgaaacgtaaaagagacatcactggcaacctcag 49044694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 285 - 383
Target Start/End: Original strand, 7238086 - 7238184
Alignment:
Q  285 gttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctca 383  Q
    |||| |||||||||||||||||||  || | ||| |||||||  ||||| ||||||||||  ||| | ||||  ||||||||| |||||| ||||||||    
T  7238086 gttggaaatgtgaatttgcaaagtgagggtcagagataagagaaaaccaagacttacaaacacatttgaaacagataagagacttcactggcaacctca 7238184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 7765336 - 7765270
Alignment:
Q  282 taagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgca 348  Q
    ||||||| |||||||||||||||||||  |||| ||| |||| ||  |||||| |||||||||||||    
T  7765336 taagttggaaatgtgaatttgcaaagtgaggatcagagataatagaaaaccataacttacaaatgca 7765270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 7822680 - 7822622
Alignment:
Q  286 ttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    |||||| |||||||||||||||| ||||| ||| |||||||  |||||||| |||||||    
T  7822680 ttgaaattgtgaatttgcaaagtggggatcagagataagagaaaaccatgatttacaaa 7822622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 7877657 - 7877583
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||||||||||||||| ||  |  || || ||||| || ||||||||| ||||||||| ||||||    
T  7877657 cagtggatggattccatatgtagatgattggatgacagtacaaaagtataaaccctctgcatgaacctctaattt 7877583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 7904963 - 7904866
Alignment:
Q  66 tggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggaggcg 164  Q
    ||||||||||||||||| |||||||| ||   |||| ||||| || |||||||||||| |||||| |||||| ||   ||||| ||||||||||| |||    
T  7904963 tggatggattccatatg-agatgtttgaacggcggtacaaaagtataaaccctctacacgaacctctaatttcaactggaaaataagattcgggaagcg 7904866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 49041500 - 49041602
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacc 380  Q
    ||||||| |||||| ||||||||||| | ||||| ||| |||||||  ||||| ||||| |||| |||| | ||||  ||||||||| |||||| ||| |    
T  49041500 gtaagttaaaaatgagaatttgcaaaatggggatcagagataagagaaaaccaagacttgcaaacgcatttgaaacaaataagagacttcactggcaatc 49041599  T
Q  381 tca 383  Q
    |||    
T  49041600 tca 49041602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 595
Target Start/End: Complemental strand, 5222415 - 5222370
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttatttt 595  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||    
T  5222415 taaaattaaatgcaaattgcattgaatttgttctcctttttatttt 5222370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 30012146 - 30012105
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| |||||||| |||||||||| |||||||||||    
T  30012146 aaaatataagcaaaaaagatcaacttttattctattattatg 30012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 45372419 - 45372524
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacc 380  Q
    |||| ||||||||||||||||||||| |  |||| ||| |||| ||  ||||| ||||||||||  ||| | |||| |||||||||| |||| | |||||    
T  45372419 gtaatttgaaaatgtgaatttgcaaaatgaggatcagagataatagaaaaccaagacttacaaacacatttgaaacgtataagagacttcaccggcaacc 45372518  T
Q  381 tcagta 386  Q
    | ||||    
T  45372519 ttagta 45372524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 7765553 - 7765481
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||| ||||| ||||||  |  ||||| || ||||| ||| ||||||||||| ||||||||||    
T  7765553 gtggatggattccaaatgtatatgtttggatgacggtacataaatataaaacctctacatgaccctttaattt 7765481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 7774194 - 7774254
Alignment:
Q  284 agttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||  ||||||  ||||||||    
T  7774194 agttgaaaatgtgaatttgcaaaatggggatcagagataagagaaaaccatagcttacaaa 7774254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 7786375 - 7786303
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||||||||| ||||||  |  ||| | || ||||| ||| ||||||||||| ||||||||||    
T  7786375 gtggatggattccatatgtaaatgtttggatgacgatacataaatataaaacctctacatgaccctttaattt 7786303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 48870471 - 48870399
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||||| ||||| | ||  || ||  ||||| |||| ||| ||||||||||||||||||||||    
T  48870471 gtggatggattccataggtagagggttggagcacaatgcaataatataaagcctctacatgaacctttaattt 48870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 48886157 - 48886085
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||||| ||||| | ||  || ||  ||||| |||| ||| ||||||||||||||||||||||    
T  48886157 gtggatggattccataggtagagggttggagcacaatgcaataatataaagcctctacatgaacctttaattt 48886085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 4561 - 4702
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       |||||||||||||||||| |||  ||| |||     
T  4561 aaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatctttcc--aatataaaattaaatgcaaattgcattcaatg 4658  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4659 tgttctcctttttattttctccataatttttaaccaatgagaat 4702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 35259990 - 35260132
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  35259990 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattccattcaatt 35260088  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35260089 tgttctcctttttattttctccataatttttaaccaatgagaat 35260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 24612708 - 24612566
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  24612708 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaagttgcattcaatt 24612610  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24612609 tgttctcctttttattttctccataatttttaaccaatgagaat 24612566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 481 - 621
Target Start/End: Original strand, 27621066 - 27621205
Alignment:
Q  481 atataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgt 580  Q
    ||||||| ||||||||| ||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||||||    
T  27621066 atataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatttgt 27621164  T
Q  581 tctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27621165 tctcctttttattttctccataatttttaaccaatgagaat 27621205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 27752519 - 27752661
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||  ||||||||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  27752519 aaaatataaacaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 27752617  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27752618 tgttctcctttttattttctccataatttttaaccaatgagaat 27752661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 35344299 - 35344442
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||| |||||| |||||||||||       |||||||||||        ||| |||||||||||||| |||  ||| |||     
T  35344299 aaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcattttttttcaatgtaaaattaaatgcaaattgcattcaatg 35344398  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  35344399 tattctcctttttattttctccataatttttaaccaatgagaat 35344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 37598003 - 37598145
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  | ||||||||       |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  37598003 aaaatataagcaaaaaagaccaacttttatgttgttattatgttttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaaattgcattcaatt 37598101  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37598102 tgttctcctttttattttctccataatttttaaccaatgagaat 37598145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 3099957 - 3100028
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3099957 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 3100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 34713532 - 34713603
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34713532 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 34713603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 44052625 - 44052696
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44052625 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 44052696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 11043990 - 11044132
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||| |||||||        ||| ||||||||||||||  ||  ||| ||||    
T  11043990 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaataaatcat-attttccaatgtaaaattaaatgcaagttgcattcaatt 11044088  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  11044089 tgttctcctttttgttttctccataatttttaaccaatgagaat 11044132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 32678738 - 32678595
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| ||||||||  |||||||||  ||||||||||       ||||||||||||       ||| ||||||||||||||  ||  |||||||    
T  32678738 taaaatataagcaaaaaagataaacttttatgttattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaat 32678640  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  32678639 ttgttcttctttttattttctccataatttttaaccaatgagaat 32678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 621
Target Start/End: Complemental strand, 44411426 - 44411295
Alignment:
Q  489 aaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 588  Q
    ||||||||||||||||||| ||||||||||        ||||||||||||       ||| |||||||||||||| |||  ||| ||| |||||||||||    
T  44411426 aaaaaagaccaacttttatgctattattatattttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaatgtgttctccttt 44411328  T
Q  589 ttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||    
T  44411327 ttattttctccataatttttaaccaatgagaat 44411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 25321814 - 25321676
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  25321814 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 25321716  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    || |||||||||||||||||||||||||||||||| ||||    
