View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19755_low_2 (Length: 777)

Name: NF19755_low_2
Description: NF19755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19755_low_2
NF19755_low_2
[»] chr3 (72 HSPs)
chr3 (19-694)||(51492555-51493230)
chr3 (333-689)||(3902545-3902893)
chr3 (353-689)||(34821082-34821412)
chr3 (333-689)||(50716324-50716683)
chr3 (333-689)||(50796164-50796523)
chr3 (353-684)||(35142164-35142498)
chr3 (353-642)||(3351852-3352135)
chr3 (353-658)||(28873095-28873395)
chr3 (353-658)||(2358392-2358691)
chr3 (333-550)||(52777302-52777518)
chr3 (341-689)||(51258481-51258835)
chr3 (402-658)||(35345679-35345929)
chr3 (353-549)||(43472842-43473038)
chr3 (353-550)||(38977620-38977817)
chr3 (364-689)||(47739673-47739990)
chr3 (353-532)||(501031-501209)
chr3 (403-537)||(46624860-46624994)
chr3 (373-550)||(47123136-47123313)
chr3 (418-550)||(46622667-46622799)
chr3 (353-658)||(47302110-47302408)
chr3 (353-550)||(39149899-39150096)
chr3 (373-550)||(47130502-47130679)
chr3 (353-473)||(33438611-33438731)
chr3 (353-508)||(51540528-51540683)
chr3 (341-542)||(30721690-30721885)
chr3 (350-543)||(49096105-49096299)
chr3 (346-530)||(5127791-5127975)
chr3 (567-689)||(29048628-29048751)
chr3 (438-550)||(3938357-3938469)
chr3 (404-550)||(54229769-54229915)
chr3 (350-550)||(14828790-14828991)
chr3 (436-689)||(40062552-40062806)
chr3 (341-536)||(29048421-29048616)
chr3 (465-689)||(33439383-33439607)
chr3 (426-550)||(4300152-4300276)
chr3 (350-481)||(29035885-29036017)
chr3 (436-550)||(50384347-50384462)
chr3 (402-469)||(33842027-33842094)
chr3 (346-453)||(45712053-45712160)
chr3 (436-550)||(51816387-51816501)
chr3 (402-469)||(8735532-8735599)
chr3 (402-469)||(9087773-9087840)
chr3 (333-487)||(27143351-27143503)
chr3 (353-447)||(3937469-3937563)
chr3 (436-488)||(26464999-26465051)
chr3 (647-688)||(3351790-3351831)
chr3 (572-644)||(45244600-45244671)
chr3 (360-488)||(47769359-47769487)
chr3 (246-316)||(5128037-5128108)
chr3 (650-689)||(47123375-47123414)
chr3 (650-689)||(47130741-47130780)
chr3 (593-689)||(49095946-49096052)
chr3 (580-658)||(500956-501034)
chr3 (647-689)||(8657505-8657547)
chr3 (347-429)||(29035798-29035880)
chr3 (423-477)||(46555500-46555554)
chr3 (418-537)||(47979889-47980010)
chr3 (402-447)||(32025127-32025172)
chr3 (567-651)||(43419906-43419989)
chr3 (402-450)||(45244529-45244577)
chr3 (567-663)||(51540392-51540488)
chr3 (647-689)||(500914-500957)
chr3 (402-469)||(8735325-8735392)
chr3 (402-469)||(9087566-9087633)
chr3 (647-686)||(41486015-41486054)
chr3 (647-689)||(3938574-3938616)
chr3 (647-689)||(4394370-4394412)
chr3 (574-644)||(43471466-43471536)
chr3 (426-487)||(27143291-27143352)
chr3 (569-658)||(28788394-28788483)
chr3 (625-658)||(41300966-41300999)
chr3 (567-608)||(46625029-46625070)
[»] chr7 (52 HSPs)
chr7 (353-689)||(9151886-9152211)
chr7 (346-689)||(1518790-1519145)
chr7 (353-657)||(42925411-42925710)
chr7 (353-655)||(42864874-42865171)
chr7 (333-550)||(36468409-36468624)
chr7 (387-689)||(19818504-19818809)
chr7 (353-656)||(36629295-36629590)
chr7 (353-550)||(36408461-36408658)
chr7 (418-689)||(43737237-43737512)
chr7 (333-549)||(3936180-3936394)
chr7 (333-508)||(28230382-28230555)
chr7 (353-550)||(3304630-3304827)
chr7 (338-549)||(36946165-36946375)
chr7 (333-550)||(24690205-24690421)
chr7 (426-658)||(7115039-7115266)
chr7 (353-542)||(33151298-33151482)
chr7 (353-658)||(19225368-19225667)
chr7 (353-689)||(47202584-47202917)
chr7 (341-537)||(31985402-31985598)
chr7 (341-689)||(6466869-6467221)
chr7 (353-658)||(31643131-31643429)
chr7 (436-542)||(37398771-37398877)
chr7 (353-689)||(8154989-8155329)
chr7 (346-493)||(5278347-5278494)
chr7 (353-550)||(33573915-33574112)
chr7 (353-462)||(24042148-24042257)
chr7 (353-481)||(37518236-37518364)
chr7 (470-689)||(37517992-37518215)
chr7 (451-550)||(26555029-26555128)
chr7 (369-537)||(48776094-48776264)
chr7 (436-550)||(48705871-48705985)
chr7 (437-522)||(39581913-39581998)
chr7 (352-496)||(16983668-16983812)
chr7 (369-482)||(43185888-43186001)
chr7 (357-493)||(48775704-48775840)
chr7 (402-469)||(8214243-8214310)
chr7 (402-461)||(8214462-8214521)
chr7 (256-331)||(37218221-37218296)
chr7 (568-658)||(28230262-28230352)
chr7 (573-644)||(5731063-5731133)
chr7 (333-384)||(6467769-6467819)
chr7 (403-469)||(16278246-16278312)
chr7 (647-689)||(42925365-42925407)
chr7 (246-311)||(43185751-43185817)
chr7 (567-641)||(43186083-43186157)
chr7 (647-684)||(36629594-36629631)
chr7 (397-457)||(5730941-5731001)
chr7 (567-658)||(3304521-3304612)
chr7 (652-687)||(19225327-19225362)
chr7 (625-684)||(36408719-36408777)
chr7 (449-499)||(30861264-30861314)
chr7 (625-658)||(37217502-37217535)
[»] chr8 (49 HSPs)
chr8 (333-689)||(34853400-34853748)
chr8 (353-658)||(8885222-8885522)
chr8 (353-550)||(27927813-27928010)
chr8 (333-689)||(42280627-42280978)
chr8 (358-550)||(9073599-9073791)
chr8 (354-550)||(3094776-3094972)
chr8 (355-658)||(11698086-11698383)
chr8 (333-658)||(14163827-14164144)
chr8 (331-542)||(40392605-40392815)
chr8 (333-550)||(44106295-44106510)
chr8 (350-554)||(17119747-17119951)
chr8 (364-550)||(28916876-28917062)
chr8 (358-550)||(36165709-36165902)
chr8 (353-550)||(31519764-31519961)
chr8 (346-554)||(1076639-1076846)
chr8 (333-658)||(36317862-36318185)
chr8 (397-633)||(28423555-28423785)
chr8 (397-542)||(40328031-40328176)
chr8 (341-531)||(4259528-4259716)
chr8 (402-658)||(36980708-36980958)
chr8 (397-549)||(21004518-21004670)
chr8 (422-543)||(6395243-6395364)
chr8 (349-554)||(1374026-1374231)
chr8 (353-454)||(40994882-40994983)
chr8 (333-458)||(16310671-16310794)
chr8 (353-458)||(37248648-37248753)
chr8 (402-469)||(33472210-33472277)
chr8 (418-536)||(34645532-34645650)
chr8 (357-469)||(10833468-10833580)
chr8 (402-537)||(7981653-7981788)
chr8 (402-469)||(9845325-9845392)
chr8 (402-469)||(33472417-33472484)
chr8 (404-537)||(8621522-8621657)
chr8 (571-643)||(9845394-9845465)
chr8 (436-500)||(39093681-39093745)
chr8 (402-457)||(7982517-7982572)
chr8 (406-469)||(31234471-31234534)
chr8 (246-311)||(1076508-1076575)
chr8 (431-486)||(10840693-10840748)
chr8 (403-450)||(24627714-24627761)
chr8 (402-469)||(24627921-24627988)
chr8 (402-469)||(41530814-41530881)
chr8 (647-689)||(40995058-40995100)
chr8 (647-689)||(44106606-44106648)
chr8 (641-689)||(21004693-21004741)
chr8 (402-457)||(7965935-7965990)
chr8 (188-238)||(21594401-21594451)
chr8 (647-689)||(27927678-27927720)
chr8 (188-261)||(17120077-17120149)
[»] chr1 (46 HSPs)
chr1 (280-658)||(52744613-52744984)
chr1 (333-683)||(34006331-34006674)
chr1 (353-651)||(45046627-45046919)
chr1 (372-652)||(41584441-41584715)
chr1 (353-550)||(49677573-49677770)
chr1 (372-550)||(45567762-45567940)
chr1 (333-554)||(28866498-28866718)
chr1 (353-689)||(42546057-42546398)
chr1 (353-658)||(40907704-40908002)
chr1 (335-652)||(24472604-24472913)
chr1 (353-550)||(7011300-7011497)
chr1 (353-550)||(23442828-23443025)
chr1 (353-550)||(33611282-33611479)
chr1 (353-658)||(18583314-18583613)
chr1 (421-689)||(38885371-38885639)
chr1 (353-658)||(49786358-49786657)
chr1 (333-550)||(26723360-26723576)
chr1 (305-550)||(27794871-27795117)
chr1 (353-537)||(40650560-40650744)
chr1 (353-689)||(44572834-44573165)
chr1 (353-531)||(15069732-15069910)
chr1 (353-550)||(17000468-17000666)
chr1 (333-550)||(3561207-3561423)
chr1 (354-550)||(34162593-34162790)
chr1 (403-689)||(6223491-6223765)
chr1 (333-476)||(32817557-32817698)
chr1 (402-542)||(25563294-25563434)
chr1 (352-550)||(42928973-42929171)
chr1 (436-554)||(45879977-45880095)
chr1 (436-550)||(5284191-5284306)
chr1 (402-469)||(800545-800612)
chr1 (439-486)||(38158996-38159043)
chr1 (402-469)||(43318933-43319000)
chr1 (647-689)||(45567637-45567679)
chr1 (350-487)||(890601-890738)
chr1 (645-689)||(7011600-7011644)
chr1 (397-469)||(9445839-9445911)
chr1 (357-462)||(9446055-9446160)
chr1 (586-658)||(41584351-41584423)
chr1 (402-469)||(8364147-8364213)
chr1 (402-469)||(43319144-43319211)
chr1 (647-689)||(15069608-15069650)
chr1 (592-658)||(33611180-33611246)
chr1 (647-689)||(44938025-44938067)
chr1 (353-426)||(32542483-32542556)
chr1 (593-658)||(42929205-42929270)
[»] chr4 (69 HSPs)
chr4 (353-658)||(25491165-25491464)
chr4 (333-689)||(25752183-25752531)
chr4 (333-658)||(40703744-40704061)
chr4 (353-689)||(17932866-17933206)
chr4 (333-537)||(2505916-2506118)
chr4 (333-550)||(41322964-41323180)
chr4 (353-550)||(48318936-48319133)
chr4 (333-658)||(19835600-19835917)
chr4 (333-537)||(31582307-31582509)
chr4 (431-658)||(54631262-54631483)
chr4 (362-537)||(53893910-53894085)
chr4 (353-550)||(6003545-6003742)
chr4 (353-554)||(34972962-34973163)
chr4 (353-643)||(7931755-7932038)
chr4 (353-658)||(38536268-38536568)
chr4 (348-550)||(8106486-8106689)
chr4 (353-550)||(6228685-6228882)
chr4 (353-550)||(32441908-32442105)
chr4 (426-658)||(47456771-47457002)
chr4 (387-658)||(25538748-25539014)
chr4 (402-550)||(52089332-52089480)
chr4 (341-536)||(7863527-7863722)
chr4 (377-543)||(27741992-27742159)
chr4 (333-537)||(37222040-37222242)
chr4 (369-550)||(41412970-41413151)
chr4 (333-550)||(46440144-46440361)
chr4 (333-542)||(55052498-55052706)
chr4 (423-548)||(49397180-49397305)
chr4 (450-689)||(29822775-29823018)
chr4 (346-537)||(14474097-14474287)
chr4 (356-499)||(27879649-27879792)
chr4 (404-485)||(47784138-47784218)
chr4 (402-481)||(47873957-47874036)
chr4 (341-481)||(3703190-3703330)
chr4 (567-658)||(5803198-5803290)
chr4 (436-499)||(1788175-1788238)
chr4 (571-689)||(4936463-4936579)
chr4 (426-537)||(20078719-20078830)
chr4 (402-469)||(25140459-25140526)
chr4 (436-531)||(55838883-55838978)
chr4 (625-689)||(31582166-31582233)
chr4 (402-469)||(25140875-25140942)
chr4 (426-489)||(42497809-42497872)
chr4 (403-454)||(49002822-49002873)
chr4 (436-531)||(55774705-55774800)
chr4 (647-689)||(47874113-47874155)
chr4 (436-550)||(48095739-48095853)
chr4 (402-500)||(372066-372166)
chr4 (403-500)||(37769982-37770079)
chr4 (402-459)||(42660338-42660395)
chr4 (466-658)||(49001325-49001516)
chr4 (402-462)||(25140675-25140735)
chr4 (568-689)||(42497668-42497795)
chr4 (567-658)||(3703025-3703116)
chr4 (483-554)||(38417020-38417091)
chr4 (647-686)||(54631222-54631261)
chr4 (406-537)||(55138033-55138164)
chr4 (647-689)||(3702978-3703020)
chr4 (426-500)||(46381090-46381164)
chr4 (440-485)||(48629497-48629542)
chr4 (645-689)||(27741834-27741878)
chr4 (402-469)||(27181474-27181540)
chr4 (436-487)||(51515736-51515787)
chr4 (579-658)||(53893796-53893875)
chr4 (647-689)||(18050916-18050958)
chr4 (645-683)||(27879890-27879928)
chr4 (350-488)||(32600935-32601073)
chr4 (475-536)||(4936614-4936675)
chr4 (625-658)||(32601202-32601235)
[»] chr5 (70 HSPs)
chr5 (333-684)||(37183527-37183869)
chr5 (333-673)||(32841725-32842059)
chr5 (353-658)||(6156783-6157082)
chr5 (333-689)||(31221067-31221426)
chr5 (333-688)||(39524810-39525150)
chr5 (353-550)||(38871723-38871920)
chr5 (353-689)||(33487662-33488004)
chr5 (341-554)||(13908588-13908801)
chr5 (333-549)||(20891647-20891861)
chr5 (353-689)||(15799277-15799616)
chr5 (353-658)||(31928895-31929193)
chr5 (333-550)||(38692655-38692870)
chr5 (353-689)||(7884245-7884586)
chr5 (403-651)||(14111969-14112209)
chr5 (341-550)||(26095132-26095341)
chr5 (353-550)||(28083250-28083447)
chr5 (333-550)||(4064591-4064807)
chr5 (387-550)||(12464991-12465154)
chr5 (348-542)||(24203564-24203758)
chr5 (353-550)||(15957801-15957998)
chr5 (347-550)||(40613547-40613750)
chr5 (353-542)||(29862664-29862854)
chr5 (353-544)||(38372361-38372544)
chr5 (340-544)||(12847482-12847686)
chr5 (402-550)||(23269438-23269586)
chr5 (435-550)||(26898675-26898790)
chr5 (331-689)||(27212740-27213086)
chr5 (352-550)||(27158136-27158333)
chr5 (364-689)||(40619715-40620048)
chr5 (402-550)||(6800799-6800947)
chr5 (402-689)||(26093547-26093850)
chr5 (352-499)||(41639416-41639563)
chr5 (353-444)||(25747077-25747168)
chr5 (436-542)||(33901094-33901200)
chr5 (347-651)||(41253346-41253650)
chr5 (402-462)||(8739148-8739208)
chr5 (431-550)||(26622242-26622359)
chr5 (402-469)||(8973562-8973629)
chr5 (402-469)||(16429383-16429450)
chr5 (402-469)||(28445162-28445229)
chr5 (402-460)||(8738947-8739005)
chr5 (436-550)||(11186048-11186161)
chr5 (567-689)||(11185915-11186048)
chr5 (595-674)||(19027337-19027416)
chr5 (484-658)||(26190092-26190260)
chr5 (402-469)||(34530316-34530383)
chr5 (353-455)||(26190265-26190367)
chr5 (449-550)||(3435403-3435504)
chr5 (182-331)||(27157942-27158090)
chr5 (346-489)||(4027910-4028054)
chr5 (418-550)||(21070483-21070614)
chr5 (397-469)||(27494106-27494178)
chr5 (339-442)||(1350290-1350393)
chr5 (402-469)||(27493902-27493969)
chr5 (402-469)||(28445358-28445425)
chr5 (418-469)||(34530150-34530201)
chr5 (402-469)||(38641035-38641102)
chr5 (585-686)||(33331419-33331518)
chr5 (397-462)||(16429168-16429233)
chr5 (625-689)||(38871989-38872054)
chr5 (404-488)||(5535378-5535461)
chr5 (625-687)||(3435567-3435632)
chr5 (471-537)||(19027226-19027297)
chr5 (567-658)||(20891872-20891963)
chr5 (572-643)||(28445284-28445354)
chr5 (576-651)||(43387937-43388011)
chr5 (648-689)||(4027714-4027755)
chr5 (431-536)||(18514932-18515037)
chr5 (652-689)||(29862909-29862946)
chr5 (652-689)||(38692511-38692548)
[»] chr2 (53 HSPs)
chr2 (333-689)||(33452183-33452525)
chr2 (333-554)||(41203049-41203269)
chr2 (353-550)||(32187736-32187933)
chr2 (353-683)||(41510159-41510492)
chr2 (353-658)||(42894467-42894766)
chr2 (353-550)||(15994980-15995177)
chr2 (341-688)||(34517179-34517535)
chr2 (347-550)||(5507503-5507706)
chr2 (333-658)||(41854668-41854981)
chr2 (359-544)||(16750302-16750485)
chr2 (369-658)||(25217539-25217824)
chr2 (333-500)||(44465644-44465809)
chr2 (333-542)||(39447234-39447441)
chr2 (353-550)||(36875075-36875272)
chr2 (333-537)||(19109895-19110097)
chr2 (418-550)||(30763804-30763936)
chr2 (421-689)||(38308566-38308829)
chr2 (333-650)||(35251001-35251313)
chr2 (347-536)||(8388735-8388924)
chr2 (426-550)||(42478906-42479030)
chr2 (353-508)||(36948854-36949009)
chr2 (402-493)||(45153715-45153806)
chr2 (353-508)||(17474708-17474863)
chr2 (402-689)||(33440244-33440524)
chr2 (436-550)||(45293813-45293927)
chr2 (451-689)||(38065300-38065543)
chr2 (436-550)||(26228239-26228353)
chr2 (404-536)||(37773696-37773829)
chr2 (625-689)||(8388998-8389062)
chr2 (567-651)||(11457250-11457334)
chr2 (402-469)||(17766777-17766844)
chr2 (402-469)||(34519485-34519552)
chr2 (333-457)||(38066633-38066756)
chr2 (624-689)||(2764832-2764897)
chr2 (426-522)||(27900509-27900605)
chr2 (402-469)||(9847160-9847227)
chr2 (647-689)||(32187605-32187647)
chr2 (431-488)||(34817269-34817326)
chr2 (567-689)||(44465464-44465596)
chr2 (418-469)||(9847368-9847419)
chr2 (647-686)||(42894766-42894805)
chr2 (647-689)||(17474522-17474564)
chr2 (647-689)||(25217497-25217539)
chr2 (647-689)||(41854626-41854668)
chr2 (490-658)||(27670723-27670885)
chr2 (175-238)||(38308315-38308378)
chr2 (180-262)||(8388525-8388606)
chr2 (404-537)||(13704692-13704826)
chr2 (647-689)||(16750168-16750210)
chr2 (572-658)||(17133028-17133114)
chr2 (251-309)||(17638350-17638408)
chr2 (647-689)||(34817488-34817530)
chr2 (625-658)||(16750209-16750242)
[»] chr6 (44 HSPs)
chr6 (353-658)||(4508072-4508371)
chr6 (333-658)||(2812992-2813311)
chr6 (353-550)||(3717154-3717352)
chr6 (333-537)||(13800912-13801114)
chr6 (353-542)||(14587440-14587629)
chr6 (333-651)||(17264482-17264791)
chr6 (403-651)||(21514808-21515050)
chr6 (333-689)||(2539523-2539881)
chr6 (353-550)||(23406886-23407084)
chr6 (364-550)||(5699666-5699853)
chr6 (358-550)||(29519374-29519566)
chr6 (341-542)||(24604241-24604442)
chr6 (333-544)||(29289503-29289714)
chr6 (331-527)||(7734221-7734416)
chr6 (353-529)||(1945423-1945599)
chr6 (402-550)||(34528579-34528727)
chr6 (333-550)||(5638934-5639149)
chr6 (436-537)||(16450387-16450488)
chr6 (402-537)||(9905253-9905389)
chr6 (418-519)||(32044537-32044638)
chr6 (436-499)||(4893314-4893377)
chr6 (436-554)||(14037833-14037948)
chr6 (402-487)||(236933-237018)
chr6 (402-469)||(17501005-17501072)
chr6 (567-659)||(237096-237188)
chr6 (567-689)||(237096-237229)
chr6 (436-499)||(1439164-1439227)
chr6 (411-542)||(10310311-10310442)
chr6 (436-537)||(3365838-3365939)
chr6 (426-537)||(6704012-6704122)
chr6 (418-469)||(17501236-17501287)
chr6 (567-689)||(4655592-4655722)
chr6 (647-692)||(29289421-29289466)
chr6 (625-674)||(35191597-35191646)
chr6 (567-643)||(3365957-3366033)
chr6 (594-658)||(9905388-9905452)
chr6 (653-689)||(17264808-17264844)
chr6 (594-694)||(5699923-5700033)
chr6 (567-658)||(21981476-21981567)
chr6 (647-689)||(4508031-4508073)
chr6 (569-651)||(16450518-16450600)
chr6 (652-689)||(23407131-23407168)
chr6 (648-689)||(29519665-29519706)
chr6 (513-550)||(33413358-33413395)
[»] scaffold0508 (1 HSPs)
scaffold0508 (333-658)||(3163-3482)
[»] scaffold0137 (1 HSPs)
scaffold0137 (331-689)||(9228-9586)
[»] scaffold0010 (1 HSPs)
scaffold0010 (402-550)||(140624-140772)
[»] scaffold0027 (2 HSPs)
scaffold0027 (364-550)||(141836-142021)
scaffold0027 (655-689)||(141721-141755)
[»] scaffold0564 (1 HSPs)
scaffold0564 (404-537)||(4512-4645)
[»] scaffold0182 (1 HSPs)
scaffold0182 (402-462)||(23241-23301)
[»] scaffold0018 (1 HSPs)
scaffold0018 (567-689)||(174090-174222)
[»] scaffold0091 (1 HSPs)
scaffold0091 (436-522)||(1963-2049)
[»] scaffold0006 (2 HSPs)
scaffold0006 (402-454)||(59499-59551)
scaffold0006 (402-454)||(59938-59990)
[»] scaffold0016 (1 HSPs)
scaffold0016 (402-469)||(205759-205826)
[»] scaffold0014 (1 HSPs)
scaffold0014 (418-521)||(100814-100917)
[»] scaffold0770 (1 HSPs)
scaffold0770 (654-687)||(4185-4218)
[»] scaffold0466 (1 HSPs)
scaffold0466 (404-485)||(8835-8915)
[»] scaffold0029 (1 HSPs)
scaffold0029 (654-687)||(102489-102522)


Alignment Details
Target: chr3 (Bit Score: 506; Significance: 0; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 19 - 694
Target Start/End: Original strand, 51492555 - 51493230
Alignment:
Q  19 tgagaatggtaaatgttggctgggttgcatgatgaagtaagggttgggcaatgttgacaaactagaggctgattgggttaaaatcacacgacccaaatag 118  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51492555 tgagaatggtaaatgttggctgggttgcatgatgaagtt-gggttgggcaatgttgacaaactagaggctgattgggttaaaatcacacgacccaaatag 51492653  T
Q  119 aaatgtgggtgtctgaatagagaccgttactttttccatcatatgtcatattaatacgctttgtaaatctttcaaaaatgcctttgaacaatttggattt 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  51492654 aaatgtgggtgtctgaatagagactgttactttttccatcatatgtcatactaatacgctttgtaaatctttcaaaaatgcctttgaaaaattcggattt 51492753  T
Q  219 taaaatccaaattcatgttttccctgcgttatagggtgaaaa-aattagttcttcctcaattcgaattttataagccgaaaacttcaaaaaatatggcgc 317  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||    
T  51492754 taaaatccgaattcatgttttccctgcgttatagggggaaaaaaattagttcttcctcaattcggattttataatccgaaaacttcaaaaaatatggtgc 51492853  T
Q  318 tttacttgatttttgaacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatga 417  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  51492854 tttacttgatttttaaacaccctttttccaacggagaaacagttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatga 51492953  T
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagt-aaaaaattgggtttttggcctac 516  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  51492954 atagttattttatggacaatattaatcttcctaactctcatccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctac 51493053  T
Q  517 ttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatccca 616  Q
    |||||| |||||||||||||| |||||| ||||||||||||         ||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  51493054 ttgatcagattgctccgaaacttccccagaaaattagagag-agaaaaaatcaaggatcaagacttccgtagaaagaacttcttaagggactccatccca 51493152  T
Q  617 caaaatataaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgcgttgg 694  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  51493153 caaaatataaaatttcatcgtttagacctatttttaatttttcatatactcacaaaaatccaaaaaaatttgtgttgg 51493230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 333 - 689
Target Start/End: Complemental strand, 3902893 - 3902545
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| ||  |||||||||||    
T  3902893 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgatcattttatgg 3902796  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||  |||||||||| |||||| |||||||  |  ||||||||||||||||||     
T  3902795 acaatattaatcttcataactctcatccttctgctttgggtcattgttacatgttcttagtcaaaaatcgggttttcagattacttgatcggattgctcg 3902696  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| | |||| ||||| ||| |          ||||||| || ||| ||| ||||| | | |||||| | ||||||  ||| ||||||  |||||||     
T  3902695 gaaacttgcccagaaaatcagaaa------aaattcaaggaccatgacacccttagaaggaatttcttacgggactccgcccctcaaaatccaaaattca 3902602  T
Q  633 atcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  3902601 atcgtttagatccatttttaatttttcatattctcagaaaaatccgaaaaaatttgc 3902545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 353 - 689
Target Start/End: Complemental strand, 34821412 - 34821082
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||     
T  34821412 aaaatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttcctaaa 34821313  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    | |||||||| ||||||||||||||||||  |||||||||| |||||  |||||||  | |||||||||||||| |||| ||||| |||||| ||||| |    
T  34821312 tttcatccttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttccccagaaaatca 34821213  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||| | ||||| |||||||||| | || |||  ||| ||||||  |||||||||||||||||||| ||||||     
T  34821212 gaaa------aaattcaaggaccatgactctcatagaagggacttcttacgggagtccgcccctcaaaatccaaaattccatcgtttagacccatttttc 34821119  T
Q  653 atttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  34821118 atttttcatattctcggaaaaatccgaaaaaatttgc 34821082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 333 - 689
Target Start/End: Original strand, 50716324 - 50716683
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || |||||| |||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| |||||||||||||||| ||    
T  50716324 aacaccctttttcaa--ggtaaaacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttaggg 50716421  T
Q  433 acaatattaatcttcctaactctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    ||||||||||||||||||||||||||| ||  | |||||||||||||||| ||||||||||| |||||| ||||||| || |||||||||||||||||||    
T  50716422 acaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 50716521  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
    |||||| |||||| ||||| ||| |          ||||||| || ||||||  |||||  ||||||||| | || |||  ||| ||||||  |||||||    
T  50716522 cgaaacttccccagaaaatcagaaa------aaactcaaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattc 50716615  T
Q  632 catcgtttagaccta----------tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| ||||||||||          ||||||||||||||||| |||||||||||||||||||||||||    
T  50716616 catcctttagacctatttttcattttttttaatttttcatattctcagaaaaatccgaaaaaatttgc 50716683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 333 - 689
Target Start/End: Complemental strand, 50796523 - 50796164
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || |||||| |||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| |||||||||||||||| ||    
T  50796523 aacaccctttttcaa--ggtaaaacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttaggg 50796426  T
Q  433 acaatattaatcttcctaactctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    ||||||||||||||||||||||||||| ||  | |||||||||||||||| ||||||||||| |||||| ||||||| || |||||||||||||||||||    
T  50796425 acaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 50796326  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
    |||||| |||||| ||||| ||| |          ||||||| || ||||||  |||||  ||||||||| | || |||  ||| ||||||  |||||||    
T  50796325 cgaaacttccccagaaaatcagaaa------aaactcaaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattc 50796232  T
Q  632 catcgtttagaccta----------tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| ||||||||||          ||||||||||||||||| |||||||||||||||||||||||||    
T  50796231 catcctttagacctatttttcattttttttaatttttcatattctcagaaaaatccgaaaaaatttgc 50796164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 353 - 684
Target Start/End: Original strand, 35142164 - 35142498
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||  ||||||||  ||||||||  |||| ||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  35142164 aaaacagttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaac 35142263  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| || |||||||||||||||  |||||||||| ||||| |||||||| || ||||||||||||||||||||||||| | |||| ||||| |    
T  35142264 tctcatccttctgctttgggtcattgttatctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaac-ttcccagaaaatca 35142362  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt- 651  Q
    || |          ||||||| || ||||||||||||| |||||||||| | | ||||  |||  |||||  |||||||||||||||||||| ||||||     
T  35142363 gaaa------aaattcaaggaccatgactcccgtagaagggacttcttacggggctccgcccctaaaaatccaaaattccatcgtttagacccatttttc 35142456  T
Q  652 ---------aatttttcatatactcagaaaaatccgaaaaaa 684  Q
             |||||||||||| ||||||||||||||||||||    
T  35142457 atttttttaaatttttcatattctcagaaaaatccgaaaaaa 35142498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 353 - 642
Target Start/End: Complemental strand, 3352135 - 3351852
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||| ||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  3352135 aaaacagttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 3352036  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||| ||| ||||||||||||||||||   |||||||||||||||| |||||||  | ||||||||||||||||||||||||| |||| | ||||| |    
T  3352035 tctcattcttctgttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccctagaaaatca 3351936  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttaga 642  Q
    || |          ||| |||  | ||||||||||||| |||||||||| | ||||||  ||| |||||| |||||||||||||||||||    
T  3351935 gaaa------aaattcagggacaatgactcccgtagaagggacttcttatgggactccgcccctcaaaatctaaaattccatcgtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 28873095 - 28873395
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||  |||||||||||| ||||||||||||||||| ||||    
T  28873095 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaac 28873194  T
Q  453 tctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatt 551  Q
    |||||| |||  | |||||||||| ||||| ||||||||||| |||||| ||||||| || ||||||||||||||||||||||||| |||||| ||||||    
T  28873195 tctcattcttccgcttttgggtcactgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccagaaaatt 28873294  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||| |          ||||||| || ||||||| |||||  ||||||||| | ||||||  ||| ||||||  |||||||||||||||||| | ||||||    
T  28873295 agaaa------aaattcaaggaacatgactcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagatccattttt 28873388  T
Q  652 aattttt 658  Q
     ||||||    
T  28873389 cattttt 28873395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 2358691 - 2358392
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  |||| |||  |||| ||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  2358691 aaaatagttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaac 2358592  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| |||||||||||||||||   | |||||||| |||||| |||||||||| ||||||||||| ||||||| ||||| |||||||||||| |    
T  2358591 tcttatccttttgttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgatcgaattgctctgaaacttccccaaaaaatca 2358492  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||| ||||| |||||||||| | |||| |  ||| |||||| ||||||||||| ||||||||| ||||||     
T  2358491 gaaa------aaattcaaggaccatgactcccctagaagggacttcttacgggactacgcccctcaaaatctaaaattccattgtttagacccatttttc 2358398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 333 - 550
Target Start/End: Original strand, 52777302 - 52777518
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    |||||||||||| ||||| |||| ||||||||||| ||||||  ||| ||||  ||||||||  |||| ||||||||||| ||| |||| ||||||| ||    
T  52777302 aacacccttttttcaaggtaaaa-cagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttaggg 52777400  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||| ||  |||||||||| |||||| ||||||| || |||||||||||||||||||     
T  52777401 acaatattaatcttcttaactcttatccttttgttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctct 52777500  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||| ||||||||||||    
T  52777501 gaaacttccccaaaaaat 52777518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 341 - 689
Target Start/End: Original strand, 51258481 - 51258835
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgga-caatat 439  Q
    |||| ||||||||||||| || | ||| ||||||||||| ||||  ||||||||   ||| ||||||| ||| ||| |||||||||||| ||| ||||||    
T  51258481 tttttcaagggaaaaacaatttgaattatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatat 51258580  T
Q  440 taatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacat 539  Q
    |||||||| |||||||||||||| ||||||| ||||||||||  |||||||||| |||||| | ||||| || | ||||||||||||||||||||||| |    
T  51258581 taatcttcataactctcatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctccgaaactt 51258680  T
Q  540 ccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgttt 639  Q
     |||| ||||| ||| |          |||||||||| ||||||||||||| |||||||||| | ||||||  ||| ||||||  |||||| ||||||||    
T  51258681 tcccagaaaatcagaaa------aaattcaaggatcatgactcccgtagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgttt 51258774  T
Q  640 agacctatttt-----------taatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||| |||||            |||||||||||| |||||||||||||||||||||||||    
T  51258775 agacccattttccatttttttaaaatttttcatattctcagaaaaatccgaaaaaatttgc 51258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 402 - 658
Target Start/End: Complemental strand, 35345929 - 35345679
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  35345929 catgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaatt 35345830  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttctta 601  Q
    ||||||| ||  || ||||||||||||||||||||| |||||| ||||| ||| ||         ||||| |||||||||| ||||||| |||||||| |    
T  35345829 gggttttcgggttaattgatcggattgctccgaaacttccccagaaaatcaga-ag-----aaaatcaagtatcaagactctcgtagaagggacttctaa 35345736  T
Q  602 agagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
     | ||||||  ||| ||||||  ||||||||| |||||| ||| |||||| ||||||    
T  35345735 cgggactccgcccctcaaaatccaaaattccaccgtttaaacccatttttcattttt 35345679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 353 - 549
Target Start/End: Complemental strand, 43473038 - 43472842
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||| ||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  43473038 aaaatagttcgaattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaac 43472939  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaa 549  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||||| ||| ||||| |||||||||||    
T  43472938 tcttatccttttgttttgggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttccccaaaaaa 43472842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 38977817 - 38977620
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||  ||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  38977817 aaaacagttcaaattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaac 38977718  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| ||||||||||||||||||  ||| |||||| |||||  | ||||| |  |||||||||||||||||||| |||| |||||| |||||    
T  38977717 tctcatccttctgttttgggtcattgttacctgtccttagttaaaaaccgagttttcgagctacttgatcggattgctccaaaacttccccagaaaat 38977620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 364 - 689
Target Start/End: Complemental strand, 47739990 - 47739673
Alignment:
Q  364 gattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctta 463  Q
    |||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||  |||||||||| | ||||||||||||||||| ||||||||||||||     
T  47739990 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttc 47739891  T
Q  464 tgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnn 563  Q
    |||||| ||||||| |||  || | ||||| |||||||||||||| || |||||||||||||||||||| |||| |||||| ||||||||| |           
T  47739890 tgtttt-ggtcattattacctggttttagttaaaaattgggttttcgggctacttgatcggattgctccaaaacttccccagaaaattagaaa------a 47739798  T
Q  564 nnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatat 663  Q
       ||||| | |  ||||||| |||||  ||||||||  | ||||||  ||| ||||||  |||||||| | ||||||||| ||||||||||||||||||    
T  47739797 aattcaagaaccgtgactcccatagaagagacttctttggggactccgcccctcaaaattcaaaattccgt-gtttagacccatttttaatttttcatat 47739699  T
Q  664 actcagaaaaatccgaaaaaatttgc 689  Q
     |||||||||||||||||||| ||||    
T  47739698 tctcagaaaaatccgaaaaaaattgc 47739673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 353 - 532
Target Start/End: Complemental strand, 501209 - 501031
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||| ||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| |    
T  501209 aaaacagttcg-attatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagc 501111  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||| ||||||||||||||||||  |||| ||| | ||||||   ||||| || ||||||||||||||||||||    
T  501110 tctcatccttctgttttgggtcattgttacatgtttttattcaaaaatcatgttttcgggctacttgatcggattgctcc 501031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 403 - 537
Target Start/End: Original strand, 46624860 - 46624994
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattg 502  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||      
T  46624860 atgtttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaatct 46624959  T
Q  503 ggtttttggcctacttgatcggattgctccgaaac 537  Q
      ||||||| ||||||||||| |||||||||||||    
T  46624960 aatttttggactacttgatcgaattgctccgaaac 46624994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 373 - 550
Target Start/End: Original strand, 47123136 - 47123313
Alignment:
Q  373 atccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttggg 472  Q
    ||||||| ||||  ||||||||  |||| ||||||||||| ||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  473 tcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
     ||||||||  |||||||||| |||||  |  |||| || ||||||||||||||||||||||||| | |||| |||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgcccagaaaat 47123313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 418 - 550
Target Start/End: Complemental strand, 46622799 - 46622667
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctact 517  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||| |||||| || |||| || |||||    
T  46622799 atagtcattttagggacaatattaatcttccttactctcattcttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactact 46622700  T
Q  518 tgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||||||||||||| | |||| |||||    
T  46622699 tgatcggattgctccgaaactttcccagaaaat 46622667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 47302110 - 47302408
