View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19755_high_66 (Length: 237)
Name: NF19755_high_66
Description: NF19755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19755_high_66 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 565582 - 565354
Alignment:
| Q |
1 |
acgatgacaatgtgagctccttcaattctctagacgagtgtttttcacttattcttacacttgccactgtgaagttcactttgagaacacaaatctgtaa |
100 |
Q |
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| T |
565582 |
acgatgacaatgtgagctccttcaattctctagacgagtgtttttcacttattcttacacttgccactgtgaagttcactttgagaacacaaatctgtaa |
565483 |
T |
|
| Q |
101 |
aggaaaatgacaataaatagaaagattcccaaggaaaagacaataccaactttgttgtgttcataagaaaggaaatgaagtaagcacaaaaataaggggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
565482 |
aggaaaatgacaataaatagaaagattcccaaggaaaagacaataccaactttgttgtgttcataagaaaggaaatgaagtaagcacaaaaataaggggt |
565383 |
T |
|
| Q |
201 |
ttttaaaagacataaagcatgtgatgatg |
229 |
Q |
| |
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||||||||||||||||||||||||||||| |
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|
| T |
565382 |
ttttaaaagacataaagcatgtgatgatg |
565354 |
T |
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