T  25321715 tgctctcctttttattttctccataatttttaacctatga 25321676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 36537991 - 36538133
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| ||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  36537991 aaaatataagcaaaaaagacaaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaatttgcatttaatt 36538089  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | |||||||||||||||||||||| |||||||||||||||||||    
T  36538090 tattctcctttttattttctccatgatttttaaccaatgagaat 36538133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 31133186 - 31133115
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31133186 taaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaat 31133115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 39187237 - 39187304
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39187237 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatga 39187304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 33851251 - 33851109
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  33851251 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 33851153  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||    
T  33851152 tgttttcctttttattttctccatgatttttaactaatgagaat 33851109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 35346532 - 35346390
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||||||| ||||||||| |||||||||| |||||||||||       ||||||||||||       ||| ||||||| |||||| |||  ||| |||     
T  35346532 aaaatataaataaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctttttc-aatgtaaaattgaatgcaaattgcattcaatg 35346434  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | |||||||||||||| |||||||||||||||||||||||||||    
T  35346433 tattctcctttttattatctccataatttttaaccaatgagaat 35346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 11992732 - 11992803
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11992732 taaaattaaatgcaaattgcattcaatttgttcacctttttcttttctccataatttttaaccaatgagaat 11992803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 37567588 - 37567517
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  37567588 taaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaatcaatgagaat 37567517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 44358648 - 44358577
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  44358648 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaattaatgagaat 44358577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 292 - 384
Target Start/End: Complemental strand, 12195006 - 12194914
Alignment:
Q  292 atgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctcag 384  Q
    |||||||||||||||||  |||| ||| ||||||| |||||||||||||||||||||| | |||| || ||||||| |||| | |||||||||    
T  12195006 atgtgaatttgcaaagtgtggatcagagataagagataaccatgacttacaaatgcatttgaaacataaaagagacttcaccggcaacctcag 12194914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 292 - 384
Target Start/End: Complemental strand, 12439434 - 12439342
Alignment:
Q  292 atgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctcag 384  Q
    |||||||||||||||||  |||| ||| ||||||| |||||||||||||||||||||| | |||| || ||||||| |||| | |||||||||    
T  12439434 atgtgaatttgcaaagtgtggatcagagataagagataaccatgacttacaaatgcatttgaaacataaaagagacttcaccggcaacctcag 12439342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 12108173 - 12108240
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||| |||||| |||  ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12108173 taaaattcaatgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatga 12108240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 15348612 - 15348487
Alignment:
Q  247 tatgaacagaattcgacgagtttgtgctgtggccgtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatg 346  Q
    |||| ||| ||||| |||||| |||| || ||| |||| |||||||||||||||||| ||||  |||| ||| |||||||  ||||| |||||||||| |    
T  15348612 tatgcacaaaattctacgagtgtgtgttgcggcggtaatttgaaaatgtgaatttgcgaagtaaggatcagagataagagaaaaccaagacttacaaacg 15348513  T
Q  347 catgtaaaacttataagagacatcac 372  Q
    ||| | |||| |||||||||| ||||    
T  15348512 catttgaaacgtataagagacttcac 15348487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 399
Target Start/End: Original strand, 4032278 - 4032396
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacc 380  Q
    |||| ||||||||| |||||||||||||  |||| |||||||||||||||||| || |||||||  ||  | |||| |||||||||| ||| ||  |  |    
T  4032278 gtaatttgaaaatgcgaatttgcaaagtgaggatcagatataagagttaaccaagatttacaaacacacttgaaacgtataagagacttcattggtagtc 4032377  T
Q  381 tcagtaagatttcgatgat 399  Q
    |||||||||||| ||||||    
T  4032378 tcagtaagatttggatgat 4032396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 620
Target Start/End: Original strand, 16643387 - 16643457
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaa 620  Q
    |||||||||||||| |||| ||| || || || ||||||||||||||||||||||  || |||||||||||    
T  16643387 taaaattaaatgcaaattacattcaagttattttcctttttattttctccataatcattgaccaatgagaa 16643457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 16635370 - 16635413
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||    
T  16635370 ctaaaatataagtaagaaagaccaacttttatgctattactatg 16635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 16635506 - 16635549
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||    
T  16635506 ctaaaatataagtaagaaagaccaacttttatgctattactatg 16635549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 16635638 - 16635681
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||    
T  16635638 ctaaaatataagtaagaaagaccaacttttatgctattactatg 16635681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 12200231 - 12200161
Alignment:
Q  67 ggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||| |||||| |||    ||| |||||| |||| ||||||||| ||||||||||||||||    
T  12200231 ggatggattccatacgtagatatttgtccaacagtgcaagaatataaaccctctgcatgaacctttaattt 12200161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 12444659 - 12444589
Alignment:
Q  67 ggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    |||||||||||||| |||||| |||    ||| |||||| |||| ||||||||| ||||||||||||||||    
T  12444659 ggatggattccatacgtagatatttgtccaacagtgcaagaatataaaccctctgcatgaacctttaattt 12444589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 31133812 - 31133771
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| ||||||||||||||||||| ||||| |||||    
T  31133812 aaaatataagaaaaaaagaccaacttttatgctattgttatg 31133771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 615
Target Start/End: Original strand, 41426343 - 41426408
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaat 615  Q
    |||||||||||||| |||  ||| |||||||| |||||| |||| ||||||||||  |||||||||    
T  41426343 taaaattaaatgcaaattgcattcaatttgttatcctttctattatctccataatcattaaccaat 41426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 384
Target Start/End: Complemental strand, 12200008 - 12199920
Alignment:
Q  296 gaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctcag 384  Q
    |||||||||||||  |||| ||| |||||||  ||||||||||||||||  ||| | |||| || ||||||| |||| | |||||||||    
T  12200008 gaatttgcaaagtgaggatcagagataagagaaaaccatgacttacaaacacatttgaaacataaaagagacttcaccggcaacctcag 12199920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 384
Target Start/End: Complemental strand, 12444436 - 12444348
Alignment:
Q  296 gaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcactgacaacctcag 384  Q
    |||||||||||||  |||| ||| |||||||  ||||||||||||||||  ||| | |||| || ||||||| |||| | |||||||||    
T  12444436 gaatttgcaaagtgaggatcagagataagagaaaaccatgacttacaaacacatttgaaacataaaagagacttcaccggcaacctcag 12444348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 15348791 - 15348719
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaattt 137  Q
    ||||||||||||||||  |||| | || || ||  || ||||| |||||| ||||||||||||||||||||||    
T  15348791 gtggatggattccatagatagaggattgaataatagttcaaaagtacaaagcctctacatgaacctttaattt 15348719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 603
Target Start/End: Original strand, 27819663 - 27819715
Alignment:
Q  551 aaaattaaatgcagattatatttaatttgttctcctttttattttctccataa 603  Q
    ||||||||||||| | || |||||||||| ||||| |||||||||||| ||||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataa 27819715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 10227842 - 10227984
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       |||||||||||||||||| |||  ||| |||     
T  10227842 aaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatcttttcc-aatataaaattaaatgcaaattgcattcaatg 10227940  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10227941 tgttctcctttttattttctccataatttttaaccaatgagaat 10227984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 12278636 - 12278778
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| ||||||||||  ||||||||||       |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  12278636 aaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaaacaaatcat-tttttcaaatgtaaaattaaatgcaaattgcattcaatt 12278734  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12278735 tgttctcctttttattttctccataatttttaaccaatgagaat 12278778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 17722036 - 17721894
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||| |||||||        ||| |||||||||||||| |||  ||| ||||    
T  17722036 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaagaaatcat-attttccaatgtaaaattaaatgcaaattgcattcaatt 17721938  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  17721937 tgttctcctttttattttctccataatttttaacaaatgagaat 17721894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 30949065 - 30949207