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||| ||||||| ||||||||||||| ||| ||||    
T  47302110 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta-ggacaatattaatattc-taac 47302207  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac-atccccaaaaaatt 551  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| | ||||| || |||||||||||||||| || |||||  |||| |||||||     
T  47302208 tcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactttcccaaaaaaatc 47302307  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||| |          |||||||||| ||||||| ||||| |||||||||| | |||||   ||| ||||||  |||||||||| ||||||||| ||||||    
T  47302308 agaaa------aaattcaaggatcatgactcccatagaagggacttcttacgggactctgcccctcaaaatccaaaattccattgtttagacccattttt 47302401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 39149899 - 39150096
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||||||| || ||||||||||| | ||  ||||||||   ||| ||||||||||| ||   |||||||||||  |||||||||||| ||||||||    
T  39149899 aaaacagttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaac 39149998  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| |||||||||||| |||||  |||||||||| |||||  ||||||| || ||||||| ||| ||||||||||||| |||||| |||||    
T  39149999 tctcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttccccagaaaat 39150096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 373 - 550
Target Start/End: Original strand, 47130502 - 47130679
Alignment:
Q  373 atccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttggg 472  Q
    ||||||| ||||  ||||||||  |||| ||||||||||| ||| | | |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  473 tcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
     ||||||||  |||||||||| |||||  |  |||| || ||||||||||||||||||||||||| | |||| |||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctccgaaacttgcccagaaaat 47130679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 473
Target Start/End: Original strand, 33438611 - 33438731
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  33438611 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaac 33438710  T
Q  453 tctcatccttatgttttgggt 473  Q
    |||||||||| ||||||||||    
T  33438711 tctcatccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 353 - 508
Target Start/End: Complemental strand, 51540683 - 51540528
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| |||| |||  ||||||||  |||| |||||||||||  || |||||||||||| ||||||||||||||||||||||    
T  51540683 aaaacagttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaac 51540584  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttt 508  Q
    |||||||||| |  |||||||||||||||   ||||||||| |||||| |||||||    
T  51540583 tctcatccttctcctttgggtcattgttacacgttcttagtcaaaaatcgggtttt 51540528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 341 - 542
Target Start/End: Complemental strand, 30721885 - 30721690
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||||||||| ||||| |||| ||||||||||| ||||  ||||||||  |||| |||||||||||         |||||||| ||||||||||    
T  30721885 tttttcaagggaaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaactc------tcattttagggacaatatt 30721792  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatc 540  Q
    ||||||||||||||| |||||| ||||||||||||||| ||   ||| ||||| |||||||||||||| |  ||||||||||||||||||||||||| ||    
T  30721791 aatcttcctaactcttatccttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaacttc 30721692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 350 - 543
Target Start/End: Complemental strand, 49096299 - 49096105
Alignment:
Q  350 ggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgga-caatattaatcttcc 448  Q
    |||||||||||| | ||| ||||||| ||| ||||  ||||||||   ||| ||||||||||| ||  |||||||||||| ||| |||||| ||||||||    
T  49096299 ggaaaaacagtttgaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcc 49096200  T
Q  449 taactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatcccc 543  Q
    |||||||||||||| ||||||| ||||||||||  ||||||| || |||||| | ||||| || |||||||||||||||||||| |||| |||||    
T  49096199 taactctcatccttctgttttgagtcattgttacctgttcttcgtcaaaaatcgagttttcgggctacttgatcggattgctccaaaacttcccc 49096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 346 - 530
Target Start/End: Complemental strand, 5127975 - 5127791
Alignment:
Q  346 caagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatct 445  Q
    ||||||||||||||||| | || ||||||| ||||||||  |||| |||   ||| ||||||||||| ||| |||  |||||||||||||||||||||||    
T  5127975 caagggaaaaacagttcagtttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatct 5127876  T
Q  446 tcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    || || ||||||||| | ||||||| ||||||||||||||||||| || ||||||  |||||| || ||||||||| | ||||||    
T  5127875 tcatagctctcatccatttgttttgcgtcattgttagttgttcttggtcaaaaatctggttttcggactacttgattgaattgct 5127791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 567 - 689
Target Start/End: Original strand, 29048628 - 29048751
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatatact 666  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||  ||| ||||||  |||||||||||||||||||| |||||  ||||||||||| ||    
T  29048628 tcaaggatcaagactcccgtagaaaggacttattacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttctatttttcatattct 29048727  T
Q  667 ca-gaaaaatccgaaaaaatttgc 689  Q
    || |||||||||||||||||||||    
T  29048728 caggaaaaatccgaaaaaatttgc 29048751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 438 - 550
Target Start/End: Original strand, 3938357 - 3938469
Alignment:
Q  438 attaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    |||||||||||||||||| |||||| ||||||||||||||||||  |||||||||| ||||||  |||||| ||  |||||||||||||||||| |||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  538 atccccaaaaaat 550  Q
     ||||||||||||    
T  3938457 ttccccaaaaaat 3938469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 404 - 550
Target Start/End: Complemental strand, 54229915 - 54229769
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgg 503  Q
    ||||||||| |||||||  || |||| |||| |||||||||||||| |||| |||| ||||||| | ||||||||||||||||| ||||| ||||||| |    
T  54229915 tgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgcatcattatgttctaggtcattgttagttgttattagtcaaaaattcg 54229816  T
Q  504 gtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||    |||||||||| |||||||| ||||| ||||||||||||    
T  54229815 gttttcttgctacttgatcagattgctctgaaacttccccaaaaaat 54229769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 350 - 550
Target Start/End: Complemental strand, 14828991 - 14828790
Alignment:
Q  350 ggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcct 449  Q
    ||||||| |||| ||||| ||||||||||| | || || | ||||  ||||  |||||| ||| ||| ||| | |||||| ||| ||||||||||||| |    
T  14828991 ggaaaaaaagtttggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcat 14828892  T
Q  450 aactctcatccttatgttttgggtcattgttagttgttcttagt-aaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaa 548  Q
    ||| ||||||| | ||||||||||| |||||||||||||||||| |||||||  | |||| ||  |||||||| ||||||||||||||| | |||| |||    
T  14828891 aaccctcatccatctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgattggattgctccgaaactttcccataaa 14828792  T
Q  549 at 550  Q
    ||    
T  14828791 at 14828790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 436 - 689
Target Start/End: Original strand, 40062552 - 40062806
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    ||||||||||||||||||||  ||||| |||||| ||||||| ||||||||||||||| ||||||  |||||| || |||||||||| |||||| |||||    
T  40062552 atattaatcttcctaactctggtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaa 40062651  T
Q  536 acatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatc 635  Q
    |  |||| | ||||| || ||          |||||||||||||||| ||||||| |||||||||| |  |||   || | |||||| ||||||||||||    
T  40062652 atttccctagaaaatcag-ga----aaaacatcaaggatcaagactctcgtagaagggacttcttacggtactttgtctctcaaaatctaaaattccatc 40062746  T
Q  636 gtttagacctatttttaattt------ttcatatactcagaaaaatccgaaaaaatttgc 689  Q
     ||||||||| | ||||||||      ||||||| |||| |||||||||| |||||||||    
T  40062747 atttagacctgtatttaattttttttcttcatattctcataaaaatccgagaaaatttgc 40062806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 341 - 536
Target Start/End: Original strand, 29048421 - 29048616
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||||||||||| ||| |||| ||||||| ||| | ||  | ||||||  || |  |||||||||| ||||  ||| |||||| ||| ||||||    
T  29048421 tttttcaagggaaaaacaattcagattatataatcggaactatatcaacacaaattctgaatatgtttgtaacatgac-agttattttaaggataatatt 29048519  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagta-aaaaattgggtttttggcctacttgatcggattgctccgaaa 536  Q
    ||||||| ||||||| ||||||||||||| |||||||||||  ||||||||||| ||||||  ||||||  | |||||||||||||||||| |||||    
T  29048520 aatcttcataactcttatccttatgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggattgcttcgaaa 29048616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 465 - 689
Target Start/End: Original strand, 33439383 - 33439607
Alignment:
Q  465 gttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnn 564  Q
    ||||||||||||||||| || |||||||| ||||||  | |||| || ||||||||||||||||||||||||| | |||| ||||| ||| |            
T  33439383 gttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaa--aaaaaa 33439480  T
Q  565 nntcaag--gatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcata 662  Q
      |||||  | | | ||||||| || || |||||| ||| |  |||||  ||||||||||  |||||||||||||||||||| ||||||||||||| |||    
T  33439481 attcaagtggttaatgactcccataaaagggacttgttacggaactccgccccacaaaatccaaaattccatcgtttagacccatttttaattttttata 33439580  T
Q  663 tactcagaaaaatccgaaaaaatttgc 689  Q
    | |||| ||||||||||||||||||||    
T  33439581 ttctcaaaaaaatccgaaaaaatttgc 33439607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 426 - 550
Target Start/End: Complemental strand, 4300276 - 4300152
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcgga 525  Q
    |||| ||||||||||||||||||||||| |||||||| ||| || |||||||||||| |||||||||||||||||   |||||||| ||  |||||  ||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattaga 4300177  T
Q  526 ttgctccgaaacatccccaaaaaat 550  Q
    ||||||  |||| |||||| |||||    
T  4300176 ttgctctaaaacttccccagaaaat 4300152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 350 - 481
Target Start/End: Original strand, 29035885 - 29036017
Alignment:
Q  350 ggaaaaacagttcggattttataatccgaattgtact-agcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcc 448  Q
    |||||||||||||| ||| ||||||| ||| |||  | | ||||||  |||| ||||||||||| ||| ||| |||||||| |||| |||||| ||||||    
T  29035885 ggaaaaacagttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcc 29035984  T
Q  449 taactctcatccttatgttttgggtcattgtta 481  Q
    ||||||||||| ||||||||| |||||||||||    
T  29035985 taactctcatcattatgttttaggtcattgtta 29036017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 550
Target Start/End: Complemental strand, 50384462 - 50384347
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattg-ggtttttggcctacttgatcggattgctccga 534  Q
    |||||||||||  ||||||| |||||| ||||||  ||||||||||||| |||||||||||||| ||  ||||| || | |||||||| |||||||||||    
T  50384462 atattaatctttataactctaatccttctgttttatgtcattgttagttattcttagtaaaaaaatgcagttttcggtccacttgatcagattgctccga 50384363  T
Q  535 aacatccccaaaaaat 550  Q
    ||| ||||||||||||    
T  50384362 aacttccccaaaaaat 50384347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 33842094 - 33842027
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||| ||||||    
T  33842094 catgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatccttgtgtttt 33842027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 346 - 453
Target Start/End: Complemental strand, 45712160 - 45712053
Alignment:
Q  346 caagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatct 445  Q
    |||||||||||||||||||||| ||||||| ||| ||||  ||||||||   | ||||||||||||| ||| ||| ||||||||  ||| ||||||||||    
T  45712160 caagggaaaaacagttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatct 45712061  T
Q  446 tcctaact 453  Q
    ||||||||    
T  45712060 tcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 550
Target Start/End: Original strand, 51816387 - 51816501
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||| ||||| ||||||| ||||||| |||||||||||||||||| ||||  |||||   |||||  |  ||||||||| ||||||||||||    
T  51816387 atattaatcttcataactatcatcctcatgttttaggtcattgttagttgttcctagtcgaaaatatagttttctggttacttgatcagattgctccgaa 51816486  T
Q  536 acatccccaaaaaat 550  Q
    |  ||||||||||||    
T  51816487 atttccccaaaaaat 51816501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 8735532 - 8735599
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  8735532 catgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 8735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 9087773 - 9087840
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  9087773 catgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 9087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 487
Target Start/End: Complemental strand, 27143503 - 27143351
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  |||||||||||||  ||| ||||||| ||  ||||  ||||||||  || | ||||||||||| ||| ||||| |||||| ||    
T  27143503 aacaccctttttcaa--ggaaaaacagttcaaattatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaagg 27143406  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgtt 487  Q
    | ||||||||  ||||||||  |||||||| | |||||| |||||||||||||||    
T  27143405 ataatattaagattcctaaccatcatccttctattttggatcattgttagttgtt 27143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 353 - 447
Target Start/End: Original strand, 3937469 - 3937563
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttc 447  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||  |||||||||||||||||||||||||    
T  3937469 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 436 - 488
Target Start/End: Original strand, 26464999 - 26465051
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttc 488  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  26464999 atattaatcttcttaactctcattcttatgttttaggtcattgttagttgttc 26465051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 647 - 688
Target Start/End: Complemental strand, 3351831 - 3351790
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttg 688  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  3351831 tttttaatttttcatattctcagaaaaatccgaaaaaatttg 3351790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 644
Target Start/End: Original strand, 45244600 - 45244671
Alignment:
Q  572 gatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc 644  Q
    ||||||||||||| |||||||||||||||| ||||||||  ||| ||||||  ||||||||||| ||||||||    
T  45244600 gatcaagactcccttagaaaggacttcttacgagactcc-gccctcaaaatccaaaattccatcatttagacc 45244671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 488
Target Start/End: Original strand, 47769359 - 47769487
Alignment:
Q  360 ttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatc 459  Q
    |||||||| || |||| ||||||||  ||| ||||  || | ||||||||||| ||| |||||||||||| | |  |||||||||||  ||||| |||||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  460 cttatgttttgggtcattgttagttgttc 488  Q
     || | |||| ||||||||||||||||||    
T  47769459 attctattttaggtcattgttagttgttc 47769487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 5128108 - 5128037
Alignment:
Q  246 gttatagggtgaaaaaatt-agttcttcctcaattcgaattttataagccgaaaacttcaaaaaatatggcg 316  Q
    ||||||||||||||||| | ||||||||  ||||||| |||||||||  |||||||||||||||||| ||||    
T  5128108 gttatagggtgaaaaaaatgagttcttcaccaattcggattttataattcgaaaacttcaaaaaataaggcg 5128037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 689
Target Start/End: Original strand, 47123375 - 47123414
Alignment:
Q  650 ttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  47123375 ttaatttttcatattctcagaaaaatccgaaaaaatttgc 47123414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 689
Target Start/End: Original strand, 47130741 - 47130780
Alignment:
Q  650 ttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  47130741 ttaatttttcatattctcagaaaaatccgaaaaaatttgc 47130780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 593 - 689
Target Start/End: Complemental strand, 49096052 - 49095946
Alignment:
Q  593 gacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttt----------taatttttcatatactcagaaaaatccgaaaa 682  Q
    |||||||| || |||||| |||| ||||||  |||||||||||||| ||||| |||||          ||||||||||||| ||||||||||||||||||    
T  49096052 gacttcttgagggactccgtccctcaaaatccaaaattccatcgttaagacccattttccattttttttaatttttcatattctcagaaaaatccgaaaa 49095953  T
Q  683 aatttgc 689  Q
    |||||||    
T  49095952 aatttgc 49095946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 658
Target Start/End: Complemental strand, 501034 - 500956
Alignment:
Q  580 ctcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||| ||||| |||||||||| |  |||||  ||| ||||||  |||||||||||||||||||| |||||||||||||    
T  501034 ctcccatagaagggacttcttacggcactccgcccctcaaaatccaaaattccatcgtttagaccaatttttaattttt 500956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 8657505 - 8657547
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  8657505 ttttaaatttttcatattctcagaaaaatccgaaaaaatttgc 8657547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 429
Target Start/End: Original strand, 29035798 - 29035880
Alignment:
Q  347 aagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcatttta 429  Q
    ||||||||||||||||||||| |||||| |||||||||  |  |||||  || | ||||||||||| ||| ||||||||||||    
T  29035798 aagggaaaaacagttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 46555500 - 46555554
Alignment:
Q  423 cattttatggacaatattaatcttcctaactctcatccttatgttttgggtcatt 477  Q
    ||||||| |||| |||||||||||| |||||||||||||| |||||| |||||||    
T  46555500 cattttaaggaccatattaatcttcataactctcatccttctgttttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 418 - 537
Target Start/End: Complemental strand, 47980010 - 47979889
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatcctta--tgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggccta 515  Q
    |||||||||||| |||||||||||||||| |||||||||||   ||    |||| ||||||||||||||||| ||| | ||||| |   |||  || |||    
T  47980010 atagtcattttaaggacaatattaatctttctaactctcatggatagtcattttaggtcattgttagttgttattaatcaaaaaatcaatttccgggcta 47979911  T
Q  516 cttgatcggattgctccgaaac 537  Q
    ||||||| ||||||||||||||    
T  47979910 cttgatcagattgctccgaaac 47979889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 32025127 - 32025172
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttc 447  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  32025127 catgtttgtaatataaatagtcgttttaaggacaatattaatcttc 32025172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 567 - 651
Target Start/End: Complemental strand, 43419989 - 43419906
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||||||||||| |||||| |||| || |||||||| |||| |||||| | ||||||  |||||||||||||||| ||| ||||||    
T  43419989 tcaaggatcaaaactcccatagagag-acttcttacgagattccatcactcaaaatccaaaattccatcgtttatacccattttt 43419906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 45244529 - 45244577
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttccta 450  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||||||    
T  45244529 catgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 567 - 663
Target Start/End: Complemental strand, 51540488 - 51540392
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatat 663  Q
    ||||||| || ||||||| ||||| |||||||| | | || ||   ||| ||||||  |||| ||||||||||||||| ||||||||||||||||||    
T  51540488 tcaaggaccatgactcccttagaagggacttctcatgggattctgcccctcaaaatccaaaactccatcgtttagacccatttttaatttttcatat 51540392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 500957 - 500914
Alignment:
Q  647 tttttaatttttcatatactcag-aaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||    
T  500957 tttttaatttttcatattctcagaaaaaatccgaaaaaatttgc 500914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 8735325 - 8735392
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||| ||| ||| |||||||||||| ||||||||||||| |||||| |  |||||||| ||||||    
T  8735325 catgtttataacatggatagtcattttaaggacaatattaatattcctagcattcatccttgtgtttt 8735392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 9087566 - 9087633
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||| ||| ||| |||||||||||| ||||||||||||| |||||| |  |||||||| ||||||    
T  9087566 catgtttataacatggatagtcattttaaggacaatattaatattcctagcattcatccttgtgtttt 9087633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 686
Target Start/End: Complemental strand, 41486054 - 41486015
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatt 686  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  41486054 tttttaattcttcatattctcagaaaaatccgaaaaaatt 41486015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 3938574 - 3938616
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||    
T  3938574 tttttaattattcatattctcagaaaaatctgaaaaaatttgc 3938616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 4394370 - 4394412
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| |||||||||||| ||||||||||||| |||||||||||    
T  4394370 ttttcaatttttcatattctcagaaaaatccaaaaaaatttgc 4394412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 574 - 644
Target Start/End: Complemental strand, 43471536 - 43471466
Alignment:
Q  574 tcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc 644  Q
    ||||||||| ||||||| | ||||||||  |||||||| ||| ||||||  |||||| |||||||||||||    
T  43471536 tcaagactctcgtagaaggaacttcttacaagactccacccctcaaaatccaaaatttcatcgtttagacc 43471466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 487
Target Start/End: Complemental strand, 27143352 - 27143291
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgtt 487  Q
    |||| ||||||||||||  ||||||||  |||||||| | |||||| |||||||||||||||    
T  27143352 tttaaggacaatattaagattcctaaccatcatccttctattttggatcattgttagttgtt 27143291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 28788394 - 28788483
Alignment:
Q  569 aaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||||| |||| || |||  |||||||| | ||||||||||   ||||| ||||||| ||||||||||||  |||||| ||||||    
T  28788394 aaggatcaagattcccctaaaaaaaacttcttacgggactccatcctttaaaatctaaaatttcatcgtttagactcatttttcattttt 28788483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 658
Target Start/End: Original strand, 41300966 - 41300999
Alignment:
Q  625 aaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||||||||||||||||||||| ||||||    
T  41300966 aaaattccatcgtttagacctatttttcattttt 41300999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 608
Target Start/End: Original strand, 46625029 - 46625070
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagact 608  Q
    |||| ||||||||||||||||||| |||||| ||||||||||    
T  46625029 tcaaagatcaagactcccgtagaagggactttttaagagact 46625070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 3e-75; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 9151886 - 9152211
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||| | |||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  9151886 aaaacagtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 9151985  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| || ||||  |    
T  9151986 tctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttccacagaaaaaaa 9152085  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
     |            ||||||| || ||||||| ||||| |||||||||| | ||||||  ||| ||||||  |||||||||||||||||||| |||||||    
T  9152086 aa-----------atcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttta 9152174  T
Q  653 atttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||| |||||||||||| || |||||||||    
T  9152175 atttttcatattctcagaaaaatctgagaaaatttgc 9152211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 346 - 689
Target Start/End: Original strand, 1518790 - 1519145
Alignment:
Q  346 caagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatct 445  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||  ||| ||||||||||||||||||||||||    
T  1518790 caagggaaaaacagttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatct 1518889  T
Q  446 tcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaa 545  Q
    || |||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||||||| | || |     
T  1518890 tcttaactctcatccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctccgaaactttcctag 1518989  T
Q  546 aaaattagagagnnnnnnnnn-tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc 644  Q
    ||||  ||| ||          ||||||||||||| |||||||||| ||||||| || | ||||||   || |||||| ||||||||||||||||||| |    
T  1518990 aaaaacagaaagaaaaaaaaaatcaaggatcaagattcccgtagaagggacttcctatgtgactccgctcctcaaaatctaaaattccatcgtttagatc 1519089  T
Q  645 tatttt-----------taatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
     |||||           ||||||||||||| |||||||||||||||||||||||||    
T  1519090 catttttaatttttttttaatttttcatattctcagaaaaatccgaaaaaatttgc 1519145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 353 - 657
Target Start/End: Complemental strand, 42925710 - 42925411
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||||| |||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  42925710 aaaacagttcggattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 42925611  T
Q  453 tctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatt 551  Q
    ||||||||||  | |||||| ||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||| | |||| |||||     
T  42925610 tctcatccttccgtttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctccgaaacttacccagaaaatc 42925511  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||| |          ||||||| || ||||||| ||||| |||||||||| | ||||||  ||| ||||||  |||||||||||||||||||| ||||||    
T  42925510 agaaa------caattcaaggaccatgactcccttagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 42925417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 353 - 655
Target Start/End: Complemental strand, 42865171 - 42864874
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||| |||||| ||||||||||| ||||  ||||||||  ||||  |||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  42865171 aaaacagtccggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 42865072  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| |||||||||||||||| |  ||||||| || ||||||  |||||| || ||||||||||||||||||| |||||||||||| |||||||    
T  42865071 tctcatccttctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatccccagaaaatta 42864972  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaag-gacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    || |          ||||||| || ||||||| ||||||| ||||||||| | ||||||  ||| ||||||  ||||||| |||||||||||| ||||||    
T  42864971 gaaa------caattcaaggaccatgactcccttagaaagagacttcttatgggactccgcccctcaaaatccaaaattcaatcgtttagacccattttt 42864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 36468624 - 36468409
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||| | ||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| |     
T  36468624 aacaccctttttcaa--ggtaaaacagtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagga 36468527  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  36468526 acaatattaatcttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctcc 36468427  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||| |||||| |||||    
T  36468426 gaaacttccccagaaaat 36468409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 387 - 689
Target Start/End: Original strand, 19818504 - 19818809
Alignment:
Q  387 agcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgt 486  Q
    ||||||||  |||| |||| |||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||    
T  19818504 agcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgt 19818603  T
Q  487 tcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgt 586  Q
    |||| ||  ||||| |||||||||| ||||||||||||||||||||||||| | |||| ||||| ||| |          ||||||| || |||||||||    
T  19818604 tcttggtcgaaaatcgggtttttggactacttgatcggattgctccgaaactttcccagaaaatcagaaa------aaattcaaggaccatgactcccgt 19818697  T
Q  587 agaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaa----------tttttcatatactcagaaaaatc 676  Q
    |||| |||||||||| | ||||||| ||| | ||||  ||||||||||||||||||||||||||| |          |||||||||| ||||||||||||    
T  19818698 agaagggacttcttacgggactccacccctc-aaatccaaaattccatcgtttagacctatttttcatttttaattttttttcatattctcagaaaaatc 19818796  T
Q  677 cgaaaaaatttgc 689  Q
    |||||||||||||    
T  19818797 cgaaaaaatttgc 19818809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 353 - 656
Target Start/End: Original strand, 36629295 - 36629590
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||| ||||   ||| ||||||||| | |||  | ||||||||| ||| ||||||||||||||||||    
T  36629295 aaaacagttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatg--tcgtcattttagggagaatattaatcttcctaac 36629392  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| |||||||| ||| |||||  || ||||||| |||||| ||||||| || ||||||||||||||||||||||||| |||||||||||| |    
T  36629393 tctcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttccccaaaaaatca 36629492  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||||||||| |||||||||| | ||||||||||  ||||||  |||||||||||||||||||  |||||||    
T  36629493 gaaa------aaattcaaggaccatgactcccgtagaagggacttcttacgggactccatccttcaaaatccaaaattccatcgtttagactcattttta 36629586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 36408461 - 36408658
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||| ||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| ||||| |||||| ||||||||||||||||| ||||    
T  36408461 aaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaac 36408560  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||| | ||| ||||||||||||||||||  |||||||||| ||||||| |||||| || ||||||||||||||||||||||||| || |||||||||    
T  36408561 tctctttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaacttctccaaaaaat 36408658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 418 - 689
Target Start/End: Original strand, 43737237 - 43737512
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctact 517  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| |||||  ||||||| || |||||    
T  43737237 atagtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctact 43737336  T
Q  518 tgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccac 617  Q
    |||||||||||||||||||  | |||| ||||| ||| |          ||||||| || ||||||| ||||| | |||||||  | ||||||  ||| |    
T  43737337 tgatcggattgctccgaaattttcccagaaaatcagaaa------aaattcaaggaccatgactcccttagaaggaacttcttgtgggactccgcccctc 43737430  T
Q  618 aaaatataaaattccatcgtttagacc----------tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||| |||||||||||||||||||||          | ||||||||||||||||| |||||||||||||||||||||||||    
T  43737431 aaaatctaaaattccatcgtttagacccatttttcattttttttaatttttcatattctcagaaaaatccgaaaaaatttgc 43737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 333 - 549
Target Start/End: Original strand, 3936180 - 3936394
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || |||||||| || ||| ||||||||||| |||| |||||||||   ||| ||||||||||| ||| ||| |||||||| ||    
T  3936180 aacaccctttttcaa--ggtaaaacagtccgaattatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataatcattttaggg 3936277  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||  | |||||||| |||||| || |||| || || |||||||||||||||||    
T  3936278 acaatattaatcttcctaactctcatccttctattttgggtcattgttacctattcttagtcaaaaatcggattttcggactgcttgatcggattgctcc 3936377  T
Q  533 gaaacatccccaaaaaa 549  Q
    ||||| |||||| ||||    
T  3936378 gaaacttccccagaaaa 3936394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 28230555 - 28230382
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||||||    
T  28230555 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgg 28230458  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttt 508  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||| |||| | |||||||    
T  28230457 acaatattaatcttcctaactctcatccttctgttttgggtcattgttgcatgttcttagtcaaaattcgggtttt 28230382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 3304827 - 3304630
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||  ||||||| ||||||||||||||||||||||    
T  3304827 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaac 3304728  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| ||| || ||||||||||||||||||  |||||||||| |||||| ||||| | || ||||||||||||||||||| ||||| |||| |||||||    
T  3304727 tcttatcattttgttttgggtcattgttacctgttcttagtcaaaaatcgggttctcgggctacttgatcggattgctctgaaacttcccaaaaaaat 3304630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 338 - 549
Target Start/End: Complemental strand, 36946375 - 36946165
Alignment:
Q  338 cctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaat 437  Q
    ||||||| ||||||||||||| |||||||| ||||| ||||| ||||  ||||||||  || |  |||||||||| ||||||| |||||||| | |||||    
T  36946375 ccttttttcaagggaaaaacaattcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaag-acaat 36946277  T
Q  438 attaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |  |||||| ||  |||||||||| |||||| ||||||    
T  36946276 attaagcttcctaactctcatccttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaac 36946177  T
Q  538 atccccaaaaaa 549  Q
     |||||| ||||    
T  36946176 ttccccagaaaa 36946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 24690421 - 24690205
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| ||||||||||||| | ||||| ||||||| ||| ||||  |||| |||   ||| ||||||||||| ||| || ||||||||||||    
T  24690421 aacaccctttttc-aagggaaaaacagat-ggattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatgg 24690324  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggttttt-ggcctacttgatcggattgctc 531  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||   ||||||||| || ||| || ||||| || |||||||||||||||||||    
T  24690323 acaatattaatctacctaactctcatccttttgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctc 24690224  T
Q  532 cgaaacatccccaaaaaat 550  Q
    |||||| || ||| |||||    
T  24690223 cgaaacttctccataaaat 24690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 426 - 658
Target Start/End: Complemental strand, 7115266 - 7115039
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcgga 525  Q
    |||||||||||||||||||||  |||||||||||||| | |||| ||||||||||||||||||||||| |||||| | ||||| || ||||||||||| |    
T  7115266 tttatggacaatattaatcttgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgta 7115167  T
Q  526 ttgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatata 625  Q
    |||||| ||||| ||| || ||||| ||| |          |||||||||||||||||| ||||| |||||||||| | |||||| |||| ||||||  |    
T  7115166 ttgctctgaaacttcctcagaaaatcagaaa-----aaaaatcaaggatcaagactcccttagaagggacttcttacgggactccttccctcaaaatcca 7115072  T
Q  626 aaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||| ||||||||| |||||| ||||||    
