View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19755_low_59 (Length: 249)

Name: NF19755_low_59
Description: NF19755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19755_low_59
NF19755_low_59
[»] chr1 (34 HSPs)
chr1 (48-197)||(25990266-25990414)
chr1 (134-194)||(45701327-45701387)
chr1 (134-185)||(29233985-29234036)
chr1 (134-189)||(42045379-42045434)
chr1 (134-192)||(7158772-7158830)
chr1 (132-182)||(42888572-42888622)
chr1 (136-189)||(29987119-29987172)
chr1 (134-182)||(1605395-1605443)
chr1 (135-183)||(25086483-25086531)
chr1 (134-185)||(39452459-39452511)
chr1 (135-182)||(34521204-34521251)
chr1 (138-181)||(40735020-40735063)
chr1 (134-181)||(48681948-48681995)
chr1 (135-181)||(3393583-3393629)
chr1 (135-181)||(48100722-48100768)
chr1 (134-179)||(1794595-1794640)
chr1 (135-196)||(11410627-11410688)
chr1 (134-183)||(16533046-16533095)
chr1 (136-193)||(17188671-17188728)
chr1 (135-184)||(28832183-28832232)
chr1 (132-189)||(32950768-32950825)
chr1 (145-182)||(32962573-32962610)
chr1 (136-185)||(40227830-40227879)
chr1 (134-179)||(50595900-50595945)
chr1 (134-182)||(5907798-5907846)
chr1 (136-184)||(10889354-10889402)
chr1 (134-178)||(14520943-14520987)
chr1 (134-182)||(16826353-16826401)
chr1 (134-178)||(24695558-24695602)
chr1 (134-185)||(24752658-24752710)
chr1 (134-182)||(28032283-28032331)
chr1 (134-182)||(44243872-44243920)
chr1 (134-182)||(45140020-45140068)
chr1 (134-178)||(52043272-52043316)
[»] chr7 (31 HSPs)
chr7 (16-105)||(42054829-42054918)
chr7 (134-181)||(13955479-13955526)
chr7 (134-184)||(44558786-44558836)
chr7 (134-183)||(27993042-27993091)
chr7 (134-191)||(30463954-30464011)
chr7 (145-182)||(44595652-44595689)
chr7 (141-189)||(3671830-3671878)
chr7 (134-182)||(19416513-19416561)
chr7 (134-178)||(23198767-23198811)
chr7 (134-178)||(46207759-46207803)
chr7 (134-178)||(47589571-47589615)
chr7 (135-181)||(3533023-3533069)
chr7 (155-185)||(6565545-6565575)
chr7 (159-189)||(19036109-19036139)
chr7 (159-189)||(20718497-20718527)
chr7 (135-189)||(37516809-37516863)
chr7 (159-193)||(48007550-48007584)
chr7 (134-179)||(20131843-20131888)
chr7 (156-189)||(30753747-30753780)
chr7 (136-189)||(36341072-36341125)
chr7 (134-182)||(1079706-1079754)
chr7 (134-178)||(6528823-6528867)
chr7 (134-182)||(7670433-7670481)
chr7 (141-181)||(9522918-9522958)
chr7 (134-182)||(10244726-10244774)
chr7 (134-193)||(20243254-20243314)
chr7 (134-186)||(31885955-31886007)
chr7 (134-182)||(33473535-33473583)
chr7 (141-181)||(47342683-47342723)
chr7 (134-178)||(47677595-47677639)
chr7 (129-181)||(48069852-48069904)
[»] chr5 (26 HSPs)
chr5 (129-196)||(26590701-26590768)
chr5 (135-193)||(18489079-18489137)
chr5 (134-188)||(16193106-16193160)
chr5 (134-182)||(6624775-6624823)
chr5 (157-189)||(12218292-12218324)
chr5 (129-189)||(22665210-22665270)
chr5 (129-181)||(27903107-27903159)
chr5 (134-182)||(28207131-28207179)
chr5 (134-177)||(6234819-6234862)
chr5 (135-182)||(10704345-10704392)
chr5 (134-189)||(39980507-39980562)
chr5 (135-197)||(32675292-32675354)
chr5 (129-182)||(39529441-39529495)
chr5 (134-183)||(8350669-8350718)
chr5 (134-175)||(8410466-8410507)
chr5 (134-179)||(22619873-22619918)
chr5 (136-181)||(25385053-25385098)
chr5 (144-185)||(31708157-31708198)
chr5 (129-197)||(32283573-32283642)
chr5 (134-182)||(18278273-18278321)
chr5 (134-182)||(18589881-18589929)
chr5 (141-181)||(31602840-31602880)
chr5 (129-181)||(32622889-32622941)
chr5 (134-182)||(32858669-32858717)
chr5 (134-182)||(37932329-37932377)
chr5 (158-186)||(38437898-38437926)
[»] chr6 (22 HSPs)
chr6 (128-196)||(24269876-24269944)
chr6 (134-182)||(12333582-12333630)
chr6 (134-182)||(20847525-20847573)
chr6 (134-182)||(21373420-21373468)
chr6 (134-182)||(26320577-26320625)
chr6 (129-181)||(32193874-32193926)
chr6 (134-185)||(4494882-4494933)
chr6 (134-181)||(9444956-9445003)
chr6 (134-181)||(12266794-12266841)
chr6 (134-185)||(20744137-20744188)
chr6 (134-181)||(26587391-26587438)
chr6 (134-181)||(33938694-33938741)
chr6 (159-189)||(12582236-12582266)
chr6 (135-193)||(12700424-12700482)
chr6 (135-189)||(21936040-21936094)
chr6 (134-184)||(29335587-29335637)
chr6 (134-184)||(30639438-30639488)
chr6 (137-185)||(1769770-1769818)
chr6 (134-182)||(9111046-9111094)
chr6 (134-186)||(14350948-14351000)
chr6 (134-182)||(16130764-16130812)
chr6 (134-182)||(21296757-21296805)
[»] chr3 (25 HSPs)
chr3 (134-182)||(22722401-22722449)
chr3 (134-193)||(21506761-21506820)
chr3 (141-196)||(52575953-52576008)
chr3 (132-182)||(32629077-32629127)
chr3 (124-182)||(32909315-32909373)
chr3 (135-196)||(53996299-53996360)
chr3 (134-182)||(25340938-25340986)
chr3 (134-182)||(28244118-28244166)
chr3 (134-182)||(43345021-43345069)
chr3 (134-182)||(43490431-43490479)
chr3 (134-182)||(44579635-44579683)
chr3 (134-185)||(32843273-32843324)
chr3 (135-181)||(7202931-7202977)
chr3 (129-179)||(14827519-14827569)
chr3 (135-181)||(42269298-42269344)
chr3 (134-195)||(7938723-7938784)
chr3 (159-196)||(28130934-28130971)
chr3 (136-189)||(49710721-49710774)
chr3 (136-181)||(51505874-51505919)
chr3 (141-189)||(977948-977996)
chr3 (134-182)||(3149090-3149138)
chr3 (134-186)||(8942016-8942068)
chr3 (134-182)||(10498709-10498757)
chr3 (141-185)||(25441511-25441555)
chr3 (129-196)||(38471087-38471155)
[»] chr2 (28 HSPs)
chr2 (136-181)||(16221361-16221406)
chr2 (135-185)||(41859852-41859902)
chr2 (132-185)||(23718932-23718985)
chr2 (132-185)||(24106604-24106657)
chr2 (138-179)||(29133501-29133542)
chr2 (134-189)||(7201506-7201561)
chr2 (134-189)||(22558976-22559031)
chr2 (134-181)||(24305320-24305367)
chr2 (134-181)||(27889288-27889335)
chr2 (136-174)||(1901507-1901545)
chr2 (134-196)||(4122013-4122075)
chr2 (134-196)||(9842202-9842264)
chr2 (129-182)||(19976147-19976201)
chr2 (141-179)||(33567667-33567705)
chr2 (134-184)||(42475122-42475172)
chr2 (134-184)||(43117202-43117252)
chr2 (134-175)||(17736792-17736833)
chr2 (134-179)||(32204543-32204588)
chr2 (134-179)||(34464426-34464471)
chr2 (134-190)||(9383215-9383271)
chr2 (134-182)||(12124544-12124592)
chr2 (134-182)||(25186256-25186304)
chr2 (135-179)||(30762512-30762556)
chr2 (134-190)||(32957549-32957605)
chr2 (134-190)||(34977203-34977259)
chr2 (156-184)||(36193956-36193984)
chr2 (134-178)||(40365424-40365468)
chr2 (141-185)||(41668661-41668705)
[»] chr4 (28 HSPs)
chr4 (134-182)||(35287521-35287569)
chr4 (134-182)||(9946426-9946474)
chr4 (141-185)||(16431622-16431666)
chr4 (134-182)||(38453264-38453312)
chr4 (135-182)||(3936627-3936674)
chr4 (135-182)||(19479491-19479538)
chr4 (135-182)||(28031812-28031859)
chr4 (134-185)||(52270041-52270092)
chr4 (134-184)||(2186345-2186395)
chr4 (136-182)||(11198329-11198375)
chr4 (135-181)||(28435263-28435309)
chr4 (136-182)||(37921747-37921793)
chr4 (134-180)||(44189003-44189049)
chr4 (127-185)||(48226509-48226567)
chr4 (141-182)||(241398-241439)
chr4 (134-179)||(9913898-9913943)
chr4 (134-179)||(12671765-12671810)
chr4 (129-182)||(20383482-20383535)
chr4 (134-179)||(32430140-32430185)
chr4 (134-182)||(10401410-10401458)
chr4 (134-182)||(14079251-14079298)
chr4 (138-182)||(16304112-16304156)
chr4 (134-182)||(19588153-19588201)
chr4 (157-193)||(34033355-34033391)
chr4 (134-182)||(37193248-37193296)
chr4 (134-182)||(40070982-40071030)
chr4 (135-183)||(49021766-49021814)