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| ||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  30949065 aaaatataagcaaaaaagactaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 30949163  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  30949164 tgttctcctttttattttctctataatttttaaccaatgagaat 30949207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 374029 - 374167
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       |||||||||||        | | |||||||||||||| |||  ||| ||||    
T  374029 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatattttccga-tgtaaaattaaatgcaaattgcattcaatt 374127  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  374128 tgttctcctttttattttctctataatttttaaccaatga 374167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 33756186 - 33756328
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| |||||||||||       |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  33756186 aaaatataagaaaaaaataccaacttttatgctattattatgttttttcaaacaaatcat-ttttttcaatgtaaaattaaatgcaaattgcattcaatt 33756284  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||| |||||||| |||||||||||||||||||||||||||||||    
T  33756285 tgtcctccttttcattttctccataatttttaaccaatgagaat 33756328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 30766447 - 30766518
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  30766447 taaaattaaatgcaaattgcattgaatttgttctcctttttattttctccataatttttaactaatgagaat 30766518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 17598223 - 17598365
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||| |||  ||||||||||       ||||||||| ||       ||| |||||||||||||| |||  ||| ||||    
T  17598223 aaaatataagcaaaaaagaccaacttgtatgttattattatgttttttcaaacaaatcttcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 17598321  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||| ||||||||||||||||||||||||||||||||||||    
T  17598322 tattctcttttttattttctccataatttttaaccaatgagaat 17598365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 550 - 615
Target Start/End: Complemental strand, 31887277 - 31887212
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaat 615  Q
    ||||||||||||||  ||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  31887277 taaaattaaatgcaagttgcatttaatttgttctcttttttattttctccataatttttaaccaat 31887212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 21015736 - 21015667
Alignment:
Q  64 agtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaaccttta 133  Q
    ||||||||||||||||| |||||||||| ||  | |||||||||||| ||||||||||||||||| ||||    
T  21015736 agtggatggattccataggtagatgtttgaatcatggtgcaaaaatataaaccctctacatgaacattta 21015667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 44875109 - 44875251
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  44875109 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 44875207  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44875208 tgttctcctttttattttctccataatttttaaccaatgagaat 44875251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 28916745 - 28916607
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||| ||||||||| |||||||||||       ||||||||||||       |||||||||||||||||| |||  ||| ||||    
T  28916745 aaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatataaaattaaatgcaaattgcattcaatt 28916647  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  28916646 tgttcttctttttattttctccataatttttaaccaatga 28916607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 46949251 - 46949389
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||       ||||||||||||       ||| |||||||||||||| ||| |||| ||||    
T  46949251 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgtattcaatt 46949349  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46949350 tgttctcctttttattttctccataatttttaaccaatga 46949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 23874057 - 23873919
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||| | ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||||||||    
T  23874057 aaaatatacgcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcatttaatt 23873959  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  23873958 tgttctcttttttattttctccataatttttaaccaatga 23873919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 25990678 - 25990816
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||| |||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  25990678 aaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 25990776  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25990777 tgttctcctttttattttctccataatttttaaccaatga 25990816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 40935843 - 40935701
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  40935843 aaaatataagcaaaaaagatcaacttttatgctatttttatgtttcttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 40935745  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40935744 tgttctcctttttattttctccataatttttaaccaatgagaat 40935701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 40960704 - 40960562
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  40960704 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaagttgcatttaatt 40960606  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40960605 tgttctcctttttattttctccataatttttaaccaatgagaat 40960562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 614
Target Start/End: Complemental strand, 26907319 - 26907184
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||||||||||||| |||||||||||       |||||||| |||       ||| |||||||||||||| |||  ||| ||||    
T  26907319 aaaatataagtaaaaaagaccaacttttatgctattattatgttttttcaaacaaattatctttttc-aatgtaaaattaaatgcaaattgcattcaatt 26907221  T
Q  578 tgttctcctttttattttctccataatttttaaccaa 614  Q
    | |||||||||||||||||||||||||||||||||||    
T  26907220 tattctcctttttattttctccataatttttaaccaa 26907184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 29488678 - 29488820
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       |||||||| ||        ||| ||||||||||||||  ||  ||| ||||    
T  29488678 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaataat-attttccaatgtaaaattaaatgcaagttgcattcaatt 29488776  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29488777 tgttctcctttttattttctccataatttttaaccaatgagaat 29488820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 477 - 621
Target Start/End: Original strand, 47996883 - 47997026
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| |||||||| ||| |||||| |||||||||||       ||||||||||||       ||| ||||||||||| || ||| |||| |||    
T  47996883 taaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatacaaattgtattcaat 47996981  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  47996982 ttgttctcctttttattttctccataatttttaactaatgagaat 47997026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 28017588 - 28017726
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||     
T  28017588 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatg 28017686  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28017687 tgttctcctttttattttctccataatttttaaccaatga 28017726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 49924349 - 49924491
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||| ||||||||    
T  49924349 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttacatttaatt 49924447  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  49924448 tgttctcctttttattttcttcatgatttttaaccaatgagaat 49924491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 31970468 - 31970397
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31970468 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 31970397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 40220057 - 40220128
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40220057 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 40220128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 18036475 - 18036616
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||  |||||||||||||| |||  ||| ||||    
T  18036475 aaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaaag-taaaattaaatgcaaattgcattcaatt 18036572  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | |||||||||||||||||| |||||||||||||||||||||||    
T  18036573 tattctcctttttattttcttcataatttttaaccaatgagaat 18036616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 38942671 - 38942533
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| |||||||||||       |||||||||||        ||| ||||||||||||||  ||  ||| ||||    
T  38942671 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaagttgcattcaatt 38942573  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38942572 tgttctcctttttattttctccataatttttaaccaatga 38942533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 45358106 - 45357964
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||| ||  ||  ||||||||    
T  45358106 aaaatataagcaaaaaaaaccaacttttatgctatttttatgttatttcaaacaaatcatcttttcc-aatgtaaaattaaatacatgttgcatttaatt 45358008  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  45358007 tgttcacctttttattttctccataatttttaaccaatgagaat 45357964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 15311179 - 15311249
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15311179 taaaattaaatgcag-ttgtattcaatttgttctcctttttattttctctataatttttaaccaatgagaat 15311249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 18852224 - 18852295
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18852224 taaaattaaatgcaaattgcattcaatttgttcccctttttattttctccataatttttaaccaatgagaat 18852295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 39026476 - 39026334
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||| |||||       ||| |||||||        ||| ||||||||||||||  ||  ||||||||    