T  7115071 aaattccattgtttagacccattttttattttt 7115039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 353 - 542
Target Start/End: Original strand, 33151298 - 33151482
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||||| |||| ||||  ||||||||  |||| ||||||||||| |||||||||     || ||||||||||||||||||||||    
T  33151298 aaaacagttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt-----tagggacaatattaatcttcctaac 33151392  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccc 542  Q
    |||||||||| | ||||||||||||||||  |||||||||| ||||||||||||||  | |||||||||||||||  |||||||| ||||    
T  33151393 tctcatccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggattattccgaaacttccc 33151482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 19225667 - 19225368
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||| |||||||| ||||||| |||  |||  ||||||||  |||| ||||||||||| ||| ||| ||||||||||||  |||| ||||||||||||    
T  19225667 aaaacaattcggattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaac 19225568  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| ||||||||||||||||||    |||||||| ||||||  |||||| || ||| ||||||||||||||||||||| |||||| ||||| |    
T  19225567 tctcatccttctgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttccccagaaaatca 19225468  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||| ||||| | ||||||||   ||||||  ||| ||||||  |||||||||||||||||| | ||||||     
T  19225467 gaaa------aaattcaaggaacatgactcccatagaaggaacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagatccatttttc 19225374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 47202584 - 47202917
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||| | ||||| ||||||||||||||||||||||    
T  47202584 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaac 47202683  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| ||||||||||||       | ||||||||| |||||| ||||||| || ||||||||| |||||||||  |||| |||||||||||| |    
T  47202684 tcttatccttttgttttgggtca-------tcgttcttagtcaaaaatcgggttttcgggctacttgattggattgctcttaaacttccccaaaaaatca 47202776  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc-------- 644  Q
    || |          ||||||| || ||||||| ||||| |||||||||||| ||||||  ||| ||||||  |||||||||| |||||||||            
T  47202777 gaaa------aaattcaaggaccatgactcccatagaagggacttcttaagggactccgcccctcaaaatccaaaattccattgtttagacccatttttc 47202870  T
Q  645 --tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
      ||||||||||| ||||||| |||| ||||||| ||||||||||||    
T  47202871 attatttttaattattcatattctcataaaaatctgaaaaaatttgc 47202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 341 - 537
Target Start/End: Complemental strand, 31985598 - 31985402
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||||  |||||||||||||| |||||| |||| ||||  | ||||||   ||| ||| ||| ||| |||||||||||||||||||||||||||    
T  31985598 tttttcaagggggaaacagttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatatt 31985499  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    |||||| |||||||||||| || ||||||||||||||||||   ||||||||| ||||||  ||||||||| |||||||||| ||||| ||| ||||    
T  31985498 aatctttctaactctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaac 31985402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 341 - 689
Target Start/End: Complemental strand, 6467221 - 6466869
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||||||||||| ||| |||| ||||||||||| | ||  | |||||   |||| ||||||||||||||| ||||| |||||| || |||||||    
T  6467221 tttttcaagggaaaaacaattcagattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatatt 6467122  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatc 540  Q
    ||| |||||||||||| ||||| | |||| |||||||||||| |||||||||| ||||||| ||| ||  | |||||||||||||||| || ||||  ||    
T  6467121 aattttcctaactctcttccttctattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttc 6467022  T
Q  541 cccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgttta 640  Q
    || | ||||| || ||          |||||||||||||||||  ||| ||| |||||||| | ||||||  ||| |||||| ||||||| |||||||||    
T  6467021 cctagaaaatcag-ga-ataaaaaaatcaaggatcaagactcctatag-aagtacttcttatgggactccgcccctcaaaatctaaaatttcatcgttta 6466925  T
Q  641 gacc-------tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||       ||||||| ||||||||||| ||||||||||| | |||||||||||    
T  6466924 gacccattttttattttttatttttcatattctcagaaaaattcaaaaaaatttgc 6466869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 31643131 - 31643429
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||| ||| || |  |||| |||  |||| ||| ||| ||| ||| ||||  |||||| ||||||||||||||||||||||    
T  31643131 aaaatagttcggattatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaac 31643230  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| ||| ||| || ||||||||||||||||||| ||||| ||| |||||||| |    
T  31643231 tcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcggg-tttcggactacttgatcggattgctctgaaacttccgcaaaaaatca 31643329  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||| ||||| | |||||||| | ||||||| ||| ||||||  ||||||||||  |||||||| ||||||     
T  31643330 gaaa------aaattcaaggaccatgactcccttagaaggaacttcttatgggactccacccctcaaaatccaaaattccattatttagacccatttttc 31643423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 436 - 542
Target Start/End: Complemental strand, 37398877 - 37398771
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||||||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  536 acatccc 542  Q
    || ||||    
T  37398777 acttccc 37398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 8154989 - 8155329
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| |||||||  || | ||  ||||||||  |||| ||| ||||||| ||| |||| ||||||| ||||||||| |||||||||| |    
T  8154989 aaaatagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaatcttcctagc 8155088  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| |||||| ||||||| |||  |||||||||| |||||| ||||||| || ||||||||||| |||| || ||||| |||| ||||||| |    
T  8155089 tcttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaattgttctgaaacttcccaaaaaaatca 8155188  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc-------- 644  Q
    || |          |||||||||| |||||||||| || | |||||||| | ||||||  ||| ||||||  |||||||||| |||||||||            
T  8155189 gaaa------aaattcaaggatcatgactcccgtacaaggaacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccattttat 8155282  T
Q  645 --tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
      | ||||||||| ||||||| |||||||||||| ||||||||||||    
T  8155283 attttttttaattattcatattctcagaaaaatctgaaaaaatttgc 8155329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 493
Target Start/End: Original strand, 5278347 - 5278494
Alignment:
Q  346 caagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatct 445  Q
    ||||||||||| |||||||||| ||||||| ||| |||| ||||| |||   | | ||||||||||| ||| |||||||||||| ||| |||||||||||    
T  5278347 caagggaaaaatagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatct 5278446  T
Q  446 tcctaactctcatccttatgttttgggtcattgttagttgttcttagt 493  Q
    |||||||||| |||||| |||||||||||||||||||  |||||||||    
T  5278447 tcctaactcttatccttctgttttgggtcattgttagccgttcttagt 5278494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 33574112 - 33573915
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||| ||| ||||||| ||| ||||  ||||||||   ||| ||| ||||||| ||| |||   |||||| |||||||||||||||| |||||    
T  33574112 aaaatagttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaac 33574013  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| |||||| ||||||| ||||||||||  |||| ||| | |||||||||||||| |  ||||||||||||||||||| ||||| ||||||||||||    
T  33574012 tcttatccttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttccccaaaaaat 33573915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 353 - 462
Target Start/End: Complemental strand, 24042257 - 24042148
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||  |||||||||||| ||||||||| ||||||||||||    
T  24042257 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaac 24042158  T
Q  453 tctcatcctt 462  Q
    ||||||||||    
T  24042157 tctcatcctt 24042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 353 - 481
Target Start/End: Complemental strand, 37518364 - 37518236
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  |||| |||  |||| ||||||||||| |   |||||||||||| | ||| ||||||||||||||||    
T  37518364 aaaacagttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaac 37518265  T
Q  453 tctcatccttatgttttgggtcattgtta 481  Q
    |||||||||| |||||| |||||||||||    
T  37518264 tctcatccttctgttttaggtcattgtta 37518236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 470 - 689
Target Start/End: Complemental strand, 37518215 - 37517992
Alignment:
Q  470 gggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntca 569  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||| ||||| ||| |          |||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttccccagaaaatcagaaa------aaattca 37518122  T
Q  570 aggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc----------tatttttaatttttc 659  Q
    |||| || ||||||| |||||  |||||||||   ||||||  ||| ||||||  ||||||||||||||||||||          | ||||| |||||||    
T  37518121 aggaccatgactcccatagaagagacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccatttttttattttttttatttttc 37518022  T
Q  660 atatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| |||||||||||||||||||||||||    
T  37518021 atattctcagaaaaatccgaaaaaatttgc 37517992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 550
Target Start/End: Complemental strand, 26555128 - 26555029
Alignment:
Q  451 actctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||||| | ||||||||||||||||  ||||||||||||||||  ||||||| || ||||||||||||||||||| ||||| | |||| |||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactttcccagaaaat 26555029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 369 - 537
Target Start/End: Complemental strand, 48776264 - 48776094
Alignment:
Q  369 tataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctta--tgt 466  Q
    |||||||| |||| || |||||||||   | | ||||||| ||| ||| ||||| |||||| ||| |||||||||||||||||||||||| | ||    |    
T  48776264 tataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcatgcatagtcat 48776165  T
Q  467 tttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    ||| |||||||| |||||||||||||| ||||||| | |||| |  |||||| ||| ||||||||||||||    
T  48776164 tttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctccgaaac 48776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 550
Target Start/End: Complemental strand, 48705985 - 48705871
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||||||  ||| ||||||||| ||||||||||  ||||||| |||||||||||   |||| || ||||||||||  |||| ||||||    
T  48705985 atattaatcttcctaactcggatctttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatcatattgttccgaa 48705886  T
Q  536 acatccccaaaaaat 550  Q
    || | ||||||||||    
T  48705885 actttcccaaaaaat 48705871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 437 - 522
Target Start/End: Original strand, 39581913 - 39581998
Alignment:
Q  437 tattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatc 522  Q
    ||||||||||| |||||||||| ||| |||||| |||||||||||||| ||||| || ||||||  ||||||||| ||||||||||    
T  39581913 tattaatcttcataactctcattcttctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatc 39581998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 496
Target Start/End: Complemental strand, 16983812 - 16983668
Alignment:
Q  352 aaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaa 451  Q
    |||||||||||||||| ||||||| ||||||||  ||||||||   |     ||||||||| ||| |||  || ||||  ||||||||||||||||||||    
T  16983812 aaaaacagttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaa 16983713  T
Q  452 ctctcatccttatgttttgggtcattgttagttgttcttagtaaa 496  Q
    ||||||||||| | |||| ||||||| |||| |||||||| ||||    
T  16983712 ctctcatccttctatttttggtcattattagctgttcttaataaa 16983668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 482
Target Start/End: Original strand, 43185888 - 43186001
Alignment:
Q  369 tataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttt 468  Q
    |||||||| || ||||  ||||||||   ||| ||||||| ||| ||| ||| ||||||| |||||||||||||  |||||||||||||| ||||| |||    
T  43185888 tataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatacttatattt 43185987  T
Q  469 tgggtcattgttag 482  Q
    | ||||||||||||    
T  43185988 taggtcattgttag 43186001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 48775704 - 48775840
Alignment:
Q  357 cagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctc 456  Q
    ||||| ||||| ||||||||||| ||||   |||||||   ||| |||| |||||| ||||||||||| |||| ||||||||||||||||||||||| ||    
T  48775704 cagttaggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaactatc 48775801  T
Q  457 atcctta--tgttttgggtcattgttagttgttcttagt 493  Q
    ||   ||    |||| |||||||||||||||||||||||    
T  48775802 atggatagtcattttaggtcattgttagttgttcttagt 48775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 8214310 - 8214243
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||||||| || ||| ||||||||| || ||||||||||||||||||||||||||||| || ||||||    
T  8214310 catgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactctcatcattgtgtttt 8214243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 8214521 - 8214462
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcct 461  Q
    ||||||||||| ||  || ||||||||| |||||||||||||||||||||||||||||||    
T  8214521 catgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 37218296 - 37218221
Alignment:
Q  256 gaaaaaattagttcttcctcaattcgaattttataagccgaaaacttcaaaaaatatggcgctttacttgattttt 331  Q
    |||||||| ||||||||  ||||||| ||||||||| ||||||||||||||||||| ||| | || ||||||||||    
T  37218296 gaaaaaatgagttcttcaccaattcggattttataatccgaaaacttcaaaaaatagggcacattccttgattttt 37218221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 658
Target Start/End: Complemental strand, 28230352 - 28230262
Alignment:
Q  568 caaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||| || ||||||| |||||||  ||| ||| | ||||||| ||| |||||| ||||||||||||||||||||| |||||| ||||||    
T  28230352 caaggaccatgactcccttagaaagaccttattatgggactccacccctcaaaatctaaaattccatcgtttagacccatttttcattttt 28230262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 573 - 644
Target Start/End: Complemental strand, 5731133 - 5731063
Alignment:
Q  573 atcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc 644  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||| ||||||  ||||||||||| ||||||||    
T  5731133 atcaagactcccttagaagggacttcttacgagactcca-ccctcaaaatccaaaattccatcatttagacc 5731063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 6467769 - 6467819
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgta 384  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  6467769 aacaccctttttc-aagggaaaaacagttcggattatataatccgaactgta 6467819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 16278246 - 16278312
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||||||||| ||| |||||||||||| |||||||||||||| || | |||| ||||||| ||||||    
T  16278246 atgtttgtaacatggatagtcattttaaggacaatattaatcatctttactcccatccttgtgtttt 16278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 42925407 - 42925365
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  42925407 tttttaatttttcatattctcagaaaaatctgaaaaaatttgc 42925365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 43185751 - 43185817
Alignment:
Q  246 gttatagggtgaaaaaatt-agttcttcctcaattcgaattttataagccgaaaacttcaaaaaata 311  Q
    |||||||||||||||||   |||| |||  ||||||||||||||||| |||||||||||||||||||    
T  43185751 gttatagggtgaaaaaaaagagtttttcaccaattcgaattttataatccgaaaacttcaaaaaata 43185817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 641
Target Start/End: Original strand, 43186083 - 43186157
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttag 641  Q
    |||||||||||||||||| ||||| |||||||||| | ||||||  |||  |||||  |||||||||||||||||    
T  43186083 tcaaggatcaagactcccttagaagggacttcttacgggactccgcccctaaaaatccaaaattccatcgtttag 43186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 684
Target Start/End: Original strand, 36629594 - 36629631
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaa 684  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  36629594 tttttaatttttcatattctcagaaaaatccgaaaaaa 36629631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 5731001 - 5730941
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctca 457  Q
    |||| ||||||||||  ||||||||||||||||   |||||||||||||| ||||||||||    
T  5731001 ctaaacatgtttgtagcatgaatagtcattttaaatacaatattaatctttctaactctca 5730941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 658
Target Start/End: Complemental strand, 3304612 - 3304521
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||| || ||||||  ||||| |||||||||| | ||||||  ||| ||||||  |||||| ||| |||||||||||||||| ||||||    
T  3304612 tcaaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacctattttttattttt 3304521  T

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Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 687
Target Start/End: Complemental strand, 19225362 - 19225327
Alignment:
Q  652 aatttttcatatactcagaaaaatccgaaaaaattt 687  Q
    |||||||||||| |||||||||||||||||||||||    
T  19225362 aatttttcatattctcagaaaaatccgaaaaaattt 19225327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 684
Target Start/End: Original strand, 36408719 - 36408777
Alignment:
Q  625 aaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaa 684  Q
    |||||||||||||| ||| | ||||| |||||||||||| |||| |||||||||||||||    
T  36408719 aaaattccatcgtt-agatccattttaaatttttcatattctcaaaaaaatccgaaaaaa 36408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 449 - 499
Target Start/End: Original strand, 30861264 - 30861314
Alignment:
Q  449 taactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||    
T  30861264 taactatcatccttctgttttaggtcatttttagttgttctcagtaaaaaa 30861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 658
Target Start/End: Complemental strand, 37217535 - 37217502
Alignment:
Q  625 aaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||||||||||||| |||||||||||||    
T  37217535 aaaattccatcgtttagacccatttttaattttt 37217502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 3e-72; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 333 - 689
Target Start/End: Original strand, 34853400 - 34853748
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || |||||||| |||||| |||||||| || ||||  ||||||||  ||||  |||||||||| ||| |||||||||||| ||    
T  34853400 aacaccctttttcaa--ggtaaaacagtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttaggg 34853497  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||  | |||| | ||||| ||  |||||||||||||||||||    
T  34853498 acaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctcc 34853597  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| ||| |          ||||||| || ||||||| |||||||||||||||  | ||||||  ||| ||||||| ||||||||    
T  34853598 gaaacttccccataaaatcagaaa------aaattcaaggaccatgactcccttagaaaggacttcttctgggactccgcccctcaaaataaaaaattcc 34853691  T
Q  633 atcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  34853692 atcgtttagacccatttttaatttttcatattctcagaaaaatctgaaaaaatttgc 34853748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 8885522 - 8885222
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  8885522 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 8885423  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| |||||||||| |||||||  ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| |||| ||||| |    
T  8885422 tctcatccttctgttttgggttattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacattcccagaaaatca 8885323  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||||||||| ||||||||||   ||||||  ||| ||||||  ||||||||||| |||||||| ||||||     
T  8885322 gaaa-----aaaattcaaggaccatgactcccgtagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcatttagacccatttttc 8885228  T
Q  653 attttt 658  Q
    ||||||    
T  8885227 attttt 8885222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 27928010 - 27927813
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  27928010 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaac 27927911  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||||||||||| || |||||||||| |||||||||||||| |||||| |||||    
T  27927910 tctcatccttctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaacttccccataaaat 27927813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 333 - 689
Target Start/End: Complemental strand, 42280978 - 42280627
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||| ||| ||||  ||||||||   ||| ||||||||||| ||| |||||||||||| ||    
T  42280978 aacaccctttttcaa--ggtaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcatagtcattttaggg 42280881  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||| || |    
T  42280880 acaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatttttggactacttgatcggattacttc 42280781  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| | | |          ||||||| ||  |||||| ||||| ||||||||||   ||||||  ||| ||||||  ||||||||    
T  42280780 gaaacttccccagaaaatcaaaaa------aagttcaaggaccataactcccctagaagggacttcttacaggactccgcccctcaaaatccaaaattcc 42280687  T
Q  633 atcgtttagacctattttt---aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||| ||||||   ||  |||||||| |||||||||||||||||||| ||||    
T  42280686 atcgtttagacccattttttaaaaaatttcatattctcagaaaaatccgaaaaaaattgc 42280627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 358 - 550
Target Start/End: Original strand, 9073599 - 9073791
Alignment:
Q  358 agttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctca 457  Q
    |||||||||| ||||| ||||| |||| |||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||    
T  9073599 agttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctca 9073698  T
Q  458 tccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||||||||||||||||||  |||||||||| |||||| |||||||||| ||||||||| ||||||||||||||| ||| || |||||    
T  9073699 tccttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcctcagaaaat 9073791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 354 - 550
Target Start/End: Original strand, 3094776 - 3094972
Alignment:
Q  354 aaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaact 453  Q
    ||||||||| |||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  3094776 aaacagttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaact 3094875  T
Q  454 ctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||| ||||||||||||||||||  |||||||||| |||||| | ||||| || ||||||||||||||||||||||||| | |||| |||||    
T  3094876 ctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctccgaaacttgcccagaaaat 3094972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 355 - 658
Target Start/End: Complemental strand, 11698383 - 11698086
Alignment:
Q  355 aacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactc 454  Q
    ||||||||||||| |||||| |||| ||||  |||| |||  |||| ||||||| ||| ||| |||||||||||| ||| ||||||||||||||||||||    
T  11698383 aacagttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactc 11698284  T
Q  455 tcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattaga 554  Q
    ||||||||  ||||| |||||||||||  |||||||||| |||||| ||||||| || ||||||||||||| ||||||||||| |||||| ||||| |||    
T  11698283 tcatccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttccccagaaaatcaga 11698184  T
Q  555 gagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaat 654  Q
     |          ||||||| || ||||||| ||||| |||| ||||| | ||||||  ||| ||||||  |||||||||||||||||||| |||||||||    
T  11698183 aa------aaattcaaggaccatgactcccatagaagggacgtcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttaat 11698090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 333 - 658
Target Start/End: Complemental strand, 14164144 - 14163827
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  14164144 aacaccctttttcaa--ggtaaaacagttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 14164047  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||  |||||||||| ||||| || ||||| ||  ||||||||||| |||||||    
T  14164046 acaatattaattttcctaactctcatccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctcc 14163947  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| ||| |          ||||||| || | ||||| || |||  |||||||| | ||||||  ||| ||||||| ||||||||    
T  14163946 gaaacctccccagaaaatcagaaa------aaattcaaggaccatggctcccttataaataacttcttacgggactccgcccctcaaaataaaaaattcc 14163853  T
Q  633 atcgtttagacctatttttaattttt 658  Q
    ||| ||||||||||||||| ||||||    
T  14163852 atcatttagacctatttttcattttt 14163827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 331 - 542
Target Start/End: Original strand, 40392605 - 40392815
Alignment:
Q  331 tgaacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttat 430  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||| | | ||||  ||||||||  |||| ||||||||||| ||| |||||||||||||    
T  40392605 tgaacacccgttttc-aagggaaaaacagttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttat 40392703  T
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| ||||||   |||||    ||||||||||||||| ||    
T  40392704 ggacaatattaatcttcctaactcttatctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttct 40392803  T
Q  531 ccgaaacatccc 542  Q
    ||||||| ||||    
T  40392804 ccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 333 - 550
Target Start/End: Original strand, 44106295 - 44106510
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||  ||||    
T  44106295 aacaccctttttcaa--ggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatgg 44106392  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||| ||||||| |  |||||||||| ||||||||     
T  44106393 acaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggttttcgtgctacttgatctgattgctct 44106492  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||| |||||| |||||    
T  44106493 gaaacttccccataaaat 44106510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 350 - 554
Target Start/End: Complemental strand, 17119951 - 17119747
Alignment:
Q  350 ggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcct 449  Q
    |||||| ||||||||||| ||||||| ||||||||  ||||||||  ||||  |||||||||| ||| || ||||||||| |||||||||||||||||||    
T  17119951 ggaaaaccagttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcct 17119852  T
Q  450 aactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaa 549  Q
    ||||||||||||| |||||||| |||||||||  |||||||||| |||||  ||||||| || ||||||||| ||||| ||||||||| ||||||  |||    
T  17119851 aactctcatccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttccccaggaaa 17119752  T
Q  550 ttaga 554  Q
    |||||    
T  17119751 ttaga 17119747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 364 - 550
Target Start/End: Original strand, 28916876 - 28917062
Alignment:
Q  364 gattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctta 463  Q
    |||| ||||||||||| ||||  ||||||||  |||| ||||||||| | ||| |||||||||||| |||||||||||||||| |||||||||||||||     
T  28916876 gattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttc 28916975  T
Q  464 tgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||||||||||||  ||||||| |||||||| | || |||| | ||||||||||||||||||||||||| |||||| |||||    
T  28916976 tgttttgggtcattgttacatgttcttggtaaaaaaatcgggttttcgactacttgatcggattgctccgaaacttccccagaaaat 28917062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 358 - 550
Target Start/End: Complemental strand, 36165902 - 36165709
Alignment:
Q  358 agttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctca 457  Q
    |||||||||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||| ||||| ||||||  |||||||||||||||| |||||||||    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  458 tccttatgttttgggtcattgttagttgttcttagtaaaaaattggg-tttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||| ||||||||||||||||||  |||||||||| |||||  ||| ||||||| ||||||||||||||||||||||||| |||||| |||||    
T  36165802 tccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttccccagaaaat 36165709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 31519961 - 31519764
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  ||||  ||  |||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  31519961 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagccattttagggacaatattaatcttcctaac 31519862  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||  |||||| |||||| ||||||||||| ||||||||||| |||||| ||||||| || ||||||||||||||||||| ||||| |||||| |||||    
T  31519861 tcgtatccttttgtttttggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccataaaat 31519764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 346 - 554
Target Start/End: Original strand, 1076639 - 1076846
Alignment:
Q  346 caagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatct 445  Q
    |||||||||||||||||   || |||||||||||||||| |||||||||   ||| ||||||||||| |||||||  |||||||||||||||||||||||    
T  1076639 caagggaaaaacagttcaatttatataatccgaattgta-tagcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatct 1076737  T
Q  446 tcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaa 545  Q
    || || |||||||| || |||||||  |||||||||||||||||| || ||||||  | |||| || ||||||||| |||||||| |||||| |||| ||    
T  1076738 tcatagctctcatcattttgttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgcttcgaaacttcccaaa 1076837  T
Q  546 aaaattaga 554  Q
    |||||||||    
T  1076838 aaaattaga 1076846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 333 - 658
Target Start/End: Original strand, 36317862 - 36318185
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtt----tgtaatatgaatagtcatttt 428  Q
    ||||||| ||||  ||||||||||||||||||||| ||||||| ||| |||| |||||||||   | | ||||||    ||||| ||| ||| |||||||    
T  36317862 aacacccattttttaagggaaaaacagttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcatttt 36317961  T
Q  429 atggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattg 528  Q
    | |||||||||||||||| |||||||| ||| ||   ||||||||||||||||| |||||||||| | ||||| | |||| || |||||||||||||| |    
T  36317962 aaggacaatattaatctttctaactcttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatag 36318061  T
Q  529 ctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaa 628  Q
     ||| |||| | |||| |||||||| ||           |||||||||||||| || |||||| ||||||||| ||||||||| ||| |||||| |||||    
T  36318062 ttccaaaactttcccagaaaattag-ga-----aaaaaacaaggatcaagactaccttagaaatgacttcttatgagactccacccctcaaaatttaaaa 36318155  T
Q  629 ttccatcgtttagacctatttttaattttt 658  Q
    |||||||||||||||  |||||| ||||||    
T  36318156 ttccatcgtttagactcatttttcattttt 36318185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 397 - 633
Target Start/End: Original strand, 28423555 - 28423785
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaa 496  Q
    |||| ||||||||||| ||| ||   |||||||  ||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||| ||    
T  28423555 ctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttctattttgcgtcattg-tagttgttcttagtcaa 28423653  T
Q  497 aaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggact 596  Q
    ||||| | |||| || ||||||||||||||| ||||||||| |  ||| ||||||| | |          ||||||||||||||||||||||||||||||    
T  28423654 aaattagtttttcgggctacttgatcggattactccgaaacttagccagaaaattaaaaa-----aaatatcaaggatcaagactcccgtagaaaggact 28423748  T
Q  597 tcttaagagactccatcccacaaaatataaaattcca 633  Q
    ||||| | ||||||||||| ||||||  |||||||||    
T  28423749 tcttatgggactccatccctcaaaatccaaaattcca 28423785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 397 - 542
Target Start/End: Original strand, 40328031 - 40328176
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaa 496  Q
    |||| ||||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||| || |||||||||| |||||||  |||||||||| ||    
T  40328031 ctaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgttacctgttcttagtcaa 40328130  T
Q  497 aaattgggtttttggcctacttgatcggattgctccgaaacatccc 542  Q
    |||| ||||||| || |||||||||||||||||||| |||| ||||    
T  40328131 aaatcgggttttcggactacttgatcggattgctccaaaacttccc 40328176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 341 - 531
Target Start/End: Complemental strand, 4259716 - 4259528
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||||||||| | |||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||  |||||||||||||||||||||||    
T  4259716 tttttcaagggaaaaataattcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatatt 4259617  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    ||||||||||||| |||||||  | |||| | ||||||||||||||||||||| |||| |  |||||| || ||||| |||||| ||||||    
T  4259616 aatcttcctaactatcatcct--tcttttcgatcattgttagttgttcttagtcaaaactctggttttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 402 - 658
Target Start/End: Original strand, 36980708 - 36980958
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||| ||| |||||||| |||||||||| ||||| |||||||| |||||| | ||||||||||||||||| | |||||||| ||||||     
T  36980708 catgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttagctattcttagtcaaaaatc 36980807  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttctta 601  Q
     | |||| || ||||||||||||||||||||||||| ||| || ||||| || ||          |||||||||||||||||| ||||| ||||||||||    
T  36980808 cgattttcgggctacttgatcggattgctccgaaacttccacagaaaatcag-ga-----aaaaatcaaggatcaagactcccctagaagggacttctta 36980901  T
Q  602 agagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
       ||||||   || ||||||  ||||| |||||||||||||| ||||| |||||||    
T  36980902 caggactccgctcctcaaaattcaaaatcccatcgtttagacccattttaaattttt 36980958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 397 - 549
Target Start/End: Original strand, 21004518 - 21004670
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaa 496  Q
    |||| ||| ||||||| ||| |||| ||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||||||  |||||||||| ||    
T  21004518 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatccttttgttttgggtcattgttacatgttcttagtcaa 21004617  T
Q  497 aaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaa 549  Q
    |||| |||||||  | |||||||||| |||||||| ||||| || ||||||||    
T  21004618 aaatcgggttttccggctacttgatcagattgctctgaaacttctccaaaaaa 21004670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 422 - 543
Target Start/End: Original strand, 6395243 - 6395364
Alignment:
Q  422 tcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgat 521  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||| ||||| |||| ||||||  | |||| || |||||||||    
T  6395243 tcattttatggacaatattaaacttcctaactctcattcttctgttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgat 6395342  T
Q  522 cggattgctccgaaacatcccc 543  Q
    ||||||| || |||||||||||    
T  6395343 cggattgttctgaaacatcccc 6395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 554
Target Start/End: Original strand, 1374026 - 1374231
Alignment:
Q  349 gggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcc 448  Q