chr4 (134-182)||(54857629-54857677)
[»] scaffold0154 (2 HSPs)
scaffold0154 (129-196)||(37529-37596)
scaffold0154 (134-196)||(10757-10819)
[»] scaffold0012 (2 HSPs)
scaffold0012 (134-189)||(118818-118873)
scaffold0012 (134-190)||(242302-242358)
[»] scaffold0735 (1 HSPs)
scaffold0735 (132-182)||(1525-1575)
[»] scaffold0122 (1 HSPs)
scaffold0122 (127-181)||(14201-14255)
[»] scaffold0031 (1 HSPs)
scaffold0031 (134-184)||(47253-47303)
[»] chr8 (18 HSPs)
chr8 (129-175)||(26885659-26885705)
chr8 (132-181)||(30694454-30694503)
chr8 (134-182)||(24023429-24023477)
chr8 (129-193)||(37750002-37750066)
chr8 (134-185)||(1644684-1644735)
chr8 (134-189)||(6447188-6447243)
chr8 (134-181)||(8717490-8717537)
chr8 (134-181)||(32555253-32555300)
chr8 (134-185)||(39433409-39433460)
chr8 (135-196)||(2554212-2554273)
chr8 (132-181)||(14279586-14279635)
chr8 (145-193)||(11052986-11053034)
chr8 (135-183)||(12910819-12910867)
chr8 (134-182)||(14975877-14975925)
chr8 (145-185)||(24023823-24023863)
chr8 (134-182)||(29499770-29499818)
chr8 (129-189)||(37938659-37938719)
chr8 (138-182)||(40919373-40919417)
[»] scaffold0352 (1 HSPs)
scaffold0352 (134-182)||(12643-12691)
[»] scaffold0259 (1 HSPs)
scaffold0259 (138-185)||(5416-5463)
[»] scaffold0188 (1 HSPs)
scaffold0188 (134-185)||(28124-28175)
[»] scaffold0016 (1 HSPs)
scaffold0016 (142-181)||(204597-204636)
[»] scaffold0180 (1 HSPs)
scaffold0180 (128-182)||(17725-17779)
[»] scaffold0334 (1 HSPs)
scaffold0334 (135-184)||(5182-5231)
[»] scaffold0087 (1 HSPs)
scaffold0087 (134-183)||(44776-44825)
[»] scaffold0066 (1 HSPs)
scaffold0066 (135-196)||(17504-17565)
[»] scaffold0011 (1 HSPs)
scaffold0011 (134-179)||(185262-185307)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-182)||(223691-223739)


Alignment Details
Target: chr1 (Bit Score: 82; Significance: 8e-39; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 25990414 - 25990266
Alignment:
Q  48 atgtagacacatggggtttaattatagcattctcaatattgtcttagaaaaccatcttttatactaaaacataacttagaggttcacgtgagtttagctc 147  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| || || |  ||| |||    
T  25990414 atgtagagacatgaggtttaattatagtattctcaatattgtcttagaaaaccattttttatagtaaaacataacttagaggtcca-gtaaacttaactc 25990316  T
Q  148 agttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatccg 197  Q
    |||||||||| | |||| ||||||||| |||||||||||||| |||||||    
T  25990315 agttagcatggataatgtataaaatatacaaggtctggagttcgaatccg 25990266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 45701327 - 45701387
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaat 194  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||    
T  45701327 cgtgagtttagctcagttggtatgaacaatgcataaaatatgtaaggtctggagttcgaat 45701387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 29234036 - 29233985
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||||||    
T  29234036 cgtgagtttagctcagttggtatagacaatgcataaaatatgcaaggtctgg 29233985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 42045434 - 42045379
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||| ||||||||||| | ||| ||||||||||| |||||||||||||||||||    
T  42045434 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagtt 42045379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 7158772 - 7158830
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttga 192  Q
    |||||||||||| |||||   ||| |||||||||||||||||||||||| |||||||||    
T  7158772 cgtgagtttagcccagttgatatggacaatgcataaaatatgcaaggtccggagtttga 7158830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 42888572 - 42888622
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  42888572 cacgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 42888622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 29987172 - 29987119
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||| ||||||| ||| | ||||||||||| |||||||||||||||||||    
T  29987172 tgagtttaactcagttggcaaggacaatgcataatatatgcaaggtctggagtt 29987119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 1605395 - 1605443
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||| |||||| ||| ||||||||||||||||||||||||    
T  1605395 cgtgagcttagcttagttagtatggacaatgcataaaatatgcaaggtc 1605443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 25086483 - 25086531
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    ||||| ||||||||||| | ||| |||||||||||||||||||||||||    
T  25086483 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtct 25086531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 39452459 - 39452511
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcat-aaaatatgcaaggtctgg 185  Q
    |||||| ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  39452459 cgtgagcttagctcagttggtatgaacaatgcataaaaatatgcaaggtctgg 39452511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 34521251 - 34521204
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||||||||||||| | ||| ||||||||||| ||||||||||||    
T  34521251 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggtc 34521204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 40735063 - 40735020
Alignment:
Q  138 agtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||    
T  40735063 agtttagctcagttagtatggacaatgcataaaatatgtaaggt 40735020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 48681995 - 48681948
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| ||||||||||| | ||||||||||||||| |||||||||||    
T  48681995 cgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 48681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 3393629 - 3393583
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||||||||||   ||||||||||||||| |||||||||||    
T  3393629 gtgagtttagctcagttgatatgaacaatgcataatatatgcaaggt 3393583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 48100722 - 48100768
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||| ||||||||||| | ||| |||||||||||||||||||||||    
T  48100722 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggt 48100768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 1794595 - 1794640
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| ||||||||||||| ||| ||||||||||| |||||||||    
T  1794595 cgtgagcttagctcagttagtatggacaatgcataatatatgcaag 1794640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 11410627 - 11410688
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||| ||| ||||||| | ||||||||| ||||||||||| ||||||||| ||| ||||||    
T  11410627 gtgagcttaactcagttggtatgaacaatacataaaatatgtaaggtctggggttcgaatcc 11410688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 16533095 - 16533046
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    |||||||||||||| ||| | | ||||||||||||| |||||||||||||    
T  16533095 cgtgagtttagctcggttggtaggaacaatgcataatatatgcaaggtct 16533046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 17188728 - 17188671
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    |||| ||||||||||| | ||| ||||||||||||||||| ||||| | |||||||||    
T  17188728 tgagcttagctcagttggtatggacaatgcataaaatatgtaaggtttagagtttgaa 17188671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 28832232 - 28832183
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    ||||| ||| ||||||| | ||||||||||||||| ||||||||||||||    