T  39026476 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaataaatcat-attttccaatgtaaaattaaatgcaagttgcatttaatt 39026378  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | |||||||||||||||||||||||||||||||||||| |||||    
T  39026377 tattctcctttttattttctccataatttttaaccaataagaat 39026334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 9127973 - 9128115
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||||||||        ||||||||||||       ||| |||||||||||| | |||  ||| ||||    
T  9127973 aaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatctttttc-aatgtaaaattaaatgtaaattgcattcaatt 9128071  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||  ||||||||||||||||||||||||||||||||||||||    
T  9128072 tatttacctttttattttctccataatttttaaccaatgagaat 9128115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 15285734 - 15285875
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||| |||||| | |||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  15285734 aaaatataagcaaaaaagaccaatttttatgccattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaatt 15285832  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  15285833 tgttctctttttt-ttttctccataatttttaaccaatgagaat 15285875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 617
Target Start/End: Complemental strand, 43656196 - 43656129
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  43656196 taaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatga 43656129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 35941771 - 35941909
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| | |||||||||| |||||||||||       ||||||||||||       ||| ||||||||||| || |||  ||| ||||    
T  35941771 aaaatataagcaaaaaaaatcaacttttatgctattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatacaaattgcattcaatt 35941869  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  35941870 tgttctcttttttattttctccataatttttaatcaatga 35941909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 6848465 - 6848394
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||  ||| |||||||||||||||||||||||||||||||||||||||    
T  6848465 taaaattaaatgcaaattgcattcaatgcgttatcctttttattttctccataatttttaaccaatgagaat 6848394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 4529117 - 4529259
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| |||||||||||       ||| |||||||        ||| |||||||||||||| |||  ||| ||||    
T  4529117 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcat-tttttccaatgtaaaattaaatgcaaattgcattcaatt 4529215  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||| |||||| ||||||||||||||||||||  ||||||||    
T  4529216 tgttcttctttttgttttctccataatttttaacagatgagaat 4529259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 35884212 - 35884279
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| ||| |||||| |||||||||||||| ||||||||||||||||||    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatga 35884279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 578 - 621
Target Start/End: Original strand, 26479768 - 26479811
Alignment:
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  26479768 tgttctcctttttattttctctatagtttttaaccaatgagaat 26479811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 578 - 617
Target Start/End: Original strand, 35189230 - 35189269
Alignment:
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  35189230 tgttctcctctttattttctccataatttttaaccaatga 35189269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 36383929 - 36383996
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| |||||||| ||||||||||||||||||||||  ||| |||||||    
T  36383929 taaaattaaatgcaaattgcattcaatttgttttcctttttattttctccataataattagccaatga 36383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 18913505 - 18913444
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaac 611  Q
    ||||||||||||||  ||  |||||||||||||| |||||||| |||||||| |||||||||    
T  18913505 taaaattaaatgcaagttgcatttaatttgttcttctttttatgttctccatgatttttaac 18913444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 35884151 - 35884192
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattat 518  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  35884151 taaaatataagcaaaaaagaccaacttttatgctattattat 35884192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 24309893 - 24309830
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    ||||||||||||||||||||||||||||  | || ||| |||||||  |||||| |||||||||    
T  24309893 gtaagttgaaaatgtgaatttgcaaagtgagaatcagagataagagaaaaccataacttacaaa 24309830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 24367091 - 24367025
Alignment:
Q  65 gtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctt 131  Q
    |||||||| ||||||| ||| |||||| |||||  |||||| |||| |||||||| |||||||||||    
T  24367091 gtggatgggttccataggtaaatgtttgaagaagagtgcaacaatataaaccctcgacatgaacctt 24367025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 513
Target Start/End: Original strand, 1820327 - 1820364
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactatt 513  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  1820327 ctaaaatataagtaaaaaagacaaacttttatcctatt 1820364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 35189130 - 35189171
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| |||||||||||||||||||  ||||||||||    
T  35189130 aaaatataagcaaaaaagaccaacttttatggtattattatg 35189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 513
Target Start/End: Original strand, 47026406 - 47026443
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactatt 513  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  47026406 ctaaaatataagtaaaaaagacaaacttttatcctatt 47026443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 588
Target Start/End: Complemental strand, 3861851 - 3861812
Alignment:
Q  548 tataaaattaaatgcagattatatttaatttgttctccttt 588  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  3861851 tataaaattaaatgcaaattatatttaattt-ttctccttt 3861812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 581 - 621
Target Start/End: Complemental strand, 44056426 - 44056386
Alignment:
Q  581 tctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  44056426 tctccttcttattttctccataatcattaaccaatgagaat 44056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 7e-29; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 621
Target Start/End: Original strand, 48879316 - 48879459
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    |||||||||||||||||||||||||||||||  ||||||||||       ||| ||||||||       ||| |||||||||||||| |||  ||| |||    
T  48879316 taaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaaaaaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaat 48879414  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48879415 ttgttctcctttttattttctccataatttttaaccaatgagaat 48879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 480 - 621
Target Start/End: Original strand, 35181123 - 35181263
Alignment:
Q  480 aatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttg 579  Q
    |||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||||    
T  35181123 aatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaatttg 35181221  T
Q  580 ttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  35181222 ttctcctttttattttctccataatttttacccaatgagaat 35181263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 45598833 - 45598975
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| || |||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  45598833 aaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 45598931  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45598932 tgttctcctttttattttctccataatttttaaccaatgagaat 45598975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 21654306 - 21654164
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||  ||||| ||||||||||||| |||||||||||       |||||||||| |       ||| |||||||||||||| |||| ||| ||||    
T  21654306 aaaatataaacaaaaaggaccaacttttatgctattattatgttttttcaaacaaatca-ccttttccaatgtaaaattaaatgcaaattacattcaatt 21654208  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  21654207 tgttctccttttcattttctccataatttttaaccaatgagaat 21654164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 621
Target Start/End: Original strand, 23106393 - 23106524
Alignment:
Q  489 aaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatttgttctccttt 588  Q
    ||||||||| ||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||||||||||||||    
T  23106393 aaaaaagactaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatttgttctccttt 23106491  T
Q  589 ttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||    
T  23106492 ttattttctccataatttttaaccaatgagaat 23106524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 43108091 - 43107948
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnn-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    |||||||||| |||||||||||||||||||  ||||||||||        ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  43108091 aaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaat 43107993  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43107992 ttgttctcctttttattttctccataatttttaaccaatgagaat 43107948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 3157365 - 3157507
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||| ||||||||| |||||||||||       ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  3157365 aaaatataagcaaaaaagactaacttttatgctattattatgtattttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcattcaatt 3157463  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  3157464 tgttttcctttttattttctccataatttttaaccaatgagaat 3157507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 18206433 - 18206362