    |||||||||| |||||||| | ||||||||| | ||  | ||||||   ||| ||||||||||||||| |||||||  ||| | || ||||||||| | |    
T  1374026 gggaaaaacaattcggattatgtaatccgaactatatcatcacaaattataagcatgtttgtaatatggatagtcagattaagaactatattaatcattc 1374125  T
Q  449 taactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaa 548  Q
    ||||||||||||||||||||| ||||||||||||||||| | | | ||||||| || |||  | ||||||||||  |||||||| |||| |  |||||||    
T  1374126 taactctcatccttatgttttaggtcattgttagttgttttcattcaaaaatttggatttcagactacttgatcaaattgctccaaaacttttccaaaaa 1374225  T
Q  549 attaga 554  Q
    ||||||    
T  1374226 attaga 1374231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 353 - 454
Target Start/End: Original strand, 40994882 - 40994983
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  40994882 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 40994981  T
Q  453 tc 454  Q
    ||    
T  40994982 tc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 333 - 458
Target Start/End: Original strand, 16310671 - 16310794
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||  ||| ||||||||||| | ||  ||||||||  |||| ||||||||||| |||||||||||||||| ||    
T  16310671 aacaccctttttcaa--ggtaaaacagttcaaattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttaggg 16310768  T
Q  433 acaatattaatcttcctaactctcat 458  Q
    ||||||||||||||||||||||||||    
T  16310769 acaatattaatcttcctaactctcat 16310794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 353 - 458
Target Start/End: Original strand, 37248648 - 37248753
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||| | ||| ||||||||||||||||  ||||||||  |||| ||||||||| | ||| |||||||||||| ||||||||||||||||||||||    
T  37248648 aaaacagtttgaattatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaac 37248747  T
Q  453 tctcat 458  Q
    ||||||    
T  37248748 tctcat 37248753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 33472210 - 33472277
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  33472210 catgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcatccttgtgtttt 33472277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 418 - 536
Target Start/End: Original strand, 34645532 - 34645650
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctact 517  Q
    |||||||||||| ||| ||| ||||| || ||||||||||||||| |||||||| |||||||||  |||||||||| ||| ||  |||||| || |||||    
T  34645532 atagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggttttcgggctact 34645631  T
Q  518 tgatcggattgctccgaaa 536  Q
    |||||  ||||||||||||    
T  34645632 tgatcacattgctccgaaa 34645650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 469
Target Start/End: Complemental strand, 10833580 - 10833468
Alignment:
Q  357 cagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctc 456  Q
    |||||||||||| |||||| | | || || ||||| ||  || | ||||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||    
T  10833580 cagttcggatttcataatctggactgcaccagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttc 10833481  T
Q  457 atccttatgtttt 469  Q
    |||||| ||||||    
T  10833480 atccttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 537
Target Start/End: Original strand, 7981653 - 7981788
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||| ||| | |||||| ||||||| ||||  |||||||| ||||||||| |||||||||| ||||||||||||| ||| | ||||||     
T  7981653 catgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgttttgggttattgttagttgttattaattaaaaatg 7981752  T
Q  502 gggtttttggcctacttgatcggattgctccgaaac 537  Q
       ||||  | |||||||||||||||||| ||||||    
T  7981753 caattttcaggctacttgatcggattgcttcgaaac 7981788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 9845325 - 9845392
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  9845325 catgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtccttatatttt 9845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 33472417 - 33472484
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  33472417 catgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatcatccttgtgtttt 33472484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 404 - 537
Target Start/End: Complemental strand, 8621657 - 8621522
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatg--ttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    |||| |||| ||| ||| |||||||| ||| |||||||||||| |||||||| ||   ||    |||| ||||||||||||||||||||||| ||||||     
T  8621657 tgttcgtaacatggataatcattttaaggataatattaatctttctaactcttatggataatcattttaggtcattgttagttgttcttagtcaaaaatc 8621558  T
Q  502 gggtttttggcctacttgatcggattgctccgaaac 537  Q
       ||||||  |||||||||||||||||||||||||    
T  8621557 caatttttgagctacttgatcggattgctccgaaac 8621522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 571 - 643
Target Start/End: Original strand, 9845394 - 9845465
Alignment:
Q  571 ggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagac 643  Q
    ||||||||||| || ||||| |||||||||| | ||||||||||| |||||| ||||||||||||||||||||    
T  9845394 ggatcaagacttccttagaa-ggacttcttacgggactccatccctcaaaatttaaaattccatcgtttagac 9845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 436 - 500
Target Start/End: Original strand, 39093681 - 39093745
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaat 500  Q
    ||||||||||| | || ||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  39093681 atattaatctttcaaagtctcatctttatgttttaggtcattgttaattgttcttagtaaaaaat 39093745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 7982517 - 7982572
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctca 457  Q
    ||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  7982517 catgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactctca 7982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 406 - 469
Target Start/End: Complemental strand, 31234534 - 31234471
Alignment:
Q  406 tttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||| | ||||||    
T  31234534 tttgtaacatggatagtcattttaaggacaatattaatcttcctaactcccatccatgtgtttt 31234471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 1076508 - 1076575
Alignment:
Q  246 gttatagggtgaaaaaa--ttagttcttcctcaattcgaattttataagccgaaaacttcaaaaaata 311  Q
    |||||||||||||||||  | ||||||||  ||||||| ||||||||| |||||||||||||||||||    
T  1076508 gttatagggtgaaaaaaaatgagttcttcaccaattcggattttataatccgaaaacttcaaaaaata 1076575  T

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Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 431 - 486
Target Start/End: Complemental strand, 10840748 - 10840693
Alignment:
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgt 486  Q
    |||||||||||||||||||||||||||||||| ||  || |||| |||||||||||    
T  10840748 ggacaatattaatcttcctaactctcatccttctggattaggtccttgttagttgt 10840693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 403 - 450
Target Start/End: Original strand, 24627714 - 24627761
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttccta 450  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  24627714 atgtttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 24627921 - 24627988
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  ||||||||||||  ||||||||||||||||||| || |||||||| ||||||    
T  24627921 catgtttgtaacattgatagtcattttaatgacaatattaatcttcctagctttcatccttgtgtttt 24627988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 41530814 - 41530881
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| |||||||||| | |||||||||||||||||||| || || ||||| ||||||    
T  41530814 catgtttgtaacatggatagtcatttcaaggacaatattaatcttcctagctttcgtccttgtgtttt 41530881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 40995058 - 40995100
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  40995058 tttttaatttttcatattctcagaaaaatcagaaaaaatttgc 40995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 44106606 - 44106648
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  44106606 tttttcatttttcatattctcagaaaaatccgaaaaaatttgc 44106648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 641 - 689
Target Start/End: Original strand, 21004693 - 21004741
Alignment:
Q  641 gacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| |||||||||| ||||||| |||||||||||| ||||||||||||    
T  21004693 gacccatttttaattattcatattctcagaaaaatctgaaaaaatttgc 21004741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 7965990 - 7965935
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctca 457  Q
    ||||||||||| ||| ||||||| |||| |||||||| || |||||||||||||||    
T  7965990 catgtttgtaacatggatagtcactttaaggacaatactagtcttcctaactctca 7965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 21594451 - 21594401
Alignment:
Q  188 tttcaaaaatgcctttgaacaatttggattttaaaatccaaattcatgttt 238  Q
    ||||||||||||| |||  ||||| |||||||||||||| |||||||||||    
T  21594451 tttcaaaaatgcccttgtgcaattcggattttaaaatccgaattcatgttt 21594401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 27927720 - 27927678
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||||||  |||||||||| |||||||||||||    
T  27927720 tttttaatttttcatattatcagaaaaattcgaaaaaatttgc 27927678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 17120149 - 17120077
Alignment:
Q  188 tttcaaaaatgcctttgaacaatttggattttaaaatccaaattcatgttttccctgcgttatagggtgaaaaa 261  Q
    ||||||||||||| |||  |||| ||||||||| ||||| |||||| ||||| |||  ||||||||||||||||    
T  17120149 tttcaaaaatgcccttgtgcaatgtggattttataatccgaattca-gtttttcctttgttatagggtgaaaaa 17120077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 280 - 658
Target Start/End: Complemental strand, 52744984 - 52744613
Alignment:
Q  280 cgaattttataagccgaaaacttcaaaaaatatggcgctttacttgat-ttttgaacaccctttttccaagggaaaaacagttcggattttataatccga 378  Q
    |||||||| ||| | ||||||||||||||||| |||||  ||| |||| |||| |||||| |||||| |  || |||||| ||||||||  |||||| ||    
T  52744984 cgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgatattttcaacaccttttttcaa--ggtaaaacaattcggattaaataatctga 52744887  T
Q  379 attgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattg 478  Q
    | ||||  |||||||| ||||| ||||||||||| ||| |||||||||||| | |||| ||||||||||||||||||||||||| |||||||||||||||    
T  52744886 actgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatccttctgttttgggtcattg 52744787  T
Q  479 ttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaag 578  Q
    ||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||| ||||| ||| |          ||||||| || |    
T  52744786 ttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaa------aaattcaaggaccatg 52744693  T
Q  579 actcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||| | ||||| ||||||||||  |||||||| | | ||||||  |||||| |||||||||||||||||||| ||||||    
T  52744692 actctcatagaagggacttcttacaagactccacctctcaaaattcaaaatttcatcgtttagacctatttttcattttt 52744613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 333 - 683
Target Start/End: Original strand, 34006331 - 34006674
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |||||||||||||||| |||| |||||||| ||||||| |||||||||   |||  |||||||||| ||| |||||||||||| ||    
T  34006331 aacaccctttttc-aagggaaaaacagttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttaggg 34006429  T
Q  433 a-caatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    | ||||||||||||||||||||||||||||| | ||||| ||||||| ||  |||||||||| ||||||| |||||| || |||||||||||||||||||    
T  34006430 aacaatattaatcttcctaactctcatccttctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctc 34006529  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
    |||||| |||||| ||||| ||| |          |||||||||| ||||||||||||| |||||||||| | |||||| |||| ||||||  ||||||     
T  34006530 cgaaacttccccagaaaatcagaaa------aaattcaaggatcatgactcccgtagaagggacttcttacgggactccgtccctcaaaatccaaaattt 34006623  T
Q  632 catcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaa 683  Q
    ||||| |||||||  |||||||||||| |||| || |||||||||| |||||    
T  34006624 catcg-ttagacccgtttttaattttttatattcttagaaaaatccaaaaaa 34006674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 353 - 651
Target Start/End: Complemental strand, 45046919 - 45046627
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  45046919 aaaatagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaac 45046820  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||  ||||||| || ||||||||||||||||||||||||| | |||||||||| |    
T  45046819 tctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctccgaaacttgcccaaaaaatca 45046720  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    || |          ||||||| || ||||||| ||||| |||||||||| ||||||||  ||| ||||||  |||||||||||||||||| | ||||||    
T  45046719 gaaa------aaattcaaggaccatgactcccttagaagggacttcttatgagactccgcccctcaaaatccaaaattccatcgtttagatccattttt 45046627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 372 - 652
Target Start/End: Complemental strand, 41584715 - 41584441
Alignment:
Q  372 aatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgg 471  Q
    |||||||| ||||  ||||||||  |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41584715 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgg 41584616  T
Q  472 gtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaag 571  Q
    ||||||||||  |||||||||| |||||| ||||||| || ||||||||||||||||||||||||| | |||| ||||| ||| |          |||||    
T  41584615 gtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaa------aaattcaag 41584522  T
Q  572 gatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || || ||||||| ||||| |||||||||| | ||||||  ||| || ||| ||||||||||| ||||||||| |||||||    
T  41584521 gaccatgactcccatagaagggacttcttacgggactccgcccctcacaatctaaaattccattgtttagacccattttta 41584441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 49677573 - 49677770
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  |||| |||  |||| ||||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  49677573 aaaacagttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaac 49677672  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||| ||||||||||||||||||||||  |||||||||| |||||| |||||||  ||||||||||||||||||||||||||| |||||| |||||    
T  49677673 tctcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttccccagaaaat 49677770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 372 - 550
Target Start/End: Complemental strand, 45567940 - 45567762
Alignment:
Q  372 aatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgg 471  Q
    |||||||| ||||  ||||||||  |||| ||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  45567940 aatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccatttgttttgg 45567841  T
Q  472 gtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||||  ||||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  45567840 gtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccaaaaaat 45567762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 333 - 554
Target Start/End: Complemental strand, 28866718 - 28866498
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||  ||||||||||||||||||||| ||||||| ||| ||||  ||||||||   ||| ||||||||||| ||| |||| ||||||||||    
T  28866718 aacacccttttta-aagggaaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatgg 28866620  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||| | ||||||||| |||||||||||||| ||||||||| ||||||||  |||||||||| |||||| ||  ||| || ||||||||||||||||||||    
T  28866619 acatttttaatcttcataactctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctcc 28866520  T
Q  533 gaaacatccccaaaaaattaga 554  Q
    ||||| ||||||||||||||||    
T  28866519 gaaacttccccaaaaaattaga 28866498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 42546057 - 42546398
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| ||||||||||||  || |||||||||| | |||||    
T  42546057 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaac 42546156  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggttttt-ggcctacttgatcggattgctccgaaacatccccaaaaaatt 551  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||  |||||||| || ||||||||||||||||||||||||| |||||| |||||     
T  42546157 tctcatccttctgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttccccagaaaatc 42546256  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc------- 644  Q
    ||| |          | ||||| || ||||||| ||||| | |||||||| | ||||||  ||| ||||||  ||||||||||||||||||||           
T  42546257 agaaa------aaatttaaggaccatgactcccttagaaggaacttcttacgggactcc-gccctcaaaatccaaaattccatcgtttagacccattttt 42546349  T
Q  645 ----tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
        | ||||||||||||||||| |||||||||||||||||||||||||    
T  42546350 catttttttttaatttttcatattctcagaaaaatccgaaaaaatttgc 42546398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 40908002 - 40907704
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||| || ||| ||||  ||||||||  |||| ||||||||||| ||| ||| ||||||||  |||||||||||||||||||||    
T  40908002 aaaacagttcggattatata-tctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaac 40907904  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    || |||| || || |||||||||||||||  |||| |||||||||||| ||||||| || ||||||||||||||||||||||||| |||||| ||||| |    
T  40907903 tcccatctttctgctttgggtcattgttacctgttgttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatca 40907804  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          |||||||||| ||||| | || || |||||||||| | ||||||  ||| ||||||  |||||||||||||||||||| |||||||    
T  40907803 gaaa------aaattcaaggatcatgactctcataaaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttta 40907710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 335 - 652
Target Start/End: Complemental strand, 24472913 - 24472604
Alignment:
Q  335 caccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggac 434  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||| | || |||||||||   ||| ||||||||||| ||| |||||||||||| |||     
T  24472913 caccctttttc-aagggaaaaacaattcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaa 24472815  T
Q  435 aatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccga 534  Q
    |||||||| |||||||||| |||| ||| |||||| |||||||||||| |||||||||| |||||| |  ||| ||| | ||||||| ||||||||||||    
T  24472814 aatattaagcttcctaactatcattcttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccga 24472715  T
Q  535 aacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccat 634  Q
    ||| |||||| ||||| ||| |          |||||||||||||||||| ||||| |||||||||  | ||||||  ||  ||||||  |||||| |||    
T  24472714 aacttccccagaaaatcagaaa-------aaatcaaggatcaagactcccatagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcat 24472622  T
Q  635 cgtttagacctattttta 652  Q
    |||||||||| |||||||    
T  24472621 cgtttagacccattttta 24472604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 7011300 - 7011497
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  |||| |||  |||| ||||||| ||| ||| |||||||||||| ||||||||||||||||| ||||    
T  7011300 aaaatagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaac 7011399  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| |||||| ||||||||| |  |||| ||||| |||||| ||||||| || |||||||||||||||||||||||||||||||| |||||    
T  7011400 tctcatccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacatccccagaaaat 7011497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 23442828 - 23443025
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| |||||||| || ||||  ||||||||  |||| ||| ||||||| ||| | || ||||||| ||||||||||||||||||||||    
T  23442828 aaaatagttcggattatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaac 23442927  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  23442928 tcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttccccaaaaaat 23443025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 33611479 - 33611282
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||| ||||||| |||||||||| ||||||||||     
T  33611479 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaa 33611380  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  33611379 tcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaat 33611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 18583613 - 18583314
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||| ||| ||||   |||||||  |||| ||| ||||||| ||| |||| ||||||| ||||||||||||||| ||||||    
T  18583613 aaaatagttcggattatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaac 18583514  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||||||||| ||||| |||||||||||| |    
T  18583513 tcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttccccaaaaaatca 18583414  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    ||            ||||||| || ||||||| |||||  ||||||||| | ||||||  ||| ||||||  |||||||||| ||||||||| ||||||     
T  18583413 ga------acaaattcaaggaccacgactcccatagaagagacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccatttttc 18583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 421 - 689
Target Start/End: Original strand, 38885371 - 38885639
Alignment:
Q  421 gtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttga 520  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||    
T  38885371 gtcattttaaggacaatattaattttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttga 38885470  T
Q  521 tcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaa 620  Q
    ||||||||||||||||| | |||||||||| | | |          ||||| | ||  |||| | | ||| |||||||||| | ||||||  ||| ||||    
T  38885471 tcggattgctccgaaactttcccaaaaaataaaaaa------aaattcaagcaccataactctcctggaagggacttcttatgggactccgcccctcaaa 38885564  T
Q  621 atataaaattccatcgtttagacctat------ttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||  |||||||||||||||||||| ||      |||| ||||||||||| |||||||||||||||||||||||||    
T  38885565 attcaaaattccatcgtttagacccatttttcatttttatttttcatattctcagaaaaatccgaaaaaatttgc 38885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 49786358 - 49786657
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| |||||||| || ||||  ||||||||  |||| | | ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  49786358 aaaatagttcggattatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaac 49786457  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| |||||||||||| |||||  |||| ||||| ||||||   ||||| |||||||||||||||||||||| ||||| |||||||||||| |    
T  49786458 tcttatccttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagttttcggcctacttgatcggattgctctgaaacttccccaaaaaatca 49786557  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || |||||||||||||  ||||||||| ||||||||  ||| ||||||  |||||||||| ||| | ||| ||||||     
T  49786558 gaaa------aaattcaaggaccatgactcccgtagaagagacttcttatgagactccgcccctcaaaatccaaaattccattgttcaaacccatttttc 49786651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 26723576 - 26723360
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||  ||||||||||| ||||||||| ||||||||||| | ||  ||||||||    || ||||||||||| |||| ||||||||||| ||    
T  26723576 aacaccctttttt-aagggaaaaacggttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatga-tagtcattttaggg 26723479  T
Q  433 a-caatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    | |||||||||||||||| ||||| ||| || | ||||| ||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  26723478 aacaatattaatcttccttactctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctc 26723379  T
Q  532 cgaaacatccccaaaaaat 550  Q
    |||||| |||||| |||||    
T  26723378 cgaaacttccccagaaaat 26723360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 305 - 550
Target Start/End: Original strand, 27794871 - 27795117
Alignment:
Q  305 aaaaatatggcgctttacttgattttt---ga-acaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaa 400  Q
    ||||||| |||||||||| ||||||||   || |||||||||||| |  ||||||| |||||| ||| ||||||| ||| ||||  ||| ||||   |||    
T  27794871 aaaaatagggcgctttacatgattttttcggatacaccctttttcaa--ggaaaaatagttcgaattatataatctgaactgtatcagcgcaaattttaa 27794968  T
Q  401 tcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaat 500  Q
     ||||||| ||| ||  |||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||  |||||||||| ||| ||    
T  27794969 acatgtttataacatagatagtcattttatggacaatattaatcttcctaactatcatc-ttctgttttgggtcattgttacctgttcttagtcaaacat 27795067  T
Q  501 tgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
     |||||||||| ||||||||||||||||||||||||| ||| || |||||    
T  27795068 cgggtttttgggctacttgatcggattgctccgaaacttccacagaaaat 27795117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 353 - 537
Target Start/End: Complemental strand, 40650744 - 40650560
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||| ||| ||| ||||  ||||||||   ||| ||||||||||| ||| ||| |||||||| ||||||||||||||||||||||    
T  40650744 aaaacagttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaac 40650645  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    |||||||||| |  |||||||||||||||  |||||||||| |||||  | ||||| || |||||||||||||||||||||||||    
T  40650644 tctcatccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaac 40650560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 353 - 689
Target Start/End: Complemental strand, 44573165 - 44572834
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||| ||| |||| |||||||||   ||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  44573165 aaaatagttcggattatataatctgaactgta-tagcacaaattataaacatgtttgtaacatgaatagtcattttagggacaatattaatctttctaac 44573067  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| |||||||| ||||||||| ||||||||||| |||| |     ||  || | |||||||| |||||||||||||| |||||| ||||| |    
T  44573066 tctcatccttctgttttggatcattgttacttgttcttagtcaaaatt---acttaggggcaacttgatcagattgctccgaaacttccccataaaatca 44572970  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagac-----ctat 647  Q
    || |          ||||||| || ||||||| |||||  ||||||||| | ||||||  ||  ||||||  ||||||| |||||||||||      | |    
T  44572969 gaaa------aaattcaaggaccatgactcccatagaagagacttcttaggggactccgcccatcaaaattcaaaattctatcgtttagacttttttttt 44572876  T
Q  648 ttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  44572875 ttttaatttttcgtattctcagaaaaatccgaaaaaatttgc 44572834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 353 - 531
Target Start/End: Complemental strand, 15069910 - 15069732
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||||| |||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||| ||||||||||||  ||||||||||||||| |||||    
T  15069910 aaaacagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaac 15069811  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    | |||||||| |||||||| ||||||||| ||||||||||| |||||| || |||| |  |||||||||||||||||||    
T  15069810 tttcatccttctgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgctc 15069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 17000468 - 17000666
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||| | ||| ||||||| ||  ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  17000468 aaaacagtttgaattatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 17000567  T
Q  453 tctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||||  | ||||||||||||||||  |||||||||| |||||| |  |||| || ||||||||| ||||||||||||||| |||||| |||||    
T  17000568 tctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccccagaaaat 17000666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 3561423 - 3561207
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||||  ||||||||   | | ||||||||||| ||  ||||| |||||| ||    
T  3561423 aacaccctttttc-aagggaaaaacggttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaagg 3561325  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||| |||||||||| |||||||||||| || |||||| ||||||||||||||||||||||| ||||||  | | |||||  ||||||||| |||||||||    
T  3561324 acagtattaatctttctaactctcatcattctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctcc 3561225  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||| | |||| |||||    
T  3561224 gaaactttcccataaaat 3561207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 354 - 550
Target Start/End: Complemental strand, 34162790 - 34162593
Alignment:
Q  354 aaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaact 453  Q
    |||||||||| ||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||| ||||||| |||||||||||||||||||||||    
T  34162790 aaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaact 34162691  T
Q  454 ctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |  ||||||  | ||||||||||||||||  |||||||||| |||||| |  |||| || ||||||||| || |||||||||||| |||||| |||||    
T  34162690 cctatccttccgtttttgggtcattgttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttccccagaaaat 34162593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 403 - 689
Target Start/End: Complemental strand, 6223765 - 6223491
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattg 502  Q
    |||||||||| ||| |||||||||||| |||||||| |     |||||||| |||| ||| |||||| |||||||||||  |||||||||| |||||| |    
T  6223765 atgtttgtaacatggatagtcattttagggacaataat-----tcctaactatcattcttctgttttaggtcattgttacatgttcttagtcaaaaatcg 6223671  T
Q  503 ggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaa 602  Q
    |||||| || ||||||||||||||||||| ||||| | |||| ||||| ||| |          |||||||||| ||||||| |||||  |||||||||     
T  6223670 ggttttcgggctacttgatcggattgctctgaaactttcccagaaaatcagaaa-------aattcaaggatcatgactcccttagaagagacttcttac 6223578  T
Q  603 gagactccatcccacaaaatataaaattccatcgtttagacctattttt-aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    | ||| ||  ||| ||||||  |||||||||||||||||| | |||||| |||||||||||| || ||||||||||||||||||||||    
T  6223577 g-gacaccgcccctcaaaatccaaaattccatcgtttagatccatttttaaatttttcatattcttagaaaaatccgaaaaaatttgc 6223491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 333 - 476
Target Start/End: Complemental strand, 32817698 - 32817557
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  32817698 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttaggg 32817601  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcat 476  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  32817600 acaatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 402 - 542
Target Start/End: Complemental strand, 25563434 - 25563294
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||| |||| ||||||||| |||||| ||||||||||||||||| ||||| ||||||     
T  25563434 catgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaatc 25563335  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccc 542  Q
     | | || |  ||||||||||||||||||||||||| ||||    
T  25563334 cgatattcgagctacttgatcggattgctccgaaacttccc 25563294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 352 - 550
Target Start/End: Original strand, 42928973 - 42929171
Alignment:
Q  352 aaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaa 451  Q
    |||||| ||||||||| ||||||||| | ||||  || |||||   | | ||||||| ||| ||| || | ||||||| |||| |||||||| ||| |||    
T  42928973 aaaaactgttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaa 42929072  T
Q  452 ctctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||| |||||||||| | ||||||||||||||||| ||| ||||||  |||||| |  |||||||||| |||||||||||||| | |||| |||||    
T  42929073 ctctcattcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctccgaaactttcccataaaat 42929171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 436 - 554
Target Start/End: Complemental strand, 45880095 - 45879977
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||| || ||||| ||||||   ||||||||  |||||||||  |||||||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctccgaa 45879996  T
Q  536 acatccccaaaaaattaga 554  Q
    || |  ||| |||||||||    
T  45879995 acttatccagaaaattaga 45879977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 550
Target Start/End: Complemental strand, 5284306 - 5284191
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagt-aaaaaattgggtttttggcctacttgatcggattgctccga 534  Q
    |||||||||||||||||  ||||| || |||||| |||||||||||||||||| |||| |||||||    ||||||  |||||||||| ||||||||||     
T  5284306 atattaatcttcctaaccttcatcattctgttttaggtcattgttagttgttcctagtaaaaaaatctaatttttgagctacttgatcagattgctccgg 5284207  T
Q  535 aacatccccaaaaaat 550  Q
    |||||  |||||||||    
T  5284206 aacatttccaaaaaat 5284191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 800612 - 800545
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||  ||| |||||||||||  ||||||||||||| |||||||||||||||||| ||||||    
T  800612 catgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatccttgtgtttt 800545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 486
Target Start/End: Complemental strand, 38159043 - 38158996
Alignment:
Q  439 ttaatcttcctaactctcatccttatgttttgggtcattgttagttgt 486  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  38159043 ttaatcttcctaactctcatccttctgttttaggtcattgttagttgt 38158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 43319000 - 43318933
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| | ||||||||||||||||||||| |||||||| ||||||    
T  43319000 catgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatccttgtgtttt 43318933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 45567679 - 45567637
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  45567679 tttttaatttttcatattctcagaaaaatccgaaaaaatttgc 45567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 350 - 487
Target Start/End: Original strand, 890601 - 890738
Alignment:
Q  350 ggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcct 449  Q
    |||||| ||||||||||| ||| ||||||| ||||  ||||||||  ||||   ||||||||| ||| |||  || |||| ||||||||||||||||| |    
T  890601 ggaaaagcagttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatcttcat 890700  T
Q  450 aactctcatccttatgttttgggtcattgttagttgtt 487  Q
    ||||  |||  || |||||| |||||||||||| ||||    
T  890701 aacttccattattttgttttaggtcattgttagctgtt 890738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 689
Target Start/End: Original strand, 7011600 - 7011644
Alignment:
Q  645 tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  7011600 tatttttaatttttcatattctcagaaaaatctgaaaaaatttgc 7011644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 9445911 - 9445839
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||| ||| ||||||  ||| |||||||||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  9445911 ctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatccttgtgtttt 9445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 462
Target Start/End: Complemental strand, 9446160 - 9446055
Alignment:
Q  357 cagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctc 456  Q
    |||||||||||   |||||||||  |||| ||||| ||  || | ||||||| ||| ||| |||||||||||| ||||||||||||||||| || || ||    
T  9446160 cagttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttc 9446061  T
Q  457 atcctt 462  Q
    ||||||    
T  9446060 atcctt 9446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 658
Target Start/End: Complemental strand, 41584423 - 41584351
Alignment:
Q  586 tagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||| |||||||||| | ||||||  ||| |||||| ||||||||||| ||||||||| |||||| ||||||    
T  41584423 tagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagacccatttttcattttt 41584351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 8364147 - 8364213