T  28832232 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctg 28832183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 32950825 - 32950768
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||| ||| ||||||| | || |||||||||||| |||||||||||| ||||||    
T  32950825 cacgtgagcttaactcagttggtataaacaatgcataatatatgcaaggtccggagtt 32950768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 32962573 - 32962610
Alignment:
Q  145 ctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  32962573 ctcagttggtatgaacaatgcataaaatatgcaaggtc 32962610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 40227830 - 40227879
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||| ||||||||||| | ||| |||||||||||||||| ||||||||||    
T  40227830 tgagcttagctcagttggtatggacaatgcataaaatatacaaggtctgg 40227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 50595945 - 50595900
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| |||||||| || | |||||||||||||||||||||||||    
T  50595945 cgtgagcttagctcaattggtatgaacaatgcataaaatatgcaag 50595900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 5907798 - 5907846
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| ||| | ||||||||||| ||||||||||||    
T  5907798 cgtgagcttagctcagttggcaaggacaatgcataatatatgcaaggtc 5907846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 10889402 - 10889354
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||| ||||||| ||| | ||||| ||||||||||||||||||||||||    
T  10889402 tgagcttagctcggttggaatgaagaatgcataaaatatgcaaggtctg 10889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 14520943 - 14520987
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||    
T  14520943 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 14520987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 16826353 - 16826401
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||||||||   ||| ||||||||||||||||||||||||    
T  16826353 cgtgagcttagctcagttgctatggacaatgcataaaatatgcaaggtc 16826401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 24695558 - 24695602
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||||||||||||||| | ||||||||| ||||| ||||||||    
T  24695558 cgtgagtttagctcagttggtatgaacaatacataatatatgcaa 24695602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 24752710 - 24752658
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataa-aatatgcaaggtctgg 185  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  24752710 cgtgagcttagctcagttggtatggacaatgcataataatatgcaaggtctgg 24752658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 28032283 - 28032331
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||| ||||| |  |||||||||||| ||||||||||||    
T  28032283 cgtgagtttagctcggttagtaaaaacaatgcataatatatgcaaggtc 28032331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 44243872 - 44243920
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| | | ||||||||||||| ||||| ||||||    
T  44243872 cgtgagtttagctcagttggtaggaacaatgcataatatatgtaaggtc 44243920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 45140068 - 45140020
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||    
T  45140068 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 45140020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 52043272 - 52043316
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||||||||||||||| | ||| | ||||||||||||||||||    
T  52043272 cgtgagtttagctcagttggtatggataatgcataaaatatgcaa 52043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 42054918 - 42054829
Alignment:
Q  16 agaaaaaagaactgattagtacatannnnnnnatgtagacacatggggtttaattatagcattctcaatattgtcttagaaaaccatctt 105  Q
    ||||||||||| |||||||| ||||       || |||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  42054918 agaaaaaagaaatgattagtgcataggtttttatatagacacatggggtttaattataatattctcaatattctcttagaaaaccatctt 42054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 13955479 - 13955526
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||    
T  13955479 cgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggt 13955526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 44558836 - 44558786
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||||||||||||||| | ||| ||||||||||| ||||||||||||||    
T  44558836 cgtgagtttagctcagttggtatggacaatgcataatatatgcaaggtctg 44558786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 27993091 - 27993042
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    |||||| ||| ||||||| | |||||||||||||||||||||||||||||    
T  27993091 cgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtct 27993042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 30464011 - 30463954
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttg 191  Q
    |||||||||||||||||||| ||  | ||||||||| |||||||||||||| ||||||    
T  30464011 cgtgagtttagctcagttagtatagataatgcataatatatgcaaggtctgaagtttg 30463954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 44595689 - 44595652
Alignment:
Q  145 ctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44595689 ctcagttagtatgaacaatgcataaaatatgcaaggtc 44595652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 3671830 - 3671878
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    ||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  3671830 ttagctcagtcggtatgaacaatgcataatatatgcaaggtctggagtt 3671878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 19416513 - 19416561
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  19416513 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 19416561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 23198811 - 23198767
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||    
T  23198811 cgtgagtttaactcagttggtatgaacaatgcataaaatatgcaa 23198767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 46207759 - 46207803
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||    
T  46207759 cgtgagcttagctcagttggtatgaacaatgcataaaatatgcaa 46207803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 47589615 - 47589571
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||    
T  47589615 cgtgagcttagctcagttggtatgaacaatgcataaaatatgcaa 47589571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 3533069 - 3533023
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||||||||||| | | ||||||||||| |||||||||||    
T  3533069 gtgagtttagctcagttagtaaggacaatgcataatatatgcaaggt 3533023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 6565545 - 6565575
Alignment:
Q  155 atgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||||||||||||||||||||||||||||    
T  6565545 atgaacaatgcataaaatatgcaaggtctgg 6565575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 19036139 - 19036109
Alignment:
Q  159 acaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||||||||||||||||||||||||    
T  19036139 acaatgcataaaatatgcaaggtctggagtt 19036109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Original strand, 20718497 - 20718527
Alignment:
Q  159 acaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||||||||||||||||||||||||    
T  20718497 acaatgcataaaatatgcaaggtctggagtt 20718527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 37516863 - 37516809
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    ||||| ||| ||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  37516863 gtgagcttaactcagttagtatggacaatgcataacatatgcaaggtccggagtt 37516809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 48007584 - 48007550