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18206433 taaaattaaatgcaagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaat 18206362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 621
Target Start/End: Original strand, 34808147 - 34808290
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| |||||||||||||||||||  ||||||||||       ||||||||||||       ||  |||||||||||||| |||  ||| |||    
T  34808147 taaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatctttttc-aacgtaaaattaaatgcaaattgcattcaat 34808245  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||| |||||||||||||||||||||||||||||||| |||||    
T  34808246 ttgttcacctttttattttctccataatttttaaccaataagaat 34808290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 40583074 - 40583216
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| ||||||||||||  ||||||||||       |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  40583074 aaaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcat-atttttcaatgtaaaattaaatgcaaattgcattcaatt 40583172  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  40583173 tattctcctttttattttctccataatttttaaccaatgagaat 40583216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 19933240 - 19933102
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||  ||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  19933240 aaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 19933142  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19933141 tgttctcctttttattttctccataatttttaaccaatga 19933102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 19964379 - 19964241
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||  ||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  19964379 aaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 19964281  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19964280 tgttctcctttttattttctccataatttttaaccaatga 19964241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 479 - 621
Target Start/End: Complemental strand, 22111514 - 22111373
Alignment:
Q  479 aaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaattt 578  Q
    ||||||||| |||||| ||||||||||||  ||||||||||       |||||||||||        ||| |||||||||||||| |||  ||| |||||    
T  22111514 aaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcat-atttttcaatgtaaaattaaatgcaaattgcattcaattt 22111416  T
Q  579 gttctcctttttattttctccataatttttaaccaatgagaat 621  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  22111415 attctcctttttattttctccataatttttaaccaatgagaat 22111373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 23731489 - 23731631
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  23731489 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 23731587  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||    
T  23731588 tgttctcctttttattttctccataatttttaatcaacgagaat 23731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 36576347 - 36576485
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||| ||||||||| |||||||||||       ||| ||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  36576347 aaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaataaatcatcttttcc-aatgtaaaattaaatgcaagttgcattcaatt 36576445  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  36576446 tgttctcctttttgttttctccataatttttaaccaatga 36576485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 47383335 - 47383477
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| ||||||||||||  ||||||||||       ||||||||||||       ||| |||||||||||| | |||  ||| ||||    
T  47383335 aaaatataagcaaaaaataccaacttttatgatattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgtaaattgcattcaatt 47383433  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  47383434 tattctcctttttattttctccataatttttaaccaatgagaat 47383477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 40560382 - 40560453
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40560382 taaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaat 40560453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 41815878 - 41815736
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| |||||||||||       ||| |||||||        ||| |||||||||||| |  ||  ||| ||||    
T  41815878 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcat-attttccaatgtaaaattaaatgtaagttgcattcaatt 41815780  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41815779 tgttctcctttttattttctccataatttttaaccaatgagaat 41815736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 32491291 - 32491154
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  32491291 aaaatataagcaaaaaaaaccaacttttatgctatt-ttatgttttttcaaacaaatcatcttttcg-aatgtaaaattaaatgcaagttgcatttaatt 32491194  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  32491193 tgttctcctttttgttttctccataatttttaaccaatga 32491154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 41889100 - 41889242
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| | |||||||||| | |||||||||       ||||||||||||       ||| ||||||| || ||| |||  ||| ||||    
T  41889100 aaaatataagcaaaaaaaatcaacttttatgccattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattcaaagcaaattgcattcaatt 41889198  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41889199 tgttctcctttttattttctccataatttttaaccaatgagaat 41889242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 41890356 - 41890285
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||  |||||||||    
T  41890356 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaattaatgagaat 41890285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 42617671 - 42617742
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  42617671 taaaattaaatgcaaattgcattcaatttgtgctcctttttattttctccataatttttaaccaattagaat 42617742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 621
Target Start/End: Original strand, 9818493 - 9818539
Alignment:
Q  575 atttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9818493 atttgttctcctttttattttctccataatttttaaccaatgagaat 9818539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 621
Target Start/End: Original strand, 10720418 - 10720464
Alignment:
Q  575 atttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10720418 atttgttctcctttttattttctccataatttttaaccaatgagaat 10720464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 7989422 - 7989351
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7989422 taaaattaaatgcaagttgcattcaatttgttatcctttttattttcttcataatttttaaccaatgagaat 7989351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 48938003 - 48937932
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||| || |||  ||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48938003 taaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaat 48937932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 48943029 - 48942958
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||| || |||  ||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48943029 taaaattaaatacaaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaat 48942958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 48883729 - 48883652
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaa 140  Q
    ||||| |||||||||||||| |||||||  ||||||  |||||||| | |||||||||||| ||||||||||||||||    
T  48883729 cagtgtatggattccatatgcagatgttggaagaaccatgcaaaaacagaaaccctctacacgaacctttaatttgaa 48883652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 44600375 - 44600513
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||       ||| ||||||||       | | ||||||||||||||  ||  ||| ||||    
T  44600375 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaataaatcatcttttcc-agtgtaaaattaaatgcaagttgcattcaatt 44600473  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  44600474 tgttctcttttttgttttctccataatttttaaccaatga 44600513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 33153039 - 33153110
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||| |||||||||||||||  ||||||||| |||||    
T  33153039 taaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaat 33153110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 35084215 - 35084144
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||||||||||||||| ||||||||||||||  ||| ||||| |||||    
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaat 35084144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 39348789 - 39348843
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataat 604  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||||||| |||||    
T  39348789 taaaattaaatgcaaattgtattcaatttgttctcctttctattttctcgataat 39348843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 7989475 - 7989434
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  7989475 aaaatataagtaaaaaagaccaacttttatgttattattatg 7989434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 516
Target Start/End: Original strand, 39348718 - 39348756
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattatt 516  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  39348718 aaaatataagcaaaaaagaccaacttttatgctattatt 39348756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 48341617 - 48341575
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattat 518  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||    
T  48341617 ctaaaatataagtaaaaaataccatcttttatgctattattat 48341575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 41890445 - 41890404
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  41890445 aaaatataagcaaaaaagaccaatttttatgctattattatg 41890404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 33635266 - 33635408
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  33635266 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttct-aatgtaaaattaaatgcaagttgcatttaatt 33635364  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33635365 tgttctcctttttattttctccataatttttaaccaatgagaat 33635408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 792582 - 792440