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| ||||||||||||   | |||||||||| ||||||||||||||||| ||||||    
T  8364147 catgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgtttt 8364213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 43319211 - 43319144
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| ||| ||||||||||||| || || |||||||| ||||||    
T  43319211 catgtttgtaacattgatagtcattttaaggataatattaatcttcatagctttcatccttgtgtttt 43319144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 15069650 - 15069608
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  15069650 tttttcatttttcatattctcataaaaatccgaaaaaatttgc 15069608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 658
Target Start/End: Complemental strand, 33611246 - 33611180
Alignment:
Q  592 ggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||| | |||| | |||| ||||||  |||||||||| ||||||||| |||||||||||||    
T  33611246 ggacttcttacgggactacgtccctcaaaatccaaaattccattgtttagacccatttttaattttt 33611180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 44938067 - 44938025
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||    
T  44938067 tttttaattattcatattctcagaaaaatctgaaaaaatttgc 44938025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 426
Target Start/End: Original strand, 32542483 - 32542556
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcatt 426  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||||||||    
T  32542483 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcatt 32542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 593 - 658
Target Start/End: Original strand, 42929205 - 42929270
Alignment:
Q  593 gacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||  ||||| | |||| ||||||  ||||||||||||||||||| ||||||| ||||||    
T  42929205 gacttcttacaagacttcgtcccccaaaatcaaaaattccatcgtttagacatatttttcattttt 42929270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 1e-67; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 25491464 - 25491165
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||| |||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25491464 aaaacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaac 25491365  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||| |||||||||| |||||||||||||||||||| |||  |||||| ||||| |    
T  25491364 tctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttgatcggattgctccaaaatttccccagaaaatca 25491265  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||| ||||| |||||||| ||| || ||| |||| ||||||  |||||||||||||||||||| ||||||     
T  25491264 gaaa------aagttcaaggaccatgactcccttagaagggacttctcaagggattccgtccctcaaaatccaaaattccatcgtttagaccaatttttc 25491171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 333 - 689
Target Start/End: Complemental strand, 25752531 - 25752183
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||| ||||||| |||| |||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  25752531 aacaccctttttcaa--ggtaaaacagttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaagg 25752434  T
Q  433 acaatattaatcttcctaactctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    ||||||| |||||||||| |||||||| ||||| |||||||| |||||||  |||||||||| |||||| ||||||| || |||||||||| ||||||||    
T  25752433 acaatatcaatcttcctagctctcatctttatgtttttgggtgattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctc 25752334  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
    |||||| |||||| ||||| ||| |          ||||||| || ||||||| |||||  ||||||||| | ||||||  ||| ||||||  |||||||    
T  25752333 cgaaacttccccagaaaatcagaaa------agattcaaggaccatgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaattc 25752240  T
Q  632 catcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||    
T  25752239 catcgtttagacccatttttaattttt-atattctcagaaaaatctgaaaaaatttgc 25752183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 333 - 658
Target Start/End: Original strand, 40703744 - 40704061
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  40703744 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 40703841  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||| |||||||||| ||||||||||||||||||      
T  40703842 acaatattaatcttcctaactctcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaa 40703941  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| ||| |          ||||||| || |||| |  ||||| | |||||||| | ||||||  ||| |||||| |||||||||    
T  40703942 gaaacttccccagaaaatcagaaa------aaattcaaggaccatgacttcattagaaggaacttcttacgggactccgcccctcaaaatctaaaattcc 40704035  T
Q  633 atcgtttagacctatttttaattttt 658  Q
    |||||||| ||| |||||| ||||||    
T  40704036 atcgtttaaacccatttttcattttt 40704061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 353 - 689
Target Start/End: Complemental strand, 17933206 - 17932866
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||||||||||  |||  ||||||||  |||| ||||||||||| ||| ||| |||||||| ||||| ||||||||||||||||    
T  17933206 aaaacagttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaac 17933107  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||  | ||||  | | ||||||||||||||||||||||| || ||| ||||| |    
T  17933106 tctcatccttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttctccagaaaatca 17933007  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc-------- 644  Q
    || |          ||||||| || ||||||| ||||||| ||||||||||||| |||  | | ||||||  |||||||||| |||||||||            
T  17933006 gaaa------aaattcaaggaccatgactcccttagaaagaacttcttaagagattccgcctctcaaaatccaaaattccatagtttagacccatttttt 17932913  T
Q  645 --tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
      | ||||| ||||||||||| |||||||||||||||||||||||||    
T  17932912 atttttttttatttttcatattctcagaaaaatccgaaaaaatttgc 17932866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 333 - 537
Target Start/End: Complemental strand, 2506118 - 2505916
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||| ||||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||| |||||||||||| ||    
T  2506118 aacaccctttttcaa--ggtaaaacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttaggg 2506021  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||| || ||| ||||||| || ||||||||||||||||||||    
T  2506020 acaatattaatcttcctaattctcatccttctgttttgggtcattgttacatgttcttagtcaataatcgggttttcgggctacttgatcggattgctcc 2505921  T
Q  533 gaaac 537  Q
    |||||    
T  2505920 gaaac 2505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 41323180 - 41322964
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |||||||||||| |||||||| ||| ||   ||  |||  | ||||||  |||| ||||||||||| ||| ||| |||||||||||    
T  41323180 aacaccctttttc-aagggaaaaacaattcggattatatcattttaaccgtatcaacacaaattctaaacatgtttgtaacatggataatcattttatgg 41323082  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  41323081 acaatattaatcttcctaactctcatccttttgtttttggtcattgttaattgttcttagttaaaaattgagttttcggcatacttgatcggattgctcc 41322982  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||  |||||| |||||    
T  41322981 gaaagttccccagaaaat 41322964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 48319133 - 48318936
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||| ||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  48319133 aaaacagctcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaac 48319034  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||||| || |||| || |||||||||||||||||| |||||  |||||| |||||    
T  48319033 tctcatccttctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactacttgatcggattgcttcgaaatttccccagaaaat 48318936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 333 - 658
Target Start/End: Original strand, 19835600 - 19835917
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| |     
T  19835600 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagga 19835697  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||||||||||||||| || ||||||| ||||||||||  |||| ||||| |||| | ||||||| || ||||||||||||||||||||    
T  19835698 acaatattaatcttcctaactctcatctttctgttttgcgtcattgttacctgtttttagtcaaaagtcgggttttcggactacttgatcggattgctcc 19835797  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| | |||| ||||| ||| |          ||||| | || ||||||| || || |||||||||| | ||||||  ||| ||||||  ||||||||    
T  19835798 gaaactttcccagaaaatcagaaa------aaattcaagtaccatgactcccctaaaagggacttcttacgggactccgcccctcaaaatccaaaattcc 19835891  T
Q  633 atcgtttagacctatttttaattttt 658  Q
    || ||||||||| ||||||| |||||    
T  19835892 attgtttagacccatttttatttttt 19835917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 333 - 537
Target Start/End: Complemental strand, 31582509 - 31582307
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||| ||||||||  ||||||||  |||| ||||||||||| ||| ||||||||||||||     
T  31582509 aacaccctttttcaa--ggtaaaacagttcggattatataatctgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatga 31582412  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||   ||||| || ||| ||||||||||||||||    
T  31582411 acaatgttaattttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctcc 31582312  T
Q  533 gaaac 537  Q
    |||||    
T  31582311 gaaac 31582307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 431 - 658
Target Start/End: Complemental strand, 54631483 - 54631262
Alignment:
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||| ||||||| || ||||||||||||||||||    
T  54631483 ggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgct 54631384  T
Q  531 ccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaatt 630  Q
    || |||| |||||| ||||| ||| |          ||||||| || ||||||| |||||||||||||||| | ||||||   || ||||||| ||||||    
T  54631383 ccaaaacttccccagaaaatcagaaa------aaattcaaggaccatgactcccatagaaaggacttcttacgggactccgcacctcaaaatacaaaatt 54631290  T
Q  631 ccatcgtttagacctatttttaattttt 658  Q
    |||||||||||||| |||||| ||||||    
T  54631289 ccatcgtttagaccaatttttcattttt 54631262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 362 - 537
Target Start/End: Complemental strand, 53894085 - 53893910
Alignment:
Q  362 cggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcct 461  Q
    |||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  462 tatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    | ||||||||||||||||||  |||||||||| |||||| |||||||  | ||||||||||||||||||| |||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaac 53893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 6003742 - 6003545
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||   |||||||   ||| ||| ||| ||||||| |||||||||||| ||| ||||||||||||||||||    
T  6003742 aaaatagttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaac 6003643  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| |||||| |||||||||||||||||| ||||||||||| ||||||  |||||| || ||||||||| ||||||||| ||||| | ||||||||||    
T  6003642 tcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactttcccaaaaaat 6003545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 353 - 554
Target Start/End: Original strand, 34972962 - 34973163
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  |||| |||  |||| ||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  34972962 aaaatagttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaac 34973061  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    ||| |||||| |||||| |||||||||||  |||||||||| |||||| |||||||  | ||||||||||||||||||| ||||| |||| | |||||||    
T  34973062 tcttatccttttgttttaggtcattgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccctataaaatta 34973161  T
Q  553 ga 554  Q
    ||    
T  34973162 ga 34973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 353 - 643
Target Start/End: Original strand, 7931755 - 7932038
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| ||| | || |||||||||  |||| ||||||||||| ||| ||||| |||||| ||||||||||||||||||||||    
T  7931755 aaaacagttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaac 7931854  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||| | ||||||||||||||||||  |||| || || |||||| | ||||| || ||||||| |||||||||| |||||| | |||| ||||| |    
T  7931855 tctcatcc-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttggtcggattgcttcgaaactttcccagaaaatca 7931953  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagac 643  Q
    || |          ||||||| || ||||||| ||||| |||||||||| | ||||||  ||| ||||||  |||||||||||||||||||    
T  7931954 gaaa------aaattcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagac 7932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 38536268 - 38536568
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||||||  |||||||   |||||||  |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38536268 aaaacagttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaac 38536367  T
Q  453 tctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatt 551  Q
    ||||||  || || |||| |||||||||||  |||||||||| ||||||   |||||  | |||||||||||||||| ||| |||| | |||| |||||     
T  38536368 tctcattattctgtttttaggtcattgttacatgttcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactttcccagaaaatc 38536467  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||| |          ||||||| ||  |||||  |||||||||||||||| | ||||||  ||| ||||||  |||||||||||||||||||| ||||||    
T  38536468 agaaa------aaattcaaggaccataactcctttagaaaggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 38536561  T
Q  652 aattttt 658  Q
     ||||||    
T  38536562 cattttt 38536568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 348 - 550
Target Start/End: Original strand, 8106486 - 8106689
Alignment:
Q  348 agggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgga-caatattaatctt 446  Q
    ||||||||| ||||| |||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||| ||||||||||||  || |||| ||||||||    
T  8106486 agggaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatctt 8106585  T
Q  447 cctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaa 546  Q
     ||||||||||||||| ||||||| ||||||||||  |||||||| | ||||||  ||||||||| |||||||||| |||| ||||||||| ||||||||    
T  8106586 tctaactctcatccttctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttccccaaa 8106685  T
Q  547 aaat 550  Q
    ||||    
T  8106686 aaat 8106689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 6228882 - 6228685
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  | | ||||  ||||  || || |||| ||| |||| ||||||| ||||||||||||||||||||||    
T  6228882 aaaatagttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaac 6228783  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||||||||||| || ||| |||||||||||||||  |||| |||| |||||||    
T  6228782 tcttatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttcccaaaaaaat 6228685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 32441908 - 32442105
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| |||||||| || ||||| |||||| |   ||| ||| ||||||| ||| |||  |||||||  |||||||||||||||||||||    
T  32441908 aaaatagttcggattatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaac 32442007  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||| |||||| ||||||||||||||||||  |||||||||| |||||| | ||||| || ||||||||||||||||||| ||||| |||||| |||||    
T  32442008 tcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaacttccccagaaaat 32442105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 426 - 658
Target Start/End: Original strand, 47456771 - 47457002
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcgga 525  Q
    |||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||| | |||||||| ||||||| |||||| || |||||||||| ||    
T  47456771 tttaaggaccatattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggttttcgggctacttgatcaga 47456870  T
Q  526 ttgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatata 625  Q
    |||||||||||| |||||| ||||| ||| ||         |||||||||||||||||  |||||  ||||||||| |  ||||| |||| ||||||  |    
T  47456871 ttgctccgaaacttccccagaaaatcaga-agaaaaaaaaatcaaggatcaagactcctctagaagagacttcttatggaactccgtccctcaaaatcca 47456969  T
Q  626 aaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||||||||| |   |||||||||||||    
T  47456970 aaattccatcgtttaaattcatttttaattttt 47457002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 387 - 658
Target Start/End: Complemental strand, 25539014 - 25538748
Alignment:
Q  387 agcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatg-ttttgggtcattgttagttg 485  Q
    ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||| ||| ||||||||||||||  | ||||||||||||||||  |     
T  25539014 agcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgttacctc 25538915  T
Q  486 ttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccg 585  Q
    |||||||| ||||||| ||||||  | ||||||||| ||||| |||||||||||||||| ||||| ||| |          ||||||| || |||||||     
T  25538914 ttcttagtcaaaaatttggttttcaggctacttgattggatttctccgaaacatccccagaaaatcagaaa------aatttcaaggaacatgactccct 25538821  T
Q  586 tagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||  ||||||||| | ||||||  ||| ||||||  ||||| |||||||||||||  |||||||||||||    
T  25538820 tagaagagacttcttacgggactccgcccctcaaaatccaaaataccatcgtttagacacatttttaattttt 25538748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 550
Target Start/End: Original strand, 52089332 - 52089480
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||| |||||||||||  ||||||||||||| ||||||||| |||| ||| || |||||||||||||||  |||||||||| ||||||     
T  52089332 catgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacctgttcttagtcaaaaatc 52089431  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| |||||||||||||||||| | |||| |||||| |||||    
T  52089432 gggtttttggactacttgatcggattgcttcaaaacttccccagaaaat 52089480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 341 - 536
Target Start/End: Original strand, 7863527 - 7863722
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||| |||||||||||||||| ||||||| ||| ||||   |||||||  |||| ||||||||||| ||| | | |||||||| ||||||||||    
T  7863527 tttttcaaggaaaaaacagttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatatt 7863626  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaa 536  Q
    ||| ||||||||| | |||||| |||||| |||||||| ||  |||||||| ||||||||| |||||| || |||||| ||| |||||||||||||    
T  7863627 aatattcctaacttttatccttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctccgaaa 7863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 377 - 543
Target Start/End: Complemental strand, 27742159 - 27741992
Alignment:
Q  377 gaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgga-caatattaatcttcctaactctcatccttatgttttgggtca 475  Q
    ||||||||  ||||||||   ||| ||||||||||| || |||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  27742159 gaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctgttttgagtca 27742060  T
Q  476 ttgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatcccc 543  Q
    ||| ||  | |||||||| |||||| ||||||| || |||||| ||||||||||||||||||||||||    
T  27742059 ttggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctccgaaacatcccc 27741992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 333 - 537
Target Start/End: Original strand, 37222040 - 37222242
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| ||||||||||||||||||||| ||||||  ||||||||  |||| |||  |||| ||||||||||| ||| |||  || |||| ||    
T  37222040 aacaccctttttc-aagggaaaaacagttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaagg 37222138  T
Q  433 acaatattaa-tcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    || ||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||| | ||  ||| ||||| ||||||||    
T  37222139 accatattaattcttcttaa-tctcatcattctgttttgggtcattgttagttgttcttagtaaaaaattcggttctcggggtac-tgatcagattgctc 37222236  T
Q  532 cgaaac 537  Q
    ||||||    
T  37222237 cgaaac 37222242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 369 - 550
Target Start/End: Complemental strand, 41413151 - 41412970
Alignment:
Q  369 tataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttt 468  Q
    ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||||||||||| | ||||||||||||||||||||||| ||| || |||||    
T  41413151 tataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgttt 41413052  T
Q  469 tgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    | |||||||||||  |||||||| | ||||||  |||||| || |||||||||| ||||| || ||||| ||||||||||||    
T  41413051 taggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttccccaaaaaat 41412970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 46440361 - 46440144
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| | ||  ||||||||  |||| |||| |||||| ||| ||| |||||||| ||    
T  46440361 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttaggg 46440264  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgtta--gttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    |||||| |||||||| |||||||||||||| | |||| | |||||||||    |||||||| | |||||| || |||| || ||||||||||||||||||    
T  46440263 acaatactaatcttcataactctcatccttctcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgct 46440164  T
Q  531 ccgaaacatccccaaaaaat 550  Q
    ||||||| |||||| |||||    
T  46440163 ccgaaacttccccagaaaat 46440144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 333 - 542
Target Start/End: Complemental strand, 55052706 - 55052498
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||| ||| ||||||||||| | ||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  55052706 aacaccctttttcaa--ggtaaaacagttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 55052609  T
Q  433 acaatattaatcttcctaactctcatcctt--atgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    ||||| ||||||||||||||| ||||||||  || |||| |||||||||||  |||||||||| |||||| |  |||| || ||||||||| ||||||||    
T  55052608 acaatgttaatcttcctaactatcatccttccat-tttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgct 55052510  T
Q  531 ccgaaacatccc 542  Q
    ||||||| ||||    
T  55052509 ccgaaacttccc 55052498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 423 - 548
Target Start/End: Original strand, 49397180 - 49397305
Alignment:
Q  423 cattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatc 522  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||  |||||||||| |||||| ||||||| |  ||||||||||    
T  49397180 cattttagggacaatattaatcttcctaactcttatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgggttttcgagctacttgatc 49397279  T
Q  523 ggattgctccgaaacatccccaaaaa 548  Q
    ||||||||| ||||| |||| |||||    
T  49397280 ggattgctctgaaacttcccaaaaaa 49397305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 450 - 689
Target Start/End: Original strand, 29822775 - 29823018
Alignment:
Q  450 aactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaa 549  Q
    ||||||||||||| ||||||||||||||||||  |||||||| | ||||||||| |||| || |||||||||||||||||||  |||| | |||| | ||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttgcccagacaa 29822874  T
Q  550 ttagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattt 649  Q
    | ||| |          ||||||| || ||||||||||||| ||||||| || | |||||   ||| ||||||  |||||||||||||||||||  ||||    
T  29822875 tcagaaa------aaattcaaggaccatgactcccgtagaagggacttcctacgggactctgcccctcaaaattcaaaattccatcgtttagactcattt 29822968  T
Q  650 tt----------aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||          |||||||||||| |||||||||||||||||||||||||    
T  29822969 ttcattttttaaaatttttcatattctcagaaaaatccgaaaaaatttgc 29823018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 346 - 537
Target Start/End: Complemental strand, 14474287 - 14474097
Alignment:
Q  346 caagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatct 445  Q
    |||||||||||||||||  ||| ||||||| ||||||||  | ||||||   | | ||||||||||| ||| |||||| ||| | | |||||||||||||    
T  14474287 caagggaaaaacagttcatattatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaa-gaacaatattaatct 14474189  T
Q  446 tcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaac 537  Q
    ||||||| ||||||||| | |||| |||||||||||  |||||||  | ||||||   |||||    |||||||||||||||||||||||||    
T  14474188 tcctaaccctcatccttctattttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctccgaaac 14474097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 499
Target Start/End: Original strand, 27879649 - 27879792
Alignment:
Q  356 acagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactct 455  Q
    ||||||| |||| ||||||| ||| ||||  ||||||||  || | |||| |||||| |||||| ||||||||| |||| |||||||| |||||||||||    
T  27879649 acagttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactct 27879748  T
Q  456 catccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    |||  || |||||| | |||||||||||||||| |||| |||||    
T  27879749 cataattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 404 - 485
Target Start/End: Original strand, 47784138 - 47784218
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttg 485  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| | | ||||||| ||||||||||||||    
T  47784138 tgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactctcattcatctgttttgagtcattgttagttg 47784218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 481
Target Start/End: Original strand, 47873957 - 47874036
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgtta 481  Q
    ||||||| ||| ||| |||||||||||| ||||||||||||||||| ||| |||||||||| |||||||| |||||||||    
T  47873957 catgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgtta 47874036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 341 - 481
Target Start/End: Complemental strand, 3703330 - 3703190
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||||||||||||||||  | || |||||| | || ||||  ||||||||  |||| ||| ||||||| ||  |||||||||||| | | ||||||    
T  3703330 tttttcaagggaaaaacagttatggttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatatt 3703231  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgtta 481  Q
    ||||||| |||||||||||||| |||||| ||||| |||||    
T  3703230 aatcttcataactctcatccttctgttttaggtcaatgtta 3703190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 567 - 658
Target Start/End: Complemental strand, 5803290 - 5803198
Alignment:
Q  567 tcaaggatcaagactcccg-tagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||||||||||||  ||||| | |||||||| | ||||||| ||||||||||  |||||||||||||||||||| |||||| ||||||    
T  5803290 tcaaggatcaagactccccctagaaggaacttcttatgggactccaccccacaaaattcaaaattccatcgtttagacccatttttcattttt 5803198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 499
Target Start/End: Original strand, 1788175 - 1788238
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    |||||||||||| |||||||||| ||| |||||| ||||||||||| |||||||||||||||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaa 1788238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 4936579 - 4936463
Alignment:
Q  571 ggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatatactcaga 670  Q
    |||||||||||||| |||||   |||||||| | |||||| |||| ||||||  |||||| |||| |||||||| ||||||||||||||  |  |||| |    
T  4936579 ggatcaagactcccttagaagatacttcttatgggactccgtccctcaaaatccaaaatttcatcttttagacccatttttaatttttc--agtctcaaa 4936482  T
Q  671 aaaatccgaaaaaatttgc 689  Q
    |||||||||||||||||||    
T  4936481 aaaatccgaaaaaatttgc 4936463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 537
Target Start/End: Original strand, 20078719 - 20078830
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcgga 525  Q
    |||| |||| |||||||| |||||| ||| ||||||| |||||| |||||||||||||  ||||||||  |||||  ||||||||| ||||||||||  |    
T  20078719 tttaaggaccatattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaa 20078818  T
Q  526 ttgctccgaaac 537  Q
    |||||| |||||    
T  20078819 ttgctctgaaac 20078830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 25140526 - 25140459
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| ||| |||||||| | |||||||||||||||||||||||||||||||| ||||    
T  25140526 catgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctcatccttatctttt 25140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 531
Target Start/End: Complemental strand, 55838978 - 55838883
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||  |||  |||||| |||||| || |||||| | | ||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctc 55838883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 625 - 689
Target Start/End: Complemental strand, 31582233 - 31582166
Alignment:
Q  625 aaaattccatcgtttagacctattttta---atttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||||||||| ||||||    ||||||||||| |||||||||||||||||||||||||    
T  31582233 aaaattccatcgtttagacccatttttttttatttttcatattctcagaaaaatccgaaaaaatttgc 31582166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 25140942 - 25140875
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||| || | |||||| ||||||    
T  25140942 catgtttgtaacatggatagtcattttaaggacaatattaatcttcctagctttgatccttgtgtttt 25140875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 489
Target Start/End: Complemental strand, 42497872 - 42497809
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttct 489  Q
    |||| |||| ||||||||||| |||||||||||| || |||||| |||||||||||||||||||    
T  42497872 tttaaggaccatattaatctttctaactctcatcattttgttttaggtcattgttagttgttct 42497809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 49002873 - 49002822
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactc 454  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  49002873 atgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 531
Target Start/End: Complemental strand, 55774800 - 55774705
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||  |||  |||||| |||||| || |||||| | | ||||||||    
T  55774800 atattaatctccctaactctaatccttatgttttaggtcattattagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctc 55774705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 47874113 - 47874155
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  47874113 tttttaatttttcatattctcagaaaaatccgaaaaaatttgc 47874155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 550
Target Start/End: Complemental strand, 48095853 - 48095739
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||| | ||||| |  |||||| |||||||||||||| || ||||| ||||||  |||||| || |||||| |||  |||||| ||||    
T  48095853 atattaatcttcctaattttcatcatcctgttttaggtcattgttagttatttttagtcaaaaatctggttttcgggctactttatcatattgcttcgaa 48095754  T
Q  536 acatccccaaaaaat 550  Q
    || |||||| |||||    
T  48095753 acttccccataaaat 48095739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 372066 - 372166
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcc--taactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    ||||||| ||| ||| ||||||||||||  ||| |||||||| |||   ||| | |||||||| ||||||||||||||||||||| |||||||| |||||    
T  372066 catgtttataacatggatagtcattttaaagaccatattaatattctcataattttcatccttctgttttgggtcattgttagttcttcttagtcaaaaa 372165  T
Q  500 t 500  Q
    |    
T  372166 t 372166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 37770079 - 37769982
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaat 500  Q
    |||||||||| ||||||||||| ||||  ||| |||||||||| |||||||||| ||||| | ||||  |||||||||||  ||| ||||| ||||||    
T  37770079 atgtttgtaacatgaatagtcaatttaatgaccatattaatctccctaactctcgtccttttattttaagtcattgttagcagtttttagttaaaaat 37769982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 42660395 - 42660338
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatc 459  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||| || |||||    
T  42660395 catgtttgtaatattgatagtcattttaaggacaatattaatcttcctagctttcatc 42660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 466 - 658
Target Start/End: Complemental strand, 49001516 - 49001325
Alignment:
Q  466 ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnn 565  Q
    ||||||||||||||||  ||||| |||| ||||||  | |||| || ||||||||||||||||||||||||  || ||| ||||| ||| ||            
T  49001516 ttttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctccgaaaattctccagaaaatcaga-agaaaaaaaa 49001418  T
Q  566 ntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
      ||||||||| ||||||| ||||| |||||||||| | ||||||   || ||||||  |||||| ||||||||||| ||||| || ||||||    
T  49001417 aacaaggatcatgactcccttagaagggacttcttacgggactccgctcctcaaaatccaaaattacatcgtttagatctattcttcattttt 49001325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 25140735 - 25140675
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctt 462  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||| || ||||||||    
T  25140735 catgtttgtaacatggatagtcattttgaggacaatattaatcttcctagctttcatcctt 25140675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 689
Target Start/End: Complemental strand, 42497795 - 42497668
Alignment:
Q  568 caaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt------aatttttcat 661  Q
    ||||||||||||||||| | ||| || |||||||   ||||||  ||| |||||| ||||||| ||| ||||||||||||||||      |||||||||     
T  42497795 caaggatcaagactcccatggaaggggcttcttacaggactccgcccctcaaaatctaaaatttcattgtttagacctattttttttttgaatttttcac 42497696  T
Q  662 atactcagaaaaatccgaaaaaatttgc 689  Q
    || ||| |||||||| ||||||||||||    
T  42497695 attctctgaaaaatcagaaaaaatttgc 42497668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 567 - 658
Target Start/End: Complemental strand, 3703116 - 3703025
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||| ||||| ||||||| |||||| ||||||||| | |||||| |||  ||||||  ||||||||||||||| |||| |||||| ||||||    
T  3703116 tcaaagatcatgactcccttagaaatgacttcttatgggactccgtccttcaaaatccaaaattccatcgtttggacccatttttcattttt 3703025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 38417020 - 38417091
Alignment:
Q  483 ttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattaga 554  Q
    ||||||||||| |||||| ||||||| |  ||||||||||||| |||||  |||| ||||||||||||||||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttccccaaaaaattaga 38417091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 647 - 686
Target Start/End: Complemental strand, 54631261 - 54631222
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatt 686  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  54631261 tttttaatttttcatattctcagaaaaatccgaaaaaatt 54631222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 406 - 537
Target Start/End: Complemental strand, 55138164 - 55138033
Alignment:
Q  406 tttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggt 505  Q
    ||||||||||| ||||||| ||||  ||| |||||||||||||||| | | ||| || |||||  ||| |||||| |||||||| ||| ||||||| |||    
T  55138164 tttgtaatatggatagtcagtttaaagactatattaatcttcctaaattttatctttctgtttaaggttattgtttgttgttctcagtcaaaaattcggt 55138065  T
Q  506 ttttggcctacttgatcggattgctccgaaac 537  Q
    ||| |  ||| ||||||  |||| ||||||||    
T  55138064 tttcgtgctatttgatcatattgatccgaaac 55138033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 3703020 - 3702978
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  3703020 ttttttatttttcatattctcagaaaaatccgaaaaaatttgc 3702978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 46381164 - 46381090
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaat 500  Q
    |||| |||| |||||||||||| |||||||||| |||  ||||| | |||||||||||| |||||||| ||||||    