Alignment:
Q  159 acaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    ||||||||||| |||||||||||||||||||||||    
T  48007584 acaatgcataatatatgcaaggtctggagtttgaa 48007550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 20131843 - 20131888
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| ||||||||||| ||||||||||||||||| ||| |||||    
T  20131843 cgtgagcttagctcagttggcatgaacaatgcataatatacgcaag 20131888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 30753747 - 30753780
Alignment:
Q  156 tgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||||||||||||| |||||||||||||    
T  30753747 tgaacaatgcataaaatatgtaaggtctggagtt 30753780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 36341125 - 36341072
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||| ||| ||||||| | |||||||||||||||||||| ||||||| ||||||    
T  36341125 tgagcttaactcagttggtatgaacaatgcataaaatatacaaggtccggagtt 36341072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 1079754 - 1079706
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||| |||||||||   ||||||||||||||||||||||||||    
T  1079754 cgtgagcttaactcagttagttggaacaatgcataaaatatgcaaggtc 1079706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 6528867 - 6528823
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||    
T  6528867 cgtgagtctagctcagttggtatggacaatgcataaaatatgcaa 6528823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 7670433 - 7670481
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| |  |||||||||||||| ||||||||||||    
T  7670433 cgtgagcttagctcagttggtttgaacaatgcataatatatgcaaggtc 7670481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 9522918 - 9522958
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||| | ||||||||||||||| |||||||||||    
T  9522918 ttagctcagttggtatgaacaatgcataatatatgcaaggt 9522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 10244726 - 10244774
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||    
T  10244726 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 10244774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 20243254 - 20243314
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataa-aatatgcaaggtctggagtttgaa 193  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||| || |||||||    
T  20243254 cgtgagcttagctcagttggtatggacaatgcataataatatgcaaggtccggggtttgaa 20243314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 31886007 - 31885955
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgga 186  Q
    ||||||||||| |||||| | ||||||||||||||| ||||| ||| ||||||    
T  31886007 cgtgagtttagttcagttggtatgaacaatgcataatatatgtaagatctgga 31885955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 33473583 - 33473535
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||||||| ||||| |||| | ||||||||||| ||||||||||||    
T  33473583 cgtgagtttagttcagtcagcaaggacaatgcataatatatgcaaggtc 33473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 47342683 - 47342723
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||| | ||| |||||||||||||||||||||||    
T  47342683 ttagctcagttggtatggacaatgcataaaatatgcaaggt 47342723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 47677639 - 47677595
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||||||||||||||| |   ||||||||||||||||||||||    
T  47677639 cgtgagtttagctcagttggttagaacaatgcataaaatatgcaa 47677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 48069904 - 48069852
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||| |||||| |||||||||||  |||||||||||||||| ||||| |||||    
T  48069904 gttctcgtgagcttagctcagttgacatgaacaatgcataatatatgtaaggt 48069852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 26590701 - 26590768
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    |||| ||||||||||||| |||||||| | ||||||||||| ||||||||||||||| ||||||||||    
T  26590701 gttctcgtgagtttagcttagttagcaaggacaatgcataatatatgcaaggtctggggtttgaatcc 26590768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 18489137 - 18489079
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    ||||||||||||||||| | ||  ||||||||||| |||||||||||||||||||||||    
T  18489137 gtgagtttagctcagttggtatagacaatgcataatatatgcaaggtctggagtttgaa 18489079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 16193106 - 16193160
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagt 188  Q
    ||||||||||| |||||| | ||||||||||||||||||||| ||||| ||||||    
T  16193106 cgtgagtttagttcagttggtatgaacaatgcataaaatatgtaaggtttggagt 16193160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 6624775 - 6624823
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| ||||| ||||||||||| ||||||||||||    
T  6624775 cgtgagcttagctcagttggcatggacaatgcataatatatgcaaggtc 6624823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 12218324 - 12218292
Alignment:
Q  157 gaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||||||||||||||||||||||||||    
T  12218324 gaacaatgcataaaatatgcaaggtctggagtt 12218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 22665270 - 22665210
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||| |||||| ||||||||||||| ||| |||||| |||||||||||||| || ||||||    
T  22665270 gttctcgtgagcttagctcagttagtatggacaatgtataaaatatgcaagatccggagtt 22665210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 27903107 - 27903159
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||| ||||||||||| |||||| | ||||||||||||||| |||||||||||    
T  27903107 gttctcgtgagtttagttcagttggtatgaacaatgcataatatatgcaaggt 27903159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 28207131 - 28207179
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  28207131 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 28207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 6234862 - 6234819
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgca 177  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||    
T  6234862 cgtgagcttagctcagttagtatgaacaatgcataatatatgca 6234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 10704392 - 10704345
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  10704392 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 10704345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 39980507 - 39980562
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||| ||||||||||| | ||| | |||||||||||||||||||||| ||||||    
T  39980507 cgtgagcttagctcagttggtatggataatgcataaaatatgcaaggtccggagtt 39980562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 32675354 - 32675292
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatccg 197  Q
    ||||| |||| |||||| ||| ||||||||||||| ||||||||||||| | ||| |||||||    
T  32675354 gtgagcttagttcagttggcaagaacaatgcataatatatgcaaggtctagggttcgaatccg 32675292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 39529441 - 39529495
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcat-aaaatatgcaaggtc 182  Q
    |||| |||||| ||||||||||||||| | ||||||||| |||||||||||||||    
T  39529441 gttctcgtgagcttagctcagttagcagggacaatgcataaaaatatgcaaggtc 39529495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 8350669 - 8350718
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    |||||||||| ||||||| ||||| ||||||||||| |||||||| ||||    