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||       ||| ||||||||       ||| |||||||||||||| |||  ||| ||||    
T  792582 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 792484  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  792483 tgttctcctttttattttctccataatttttaaccaatgagaat 792440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 8784325 - 8784467
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||     
T  8784325 aaaatataagtaaaaaagaccaacttttatgctattattatgttatttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaatg 8784423  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  8784424 tgttctcctttttattttctccataatttttaatcaataagaat 8784467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 5091768 - 5091624
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnn--aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 575  Q
    |||||||||||||||||||||||||||||| | |||||||||         ||||||||||||       ||| |||||||||||||| |||  ||| ||    
T  5091768 aaaatataagtaaaaaagaccaacttttatgccattattatgttttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaa 5091670  T
Q  576 tttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5091669 tttgttctcctttttattttctccataatttttaaccaatgagaat 5091624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 14565528 - 14565457
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14565528 taaaattaaatgcaaattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 14565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 612
Target Start/End: Original strand, 28424204 - 28424337
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||| |||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| ||| |||| ||||    
T  28424204 aaaatttaagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgtattcaatt 28424302  T
Q  578 tgttctcctttttattttctccataatttttaacc 612  Q
    |||||||||||||||||||||||||||||||||||    
T  28424303 tgttctcctttttattttctccataatttttaacc 28424337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 21539687 - 21539829
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||       ||||||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  21539687 aaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcattcaatt 21539785  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  21539786 tgttctcctttttattttctccataatttttacccaatgagaat 21539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 29514245 - 29514107
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  29514245 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttttt-aatgtaaaattaaatgcaaattgcattcaatt 29514147  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  29514146 tgttctcatttttattttctctataatttttaaccaatga 29514107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 43075680 - 43075818
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  43075680 aaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatctattcc-aatgtaaaattaaatgcaaattgcattcaatt 43075778  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  43075779 tgttttcctttttattttctccataatttttaaccaatga 43075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 10478179 - 10478250
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10478179 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 10478250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 29514700 - 29514563
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||| | |||  ||| ||||    
T  29514700 aaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttccc-aatgtaaaattaaatgtaaattgcattcaatt 29514603  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  29514602 tgttgtcctttttattttctccataatttttaaccaatga 29514563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 477 - 621
Target Start/End: Original strand, 28492449 - 28492592
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| ||||||||||||||||||| ||||||||||        |||||||||||        ||| |||||||||||||| |||  ||| ||     
T  28492449 taaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaaattgcattcaac 28492547  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    || ||||||||||||||||||| ||||||||||||||||||||||    
T  28492548 ttattctcctttttattttctctataatttttaaccaatgagaat 28492592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 4033901 - 4033759
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| ||| |||||| |||||||||||       ||||||| ||||       ||| |||||||||||||| |||  ||| ||||    
T  4033901 aaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaaacatctttttc-aatgtaaaattaaatgcaaattgcattcaatt 4033803  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||||||||||||||||||||||||||||||||| ||||||    
T  4033802 tattctcctttttattttctccataatttttaaccaacgagaat 4033759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 35832342 - 35832484
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||  | |||||| |||||||||||       ||||||||||||       |||||||||||||||||| |||  ||| |||     
T  35832342 aaaatataagcaaaaaagacatatttttatgctattattatgttttttcaaacaaatcatcttttcc-aatataaaattaaatgcaaattgcattcaatc 35832440  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  35832441 tgttcacctttttattttctccataatttttaactaatgagaat 35832484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 38549869 - 38549727
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| |||||||||||       ||| ||||||||       ||| ||||||||||||||  ||  ||| ||||    
T  38549869 aaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcatcttttcc-aatgtaaaattaaatgcaagttgcattcaatt 38549771  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  38549770 tgttctcatttttgttttctccataatttttaaccaatgagaat 38549727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 43451506 - 43451573
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||  ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43451506 taaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatga 43451573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 44803899 - 44803970
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||| || |||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44803899 taaaattaaatacaaattgcattcaatttgttctcctatttattttctccataatttttaaccaatgagaat 44803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 617
Target Start/End: Complemental strand, 18834065 - 18833998
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||||||||||  |||||||||||    
T  18834065 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatga 18833998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 577 - 621
Target Start/End: Original strand, 10979197 - 10979241
Alignment:
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  10979197 ttgttctcctttttattttctccataatttttaactaatgagaat 10979241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 4092012 - 4092083
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||| ||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  4092012 taaaattaaatgcaagttgcattcaatttgttctcctttttgttttttccataatttttaaccattgagaat 4092083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 15068736 - 15068807
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||| |||| ||||||||||  ||||||||| |||||    
T  15068736 taaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaat 15068807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 15858836 - 15858795
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  15858836 aaaatataagtaaaaaagaccaaattttatgctattattatg 15858795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 13822925 - 13822854
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||| ||| |||| ||||||||||  ||||||||| |||||    
T  13822925 taaaattaaatgcaaattgcattcaatttgttctcatttctattctctccataatcattaaccaataagaat 13822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 14565600 - 14565559
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| ||||||||| ||||||||| |||||||||||    
T  14565600 aaaatataagcaaaaaagactaacttttatgctattattatg 14565559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 18834138 - 18834097
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| |||||||| |||||||||| |||||||||||    
T  18834138 aaaatataagcaaaaaagatcaacttttattctattattatg 18834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 621
Target Start/End: Original strand, 20914790 - 20914933
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| |||||| |||||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  |||||||    
T  20914790 taaaatataagcaaaaaataccaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaat 20914888  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20914889 ttgttctcctttttattttctccataatttttaaccaatgagaat 20914933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 617
Target Start/End: Complemental strand, 31690847 - 31690709
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||  ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  31690847 aaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 31690749  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31690748 tgttctcctttttattttctccataatttttaaccaatga 31690709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 8146241 - 8146098
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||| |||||||||||||||||||  ||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  8146241 taaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaat 8146143  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  8146142 ttgttctcttttttattttctccataatttttaactaatgagaat 8146098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 477 - 621
Target Start/End: Complemental strand, 8541792 - 8541649
Alignment:
Q  477 taaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||  |||||||||||||||||||  ||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  8541792 taaaatataacaaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattaaat 8541694  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  8541693 ttgttctccattttattttctccataatttttaaccaatgagaat 8541649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 17825354 - 17825283
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaatttgtcctcctttttattttctccataatttttaaccaatgagaat 17825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 42365038 - 42365109
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42365038 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaat 42365109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 13146661 - 13146803
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||  ||||||||||||||||||| |||||||||||       ||||||||||||       ||| |||||||||||| | |||  ||| ||||    
T  13146661 aaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgtaaattgcattcaatt 13146759  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  13146760 tgttctcatttttgttttctccataatttttaaccaatgagaat 13146803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 16286310 - 16286168
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||| ||||||||| | ||| |||||       |||||||| |||       ||| ||||||||||||||  ||  ||||| ||    
T  16286310 aaaatataagtaaaaaagacaaacttttatgcaatttttatgttttttcaaacaaattatctttttc-aatgtaaaattaaatgcaagttgcatttagtt 16286212  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16286211 tgttctcctttttattttctccataatttttaaccaatgagaat 16286168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 24432627 - 24432485
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||||||||| ||||        ||| ||||||||       ||| ||||||||||||||  ||  ||||||||    
T  24432627 aaaatataagcaaaaaaaaccaacttttatactatttttatattttttcaaataaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 24432529  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  24432528 tgttatcctttttattttctccataatttttaaccaatgagaat 24432485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 30086775 - 30086633
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||||||||||||||||||||||||||||   |||||||||       ||||||||||||       ||| ||||||||||| || |||  ||| ||||    
T  30086775 aaaatataagtaaaaaagaccaacttttatgtcattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatacaaattgcattcaatt 30086677  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | |||||||||||||||||||||||||||||| |||||||||||    
T  30086676 tattctcctttttattttctccataatttttagccaatgagaat 30086633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 35462945 - 35462803
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| |||||||||||       ||||||| ||||       ||| |||||||||||||| |||  ||| ||||    
T  35462945 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaaacatctttttc-aatgtaaaattaaatgcaaatttcattcaatt 35462847  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | || ||||||||||||||| |||||||||||||||||||||||    
T  35462846 tattatcctttttattttcttcataatttttaaccaatgagaat 35462803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 12638892 - 12638963
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12638892 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaat 12638963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 37066379 - 37066308
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  37066379 taaaattaaatgcaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaat 37066308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 476 - 621
Target Start/End: Complemental strand, 31317030 - 31316886
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 575  Q
    |||||||||||| |||||||| ||||||||||  |||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||    
T  31317030 ctaaaatataagcaaaaaagatcaacttttatgttatttttatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaagttgcatttaa 31316932  T
Q  576 tttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||    
T  31316931 tctgttcacctttttattttctccataatttttaaccaatgagaat 31316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 570 - 621
Target Start/End: Complemental strand, 25962584 - 25962533
Alignment:
Q  570 atttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25962584 atttaatttgttctactttttattttctccataatttttaaccaatgagaat 25962533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 29695868 - 29695782
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagac 367  Q
    ||||||||||||||||||||||||||||  || | ||||||||||| ||||||| ||||||||| |||| | ||||  |||||||||    
T  29695868 gtaagttgaaaatgtgaatttgcaaagtgaggttgagatataagagataaccataacttacaaacgcatttgaaacgaataagagac 29695782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 344
Target Start/End: Complemental strand, 29687801 - 29687704
Alignment:
Q  247 tatgaacagaattcgacgagtttgtgctgtggccgtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    |||||||||||||| | |||| |||||  |||| |||||||||||||| |||||||||||||  || | |||||| ||||  ||||| ||||||||||    
T  29687801 tatgaacagaattctaggagtgtgtgcattggcggtaagttgaaaatgagaatttgcaaagtgaggttgagatatgagagaaaaccaagacttacaaa 29687704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 2002290 - 2002218
Alignment:
Q  549 ataaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||| |||  ||| ||||||||||||||| |||| ||||||||||  ||||||||| |||||    
T  2002290 ataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaat 2002218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 24439575 - 24439642
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||| ||||||||  ||| |||||||    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatga 24439642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 1812141 - 1812078
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    ||||||||||||||  |||||||||||| |||||| || |||||||  |||||| |||||||||    
T  1812141 gtaagttgaaaatgataatttgcaaagtggggatttgagataagagaaaaccataacttacaaa 1812078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 8143937 - 8144008
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||  | |||  ||| |||||||||| | ||||||||||||||||||  |||||||||||||||    
T  8143937 taaaattaaatataaattgcattcaatttgttctacattttattttctccataatcattaaccaatgagaat 8144008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 32433587 - 32433628
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  32433587 aaaatataagcaaaaaagacaaatttttatactattattatg 32433628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 46580467 - 46580609
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||||||||||||||||||||||| | |||||||||       |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  46580467 aaaatataagtaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcat-attttacaatgtaaaattaaatgcaaattgcattcaatt 46580565  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  46580566 tgttctcctttttattttctccataatttttaatcaatgagaat 46580609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 26641301 - 26641159
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| |||||||||||       ||||||||||||       ||  |||||||||||||| |||  ||| ||||    
T  26641301 aaaatataagcaaaaaacaccaacttttatgctattattatgttttttcaaacaaatcatctttttc-aaggtaaaattaaatgcaaattgcattcaatt 26641203  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26641202 tgttctcctttttattttctccataatttttaaccaatgagaat 26641159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 621
Target Start/End: Complemental strand, 46296268 - 46296124
Alignment:
Q  476 ctaaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaa 575  Q
    |||||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       | | ||||||||||||||  ||  ||||||    
T  46296268 ctaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccga-tgtaaaattaaatgcaagttgcatttaa 46296170  T
Q  576 tttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  46296169 tttgttctcctttttattttctccataatttttaaccaatgagaat 46296124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 28793092 - 28793235
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||| |||||       ||||||||||||       |    |||||||||||||  ||  ||||||||    
T  28793092 aaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttctaatgtaaaaattaaatgcaagttgcatttaatt 28793191  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28793192 tgttctcctttttattttctccataatttttaaccaatgagaat 28793235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 53020113 - 53020256
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnn-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    ||||||||||||||||| |||||||||||| |||||||||||        ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  53020113 aaaatataagtaaaaaataccaacttttatgctattattatgtttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaat 53020211  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  53020212 ttgttctcctttttattttctccataatttttaactaatgagaat 53020256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 23513498 - 23513640
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||| |||||||||||| |||||||||||       ||||||| ||||       ||| |||||||||||||| |||  ||| ||||    
T  23513498 aaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaaacatctttttc-aatgtaaaattaaatgcaaattgcattcaatt 23513596  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  23513597 tgttctcctttttattttctccataatttttacccaatgagaat 23513640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 55400669 - 55400811
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||  |||||||| |||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  55400669 aaaatataagcaaaaaagacttacttttatgctattattatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatt 55400767  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  55400768 tgttcacctttttattttctccataatttttaaccaatgagaat 55400811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 52172128 - 52172057