T  46381164 tttaaggaccatattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaat 46381090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 485
Target Start/End: Complemental strand, 48629542 - 48629497
Alignment:
Q  440 taatcttcctaactctcatccttatgttttgggtcattgttagttg 485  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||    
T  48629542 taatcttcctaactcacatccttctgttttaggtcattgttagttg 48629497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 689
Target Start/End: Complemental strand, 27741878 - 27741834
Alignment:
Q  645 tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  27741878 tatttttaatttttcatattctcagaaaaatccaaaaatatttgc 27741834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 27181540 - 27181474
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| ||||||||||||   | ||||||||||| |||||||||||||||| ||||||    
T  27181540 catgtttgtaacatggatagtcattttaaaaataatattaatct-cctaactctcatccttgtgtttt 27181474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 487
Target Start/End: Original strand, 51515736 - 51515787
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgtt 487  Q
    ||||||||||| |  |||||||||||| |||||| |||||||||||||||||    
T  51515736 atattaatctttcagactctcatccttttgttttaggtcattgttagttgtt 51515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 658
Target Start/End: Complemental strand, 53893875 - 53893796
Alignment:
Q  579 actcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||||| |||||||||| | | ||||  ||| ||||||  |||||| ||||||||||||| |||||| ||||||    
T  53893875 actcccgtagaagggacttcttatgggtctccgcccctcaaaatccaaaatttcatcgtttagacccatttttcattttt 53893796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 18050958 - 18050916
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| |||||||||||| ||||||||||||| |||||||||||    
T  18050958 ttttcaatttttcatattctcagaaaaatccaaaaaaatttgc 18050916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 683
Target Start/End: Original strand, 27879890 - 27879928
Alignment:
Q  645 tatttttaatttttcatatactcagaaaaatccgaaaaa 683  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  27879890 tatttttaatttttcatattctcagaaaaatctgaaaaa 27879928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 350 - 488
Target Start/End: Original strand, 32600935 - 32601073
Alignment:
Q  350 ggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcct 449  Q
    ||||||||||||| |||| ||| ||  ||||||||  ||||||||  || | |||| |||||| |||   |||||||||| |||| |||||||| |||||    
T  32600935 ggaaaaacagttcagattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggaccatattaatattcct 32601034  T
Q  450 aactctcatccttatgttttgggtcattgttagttgttc 488  Q
    | ||| |||  || |||||| |  |||||||||||||||    
T  32601035 acctcgcataattctgttttagaacattgttagttgttc 32601073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 536
Target Start/End: Complemental strand, 4936675 - 4936614
Alignment:
Q  475 attgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaa 536  Q
    |||||||| |||||||||| ||||||  | ||||||| ||| |||||||||||||||| |||    
T  4936675 attgttagctgttcttagttaaaaatctgatttttgggctatttgatcggattgctccaaaa 4936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 658
Target Start/End: Original strand, 32601202 - 32601235
Alignment:
Q  625 aaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||||||||||||||||||||| ||||||    
T  32601202 aaaattccatcgtttagacctatttttcattttt 32601235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 333 - 684
Target Start/End: Complemental strand, 37183869 - 37183527
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    |||||||||||| ||||| |||| ||||  ||||| ||||||| ||| ||||  | ||||||  ||||  |||||||||| ||| |||||||||||||||    
T  37183869 aacacccttttttcaaggcaaaa-cagtctggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatgg 37183771  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||| |||||||  | ||||||||||||||||||||    
T  37183770 acaatattaatcttcctaactctcatctttttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctcc 37183671  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    |||||||||||| ||||| ||| |          ||||||| || ||||||||||||| |||| ||||| | ||||||  ||| ||||||  ||||||||    
T  37183670 gaaacatccccataaaatcagaaa------aaattcaaggaccatgactcccgtagaagggacatcttacgggactccgcccctcaaaatccaaaattcc 37183577  T
Q  633 atcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaa 684  Q
    ||| |||||||| |  ||| ||||||||||| ||||||||||| ||||||||    
T  37183576 atcatttagaccca--tttgatttttcatattctcagaaaaattcgaaaaaa 37183527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 333 - 673
Target Start/End: Complemental strand, 32842059 - 32841725
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||||||  ||||||||   ||| ||||||||||| ||| |||||||||||| ||    
T  32842059 aacaccctttttc-aagggaaaaacagttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttaggg 32841961  T
Q  433 a-caatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    | ||||||||||||||||||||||||||||| | ||||| ||||||||||  ||||| |||| |||||| ||||||| || |||||||||||||||||||    
T  32841960 aacaatattaatcttcctaactctcatccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctc 32841861  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
    ||||| || |||| ||||| ||| |          |||||||||| ||||||| ||||| |||||||||| | ||||||  ||| ||||||  |||||||    
T  32841860 cgaaa-attcccagaaaatcagaaa------aaattcaaggatcatgactcccctagaagggacttcttatgggactccgcccctcaaaatccaaaattc 32841768  T
Q  632 catcgtttagacctatttttaattt-ttcatatactcagaaaa 673  Q
    ||||||||||||| ||||||  ||| ||||||| |||||||||    
T  32841767 catcgtttagacccattttttttttcttcatattctcagaaaa 32841725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 6156783 - 6157082
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||| ||||||||| |||||| |||||||||  |||| |||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  6156783 aaaaccgttcggattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 6156882  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| |||||| |||||||||||  |||||||||| |||||  |||||||||| ||||||||||||||||||||||||| | |||| ||||| |    
T  6156883 tctcatccttctgtttttggtcattgttacatgttcttagttaaaaaccgggtttttgggctacttgatcggattgctccgaaactttcccagaaaatca 6156982  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||||||| | |||||||||| | ||||||  ||| ||||||  |||||||||||||||||||| ||||||     
T  6156983 gaaa------aaattcaaggaccatgactcccgtagtagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttt 6157076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 333 - 689
Target Start/End: Complemental strand, 31221426 - 31221067
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| |||||||| || ||||  ||||||||   ||| ||||||||||| ||| |||||||||||| ||    
T  31221426 aacaccctttttcaa--ggtaaaacagttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttaggg 31221329  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||  |||||||||| ||||| |||||||| || ||||||||||||||||||||    
T  31221328 acaatattaatcttcctaactctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctcc 31221229  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| ||| |          ||||||| |  |||| || ||||| |||||||||| ||||||||  ||| ||||||  |||||| |    
T  31221228 gaaacttccccagaaaatcagaaa------aaattcaaggaccgtgacttccatagaagggacttcttacgagactccgcccctcaaaatccaaaatttc 31221135  T
Q  633 atcgtttagacc-----------tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||           | ||||||||||||||||| | |||||||||||||||||||||||    
T  31221134 atcgtttagaccatttttcattttttttttaatttttcatattcacagaaaaatccgaaaaaatttgc 31221067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 333 - 688
Target Start/End: Original strand, 39524810 - 39525150
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  | ||||||  |||| ||| ||||||||||| |||||||||||| |     
T  39524810 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagtcattttagga 39524907  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||| |  |||||||||| |||||||||    
T  39524908 acaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctcc 39525007  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||  |||||| ||||| ||| |          ||||||| || ||||||| ||||| | |||||||  | |||||   ||| ||||||  ||||||||    
T  39525008 gaaatttccccagaaaatcagaaa------aaattcaaggaccatgactcccttagaaggaacttcttgtgggactctgcccctcaaaatccaaaattcc 39525101  T
Q  633 atcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttg 688  Q
    ||||||||||||       |||||||||||| |||| |||||||||||||||||||    
T  39525102 atcgtttagacc-------aatttttcatattctcataaaaatccgaaaaaatttg 39525150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 38871723 - 38871920
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  38871723 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaac 38871822  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||| |||||||  | |||||| |||||||||||||||||| | |||| |||||    
T  38871823 tctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctccgaaactttcccagaaaat 38871920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 33487662 - 33488004
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  ||||  |||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  33487662 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 33487761  T
Q  453 tctcatcctt-atgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatt 551  Q
    |||||||||| |  ||||||||||||||||  |||||||||| |||||| | ||||| || |||||||||||  |||||||||||| |||||| |||||     
T  33487762 tctcatccttcagtttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttccccagaaaatc 33487861  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||| |          |||||||||| ||||||| ||||| |||||||||  | ||| ||  |||  |||||  |||||||||||||||||||| ||||||    
T  33487862 agaaa------aaagtcaaggatcatgactcccttagaagggacttcttttgggaccccgcccctaaaaatccaaaattccatcgtttagacccattttt 33487955  T
Q  652 -----------aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
               |||||||||||| |||||||||||||||||||||||||    
T  33487956 ttttttttttaaatttttcatattctcagaaaaatccgaaaaaatttgc 33488004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 341 - 554
Target Start/End: Original strand, 13908588 - 13908801
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  | || |||   ||| ||||||||||| | | |||||||||||||||||||||||    
T  13908588 tttttcaagggaaaaacagttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatatt 13908687  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatc 540  Q
    ||||||| ||||  |||||||| | ||||| ||||||||||| ||||||| || ||||||  ||||||  | |||||||||||||||||||||||| |||    
T  13908688 aatcttcttaaccttcatccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactacttgatcggattgctccgaaatatc 13908787  T
Q  541 cccaaaaaattaga 554  Q
    ||||||||||||||    
T  13908788 cccaaaaaattaga 13908801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 333 - 549
Target Start/End: Original strand, 20891647 - 20891861
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  20891647 aacaccctttttcaa--ggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 20891744  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    | |||||||||||||||||||||||||||| |||||||||| |||||||  | |||||||| |||||| |||||||  | ||||||||||||||||||||    
T  20891745 ataatattaatcttcctaactctcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggttttcaggctacttgatcggattgctcc 20891844  T
Q  533 gaaacatccccaaaaaa 549  Q
    ||||| |||||| ||||    
T  20891845 gaaacttccccagaaaa 20891861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 15799277 - 15799616
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||| ||| |||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||     
T  15799277 aaaacatttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaat 15799376  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    || ||||||| ||||||||||||||||||  |||||||||| |||||| ||||||  || |||||||| |||||||||||||||| | |||| ||||| |    
T  15799377 tcgcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttccgggctacttgaccggattgctccgaaacttgcccagaaaatca 15799476  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttt-- 650  Q
     | |          ||||||| || | ||||| ||||| |||||||  | | ||||||| ||| ||||||  |||||||||||||||||||| |||||      
T  15799477 aaaa------aaattcaaggaccatgcctcccctagaagggacttccaatgggactccacccctcaaaatccaaaattccatcgtttagaccaattttta 15799570  T
Q  651 -------taatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
           |||||||||||||  ||||||||||||||||||||||||    
T  15799571 atttttttaatttttcatattttcagaaaaatccgaaaaaatttgc 15799616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 31929193 - 31928895
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| ||| ||||  ||||||||   ||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  31929193 aaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcatttta-ggacaatattaatcttcctaac 31929095  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| ||||||| ||||||||||  |||||||||| |||||   |||||| || ||||||||||||||||||||||||| |||||| ||||| |    
T  31929094 tctcatccttctgttttgagtcattgttacctgttcttagttaaaaaccaggttttcgggctacttgatcggattgctccgaaacttccccagaaaatca 31928995  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||| ||||| |||||||||  | ||||||  ||  ||||||  |||||| ||||||||||||| ||||||     
T  31928994 gaaa------aaattcaaggaccatgactcccttagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatcgtttagacccatttttc 31928901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 38692870 - 38692655
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| ||| |||||||| ||    
T  38692870 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttaagg 38692773  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||| ||| ||||||||||| || ||||||||||||||||||    |||||||| |||||| ||||||| || ||||||| ||||||||||||    
T  38692772 acaatattaatattcataactctcatctttctgttttgggtcattgttacccattcttagtcaaaaatcgggttttcggactacttggtcggattgctcc 38692673  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||| ||||||||||||    
T  38692672 gaaacttccccaaaaaat 38692655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 353 - 689
Target Start/End: Original strand, 7884245 - 7884586
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||| ||| ||||||| ||| ||||  | ||||||  ||||  |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  7884245 aaaacagttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaac 7884344  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatcccc-aaaaaatt 551  Q
    |||||||||| ||||||||||||||||||  |||||||||| || ||| || |||| || ||||||||||||||||||||||||| ||||| | |||||     
T  7884345 tctcatccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccctataaaatc 7884444  T
Q  552 agagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||| |          ||||||| || |||||||||||||  ||||||||| |  |||||  ||| |||||| ||||||| ||| ||||||||| ||||||    
T  7884445 agaaa------acattcaaggaccatgactcccgtagaagagacttcttacggaactccgcccctcaaaatctaaaatttcattgtttagacccattttt 7884538  T
Q  652 ----------aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
              ||||||||||||  ||||||||||||||||||||||||    
T  7884539 catttttttaaatttttcatattttcagaaaaatccgaaaaaatttgc 7884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 403 - 651
Target Start/End: Original strand, 14111969 - 14112209
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattg 502  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| |||||| |    
T  14111969 atgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttat--tttgggttattgttacttgttcttagtcaaaaatcg 14112066  T
Q  503 ggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaa 602  Q
    |||||| || ||||||||| ||||||||||||||| |||||| ||||| ||| |          ||||||| || || |||| ||||| ||||||||||     
T  14112067 ggttttcggactacttgataggattgctccgaaacttccccagaaaatcagaaa------aaattcaaggaccatgaatcccatagaagggacttcttac 14112160  T
Q  603 gagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    | ||||||  ||| ||||||  |||||||||||||||||||| ||||||    
T  14112161 gggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 14112209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 341 - 550
Target Start/End: Original strand, 26095132 - 26095341
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| ||| ||||||| |||||||||| ||||||| ||||||||  | || |||  |||| ||||||||||| ||| |||||||| ||||||||||||||    
T  26095132 tttttcaaaggaaaaatagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatatt 26095231  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatc 540  Q
    ||||||| |||||||||| ||| | ||||| ||||||||| | |||| | |||||||||| |||||||||| ||||||| || |||||||||||||| ||    
T  26095232 aatcttcttaactctcattcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttc 26095331  T
Q  541 cccaaaaaat 550  Q
    |||| |||||    
T  26095332 cccagaaaat 26095341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 28083447 - 28083250
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||| |||||| ||||||||||| ||||  ||||||||   ||| ||| ||||||| ||| |||||||||||| |||||||||||||||| |||||    
T  28083447 aaaacagtccggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaac 28083348  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    | |||||||| |||||| |||||||||||  ||||||||| ||||||| | ||||| || |||||||||||||||||||||| || |||||| |||||    
T  28083347 tttcatccttctgtttttggtcattgttacctgttcttaggaaaaaatcgagttttcggactacttgatcggattgctccgatacttccccagaaaat 28083250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 333 - 550
Target Start/End: Complemental strand, 4064807 - 4064591
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||| ||| ||||||||||| | ||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||    
T  4064807 aacaccctttttcaa--ggtaaaacagttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 4064710  T
Q  433 acaatattaatcttcctaactctcatccttat-gttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    ||||| ||||||||||||||| |||||||| |  ||||||||||||||||  |||||||||| |||||| |  |||| || ||||||||| |||||||||    
T  4064709 acaatgttaatcttcctaactatcatccttctatttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctc 4064610  T
Q  532 cgaaacatccccaaaaaat 550  Q
    |||||| |||||| |||||    
T  4064609 cgaaacttccccagaaaat 4064591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 387 - 550
Target Start/End: Complemental strand, 12465154 - 12464991
Alignment:
Q  387 agcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgt 486  Q
    ||||||||  |||| ||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||||| |||||| |||||||| ||||||||| ||||    
T  12465154 agcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatccttttgttttggatcattgttacttgt 12465055  T
Q  487 tcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||| |||||| |||||||  | ||||||||||||||||||| |||||  |||||||||||    
T  12465054 tcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactaccccaaaaaat 12464991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 348 - 542
Target Start/End: Complemental strand, 24203758 - 24203564
Alignment:
Q  348 agggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttc 447  Q
    |||| |||||||||||| || ||||||||||| ||||  |||| |||  |||| |||||||||||   | ||| |||||||| ||||||||||||| |||    
T  24203758 agggtaaaacagttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttc 24203659  T
Q  448 ctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccc 542  Q
    |||||||||| |||| |||||||| |||||||||  |||||||||| |||||||| ||||| || ||| ||||||||||||||||||||| ||||    
T  24203658 ctaactctcaaccttctgttttggatcattgttacctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttccc 24203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 15957801 - 15957998
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||| ||||| ||||||| ||| ||||  || |||||  |||| ||||||||||| ||  ||||| |||||| ||||||||||||||||||||||    
T  15957801 aaaacagtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaac 15957900  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||  | ||| |||||||||||||| |||  |||||||||| ||||||  |||||| || ||||||||||||||||||||||||| |||||| |||||    
T  15957901 tctggttcttttgttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttccccagaaaat 15957998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 347 - 550
Target Start/End: Complemental strand, 40613750 - 40613547
Alignment:
Q  347 aagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatctt 446  Q
    ||||||||||||||||||||| ||||||||||| ||||  |||| |||   | | ||||||||||| ||| ||| | |||||| ||||| ||||||||||    
T  40613750 aagggaaaaacagttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatctt 40613651  T
Q  447 cctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaa 546  Q
    ||||||| |||||||||||| || |||||||| ||  |||||||||| ||||||   |||||||  |||||||||| |||||||||||||| ||| ||||    
T  40613650 cctaactttcatccttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaacttcctcaaa 40613551  T
Q  547 aaat 550  Q
    ||||    
T  40613550 aaat 40613547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 542
Target Start/End: Original strand, 29862664 - 29862854
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||| ||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  29862664 aaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 29862763  T
Q  453 tctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccc 542  Q
    | ||||||||  | |||||||||||| |||  |||||||||| ||||||   ||||| || |||||||||  |||||||||||||| ||||    
T  29862764 tttcatccttccgtttttgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccc 29862854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 353 - 544
Target Start/End: Original strand, 38372361 - 38372544
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||||| |||| ||||||||||| |||| |||||||||  |||| ||||||||| | ||| |||||||||||| ||||||||||||||||||||||    
T  38372361 aaaacagttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaac 38372460  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatcccca 544  Q
    ||||||  ||         ||||||||||  |||||||||| |||||||||||||| || |||||||||||||| |||||||||| ||||||    
T  38372461 tctcataatt--------cgtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatcggatcgctccgaaacttcccca 38372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 340 - 544
Target Start/End: Original strand, 12847482 - 12847686
Alignment:
Q  340 tttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatat 439  Q
    ||||| |||| |||||||||||||| ||  |||||||||| ||||  ||||||||  || | ||||||||||| ||  ||| ||||||||||||||||||    
T  12847482 ttttttcaagtgaaaaacagttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatat 12847581  T
Q  440 taatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacat 539  Q
    ||||||||| ||||||| |  || |||||||| |||||||||| |||||||||| |||||| | ||||| || ||||||||||  ||| ||| ||||| |    
T  12847582 taatcttcccaactctcgtatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaactt 12847681  T
Q  540 cccca 544  Q
    |||||    
T  12847682 cccca 12847686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 402 - 550
Target Start/End: Original strand, 23269438 - 23269586
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||| ||| | || ||||| || ||||| |||||||| | ||||||     
T  23269438 catgtttgtaacatgaacaatcattttaaggacaatattaatcttcctaactctcattcttctattctgggttatagttagatgttcttattcaaaaatc 23269537  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||| || |||||||||||||||||| |||||| |||||| |||||    
T  23269538 gggttttcgggctacttgatcggattgcttcgaaacttccccagaaaat 23269586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 435 - 550
Target Start/End: Complemental strand, 26898790 - 26898675
Alignment:
Q  435 aatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccga 534  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||| | ||||| || ||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccga 26898691  T
Q  535 aacatccccaaaaaat 550  Q
    ||| | ||||||||||    
T  26898690 aacttgcccaaaaaat 26898675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 331 - 689
Target Start/End: Original strand, 27212740 - 27213086
Alignment:
Q  331 tgaacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttat 430  Q
    ||||||||||||||  ||||||||||||||||||||| |||||| |||| | ||  || |||||   ||| ||||||||||| ||  ||||||||         
T  27212740 tgaacaccctttttg-aagggaaaaacagttcggattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagtcat----- 27212833  T
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    | |||||||||||||||||||||||||||||| || |||| ||||||||||  |||||||||| |||||| ||||||| || ||| ||||| ||||||||    
T  27212834 gaacaatattaatcttcctaactctcatccttctggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgct 27212933  T
Q  531 ccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaatt 630  Q
    |||| || |||| | ||||| ||| |          |||| |  || ||||||| ||||| |||||||||| | ||||||  ||| |||||| |||||||    
T  27212934 ccgatacttccctagaaaatcagaaa-------aattcaacgtccatgactcccctagaagggacttcttacgggactccgcccctcaaaatctaaaatt 27213026  T
Q  631 ccatcgtttaga-cctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||| ||||||| ||| |||  ||   || |||| || ||||||||||||||||||||||    
T  27213027 ccattgtttagaccctttttaaaaaaatttatattcttagaaaaatccgaaaaaatttgc 27213086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 550
Target Start/End: Original strand, 27158136 - 27158333
Alignment:
Q  352 aaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaa 451  Q
    ||||||||| |||||| ||||||| ||| ||||  ||||||||   | | |||||||| || ||| |||||||||||| |||||||||||| ||||||||    
T  27158136 aaaaacagt-cggattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaa 27158234  T
Q  452 ctctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
      |||||||||   |||||||||||| ||||||||| ||| ||||||||| ||||||  | |||||||||| |||||||||||||| | |||| |||||    
T  27158235 tcctcatccttcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctccgaaactttcccagaaaat 27158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 364 - 689
Target Start/End: Complemental strand, 40620048 - 40619715
Alignment:
Q  364 gattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcat-cctt 462  Q
    |||| ||||||||||||||||  || |||||  |||| |||| |||||| ||| | | |||||||| |||||||||||||||||||||||||||| ||||    
T  40620048 gattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccctt 40619949  T
Q  463 atgttttgggtcattgttagttgttc----ttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagn 558  Q
     ||||||||||||||||||  |||||    ||||| |||||| ||||||  || ||||||| |||||||| |||||||| |||| | ||||| | | |      
T  40619948 ctgttttgggtcattgttacctgttcttaattagtcaaaaatcgggtttccggactacttggtcggattgttccgaaacttccctagaaaatcataaa-- 40619851  T
Q  559 nnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc---------tattt 649  Q
            |||||||||| ||||||   |||| | |||||||| | ||||||  ||| ||||||  ||||||||||| ||||||||          ||||    
T  40619850 ----aaattcaaggatcatgactccaaaagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcatttagacccatttttttaattt 40619755  T
Q  650 ttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  40619754 ttaatttttcatattctcagaaaaatctgaaaaaatttgc 40619715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 402 - 550
Target Start/End: Complemental strand, 6800947 - 6800799
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    |||||||| || ||| | |||||||||| |||||||  |||||||||| | |||||||||| |||||| |||||||||||| |||||||||| ||||||     
T  6800947 catgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatccttctgttttaggtcattgttagatgttcttagtcaaaaatc 6800848  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
     |||||| |  ||||||||||  ||||||||||||| | ||||||||||    
T  6800847 cggttttcgaactacttgatcatattgctccgaaacttgcccaaaaaat 6800799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 402 - 689
Target Start/End: Original strand, 26093547 - 26093850
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttat----------gttttgggtcattgttagttgttctta 491  Q
    ||||||| ||| ||| ||||||||||||||||||| |||||||||| |||||||||||||| |          |||||||||||||||||||||||||||    
T  26093547 catgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctcatccttctgttttgggtggttttgggtcattgttagttgttctta 26093646  T
Q  492 gtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaa 591  Q
    || |||||||| |||||  | ||| |||| | ||||||  |||||| ||| || ||||| ||| |          ||||||||||| |||||||||||      
T  26093647 gtcaaaaattgagttttcaggctatttgaacagattgcctcgaaacttcctcacaaaatcagaaa---aaaaaaatcaaggatcaaaactcccgtagagg 26093743  T
Q  592 ggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatt--------tttaa-tttttcatatactcagaaaaatccgaaaa 682  Q
    |||||||||| | ||||||  ||| ||||||  ||||||||||| |||||||| |||        ||||| |||||||||| ||||||||||||| ||||    
T  26093744 ggacttcttacgggactcctcccctcaaaatccaaaattccatcatttagacccattttcatttctttaattttttcatattctcagaaaaatccaaaaa 26093843  T
Q  683 aatttgc 689  Q
    |||||||    
T  26093844 aatttgc 26093850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 499
Target Start/End: Complemental strand, 41639563 - 41639416
Alignment:
Q  352 aaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaa 451  Q
    |||||||||| ||||| ||||||||||| ||||  ||||||||  || |   ||||||||| ||  |||  || ||||  |||||||||||| | |||||    
T  41639563 aaaaacagtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaa 41639464  T
Q  452 ctctcatccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||    
T  41639463 ctctcatctttttgttttaggtcattgttagttgttcttagtaaaaaa 41639416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 353 - 444
Target Start/End: Original strand, 25747077 - 25747168
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatc 444  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| |||||| |||||||    
T  25747077 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 542
Target Start/End: Original strand, 33901094 - 33901200
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||||||  |||||| | |||| ||||||||||||||||| ||||| ||||||| | ||||  | ||| |||||| ||||||||||||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  536 acatccc 542  Q
    || ||||    
T  33901194 acttccc 33901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 347 - 651
Target Start/End: Original strand, 41253346 - 41253650
Alignment:
Q  347 aagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatctt 446  Q
    |||| ||||| | |||||||| |||||| |||| ||||| ||||| ||   | | | ||||||||| |||||||   | |||| | || |||||||||||    
T  41253346 aaggaaaaaataattcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatctt 41253445  T
Q  447 cctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaa 546  Q
    ||||||| |||||||  |||||| |||||||||||||||||| || ||||||||     ||  || | |||||||| |||||||||||||| | | ||||    
T  41253446 cctaactatcatcctcctgttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctccgaaactttcacaaa 41253545  T
Q  547 aaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagaccta 646  Q
    | |  |||            |||||||||||||||||| |||||  |||||||| |||||||||  ||  |||||| ||||||| ||||||||||||| |    
T  41253546 atacgagaagaaggaaaaaatcaaggatcaagactcccttagaagagacttctttagagactccgaccttcaaaatctaaaatttcatcgtttagaccca 41253645  T
Q  647 ttttt 651  Q
    |||||    
T  41253646 ttttt 41253650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 8739208 - 8739148
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctt 462  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  8739208 catgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatcctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 431 - 550
Target Start/End: Original strand, 26622242 - 26622359
Alignment:
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    |||| ||||||| |||||||||| |||||||| | |||| ||| ||||||||||||  ||||| ||||||  |||||| || |||||||||| |||||||    
T  26622242 ggaccatattaaacttcctaactttcatccttctattttaggttattgttagttgt--ttagtcaaaaatccggttttcggactacttgatcagattgct 26622339  T
Q  531 ccgaaacatccccaaaaaat 550  Q
    ||||||| ||| || |||||    
T  26622340 ccgaaacttcctcagaaaat 26622359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 8973629 - 8973562
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| ||| |||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  8973629 catgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatccttgtgtttt 8973562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 16429383 - 16429450
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||| |||||| |||||| ||||||    
T  16429383 catgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactcttatccttgtgtttt 16429450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 28445229 - 28445162
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  28445229 catgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatccttgtgtttt 28445162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 8739005 - 8738947
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcc 460  Q
    ||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||    
T  8739005 catgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctcatcc 8738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 550
Target Start/End: Complemental strand, 11186161 - 11186048
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||| ||| | |||||||||||| |||||| ||| |||||||| |||||||||||||||||| || ||||   |||||||||  ||||||||||||    
T  11186161 atattaattttcttgactctcatccttctgttttaggtaattgttagatgttcttagtaaaaaattcgg-ttttcaactacttgattagattgctccgaa 11186063  T
Q  536 acatccccaaaaaat 550  Q
    || || ||| |||||    
T  11186062 acttctccagaaaat 11186048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 567 - 689
Target Start/End: Complemental strand, 11186048 - 11185915
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt-------- 658  Q
    |||||||||| ||||||||| ||| |||||||||| || |||||  ||| ||||||  ||||||| |||||||||||| |||||| ||||||            
T  11186048 tcaaggatcaggactcccgttgaagggacttcttacgatactccgcccctcaaaattcaaaattcaatcgtttagacccatttttcattttttttttatt 11185949  T
Q  659 ---catatactcagaaaaatccgaaaaaatttgc 689  Q
       ||||| |||||||||||||||||||||||||    
T  11185948 tctcatattctcagaaaaatccgaaaaaatttgc 11185915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 674
Target Start/End: Original strand, 19027337 - 19027416
Alignment:
Q  595 cttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatatactcagaaaaa 674  Q
    ||||||| |||||| || ||| ||||||  ||||||  ||||||||||||||||||||||||||||||| ||||| ||||    
T  19027337 cttcttacgagacttcacccctcaaaatccaaaattatatcgtttagacctatttttaatttttcatattctcaggaaaa 19027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 658
Target Start/End: Complemental strand, 26190260 - 26190092
Alignment:
Q  484 tgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcc 583  Q
    |||||||||| |||||| ||||||| || ||||| ||||||||||||| ||||| |||||||||||| | | |          |||| || || ||||||    
T  26190260 tgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttccccaaaaaatcaaaaa------aaattcaacgaccatgactcc 26190167  T
Q  584 cgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    | ||||| | |||||||||| ||||||  ||| ||||||  |||||||||| ||||||||| |||||| ||||||    