T  8350669 cgtgagtttaactcagttggcatggacaatgcataatatatgcaaagtct 8350718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 8410507 - 8410466
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatg 175  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  8410507 cgtgagcttagctcagttagtgtgaacaatgcataaaatatg 8410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 22619873 - 22619918
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| ||||||||||| | |||||||||||||||||||| ||||    
T  22619873 cgtgagcttagctcagttggtatgaacaatgcataaaatatacaag 22619918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 25385053 - 25385098
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||| |||| || | |||||||||||||||||||||||||||    
T  25385053 tgagtttaactcaattggtatgaacaatgcataaaatatgcaaggt 25385098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 31708198 - 31708157
Alignment:
Q  144 gctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||||| | ||||||||||||||| |||||||||||||||    
T  31708198 gctcagttggtatgaacaatgcataatatatgcaaggtctgg 31708157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 32283573 - 32283642
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataa-aatatgcaaggtctggagtttgaatccg 197  Q
    |||| |||||| ||||||||||| | ||| ||||||||||| |||||| |||||||| |||| |||||||    
T  32283573 gttctcgtgagcttagctcagttggtatggacaatgcataataatatgtaaggtctgaagttcgaatccg 32283642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 18278321 - 18278273
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||| ||||||| | | ||||||||||||| ||||||||||||    
T  18278321 cgtgagtttaactcagttggtaagaacaatgcataatatatgcaaggtc 18278273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 18589929 - 18589881
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||    
T  18589929 cgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtc 18589881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 31602880 - 31602840
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||| | ||||||||||||||| |||||||||||    
T  31602880 ttagctcagttggtatgaacaatgcataatatatgcaaggt 31602840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 32622889 - 32622941
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||| ||||| |||||||||||| | ||| |||||| ||||||||||||||||    
T  32622889 gttctcgtgaatttagctcagttggtatggacaatgtataaaatatgcaaggt 32622941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 32858669 - 32858717
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||| ||| | ||| ||||||||||||||||||||||||    
T  32858669 cgtgagcttagctccgttggtatggacaatgcataaaatatgcaaggtc 32858717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 37932329 - 37932377
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||    
T  37932329 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 37932377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Complemental strand, 38437926 - 38437898
Alignment:
Q  158 aacaatgcataaaatatgcaaggtctgga 186  Q
    |||||||||||||||||||||||||||||    
T  38437926 aacaatgcataaaatatgcaaggtctgga 38437898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 24269876 - 24269944
Alignment:
Q  128 ggttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||| |||||| ||||||||||||| ||| |||||||||||||||||||||||  || ||||||||||    
T  24269876 ggttctcgtgagcttagctcagttagtatggacaatgcataaaatatgcaaggttcggggtttgaatcc 24269944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 12333630 - 12333582
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  12333630 cgtgagcttagctcagttagtatggacaatgcataaaatatgcaaggtc 12333582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 20847573 - 20847525
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||||||||||  || ||||||||||||||||||||||||    
T  20847573 cgtgagcttagctcagttagtttggacaatgcataaaatatgcaaggtc 20847525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 21373468 - 21373420
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||||||||||| || | ||| ||||||||||||||||||||||||    
T  21373468 cgtgagtttagctcaattggtatggacaatgcataaaatatgcaaggtc 21373420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 26320625 - 26320577
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  26320625 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 26320577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 32193926 - 32193874
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||| |||||||||||||||||| | | ||||||||||||| |||||||||||    
T  32193926 gttctcgtgagtttagctcagttggtaagaacaatgcataatatatgcaaggt 32193874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 4494933 - 4494882
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||| ||||||||||| | ||| |||||||||||||||||| ||||||||    
T  4494933 cgtgagcttagctcagttggtatggacaatgcataaaatatgcgaggtctgg 4494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 9444956 - 9445003
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| ||||||||||| | |||||||||| ||||||||||||||||    
T  9444956 cgtgagcttagctcagttggtatgaacaatgtataaaatatgcaaggt 9445003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 12266794 - 12266841
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  12266794 cgtgagtttaactcagttatcatgaacaatgcataatgtatgcaaggt 12266841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 20744137 - 20744188
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||| ||||||||||| | ||| ||||||||||| |||||||||||||||    
T  20744137 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctgg 20744188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 26587391 - 26587438
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||| ||||||||||||||| | ||||||||||||| |||||||||||    
T  26587391 cgtgggtttagctcagttagtaagaacaatgcataatatatgcaaggt 26587438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 33938741 - 33938694
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| ||||||||||| | ||||||||||||||| |||||||||||    
T  33938741 cgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 33938694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 12582266 - 12582236
Alignment:
Q  159 acaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||||||||||||||||||||||||    
T  12582266 acaatgcataaaatatgcaaggtctggagtt 12582236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 12700482 - 12700424
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    ||||| |||| |||||| | ||||||||||||||| ||||||||||||| | |||||||    
T  12700482 gtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtctagggtttgaa 12700424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 21936094 - 21936040
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    ||||||||||||||||| | | ||||||| ||||| |||||||||||| ||||||    
T  21936094 gtgagtttagctcagttggtaagaacaattcataatatatgcaaggtccggagtt 21936040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 29335637 - 29335587
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||| ||| ||||||||| || |||||||||||| ||||||||||||||    
T  29335637 cgtgagcttaactcagttagtataaacaatgcataatatatgcaaggtctg 29335587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 30639488 - 30639438
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||||||||||||||| | | ||| ||||||||| ||||||||||||||    
T  30639488 cgtgagtttagctcagttggtaggaataatgcataatatatgcaaggtctg 30639438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 1769770 - 1769818
Alignment:
Q  137 gagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||| |||||||  || | |||||||||||||||||||||||||||    
T  1769770 gagtttaactcagttgacaaggacaatgcataaaatatgcaaggtctgg 1769818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 9111046 - 9111094
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||| |||||| | ||||||||||||||| ||||||||||||    
T  9111046 cgtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtc 9111094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 14350948 - 14351000
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgga 186  Q
    |||||||||| |||||||   |||||||||||||||||||| |||||| ||||    
T  14350948 cgtgagtttaactcagttgatatgaacaatgcataaaatatacaaggtatgga 14351000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 16130764 - 16130812
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  16130764 cgtgagcttagcttagttggtatggacaatgcataaaatatgcaaggtc 16130812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 21296757 - 21296805
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| |   | ||||||||||||||||||||||||    
T  21296757 cgtgagtttagctcagttggttgggacaatgcataaaatatgcaaggtc 21296805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 22722401 - 22722449
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  22722401 cgtgagcttagctcagttagtatgaacaatgcataaaatatgcaaggtc 22722449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 21506820 - 21506761
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||||| |||||||    
T  21506820 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtctggggtttgaa 21506761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 52575953 - 52576008
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||    
T  52575953 ttagctcagttggtatgaacaatgcataaaatatgcaaggtctggggttcgaatcc 52576008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 32629077 - 32629127
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  32629077 cacgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 32629127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 32909373 - 32909315
Alignment:
Q  124 tagaggttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||| |||| |||||| ||| ||||||||| ||| ||||||||||||||||||||||||    
T  32909373 tagaagttctcgtgagcttaactcagttagtatggacaatgcataaaatatgcaaggtc 32909315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 53996299 - 53996360
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||| ||||||||||| | ||| ||||||||||| ||||||||||||||| ||| ||||||    
T  53996299 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaatcc 53996360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 25340986 - 25340938
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  25340986 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 25340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 28244166 - 28244118
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||| ||||||| | ||||||||||||||||||||||||||||    
T  28244166 cgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtc 28244118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 43345069 - 43345021
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| | ||||||||| ||||| ||||||||||||    
T  43345069 cgtgagtttagctcagttggtatgaacaatacataatatatgcaaggtc 43345021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 43490479 - 43490431
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  43490479 cgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtc 43490431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 44579635 - 44579683
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  44579635 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 44579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 32843324 - 32843273
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||| ||||||||||| |  || |||||||||||||||||||||||||||    
T  32843324 cgtgagcttagctcagttggtttggacaatgcataaaatatgcaaggtctgg 32843273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 7202977 - 7202931
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||||||||| |   |||||||||||||||||||||||||    
T  7202977 gtgagtttagctcagttggttggaacaatgcataaaatatgcaaggt 7202931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 14827519 - 14827569
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||| |||||| ||||||||||| | ||| |||||||||||||||||||||    
T  14827519 gttctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 14827569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 42269298 - 42269344
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||||||||||| ||| ||||||||||| ||||| |||||    
T  42269298 gtgagtttagctcagttagtatggacaatgcataatatatgtaaggt 42269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 7938723 - 7938784
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatc 195  Q
    |||||| |||| |||||| | ||||||||||||||| |||| |||||||||| ||| |||||    
T  7938723 cgtgagcttagttcagttggtatgaacaatgcataatatatacaaggtctggggttcgaatc 7938784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 28130971 - 28130934
Alignment:
Q  159 acaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  28130971 acaatgcataatatatgcaaggtctggggtttgaatcc 28130934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 49710721 - 49710774
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||| ||| ||||||| | || ||||||||||||||||||||||||| ||||||    
T  49710721 tgagcttaactcagttggtattaacaatgcataaaatatgcaaggtccggagtt 49710774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 51505874 - 51505919
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||||||||   ||| |||||||||||||||||||||||    
T  51505874 tgagtttagctcagttgatatggacaatgcataaaatatgcaaggt 51505919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 977996 - 977948
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    ||||||||||| | ||| ||||||||||| |||||||||||| ||||||    
T  977996 ttagctcagttggtatggacaatgcataatatatgcaaggtccggagtt 977948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 3149138 - 3149090
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||| ||||||| | ||||||||||||| ||||||||||||||    
T  3149138 cgtgagcttaactcagtttgtatgaacaatgcatcaaatatgcaaggtc 3149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 8942016 - 8942068
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgga 186  Q
    |||||| ||| ||||||| | ||||||||||||||| |||||||| |||||||    
T  8942016 cgtgagcttaactcagttggtatgaacaatgcataatatatgcaaagtctgga 8942068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 10498757 - 10498709
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||    
T  10498757 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 10498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 25441555 - 25441511
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||||||| | ||| ||||||||||| |||||||||||||||    
T  25441555 ttagctcagttggtatggacaatgcataatatatgcaaggtctgg 25441511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 38471087 - 38471155
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataa-aatatgcaaggtctggagtttgaatcc 196  Q
    |||| ||||||| ||||||| || | |||||||||| |||| |||||| ||||||||||||| ||||||    
T  38471087 gttctcgtgagtgtagctcaattggtatgaacaatgtataataatatgtaaggtctggagttcgaatcc 38471155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 16221406 - 16221361