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52172128 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 52172057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 31126143 - 31126281
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||  ||||||||||||||||||| | |||||||||       |||||||||||        ||| |||||||||||||| |||  ||| ||||    
T  31126143 aaaatataaacaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcat-tttttccaatgtaaaattaaatgcaaattgcattcaatt 31126241  T
Q  578 tgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31126242 tgttctcctttttattttctccataatttttaaccaatga 31126281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 570 - 621
Target Start/End: Complemental strand, 45347811 - 45347760
Alignment:
Q  570 atttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347811 atttaatttgttctcctttttattttctccataatttttaaccaatgagaat 45347760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 49068053 - 49068124
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49068053 taaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaat 49068124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 51255188 - 51255259
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51255188 taaaattaaatgcaagttgcatttaatttgttctcctttttattttctccataatttttaactaatgagaat 51255259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 51426621 - 51426688
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatga 51426688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 52252038 - 52252109
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  52252038 taaaattaaatgcaagttacatttaatttgttctcttttttattttctccataatttttaatcaatgagaat 52252109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 478 - 615
Target Start/End: Original strand, 1335041 - 1335177
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||| ||||||  ||||||||||       ||||||||||||       ||| |||||||||||||| |||  ||| ||||    
T  1335041 aaaatataagcaaaaaagaccaatttttatgttattattatgttttttcaaacaaatcatctttttc-aatgtaaaattaaatgcaaattgcattcaatt 1335139  T
Q  578 tgttctcctttttattttctccataatttttaaccaat 615  Q
    |||||| |||||||||||||||||||||||||||||||    
T  1335140 tgttcttctttttattttctccataatttttaaccaat 1335177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 617
Target Start/End: Original strand, 21654175 - 21654314
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnn-aaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaat 576  Q
    |||||||||| |||||||||||||||||||  ||||||||||        ||||||||||||       ||| |||||||||||||| |||  ||| |||    
T  21654175 aaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaat 21654273  T
Q  577 ttgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  21654274 ttgttctcctttttattttctccataatttttaacaaatga 21654314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Complemental strand, 16739344 - 16739207
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| ||||||||||||||||||| ||||||||||        ||||||||||||       ||| |||||||||||     ||  ||||||||    
T  16739344 aaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatcttttcc-aatgtaaaattaaat-----ttgcatttaatt 16739251  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  16739250 tgttttcctttttattttctccataatttttaaccaatgagaat 16739207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 621
Target Start/End: Original strand, 45781328 - 45781470
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||| ||  ||  ||||||||    
T  45781328 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttcc-aatgtaaaattaaattcaagttgcatttaatt 45781426  T
Q  578 tgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  45781427 tgttctcatttttatcttctccataatttttaaccaatgagaat 45781470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 32322357 - 32322286
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||| ||  ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32322357 taaaattaaatacaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaat 32322286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 37324202 - 37324131
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37324202 taaaattaaatgcaaattgcattcaatttgtttccctttttattttctccataatttttaaccaatgagaat 37324131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 43575959 - 43576026
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatga 617  Q
    ||||||||||||||  ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43575959 taaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatga 43576026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 11015663 - 11015784
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaagacgaaaacaagattcgggagg 162  Q
    |||| ||||||||||||| |||||||||| ||||||    ||||| || ||| ||||||||||||| |||||||| ||||| | || ||||||| |||||    
T  11015663 cagttgatggattccataggtagatgtttgaagaacaagtcaaaactataaatcctctacatgaacttttaatttcaagactagaataagattctggagg 11015762  T
Q  163 cgtaaaattgaggttgagtgaa 184  Q
    | ||||||| ||||| ||||||    
T  11015763 cataaaattaaggttcagtgaa 11015784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 574 - 621
Target Start/End: Original strand, 34022625 - 34022672
Alignment:
Q  574 aatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34022625 aatttgttctcctttttattttctctataatttttaaccaatgagaat 34022672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 47452051 - 47452130
Alignment:
Q  63 cagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacatgaacctttaatttgaaga 142  Q
    ||||||||||||||||||||||||||||| ||||||     |||| || |||||||||||||||||||||||||| ||||    
T  47452051 cagtggatggattccatatgtagatgtttgaagaacaacttaaaagtataaaccctctacatgaacctttaatttcaaga 47452130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 614
Target Start/End: Original strand, 13541208 - 13541343
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    |||||||||| |||||||||||||||||||  ||||||||||        |||||||||||       ||| |||||||||||||| |||  ||| |||     
T  13541208 aaaatataagaaaaaaagaccaacttttatgttattattatgttttttcgaacaaatcatcttttcc-aatgtaaaattaaatgcaaattgcattcaatg 13541306  T
Q  578 tgttctcctttttattttctccataatttttaaccaa 614  Q
    |||| |||||||||||||||| |||||||||||||||    
T  13541307 tgttttcctttttattttctctataatttttaaccaa 13541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 602
Target Start/End: Original strand, 46819980 - 46820103
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatgnnnnnnnaaacaaatcatcnnnnnnnaatataaaattaaatgcagattatatttaatt 577  Q
    ||||||||| ||||||||| |||||||||| ||||| |||||       ||||||||||||       ||| ||||||||||||||  ||  ||||||||    
T  46819980 aaaatataaataaaaaagatcaacttttatgctatttttatgtttttttaaacaaatcatcttttcc-aatgtaaaattaaatgcaagttgcatttaatt 46820078  T
Q  578 tgttctcctttttattttctccata 602  Q
    |||||||||||||||||||||||||    
T  46820079 tgttctcctttttattttctccata 46820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 11006332 - 11006387
Alignment:
Q  289 aaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    |||||| || ||||||||||  |||| ||| |||||||||||||||||||||||||    
T  11006332 aaaatgcgattttgcaaagtgaggatcagagataagagttaaccatgacttacaaa 11006387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 36189124 - 36189053
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||| |||||||||||| | || |||  |||||||||||||||    
T  36189124 taaaattaaatgcaaattgcattcaatttgttcacctttttattttattcacaatcattaaccaatgagaat 36189053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 621
Target Start/End: Original strand, 51309415 - 51309486
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    |||||||||||||| |||  ||| ||||||||| ||||| |||| ||||||||||  ||||||||| |||||    
T  51309415 taaaattaaatgcaaattgcattcaatttgttcccctttctattctctccataatcattaaccaataagaat 51309486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 621
Target Start/End: Original strand, 46303547 - 46303617
Alignment:
Q  551 aaaattaaatgcagattatatttaatttgttctcctttttattttctccataatttttaaccaatgagaat 621  Q
    ||||||||||||| |||  |||||||||||| | |||  |||||||||||||||  ||||||||| |||||    
T  46303547 aaaattaaatgcaaattgcatttaatttgttattcttcctattttctccataatcattaaccaataagaat 46303617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 11024901 - 11024990
Alignment:
Q  283 aagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaatgcatgtaaaacttataagagacatcac 372  Q
    ||||| |||||| || ||||||||||   ||| ||| ||||||| ||||||||||||||||| |||| | |||| ||| |||||| ||||    
T  11024901 aagttcaaaatgcgattttgcaaagttatgatcagagataagagctaaccatgacttacaaacgcatttgaaacgtatgagagacttcac 11024990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 45347857 - 45347816
Alignment:
Q  478 aaaatataagtaaaaaagaccaacttttatactattattatg 519  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  45347857 aaaatataagcaaaaaagatcaacttttatactatttttatg 45347816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 550 - 590
Target Start/End: Original strand, 40936390 - 40936430
Alignment:
Q  550 taaaattaaatgcagattatatttaatttgttctccttttt 590  Q
    |||||||||||||| |||||||||| |||||||| ||||||    
T  40936390 taaaattaaatgcaaattatatttattttgttctacttttt 40936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 12210 - 12168
Alignment:
Q  100 gtgcaaaaatacaaaccctctacatgaacctttaatttgaaga 142  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  12210 gtgcaaaaatataaaccttctacatgaacctttaatttgaaga 12168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 11978 - 11915
Alignment:
Q  281 gtaagttgaaaatgtgaatttgcaaagtcgggattagatataagagttaaccatgacttacaaa 344  Q
    ||||||||||||||||||||||||||||    || ||| |||||||  ||||||||||||||||    
T  11978 gtaagttgaaaatgtgaatttgcaaagtgattatcagagataagagaaaaccatgacttacaaa 11915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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