T  26190166 cctagaaggaacttcttaagggactccgcccctcaaaatccaaaattccattgtttagacccatttttcattttt 26190092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 34530316 - 34530383
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  34530316 catgtttgtaacatggttagtcattttaaggacaatattaatcttcctaactttcatcattgtgtttt 34530383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 353 - 455
Target Start/End: Complemental strand, 26190367 - 26190265
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||| ||||||| ||| |||| ||||||| ||| ||| ||||| ||||||||    
T  26190367 aaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaac 26190268  T
Q  453 tct 455  Q
    |||    
T  26190267 tct 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 550
Target Start/End: Original strand, 3435403 - 3435504
Alignment:
Q  449 taactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaa 548  Q
    ||||| ||||||||||||||| |||||||||||| |||| | | | ||||||| | ||||||| |||||| ||  |||||||  ||||| ||||||||||    
T  3435403 taactttcatccttatgttttaggtcattgttagatgttttcaatcaaaaatttgatttttggactactttatgagattgctttgaaacttccccaaaaa 3435502  T
Q  549 at 550  Q
    ||    
T  3435503 at 3435504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 331
Target Start/End: Original strand, 27157942 - 27158090
Alignment:
Q  182 taaatctttcaaaaatgcctttgaacaatttggattttaaaatccaaattcatgttttccctgcgttatagggtgaaaaaattagttcttcctcaattcg 281  Q
    ||||| ||||||||||||| |||   ||||||||||||||||||| || | | ||| | |||  |||||||||||||||| | |||| ||| | ||||||    
T  27157942 taaatttttcaaaaatgcccttgtgaaatttggattttaaaatccgaactga-gttgttcctttgttatagggtgaaaaattgagtttttcataaattcg 27158040  T
Q  282 aattttataagccgaaaacttcaaaaaatatggcgctttacttgattttt 331  Q
     ||||||||| || ||||| ||||||| ||||| ||  |||||| |||||    
T  27158041 gattttataatccaaaaacgtcaaaaattatggtgcgctacttgtttttt 27158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 346 - 489
Target Start/End: Complemental strand, 4028054 - 4027910
Alignment:
Q  346 caagggaaaaacagttcggattttat-aatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatc 444  Q
    |||||||||||||||||||||| ||| |||||||||||||  ||||||||   |||   ||||||||||||||||| | | | || |||| | |||||||    
T  4028054 caagggaaaaacagttcggattatataaatccgaattgtatcagcacaaattataagtttgtttgtaatatgaatattgagtgtaaggaccacattaatc 4027955  T
Q  445 ttcctaactctcatccttatgttttgggtcattgttagttgttct 489  Q
    ||  ||||| | ||| |   ||||| |||||||||||||||||||    
T  4027954 tttataacttttatcatccagttttaggtcattgttagttgttct 4027910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 550
Target Start/End: Original strand, 21070483 - 21070614
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagt---aaaaaattgggtttttggcct 514  Q
    |||||||||||| ||||||||||||||||| |||| ||||||| | | |||    |||||||||| |||| |||||   |||||||  ||||||    ||    
T  21070483 atagtcattttaaggacaatattaatcttcataaccctcatccatttattt----tcattgttagctgtttttagtaaaaaaaaatccggttttcatgct 21070578  T
Q  515 acttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||| |||||||| |||||| ||||||||||||    
T  21070579 acttgattggattgcttcgaaacttccccaaaaaat 21070614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 27494178 - 27494106
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||| ||| ||||||| ||| |||||||||||| |||||||||||||||||||||| | | ||||| ||||||    
T  27494178 ctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaacccccgtccttgtgtttt 27494106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 1350393 - 1350290
Alignment:
Q  339 ctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaata 438  Q
    |||||| |||||||||||||||||||||| |||||| | || | ||  | ||||||  |||| ||||||||||| ||| |||  ||||||||||| ||||    
T  1350393 cttttttcaagggaaaaacagttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataata 1350294  T
Q  439 ttaa 442  Q
    ||||    
T  1350293 ttaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 27493969 - 27493902
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| ||||||||||||   ||||||||||||||||||||  |||||||| ||||||    
T  27493969 catgtttgtaacatggatagtcattttaaaaacaatattaatcttcctaacattcatccttgtgtttt 27493902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 28445425 - 28445358
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||  || || |||||||| ||||||    
T  28445425 catgtttgtaacatggatagtcattttaaggacaatattaatctttgtagctttcatccttgtgtttt 28445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 418 - 469
Target Start/End: Original strand, 34530150 - 34530201
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||| ||||||    
T  34530150 atagtcattttaaggacagtattaatcttcctaactttcatccttgtgtttt 34530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 38641035 - 38641102
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| ||||||||||||||||||||  | |||||||| ||||||    
T  38641035 catgtttgtaacatagatagtcattttaaggacaatattaatcttcctagttttcatccttgtgtttt 38641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 585 - 686
Target Start/End: Original strand, 33331419 - 33331518
Alignment:
Q  585 gtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaa 684  Q
    |||||| ||||||||||  ||||| | |||| ||||||  |||||| |||||||||||||| |||||  ||||| |||| ||||| ||||||| ||||||    
T  33331419 gtagaagggacttcttaccagacttcgtccctcaaaatccaaaatttcatcgtttagaccttttttt--ttttttatattctcagcaaaatccaaaaaaa 33331516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 16429168 - 16429233
Alignment:
Q  397 ctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctt 462  Q
    |||| ||||||||||| ||| ||||||||||||  || |||| |||||||| ||||||||||||||    
T  16429168 ctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatcctt 16429233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 689
Target Start/End: Original strand, 38871989 - 38872054
Alignment:
Q  625 aaaattccatcgtttag-acctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||| ||||||||| |||  ||||| ||||||||||| |||| ||||||||||||||||||||    
T  38871989 aaaattctatcgtttaggaccatttttttatttttcatattctcaaaaaaatccgaaaaaatttgc 38872054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 5535461 - 5535378
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttc 488  Q
    |||||| || |||||||  || |||| |||| ||| ||||| ||||||| ||||||||| |||||| ||||||||||||||||||    
T  5535461 tgtttgaaacatgaataaccagtttaaggactatactaatcatcctaac-ctcatccttgtgttttaggtcattgttagttgttc 5535378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 3435567 - 3435632
Alignment:
Q  625 aaaattccatcgtttagacctatttttaa---tttttcatatactcagaaaaatccgaaaaaattt 687  Q
    |||||| |||| |||||||||||||||||   |||||||||| || ||||||||| ||||||||||    
T  3435567 aaaatttcatcatttagacctatttttaattttttttcatattcttagaaaaatctgaaaaaattt 3435632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 537
Target Start/End: Original strand, 19027226 - 19027297
Alignment:
Q  471 ggtcattgttagttgttcttagtaaaaaa-----ttgggtttttggcctacttgatcggattgctccgaaac 537  Q
    ||||||||||| |||||||||||||||||     || ||||||||| |||||| ||| ||||||||||||||    
T  19027226 ggtcattgttaattgttcttagtaaaaaaagaaatttggtttttgggctacttaatcagattgctccgaaac 19027297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 658
Target Start/End: Original strand, 20891872 - 20891963
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||| ||||||| || || |||||||||| | || ||| |||  ||||||  |||||||||||||||||||  |||||| ||||||    
T  20891872 tcaaggatcatgactcccctacaagggacttcttacgggattccgtccttcaaaatccaaaattccatcgtttagacacatttttcattttt 20891963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 643
Target Start/End: Complemental strand, 28445354 - 28445284
Alignment:
Q  572 gatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagac 643  Q
    ||||||||||||| ||||| |||||||||| || |||||  ||| ||||||  |||||||||||||||||||    
T  28445354 gatcaagactcccttagaagggacttcttatgatactcc-gccctcaaaatccaaaattccatcgtttagac 28445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 651
Target Start/End: Complemental strand, 43388011 - 43387937
Alignment:
Q  576 aagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||||||||| |||||||||||||||| | |||||| | || ||||||  ||||||||||| ||||||||| |||||    
T  43388011 aagactcccttagaaaggacttcttacgggactccgt-cctcaaaatccaaaattccatcatttagaccttttttt 43387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Complemental strand, 4027755 - 4027714
Alignment:
Q  648 ttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||||| || ||||||||||||||||| ||||    
T  4027755 ttttaatttttcatattcttagaaaaatccgaaaaaaattgc 4027714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 536
Target Start/End: Original strand, 18514932 - 18515037
Alignment:
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    |||| |||| |||||||||||||| |||||||  |||||  |||||||||||  ||| | ||| ||||||  |||||| |  ||||||||||  ||||||    
T  18514932 ggaccatatcaatcttcctaactcacatccttcagttttacgtcattgttagcggttttcagtcaaaaatccggttttcgagctacttgatcaaattgct 18515031  T
Q  531 ccgaaa 536  Q
    ||||||    
T  18515032 ccgaaa 18515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Original strand, 29862909 - 29862946
Alignment:
Q  652 aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||| || ||||||||||||||||||||||    
T  29862909 aatttttcatattctaagaaaaatccgaaaaaatttgc 29862946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Complemental strand, 38692548 - 38692511
Alignment:
Q  652 aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  38692548 aatttttcatattctcagaaaaatcagaaaaaatttgc 38692511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 333 - 689
Target Start/End: Complemental strand, 33452525 - 33452183
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| |||| |||||||||  |||| ||||||||||| ||| ||| |||||||| ||    
T  33452525 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttaggg 33452428  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||  |||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  33452427 acaatattaatcttcctaactctcattcttttgttttgggtctttgttatctgttcttagtcaaaaatcgggtttctggactacttgatcggattgctcc 33452328  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| | |||| ||||| ||| |          ||||||| || ||||||| || ||  ||||||||| | ||||||  ||| ||||||  ||||||||    
T  33452327 gaaactttcccagaaaatcagaaa-----aaaaatcaaggaccatgactcccataaaagcgacttcttacgggactccgcccctcaaaatccaaaattcc 33452233  T
Q  633 atcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||        ||||||||||| |||||||||||||||||||||||||    
T  33452232 atcgtttagacc-------catttttcatattctcagaaaaatccgaaaaaatttgc 33452183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 333 - 554
Target Start/End: Complemental strand, 41203269 - 41203049
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||  ||| |||||||||||| |||| ||||| ||||| ||||  ||||||||   ||| ||||||||||| ||| |||||||||||||||    
T  41203269 aacacccttttta-aagagaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatgg 41203171  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||  |||||||||| ||||||||| |||| || | ||||||||||||||||||    
T  41203170 acaatattaatcttcctaactttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctcc 41203071  T
Q  533 gaaacatccccaaaaaattaga 554  Q
    ||||| |||||| |||||||||    
T  41203070 gaaacttccccagaaaattaga 41203049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 32187933 - 32187736
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||   |||  |||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  32187933 aaaacagttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 32187834  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| ||||||||||||||||||  ||||||| || |||||| ||||||| || ||||||||||||||||||||||||| |||||| |||||    
T  32187833 tctcatccttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttccccagaaaat 32187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 353 - 683
Target Start/End: Complemental strand, 41510492 - 41510159
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||| |||||| ||||||| ||| ||||  |||||||   |||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  41510492 aaaacagtccggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatga-tagtcattttagggacaatattaatcttcctaac 41510394  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||||||||||||||||| |||| | ||||| |    
T  41510393 tctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccctagaaaatca 41510294  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc-------- 644  Q
    || |          ||||||| || ||||| | ||||| | |||||||| | ||||||| ||| ||||||  |||||| |||||||||||||            
T  41510293 gaaa------aaattcaaggaccatgactctcttagaaggaacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagacccctttttt 41510200  T
Q  645 --tatttttaatttttcatatactcagaaaaatccgaaaaa 683  Q
      | ||||||||||||||||| |||| ||||||||||||||    
T  41510199 tttttttttaatttttcatattctcaaaaaaatccgaaaaa 41510159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 353 - 658
Target Start/End: Original strand, 42894467 - 42894766
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||| |||||| |||| |||||| ||||  ||||||||  |||| ||||||| ||| ||| ||| |||||||| ||||||||||||||||||||||    
T  42894467 aaaacagtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaac 42894566  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    |||| ||||| ||||||||||||||||||  |||||||||  |||||| | ||||| || ||||||||||||||| ||||||||| |||||| |||||||    
T  42894567 tctcttccttctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttccccagaaaatta 42894666  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || ||||||| ||||| | |||||||| | ||||||  ||| ||||||  |||||||||||||||||||| |||||||    
T  42894667 gaaa------aaattcaaggaccatgactcccttagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttta 42894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 15995177 - 15994980
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||||| |||| ||||  |||| |||  |||| ||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  15995177 aaaacagttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaac 15995078  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||| || ||||||||||||||||||  |||||||||||||||||||| ||||  | ||| ||||||||||||||||||||| |||||| |||||    
T  15995077 tctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggattttcagactatttgatcggattgctccgaaacttccccataaaat 15994980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 341 - 688
Target Start/End: Original strand, 34517179 - 34517535
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| |||||||||||||||| ||||| ||||||||||| ||||  ||||||||  |||| |||||  |||| ||| |||||||||||||| ||||||||    
T  34517179 tttttcaagggaaaaacagtttggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatatt 34517278  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatc 540  Q
    |||| || ||||| |||||||| ||||||||||||||||||  |||||||||| |||||||||||||| ||  |||||||||||||||||||||||| |     
T  34517279 aatcatcataactttcatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctccgaaactta 34517378  T
Q  541 cccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgttta 640  Q
    |||| ||| | ||| |          |||||||||| ||||||| ||||| |||||||||| | || |||   || ||||||  ||||||||||||||||    
T  34517379 cccagaaagtcagaaa----aaaaattcaaggatcatgactcccatagaagggacttcttacgggattccgcacctcaaaatccaaaattccatcgttta 34517474  T
Q  641 gacctatttt-------------taatttttcatatactcagaaaaatccgaaaaaatttg 688  Q
    |||| |||||             ||||||||||||| ||||||||||||||||||||||||    
T  34517475 gaccaatttttcattttgttttttaatttttcatattctcagaaaaatccgaaaaaatttg 34517535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 347 - 550
Target Start/End: Original strand, 5507503 - 5507706
Alignment:
Q  347 aagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatctt 446  Q
    |||| ||||| |||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||||  ||||||||||||||    
T  5507503 aaggaaaaaatagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatctt 5507602  T
Q  447 cctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaa 546  Q
    |  ||||||||| ||| ||||||||||||||| ||  |||||||||| ||||||  |||||| || | ||||||||||||||||||||||| |||||| |    
T  5507603 cacaactctcattcttctgttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttccccaga 5507702  T
Q  547 aaat 550  Q
    ||||    
T  5507703 aaat 5507706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 333 - 658
Target Start/End: Complemental strand, 41854981 - 41854668
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||  ||| ||||  ||||||||  |||| |||||||||||     |||||||||| | ||    
T  41854981 aacaccctttttcaa--ggtaaaacagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcaggg 41854889  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||  || ||||||| |||||||||||||||||||     
T  41854888 acaatattaatcttcctaactctcatccttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctct 41854789  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| ||| |          |||||||||| ||| ||  ||||| | |||||||| | ||||||  ||| ||||||  ||||||||    
T  41854788 gaaacttccccagaaaatcagaaa-----aaaattcaaggatcatgacaccattagaaggaacttcttatgggactccgcccctcaaaatccaaaattcc 41854694  T
Q  633 atcgtttagacctatttttaattttt 658  Q
    |||||||||||| |||||| ||||||    
T  41854693 atcgtttagacccatttttcattttt 41854668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 359 - 544
Target Start/End: Complemental strand, 16750485 - 16750302
Alignment:
Q  359 gttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcat 458  Q
    ||||||||| |||||| |||| ||||  |||| |||  ||||| |||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||    
T  16750485 gttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcat 16750388  T
Q  459 ccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatcccca 544  Q
    |||| ||||||||||||||||||  ||||||||||||||||| || |||| || ||||||||||||||||  ||||||| ||||||    
T  16750387 ccttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattgtaccgaaacttcccca 16750302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 369 - 658
Target Start/End: Complemental strand, 25217824 - 25217539
Alignment:
Q  369 tataatccg-aattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtt 467  Q
    ||||||||| || |||| |||||||||  |||| ||||||||||  ||| |||||||||||  ||||||| |||||||||||||||||| ||||| ||||    
T  25217824 tataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctgtt 25217725  T
Q  468 tt-gggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnn 566  Q
    || ||||||||||||  ||||||||||||||||| ||||||| || |||||||||||||||||||||| || || | | ||||| ||| |              
T  25217724 tttgggtcattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgacacttctctagaaaatcagaaa------aaat 25217631  T
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||| || ||||||| ||||| |||||||||| | ||||||  ||| ||||||  ||||||| |||||||||||| |||||| ||||||    
T  25217630 tcaaggaccatgactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacccatttttcattttt 25217539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 333 - 500
Target Start/End: Complemental strand, 44465809 - 44465644
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  ||||||||  |||| ||||||||||| |||  ||||||||||| ||    
T  44465809 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttaggg 44465712  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaat 500  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||| ||||||    
T  44465711 acaatattaatcttcctaactctcatccttctgttttgggtcattgttacctcttcttagtcaaaaat 44465644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 333 - 542
Target Start/End: Original strand, 39447234 - 39447441
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || |||| |||||||||| |||||| | || ||||  ||||||||  |||| ||||||||||| ||| ||||||||||||  |    
T  39447234 aacaccctttttcaa--ggtaaaatagttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaag 39447331  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||| |||||| |||| ||  | || ||||||||||||||||     
T  39447332 acaatattaatcttcctaactctcatccttctattttgggtcattgttacatgttcttagtcaaaaatcgggtcttccgactgcttgatcggattgctct 39447431  T
Q  533 gaaacatccc 542  Q
    ||||| ||||    
T  39447432 gaaacttccc 39447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 36875075 - 36875272
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||||| |||||| |||||||| || |||| ||||| |||  |||| || |||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  36875075 aaaacagtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaac 36875174  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| ||||||||||||||||||   ||||||||  |||||| |||||||  | |||||| |||| ||||||||||| | |||||| |||||    
T  36875175 tctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctccgaatcttccccataaaat 36875272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 333 - 537
Target Start/End: Complemental strand, 19110097 - 19109895
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| ||||||||||  ||||| ||| |||||||| || | ||  ||||||||   |||  || ||||||| ||| || ||||||||| ||    
T  19110097 aacaccctttttc-aagggaaaaattgttcg-attatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaagg 19110000  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    | |||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||   |||||||| ||||||||||||||||||||    
T  19109999 ataatattaatcttcctaactctcatccttttattttgggtcattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctcc 19109900  T
Q  533 gaaac 537  Q
    |||||    
T  19109899 gaaac 19109895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 418 - 550
Target Start/End: Original strand, 30763804 - 30763936
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctact 517  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||| ||||||  | ||||||| | |||    
T  30763804 atagtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaact 30763903  T
Q  518 tgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||||||||||||| ||| || |||||    
T  30763904 tgatcggattgctccgaaacttcctcagaaaat 30763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 421 - 689
Target Start/End: Complemental strand, 38308829 - 38308566
Alignment:
Q  421 gtcattttatggacaatattaatcttc--ctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctactt 518  Q
    |||||||||||||||||||||||||||   ||||| |||||||| ||||||||||| ||||||  |||||||||| |||||| ||| ||| || ||||||    
T  38308829 gtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatttcgggctactt 38308731  T
Q  519 gatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccaca 618  Q
    |||| |||||||| ||||| |||||| ||||| ||| |          |||||||||| ||||||| ||||| ||| || |||   ||||||  ||| ||    
T  38308730 gatcagattgctctgaaacttccccagaaaatcagaaa------aaattcaaggatcatgactcccttagaagggaatttttattggactccgcccctca 38308637  T
Q  619 aaatataaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||  |||||||||| |||||||||  ||||| ||||||||||| ||| |||||||||||||||||||||    
T  38308636 aaatccaaaattccattgtttagacccttttttgatttttcatattctccgaaaaatccgaaaaaatttgc 38308566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 333 - 650
Target Start/End: Original strand, 35251001 - 35251313
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||| ||| |||| ||||||| |||  ||| |||||||| || |||| |||||||||  || |   ||||||||||||| |||| || |||| ||    
T  35251001 aacacccttattc-aaggaaaaaacaattcatattatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaagg 35251099  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    || |||||||||||| ||||||  |||||| | |||| |||||||||||||||||||||||  |||||  |||||| || |||||||||| |||||||||    
T  35251100 accatattaatcttcttaactcctatccttctattttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctcc 35251199  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| | |||| ||||| |||||           ||||||||||||||||| ||||||| |||||||| || |||||  |||  |||||  |||||| |    
T  35251200 gaaactttcccagaaaatcagaga----aaaaaaccaaggatcaagactcccatagaaagtacttcttatgaaactccgccccttaaaatccaaaatttc 35251295  T
Q  633 atcgtttagacctatttt 650  Q
    |||||||||||| |||||    
T  35251296 atcgtttagacccatttt 35251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 347 - 536
Target Start/End: Original strand, 8388735 - 8388924
Alignment:
Q  347 aagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatctt 446  Q
    |||| ||||||||||| |||| |||| |||||| ||||  ||||||||  ||||  |||||||||| ||| || | ||| ||||||||||||||||||||    
T  8388735 aaggaaaaaacagttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatctt 8388834  T
Q  447 cctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaa 536  Q
    ||||||||||||||||  |||||||||||||||| | ||||||||||  ||||| ||||||| |  ||||||||| | | ||||||||||    
T  8388835 cctaactctcatccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgattgaaatgctccgaaa 8388924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 426 - 550
Target Start/End: Original strand, 42478906 - 42479030
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcgga 525  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||| |||||||  ||||| || |||||||||| ||    
T  42478906 tttaaggaccatattaatcttcctaactctcatccttatgttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcaga 42479005  T
Q  526 ttgctccgaaacatccccaaaaaat 550  Q
    |||||| ||||| ||||||||||||    
T  42479006 ttgctctgaaacttccccaaaaaat 42479030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 353 - 508
Target Start/End: Complemental strand, 36949009 - 36948854
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||| |||| ||||| |||||||| || ||||  ||||||||  |||| ||| ||| ||| ||| ||||  |||||| ||||||||||||||||||||||    
T  36949009 aaaatagtttggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaac 36948910  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttt 508  Q
    ||| |||||| |||||||||| |||||||  |||||||||| ||||||||||||||    
T  36948909 tcttatccttttgttttgggtaattgttacctgttcttagtcaaaaattgggtttt 36948854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 45153806 - 45153715
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagt 493  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||    
T  45153806 catgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttctgttttgggtcattgttacctgttcttagt 45153715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 353 - 508
Target Start/End: Complemental strand, 17474863 - 17474708
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||| ||||| ||||||||||| ||||  ||||||||   ||| ||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  17474863 aaaacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaac 17474764  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttt 508  Q
    ||||||  || |||| || | ||||||||  ||||||| || |||||| |||||||    
T  17474763 tctcataattctgttatgcggcattgttacctgttcttcgtcaaaaatcgggtttt 17474708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 402 - 689
Target Start/End: Complemental strand, 33440524 - 33440244
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||| | ||||| | |||||||| ||| |||||||||||| ||||| ||||||||| |||||||||||||||||   ||||| | |||||||||     
T  33440524 catgtttgttacatgaaaattcattttaaggataatattaatctttctaac-ctcatccttctgttttgggtcattgttcactgttcatggtaaaaaata 33440426  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattag-agagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttctt 600  Q
     |||| |  | |||||||| | | |||||||||||| |||||| ||||| || | ||           |||||||||||||||  || || |||||||||    
T  33440425 cggttatcagactacttgaccaggttgctccgaaacttccccagaaaatcaggaaaggcct-------aaggatcaagactcctataaaagggacttctt 33440333  T
Q  601 aagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    | | ||||||  | | ||||||  |||||||||||||||||| | |||||| ||||||||||| ||||||||||| ||||| |||||||    
T  33440332 acgggactccgcctctcaaaattcaaaattccatcgtttagatccattttttatttttcatattctcagaaaaattcgaaagaatttgc 33440244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 550
Target Start/End: Original strand, 45293813 - 45293927
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||||||||||| || |||||| |||||||| |||||||||||||| ||||||  |||||| || ||||||||||  ||||||| |||    
T  45293813 atattaatcttcctaactctcatctttctgttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaa 45293912  T
Q  536 acatccccaaaaaat 550  Q
    || | |||| |||||    
T  45293913 actttcccataaaat 45293927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 689
Target Start/End: Complemental strand, 38065543 - 38065300
Alignment:
Q  451 actctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||| ||| |||||||||| |||||||  |||||||||||||||||| | ||||  | ||| ||||||||||||||||||||| | |||| |||||    
T  38065543 actctcattcttctgttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctccgaaactttcccataaaat 38065444  T
Q  551 tagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacc------ 644  Q
     ||| |          |||||||||| |||||| ||||||  ||||||||| | ||||||  ||| ||||||  |||||| |||||||||||||          
T  38065443 cagaaa------aaattcaaggatcatgactcctgtagaagagacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttt 38065350  T
Q  645 -----tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
         | ||||||||||||||||  |||||||||||||||||||||||||    
T  38065349 aattttttttttaatttttcataatctcagaaaaatccgaaaaaatttgc 38065300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 436 - 550
Target Start/End: Original strand, 26228239 - 26228353
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||   ||||| |  |||||||||| ||||  ||||||    
T  26228239 atattaatcttgctaactctcatccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagattcgtccgaa 26228338  T
Q  536 acatccccaaaaaat 550  Q
    || |||||| |||||    
T  26228339 acttccccataaaat 26228353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 404 - 536
Target Start/End: Complemental strand, 37773829 - 37773696
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgg 503  Q
    ||||||||| ||| |||| || |||| |||| || |||||||| ||||||||||||||| |||||| | ||||||||||||||||||||| |||| |       
T  37773829 tgtttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtcca 37773730  T
Q  504 gt-ttttggcctacttgatcggattgctccgaaa 536  Q
    || |||||| |||||||||| |||||||| ||||    
T  37773729 gtattttgggctacttgatcagattgctctgaaa 37773696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 625 - 689
Target Start/End: Original strand, 8388998 - 8389062
Alignment:
Q  625 aaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||    
T  8388998 aaaattccatcgtttagacccaatttttatttttcatatactcaaaaaaatccgaaaaaatttgc 8389062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 567 - 651
Target Start/End: Original strand, 11457250 - 11457334
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    ||||||||||| | |||| ||||| |||||||||| |||||||| |||| |||||| ||||||||||||||||||||| ||||||    
T  11457250 tcaaggatcaaaattcccatagaagggacttcttacgagactccgtccctcaaaatttaaaattccatcgtttagaccaattttt 11457334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 17766844 - 17766777
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  17766844 catgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatccttgtgtttt 17766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 34519552 - 34519485
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  34519552 catgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatccttatgtttt 34519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 457
Target Start/End: Complemental strand, 38066756 - 38066633
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||| ||||| ||||||||||||||||  ||| ||||| |||||  ||| || ||||||  ||||  |||||||||| ||| |||||||||||| ||    
T  38066756 aacaccccttttc-aagggaaaaacagttcatattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaagg 38066658  T
Q  433 acaatattaatcttcctaactctca 457  Q
    ||||||||||||||| | |||||||    
T  38066657 acaatattaatcttcattactctca 38066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 689
Target Start/End: Original strand, 2764832 - 2764897
Alignment:
Q  624 taaaattccatcgtttagacctatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||| ||||||||||||  |||||| ||||||||||| |||| ||||||||||||||||||||    
T  2764832 taaaatttcatcgtttagactcattttttatttttcatattctcataaaaatccgaaaaaatttgc 2764897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 426 - 522
Target Start/End: Complemental strand, 27900605 - 27900509
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatc 522  Q
    |||| |||| |||||||| ||| |||||||||||||| ||||||   ||||||||  |||||||||||||||||||  |||||||| ||| ||||||    
T  27900605 tttaaggaccatattaattttcttaactctcatccttctgttttatatcattgttgattgttcttagtaaaaaattcagtttttgggctatttgatc 27900509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 9847227 - 9847160
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||  |||||||||||| ||||||||||||||||| ||||| |||||||| ||||||    
T  9847227 catgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatccttgtgtttt 9847160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 32187647 - 32187605
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  32187647 tttttaatttttcatatgctcagaaaaatccgaaaaaatttgc 32187605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 431 - 488
Target Start/End: Original strand, 34817269 - 34817326
Alignment:
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttc 488  Q
    |||| |||||||||||||||||| ||||||| ||||||| |||||||||||| |||||    
T  34817269 ggaccatattaatcttcctaactatcatcctcatgttttaggtcattgttagatgttc 34817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 567 - 689
Target Start/End: Complemental strand, 44465596 - 44465464
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt----------aattt 656  Q
    ||||||| || ||||||| ||||| |||||||||| | ||||||  ||| ||||||  ||||||||||| |||||||| ||||||          |||||    
T  44465596 tcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcttttagacccatttttcattttttaaaattt 44465497  T
Q  657 ttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||| ||||||||||||||||||| |||||    
T  44465496 ttcatattctcagaaaaatccgaaaaattttgc 44465464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 9847419 - 9847368
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||||||||||| ||||||||||||||||||||| | |||||||| ||||||    
T  9847419 atagtcattttaaggacaatattaatcttcctaaatttcatccttgtgtttt 9847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 647 - 686
Target Start/End: Original strand, 42894766 - 42894805
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatt 686  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  42894766 tttttaatttttcatattctcagaaaaatccgaaaaaatt 42894805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 17474564 - 17474522
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  17474564 tttttaatttttcatattctcagaaaaatctgaaaaaatttgc 17474522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 25217539 - 25217497
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  25217539 tttttaatttttcatattctcagaaaaatccgaaaaaacttgc 25217497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 41854668 - 41854626
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  41854668 tttttaatttttcatattctcagaaaaattcgaaaaaatttgc 41854626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 658
Target Start/End: Original strand, 27670723 - 27670885
Alignment:
Q  490 tagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtaga 589  Q