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  16221406 tgagtttagctcagttggtatgaacaatgcataaaatatgcaaggt 16221361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 41859852 - 41859902
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||||||    
T  41859852 gtgagtttaactcagttggtatggacaatgcataaaatatgcaaggtctgg 41859902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 23718932 - 23718985
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||||||||||||||||    ||||||| ||||||||||||||||||||||    
T  23718932 cacgtgagtttagctcagttgatttgaacaacgcataaaatatgcaaggtctgg 23718985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 24106604 - 24106657
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||||||||||||||||    ||||||| ||||||||||||||||||||||    
T  24106604 cacgtgagtttagctcagttgatttgaacaacgcataaaatatgcaaggtctgg 24106657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 29133542 - 29133501
Alignment:
Q  138 agtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  29133542 agtttagctcagttggtatgaacaatgcataaaatatgcaag 29133501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 7201506 - 7201561
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||| ||||||||||| |  |||||||||||||| |||||||| ||||||||||    
T  7201506 cgtgagcttagctcagttggtttgaacaatgcataatatatgcaaagtctggagtt 7201561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 22558976 - 22559031
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||| ||||||| |  || |||||||||||||||| ||||||||||||||    
T  22558976 cgtgagtttaactcagttggtttggacaatgcataaaatatacaaggtctggagtt 22559031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 24305367 - 24305320
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| ||||||||||||  ||| |||||||||||||||||||||||    
T  24305367 cgtgagcttagctcagttaatatggacaatgcataaaatatgcaaggt 24305320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 27889288 - 27889335
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| |||| ||||||| |||||||||||||||||||||| |||||    
T  27889288 cgtgagcttagttcagttatcatgaacaatgcataaaatatgtaaggt 27889335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1901507 - 1901545
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatat 174  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  1901507 tgagtttaactcagttagtatgaacaatgcataaaatat 1901545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 4122075 - 4122013
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    |||||| ||||||||| | | ||| ||||||||||| ||||||||||||||| |||| |||||    
T  4122075 cgtgagcttagctcagctggtatggacaatgcataatatatgcaaggtctggggtttaaatcc 4122013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 9842264 - 9842202
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    |||||| ||||||||||| | | | ||||||||||||||||||||||| ||| ||| ||||||    
T  9842264 cgtgagcttagctcagttggtagggacaatgcataaaatatgcaaggtttggggttcgaatcc 9842202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 19976147 - 19976201
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataa-aatatgcaaggtc 182  Q
    |||| |||||||||||||||||| | ||| ||||||||||| |||||||||||||    
T  19976147 gttctcgtgagtttagctcagttggtatggacaatgcataataatatgcaaggtc 19976201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 33567667 - 33567705
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  33567667 ttagctcagttggcatgaacaatgcatgaaatatgcaag 33567705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 42475172 - 42475122
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||| ||| ||||||| | || |||||||||||||||||||||||||||    
T  42475172 cgtgagcttaactcagttggtataaacaatgcataaaatatgcaaggtctg 42475122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 43117252 - 43117202
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||||||||||||||| | | | ||||||||||| ||||||||||||||    
T  43117252 cgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtctg 43117202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 17736792 - 17736833
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatg 175  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  17736792 cgtgagcttagctcagttggtatgaacaatgcataaaatatg 17736833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 32204543 - 32204588
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||    
T  32204543 cgtgagcttagctcaattggcatgaacaatgcataatatatgcaag 32204588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 34464471 - 34464426
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||||||||||||||| | ||| ||||||||||| |||||||||    
T  34464471 cgtgagtttagctcagttggtatggacaatgcataatatatgcaag 34464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 9383271 - 9383215
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagttt 190  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||| ||| ||||    
T  9383271 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtttggggttt 9383215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 12124544 - 12124592
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| | | | ||||||||||| ||||||||||||    
T  12124544 cgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtc 12124592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 25186304 - 25186256
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||||||||||||||   ||| ||||||||||| ||||||||||||    
T  25186304 cgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtc 25186256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 30762556 - 30762512
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    ||||||||||||||||| | ||  |||||||||||||||||||||    
T  30762556 gtgagtttagctcagttggtatagacaatgcataaaatatgcaag 30762512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 32957605 - 32957549
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagttt 190  Q
    |||||||||||||| ||| | ||||||||||||||| ||||| ||||| ||| ||||    
T  32957605 cgtgagtttagctcggttggtatgaacaatgcataatatatgtaaggtttggggttt 32957549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 34977203 - 34977259
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagttt 190  Q
    |||||| ||| ||||||| | ||| ||||||||||| |||||||||||| |||||||    
T  34977203 cgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggagttt 34977259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 36193984 - 36193956
Alignment:
Q  156 tgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||||||||||||||||||||||||||    
T  36193984 tgaacaatgcataaaatatgcaaggtctg 36193956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 40365468 - 40365424
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaa 178  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||    
T  40365468 cgtgagcttagctcagttggtatgtacaatgcataaaatatgcaa 40365424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 41668661 - 41668705
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||||||| | ||||||||||||||| |||||||| ||||||    
T  41668661 ttagctcagttggtatgaacaatgcataatatatgcaaagtctgg 41668705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 35287569 - 35287521
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  35287569 cgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtc 35287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 9946426 - 9946474