    |||| |||||| ||||||| || ||||||||||||||||||||||||| | |||| ||||| ||| |          |||| || || ||||||| ||||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctccgaaactttcccataaaatcagaaa------aaattcaacgaccatgactcccttaga 27670816  T
Q  590 aaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |  ||| ||||| | ||||||  ||| ||||||  |||||||||||||||||||| |||||| ||||||    
T  27670817 agagacctcttatgggactccgcccctcaaaattcaaaattccatcgtttagacccatttttcattttt 27670885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 38308315 - 38308378
Alignment:
Q  175 cgctttgtaaatctttcaaaaatgcctttgaacaatttggattttaaaatccaaattcatgttt 238  Q
    |||| ||||||  ||||||||||||| |||   |||| ||||||||||||||||||||||||||    
T  38308315 cgctctgtaaaattttcaaaaatgcccttgtgtaattcggattttaaaatccaaattcatgttt 38308378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 8388525 - 8388606
Alignment:
Q  180 tgtaaatctttcaaaaatgcctttgaacaatttggattttaaaatccaaattcatgttttccctgcgttatagggtgaaaaaa 262  Q
    ||||||| |||| ||||| || |||| ||||| |||||||  |||||||||||| ||||| |||  |||||||||||||||||    
T  8388525 tgtaaatttttcgaaaattcccttgagcaattcggattttgtaatccaaattca-gtttttcctttgttatagggtgaaaaaa 8388606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 404 - 537
Target Start/End: Complemental strand, 13704826 - 13704692
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcc-ttatgttttgggtcattgttagttgttcttagtaaaaaattg 502  Q
    ||||||||||||| ||| ||| ||   |||| | |||||||||  ||||| |||||| || |||||| ||| ||||||||||||| | ||| ||||||      
T  13704826 tgtttgtaatatggataatcagttacaggaccaaattaatctttttaactttcatcccttctgttttaggttattgttagttgttttcagtcaaaaatcc 13704727  T
Q  503 ggtttttggcctacttgatcggattgctccgaaac 537  Q
    | |||| || |||||||||| |||||||| |||||    
T  13704726 gattttcgggctacttgatcagattgctctgaaac 13704692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 16750210 - 16750168
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||    
T  16750210 tttttaatttttcatattctcaaaaaaatctgaaaaaatttgc 16750168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 572 - 658
Target Start/End: Original strand, 17133028 - 17133114
Alignment:
Q  572 gatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    ||||||||||||| |||||  ||||| ||| | ||||||  ||| ||||||  |||||| ||||||||||||| |||||| ||||||    
T  17133028 gatcaagactcccttagaagagactttttacgggactccgaccctcaaaatccaaaatttcatcgtttagacccatttttcattttt 17133114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 17638408 - 17638350
Alignment:
Q  251 agggtgaaaaaattagttcttcctcaattcgaattttataagccgaaaacttcaaaaaa 309  Q
    ||||||||||||| ||||||||  ||||||| |||||||||  ||||||||| ||||||    
T  17638408 agggtgaaaaaatgagttcttcaccaattcggattttataattcgaaaacttaaaaaaa 17638350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Original strand, 34817488 - 34817530
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  34817488 tttttaaattttcatattctcagaaaaattcgaaaaaatttgc 34817530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 658
Target Start/End: Complemental strand, 16750242 - 16750209
Alignment:
Q  625 aaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||||||||||||| |||||||||||||    
T  16750242 aaaattccatcgtttagacccatttttaattttt 16750209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 2e-60; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 353 - 658
Target Start/End: Complemental strand, 4508371 - 4508072
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||| ||| ||||  ||||||||  |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  4508371 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaac 4508272  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaatta 552  Q
    | |||||||| ||||||||||||||||||  |||||||||| |||||| ||||||| || ||||||||| ||||||||||||||| ||| || ||||| |    
T  4508271 tttcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttccgcagaaaatca 4508172  T
Q  553 gagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttta 652  Q
    || |          ||||||| || |||||||  ||||  ||||||||||| ||||||  ||| ||||||  |||||||||||||||||||| ||||||     
T  4508171 gaaa------caattcaaggaccatgactcccacagaagagacttcttaagggactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 4508078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 333 - 658
Target Start/End: Complemental strand, 2813311 - 2812992
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||| |||||||| | |||||||||| ||||  | ||||||  |||| ||| ||| ||| |||||||||||||||||||    
T  2813311 aacaccctttttcaa--ggtaaaacggttcggatat-ataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatgg 2813215  T
Q  433 acaatattaatcttcctaactctcatccttatgtttt-gggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctc 531  Q
    | ||||||||||||||||||||||||||||  ||||| ||||||||||||  |||||||||| |||||| ||||||| || |||||||||||||||||||    
T  2813214 ataatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 2813115  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
    |||||| |||||| ||||| ||| |          ||||||| || ||||||| ||||| |||||||||| | ||||||| ||| ||||||  ||||||     
T  2813114 cgaaacttccccagaaaatcagaaa----aaaaattcaaggaccatgactcccttagaatggacttcttatgggactccacccctcaaaatccaaaattt 2813019  T
Q  632 catcgtttagacctatttttaattttt 658  Q
    ||||||||||||| |||||| ||||||    
T  2813018 catcgtttagacccatttttcattttt 2812992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 353 - 550
Target Start/End: Complemental strand, 3717352 - 3717154
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| ||||||||||| ||||  | ||||||  |||| ||||| ||||| ||| |||||||||||| ||||||||||||| || |||||    
T  3717352 aaaacagttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaac 3717253  T
Q  453 tctcatccttatgtttt-gggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||||| |||||| ||||||||||||  |||||||||| |||||| |||||||  | ||||||||||||||||||||||||||||||||||||||    
T  3717252 tctcatccttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacatccccaaaaaat 3717154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 333 - 537
Target Start/End: Complemental strand, 13801114 - 13800912
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    |||||||||||  ||||| || |||||||||||||  |||||| ||| |||| ||||| |||  |||| ||||||||||| ||  ||  ||||||||||     
T  13801114 aacaccctttt--caaggaaagaacagttcggattacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatga 13801017  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  13801016 acaatattaatcttcctaactctcatcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctcc 13800917  T
Q  533 gaaac 537  Q
    |||||    
T  13800916 gaaac 13800912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 353 - 542
Target Start/End: Complemental strand, 14587629 - 14587440
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||||||| |||||||  || ||||   |||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  14587629 aaaacagttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaac 14587530  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccc 542  Q
    ||| |||||||||||||||||||||||||  |||||||||||||||| ||| ||||||| ||||||||| |||||||| |||||| ||||    
T  14587529 tctaatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggatttttgggctacttgattggattgcttcgaaacttccc 14587440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 333 - 651
Target Start/End: Original strand, 17264482 - 17264791
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || |||| |||||||||| ||||||| ||| ||||  ||||||||  |||| |||||||| || |||  ||||||||||| ||    
T  17264482 aacaccctttttcaa--ggtaaaatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcattttaggg 17264579  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||| ||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  17264580 acaatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgttcttagttaaaaattgagtttttgggctacttgatgggattgctcc 17264679  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| |||||| ||||| ||| |          ||||||| || ||||||| ||||| |||||||||| | |||| | |||| ||||||  |||||| |    
T  17264680 gaaacttccccagaaaatcagaaa-------aattcaaggaccatgactcccctagaagggacttcttacgggacttcgtccctcaaaatccaaaatttc 17264772  T
Q  633 atcgtttagacctattttt 651  Q
    |||||||||| | ||||||    
T  17264773 atcgtttagatccattttt 17264791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 403 - 651
Target Start/End: Complemental strand, 21515050 - 21514808
Alignment:
Q  403 atgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattg 502  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||  |||||||||| |||||| |    
T  21515050 atgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtcaaaaatcg 21514951  T
Q  503 ggtttttggcctacttgatcggattgctccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaa 602  Q
    | |||| || ||||||||||||||||||||||||| |||||| ||||||||| |          ||||||||| | |||||| ||||| ||||||||||     
T  21514950 gattttcggactacttgatcggattgctccgaaacttccccataaaattagaaa-----aaaattcaaggatc-atactcccttagaagggacttcttac 21514857  T
Q  603 gagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    | ||||||  ||| ||||||  |||||||||||||||||||| ||||||    
T  21514856 gggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 21514808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 333 - 689
Target Start/End: Original strand, 2539523 - 2539881
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| | ||   |||||||  || | ||||||||||| ||| |||||||||||| ||    
T  2539523 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactctatccgcacaaattctgaacatgtttgtaacatggatagtcattttaggg 2539620  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  | ||| |||| |||||  | ||||| || ||||||||||||||||||||    
T  2539621 acaatattaatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagttttcggactacttgatcggattgctcc 2539720  T
Q  533 gaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattcc 632  Q
    ||||| | |||| ||||| ||| |          ||||||| || ||||| | |||||  ||||||||| | ||||||  ||| ||||||  |||||||     
T  2539721 gaaacttgcccagaaaatcagaaa------aaattcaaggaccatgactctcatagaagtgacttcttacgggactccgcccctcaaaatccaaaattca 2539814  T
Q  633 atcgtttagacctattttt----------aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||  ||||||          |||||||||||| |||||||||||||||||||||||||    
T  2539815 atcgtttagactcatttttcattttttaaaatttttcatattctcagaaaaatccgaaaaaatttgc 2539881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 353 - 550
Target Start/End: Original strand, 23406886 - 23407084
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    ||||||||||| ||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  23406886 aaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 23406985  T
Q  453 tctcatccttatg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||||  | |||||||||||| ||| ||||||||||| ||||||   ||||| || |||||||||  |||||||||||||| |||||| |||||    
T  23406986 tctcatccttccgtttttgggtcattattacttgttcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttccccagaaaat 23407084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 364 - 550
Target Start/End: Original strand, 5699666 - 5699853
Alignment:
Q  364 gattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctta 463  Q
    |||| ||||||||||| |||| || ||||||  ||||  |||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||     
T  5699666 gattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttc 5699765  T
Q  464 tg-ttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    || ||||||||||||||||  | |||||||| |||||| ||| ||| || ||||||||||||||||||||||||| |||||| |||||    
T  5699766 tgtttttgggtcattgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttccccagaaaat 5699853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 358 - 550
Target Start/End: Original strand, 29519374 - 29519566
Alignment:
Q  358 agttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctca 457  Q
    |||||||||| ||||||  ||| ||||  ||||||||  |||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  458 tccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||| | ||||||||||||||||  ||||||| || |||||| ||||||| |  ||||||||||  ||||||||||||| ||| || |||||    
T  29519474 tccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcctcagaaaat 29519566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 341 - 542
Target Start/End: Complemental strand, 24604442 - 24604241
Alignment:
Q  341 ttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatatt 440  Q
    |||| |||||||||||||||||  ||| ||||||| ||| | ||  ||||||||  |||| ||| ||||||| |   ||||||||||||  |||||||||    
T  24604442 tttttcaagggaaaaacagttcatattatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatatt 24604343  T
Q  441 aatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatc 540  Q
    ||||||||||||| |||||||| ||||||| ||||||||||  |||||||||| |||||| |||||||||| ||||||||||  |||||| | |||||||    
T  24604342 aatcttcctaactttcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggtttttgggctacttgatcacattgcttctaaacatc 24604243  T
Q  541 cc 542  Q
    ||    
T  24604242 cc 24604241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 333 - 544
Target Start/End: Complemental strand, 29289714 - 29289503
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    |||||| ||||| |||| |||||||| |||||||| ||||||| ||| ||||  ||||||||   | | ||| ||||||| ||  ||| | |||||||||    
T  29289714 aacaccattttttcaagtgaaaaacaattcggattatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatgg 29289615  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||| |||||||||| ||||||| |||||| |||||||||||| |||||||||| ||||||  |||||| |  ||||||||||  ||||||||    
T  29289614 acaatattaattttcctaactcgcatccttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctcc 29289515  T
Q  533 gaaacatcccca 544  Q
    ||||| ||||||    
T  29289514 gaaacttcccca 29289503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 331 - 527
Target Start/End: Complemental strand, 7734416 - 7734221
Alignment:
Q  331 tgaacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttat 430  Q
    ||||||||| ||||| |||| ||||||||||| |||| |||||| |||| ||||  |  |||||  |||| ||||||||||| | |||| ||||||||||    
T  7734416 tgaacaccccttttc-aaggaaaaaacagttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttat 7734318  T
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggatt 527  Q
    ||||||||||||||||||||||| |||||||| |||||||| |||||||||  |||||||  | ||||||  |||||| || |||||||||| ||||    
T  7734317 ggacaatattaatcttcctaactatcatccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 529
Target Start/End: Complemental strand, 1945599 - 1945423
Alignment:
Q  353 aaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaac 452  Q
    |||||| ||| |||| ||||||||||| ||||   |||||||  |||| ||||||||||| ||| |||||||||||| ||| ||||||||||||||||||    
T  1945599 aaaacaattcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaac 1945500  T
Q  453 tctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgc 529  Q
    |||||||||| ||||||||| ||||||||  |||| ||| | |||||| || |||| ||  || |||||||||||||    
T  1945499 tctcatccttctgttttgggacattgttacctgtttttattcaaaaatcggattttcgggttatttgatcggattgc 1945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 550
Target Start/End: Original strand, 34528579 - 34528727
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||| ||| |||||| | ||| |||||||||||| ||||||||||| ||| |||||||||||||| |||| |||||||||| ||||||     
T  34528579 catgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcattattagctgttcttagtcaaaaatc 34528678  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
     |||||| || |||||||||||||||||||| |||| ||| || |||||    
T  34528679 tggttttcggtctacttgatcggattgctccaaaacttcctcataaaat 34528727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 550
Target Start/End: Original strand, 5638934 - 5639149
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||||||| ||||  |||||| |   ||| ||||| ||||| ||  |||| |||| || ||    
T  5638934 aacaccctttttcaa--ggtaaaacagttcggattatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctaggg 5639031  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctcc 532  Q
    ||||||||||||||| ||||||| |||||| ||||||| ||||||||||  |||||||| | |||||| ||||||  || ||||||| || ||||||||     
T  5639032 acaatattaatcttcttaactcttatccttttgttttgagtcattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctct 5639131  T
Q  533 gaaacatccccaaaaaat 550  Q
    ||||| | ||||||||||    
T  5639132 gaaactttcccaaaaaat 5639149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 436 - 537
Target Start/End: Original strand, 16450387 - 16450488
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||| ||||||| ||||||||| |||||||||| ||||||| ||||    
T  16450387 atattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttggtttttgggctacttgatcagattgcttcgaa 16450486  T
Q  536 ac 537  Q
    ||    
T  16450487 ac 16450488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 402 - 537
Target Start/End: Original strand, 9905253 - 9905389
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatgga-caatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaat 500  Q
    ||||||||||| ||| ||| |||||||| ||| |||||||||| ||||| ||||| |||||| ||||||| ||||||||||    |||||||| ||||||    
T  9905253 catgtttgtaacatggataatcattttagggaacaatattaattttccttactcttatccttctgttttgagtcattgttaccaattcttagtcaaaaat 9905352  T
Q  501 tgggtttttggcctacttgatcggattgctccgaaac 537  Q
     ||||||| || |||||||||||||||||||||||||    
T  9905353 cgggttttcgggctacttgatcggattgctccgaaac 9905389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 418 - 519
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctact 517  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||  |||||||||| ||||||  |||||| || |||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctact 32044636  T
Q  518 tg 519  Q
    ||    
T  32044637 tg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 499
Target Start/End: Original strand, 4893314 - 4893377
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  4893314 atattaatcttcctaattctcatccttatgttttaagtcattgttagttgttcttagtaaaaaa 4893377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 436 - 554
Target Start/End: Complemental strand, 14037948 - 14037833
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||| ||||   ||||||| |||||| ||||||||||||||||||||||| ||||||   ||||| |  |||||||||| ||||||||| ||    
T  14037948 atattaatcttcttaac---catccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaa 14037852  T
Q  536 acatccccaaaaaattaga 554  Q
    ||||||| | |||||||||    
T  14037851 acatcccaataaaattaga 14037833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 236933 - 237018
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgtt 487  Q
    ||||||||||| ||| | | |||||||| |||| |||||||||||||||||||||||| || | |||| |||||||||||||||||    
T  236933 catgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctattttaggtcattgttagttgtt 237018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 17501005 - 17501072
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||||| | |||||||| ||||||    
T  17501005 catgtttgtaacatgaatagtcattttaaggacattattaatcttcctaattttcatccttgtgtttt 17501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 567 - 659
Target Start/End: Original strand, 237096 - 237188
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaatttttc 659  Q
    ||||||| ||||| |||| ||||| || ||||||| | ||||||  ||| ||||||  ||||||||||||||||||||||||||| |||||||    
T  237096 tcaaggaccaagaatcccttagaagggtcttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcatttttc 237188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 567 - 689
Target Start/End: Original strand, 237096 - 237229
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt-----------aatt 655  Q
    ||||||| ||||| |||| ||||| || ||||||| | ||||||  ||| ||||||  |||||||||||||||||||||||||||           ||||    
T  237096 tcaaggaccaagaatcccttagaagggtcttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcatttttctttaatt 237195  T
Q  656 tttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||| ||| |||||||||||||||||||||    
T  237196 tttcatattctccgaaaaatccgaaaaaatttgc 237229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 499
Target Start/End: Original strand, 1439164 - 1439227
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaa 499  Q
    ||||||||||||||||||||||||||||||| |  | ||||||||||||||| | |||||||||    
T  1439164 atattaatcttcctaactctcatccttatgtatcagatcattgttagttgttttcagtaaaaaa 1439227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 542
Target Start/End: Complemental strand, 10310442 - 10310311
Alignment:
Q  411 aatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttg 510  Q
    |||||| ||||||| |||| |||| |||||||||||||||||| |||| ||| | |||| ||| ||||| ||||||||| ||| ||||||    |||||     
T  10310442 aatatggatagtcaatttaaggaccatattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaattttta 10310343  T
Q  511 gcctacttgatcggattgctccgaaacatccc 542  Q
    | ||||||| || ||||| |||||||| ||||    
T  10310342 ggctacttggtcagattgttccgaaacttccc 10310311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 537
Target Start/End: Original strand, 3365838 - 3365939
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaa 535  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||| ||||||  | | ||||||  ||||||  |  |||||||||  |||||||||||    
T  3365838 atattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggttttcaggttacttgatcatattgctccgaa 3365937  T
Q  536 ac 537  Q
    ||    
T  3365938 ac 3365939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 426 - 537
Target Start/End: Complemental strand, 6704122 - 6704012
Alignment:
Q  426 tttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcgga 525  Q
    |||| ||||||||||||||||||||||||||||| ||   |||| |||||||||||| ||||  | || ||||||  |||||| || ||| |||||| ||    
T  6704122 tttaaggacaatattaatcttcctaactctcatcattcgattttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcaga 6704024  T
Q  526 ttgctccgaaac 537  Q
    |||||| |||||    
T  6704023 ttgctctgaaac 6704012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 418 - 469
Target Start/End: Original strand, 17501236 - 17501287
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    |||||||||||| |||||||||||||||||||| || |||||||| ||||||    
T  17501236 atagtcattttaaggacaatattaatcttcctagctttcatccttgtgtttt 17501287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 689
Target Start/End: Complemental strand, 4655722 - 4655592
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagaccta--------tttttaattttt 658  Q
    ||||||||||||||||| |||||||| |||||||| | |||| | |||  ||||||  ||||||| || ||||||| | |        ||||||||||||    
T  4655722 tcaaggatcaagactcctgtagaaagtacttcttacgggacttcgtccttcaaaatccaaaattcaattgtttagatccatttttcattttttaattttt 4655623  T
Q  659 catatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||| ||||||||||||| |||||| ||||    
T  4655622 catattctcagaaaaatccaaaaaaaattgc 4655592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 692
Target Start/End: Complemental strand, 29289466 - 29289421
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgcgtt 692  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  29289466 ttttttatttttcatattctcagaaaaatccgaaaaaaattgcgtt 29289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 674
Target Start/End: Original strand, 35191597 - 35191646
Alignment:
Q  625 aaaattccatcgtttagacctatttttaatttttcatatactcagaaaaa 674  Q
    |||||| ||| ||||| |||||||||||||||||||||| ||||||||||    
T  35191597 aaaatttcatagtttaaacctatttttaatttttcatattctcagaaaaa 35191646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 567 - 643
Target Start/End: Original strand, 3365957 - 3366033
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagac 643  Q
    |||||||| ||||||||  |||||  ||||||||| |||||||| || | |||||| ||||||| ||||||||||||    
T  3365957 tcaaggattaagactcctctagaagagacttcttacgagactccgtcgctcaaaatctaaaatttcatcgtttagac 3366033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 9905388 - 9905452
Alignment:
Q  594 acttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||| | ||||||  ||| ||||||  ||||||||||||||||||||||||||| ||||||    
T  9905388 acttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcattttt 9905452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 689
Target Start/End: Original strand, 17264808 - 17264844
Alignment:
Q  653 atttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17264808 atttttcatattctcagaaaaatccgaaaaaatttgc 17264844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 694
Target Start/End: Original strand, 5699923 - 5700033
Alignment:
Q  594 acttcttaagagactccatcccacaaaatataaaattccatcgtttagacctat----------ttttaatttttcatatactcagaaaaatccgaaaaa 683  Q
    |||||||| | ||||||  ||| ||||||  |||||||||||||||||||||||          |||||||||||||||| |||||||||||| || |||    
T  5699923 acttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcatttattttaatttttcatattctcagaaaaatcagagaaa 5700022  T
Q  684 atttgcgttgg 694  Q
    |||||| ||||    
T  5700023 atttgcattgg 5700033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 658
Target Start/End: Original strand, 21981476 - 21981567
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctatttttaattttt 658  Q
    |||||||||||||||||| ||||| | |||| |||  |||||||||||  ||||||  ||||||| ||| |||||||  |||||| ||||||    
T  21981476 tcaaggatcaagactcccttagaatgaactttttataagactccatccgtcaaaattcaaaattctatcctttagactcattttttattttt 21981567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 4508073 - 4508031
Alignment:
Q  647 tttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||||| ||||||||||| || ||||||||||    
T  4508073 tttttaatttttcatattctcagaaaaattcggaaaaatttgc 4508031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 651
Target Start/End: Original strand, 16450518 - 16450600
Alignment:
Q  569 aaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt 651  Q
    |||||||||||||  | || || ||||| |||| ||||||||  ||  ||||||  |||||||||||||||||||||||||||    
T  16450518 aaggatcaagactttcttaaaagggactacttatgagactccgcccatcaaaatccaaaattccatcgtttagacctattttt 16450600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Original strand, 23407131 - 23407168
Alignment:
Q  652 aatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||| || ||||||||||||||||||||||    
T  23407131 aatttttcatattcttagaaaaatccgaaaaaatttgc 23407168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 29519665 - 29519706
Alignment:
Q  648 ttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  29519665 ttttaatttttcatattctcataaaaatccaaaaaaatttgc 29519706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 33413395 - 33413358
Alignment:
Q  513 ctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  33413395 ctacttgatcggattgctctgaaacttccccaaaaaat 33413358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 333 - 658
Target Start/End: Complemental strand, 3482 - 3163
Alignment:
Q  333 aacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatgg 432  Q
    ||||||||||||| |  || ||||||||||||||| ||||||| ||| ||||   || ||||  |||| ||||||||||| ||  ||| |||||||| ||    
T  3482 aacaccctttttcaa--ggtaaaacagttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttaggg 3385  T
Q  433 acaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaa-aaaattgggtttttggcctacttgatcggattgctc 531  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||| |||||  |||||| || |||||||||| ||||||||    
T  3384 acaatattaatcttcgtaactctcatccttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctc 3285  T
Q  532 cgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattc 631  Q
     ||||| |||||| ||||| ||| |          | ||||| || ||| ||| ||||| |||||||||| | ||| ||| ||| ||||||  |||||||    
T  3284 tgaaacttccccagaaaatcagaaa-----aaaatttaaggaccatgacccccttagaagggacttcttatgggaccccacccctcaaaatccaaaattc 3190  T
Q  632 catcgtttagacctatttttaattttt 658  Q
    ||||||||||||| |||||||||||||    
T  3189 catcgtttagacccatttttaattttt 3163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 331 - 689
Target Start/End: Complemental strand, 9586 - 9228
Alignment:
Q  331 tgaacaccctttttccaagggaaaaacagttcggattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttat 430  Q
    ||||||||||||||| |||   ||||||||||||||| ||||||||||| ||||  |||| |||  |||  ||||||||||| ||| |||||||||||||    
T  9586 tgaacaccctttttcaaagt--aaaacagttcggattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcattttat 9489  T
Q  431 ggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgct 530  Q
    ||||||||||||| ||  ||||| ||||| || ||||||||||||||||||  |||||||||| |||||| || |||| ||  |||||||||||||||||    
T  9488 ggacaatattaatatttataactttcatcattctgttttgggtcattgttacatgttcttagttaaaaatcggattttcggattacttgatcggattgct 9389  T
Q  531 ccgaaacatccccaaaaaattagagagnnnnnnnnntcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaatt 630  Q
    | ||||| | || | ||||| |||||          ||||||| |  ||||||| ||| |||||||||||| | ||||||  ||| ||||||  |||||     
T  9388 ctgaaacttgcctagaaaatcagaga------aaattcaaggaccttgactcccttag-aaggacttcttacgggactccgcccctcaaaattcaaaata 9296  T
Q  631 ccatcgtttagacc---------tatttttaatttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||||||||         | ||||||||||||||||| |||||||||||||||||||||||||    
T  9295 ccatcgtttagacccattcttaatttttttaatttttcatattctcagaaaaatccgaaaaaatttgc 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 93; Significance: 7e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 402 - 550
Target Start/End: Original strand, 140624 - 140772
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaatt 501  Q
    ||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||     
T  140624 catgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaaaatc 140723  T
Q  502 gggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    |||||||  | ||||||||||||||||||||||||| |||||| |||||    
T  140724 gggttttcagactacttgatcggattgctccgaaacttccccagaaaat 140772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 364 - 550
Target Start/End: Complemental strand, 142021 - 141836
Alignment:
Q  364 gattttataatccgaattgtactagcacaaaagctaatcatgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctta 463  Q
    |||| ||||||||||| ||||  ||||||||  |||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||     
T  142021 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttc 141922  T
Q  464 tgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatcggattgctccgaaacatccccaaaaaat 550  Q
    || ||||||||||||||   |||||||||| |||||| |||||||  | ||||||||||||||||||||||||| |||||| |||||    
T  141921 tg-tttgggtcattgttgcatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttccccagaaaat 141836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 655 - 689
Target Start/End: Complemental strand, 141755 - 141721
Alignment:
Q  655 ttttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||||| |||||||||||||||||||||||||    
T  141755 ttttcatattctcagaaaaatccgaaaaaatttgc 141721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 537
Target Start/End: Original strand, 4512 - 4645
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgg 503  Q
    ||||||||| ||  ||||||||||||  ||| |||||||||||| ||||  ||||| ||||||||  |||||||||||||||||| ||||  |||||  |    
T  4512 tgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcattatgtttgaggtcattgttagttgttcctagtccaaaatacg 4611  T
Q  504 gtttttggcctacttgatcggattgctccgaaac 537  Q
    |||||||  ||| |||||||||||||||||||||    
T  4612 gtttttgagctatttgatcggattgctccgaaac 4645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 402 - 462
Target Start/End: Original strand, 23241 - 23301
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatcctt 462  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  23241 catgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 23301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 689
Target Start/End: Complemental strand, 174222 - 174090
Alignment:
Q  567 tcaaggatcaagactcccgtagaaaggacttcttaagagactccatcccacaaaatataaaattccatcgtttagacctattttt----------aattt 656  Q
    ||||||| || |||||| |||||| |||||||||| ||||||||  ||| ||||||  |||||||||||||||||||  ||||||          |||||    
T  174222 tcaaggaccatgactcctgtagaagggacttcttacgagactccgcccctcaaaattcaaaattccatcgtttagacacatttttcaatttttaaaattt 174123  T
Q  657 ttcatatactcagaaaaatccgaaaaaatttgc 689  Q
    ||||||| |||||||||||| ||||||||||||    
T  174122 ttcatattctcagaaaaatcagaaaaaatttgc 174090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 522
Target Start/End: Complemental strand, 2049 - 1963
Alignment:
Q  436 atattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctacttgatc 522  Q
    ||||||||||||||||||| ||||||| || ||  ||||||||||||||| | ||||| || |||| |||||| ||  |||||||||    
T  2049 atattaatcttcctaactcacatccttctgattaaggtcattgttagttggttttagtcaataattcggttttcggattacttgatc 1963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 59499 - 59551
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactc 454  Q
    ||||||||| | ||| |||||||||||| |||||||||||||||| |||||||    
T  59499 catgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

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Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 59990 - 59938
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactc 454  Q
    ||||||||||| ||  ||||||||||||  |||||||||||||||||||||||    
T  59990 catgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactc 59938  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 205826 - 205759
Alignment:
Q  402 catgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgtttt 469  Q
    ||||||||||| ||   ||||||||||| ||| |||||||||||||||| || |||||||| ||||||    
T  205826 catgtttgtaacattggtagtcattttaaggataatattaatcttcctagctttcatccttgtgtttt 205759  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 521
Target Start/End: Complemental strand, 100917 - 100814
Alignment:
Q  418 atagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttgttcttagtaaaaaattgggtttttggcctact 517  Q
    ||||||| |||| || | |||| ||||||||||||||  ||||||  ||| | ||||||| ||||||||||  ||||||||||| |||||| || ||| |    
T  100917 atagtcagtttaagggccatatcaatcttcctaactcatatccttccgttctaggtcatttttagttgttcccagtaaaaaattcggttttcggactatt 100818  T
Q  518 tgat 521  Q
    ||||    
T  100817 tgat 100814  T

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Target: scaffold0770 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 687
Target Start/End: Original strand, 4185 - 4218
Alignment:
Q  654 tttttcatatactcagaaaaatccgaaaaaattt 687  Q
    |||||||||| |||||||||||||||||||||||    
T  4185 tttttcatattctcagaaaaatccgaaaaaattt 4218  T

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Target: scaffold0466 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 485
Target Start/End: Original strand, 8835 - 8915
Alignment:
Q  404 tgtttgtaatatgaatagtcattttatggacaatattaatcttcctaactctcatccttatgttttgggtcattgttagttg 485  Q
    ||||||||| ||| |||| |||||||||||  |||||| || ||||||| | ||||||| |||||| | |||||||||||||    
T  8835 tgtttgtaacatggatagccattttatggaacatattattcatcctaac-cccatccttgtgttttagatcattgttagttg 8915  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 687
Target Start/End: Original strand, 102489 - 102522
Alignment:
Q  654 tttttcatatactcagaaaaatccgaaaaaattt 687  Q
    |||||||||| |||||||||||||||||||||||    
T  102489 tttttcatattctcagaaaaatccgaaaaaattt 102522  T

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