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  9946426 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 9946474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 16431622 - 16431666
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||    
T  16431622 ttagctcagttggtatggacaatgcataaaatatgcaaggtctgg 16431666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 38453264 - 38453312
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| ||||| ||||||||||| ||||||||||||    
T  38453264 cgtgagcttagctcagttggcatggacaatgcataatatatgcaaggtc 38453312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 3936627 - 3936674
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  3936627 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtc 3936674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 19479538 - 19479491
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||| ||||||||||||  ||||||||||||||| ||||||||||||    
T  19479538 gtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtc 19479491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 28031812 - 28031859
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||||||||||||| |   ||||||||||||||||||||||||||    
T  28031812 gtgagtttagctcagttggttggaacaatgcataaaatatgcaaggtc 28031859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 52270092 - 52270041
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||| ||||||||||| | ||| ||||||||||| |||||||||||||||    
T  52270092 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctgg 52270041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 2186395 - 2186345
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||| ||||||||||| | ||| ||||||||||| ||||||||||||||    
T  2186395 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctg 2186345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 11198329 - 11198375
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  11198329 tgagtttagctcagttagaatggacaaggcataatatatgcaaggtc 11198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 28435309 - 28435263
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||||||||| | ||| ||||||||||| |||||||||||    
T  28435309 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggt 28435263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 37921747 - 37921793
Alignment:
Q  136 tgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| | | ||||||||||| ||||||||||||    
T  37921747 tgagtttagctcagttagtaaggacaatgcataatatatgcaaggtc 37921793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 44189049 - 44189003
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaagg 180  Q
    |||||||||||||||||| ||||| | ||||||||| ||||||||||    
T  44189049 cgtgagtttagctcagttggcatggataatgcataatatatgcaagg 44189003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 48226567 - 48226509
Alignment:
Q  127 aggttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||| |||||||  |||||||| || | ||| |||||||||||||||||||||||||||    
T  48226567 aggtccacgtgaacttagctcaattggtatggacaatgcataaaatatgcaaggtctgg 48226509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 241439 - 241398
Alignment:
Q  141 ttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||||| ||| | ||||||||||||||||||||||||||||    
T  241439 ttagctcggttggtatgaacaatgcataaaatatgcaaggtc 241398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 9913898 - 9913943
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| ||||||||||| | |||||||||||||||||||| ||||    
T  9913898 cgtgagcttagctcagttggtatgaacaatgcataaaatatacaag 9913943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12671810 - 12671765
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||    
T  12671810 cgtgagtttagctcagttggtatagacaatgcataaaatatgcaag 12671765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 20383482 - 20383535
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||| ||||| ||||||||||| | ||| ||||||||||| ||||||||||||    
T  20383482 gttcatgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtc 20383535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 32430185 - 32430140
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| ||| ||||||||| |||||||||||||||||||| ||||    
T  32430185 cgtgagcttaactcagttagtatgaacaatgcataaaatatacaag 32430140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 10401458 - 10401410
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||| |||||| | |||||||||||||| |||||||||||||    
T  10401458 cgtgagcttagttcagttggtatgaacaatgcatacaatatgcaaggtc 10401410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 14079251 - 14079298
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||||||| | || |||||||||||| ||||||||||||    
T  14079251 cgtgagtttagctcagtt-gtattaacaatgcataatatatgcaaggtc 14079298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 16304156 - 16304112
Alignment:
Q  138 agtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||| | ||| ||||||||||| ||||||||||||    
T  16304156 agtttagctcagttggtatggacaatgcataatatatgcaaggtc 16304112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 19588153 - 19588201
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||||| || | ||| ||||||||||||||||||||||||    
T  19588153 cgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtc 19588201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 34033355 - 34033391
Alignment:
Q  157 gaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  34033355 gaaccatgcataaaatatgcaaggtccggagtttgaa 34033391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 37193248 - 37193296
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||||| ||| |||||| |||| ||||||||||||    
T  37193248 cgtgagcttagctcagttagtatggacaatgtataatatatgcaaggtc 37193296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 40071030 - 40070982
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||| ||||||| | ||||||||||||||| ||||||||||||    
T  40071030 cgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtc 40070982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 49021766 - 49021814
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    ||||||||||| ||||| | ||| ||||| |||||||||||||||||||    
T  49021766 gtgagtttagcgcagttggtatggacaatacataaaatatgcaaggtct 49021814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 54857677 - 54857629
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||| ||| | || |||||||||||||||||||||||||    
T  54857677 cgtgagcttagctcggttggtataaacaatgcataaaatatgcaaggtc 54857629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 37529 - 37596
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    |||| |||||| |||||| |||| | |||||||||||||||||||||||||||| || ||| ||||||    
T  37529 gttctcgtgagcttagctaagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaatcc 37596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 10819 - 10757
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||| ||| ||| ||||||    
T  10819 cgtgagtttagctcagttggtaaggacaatgcataaaatatgcaaggtttggtgttggaatcc 10757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 118818 - 118873
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||| ||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  118818 cgtgagcttagctcagttggtttgaacaatgcataaaatatgtaaggtctggagtt 118873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 242302 - 242358
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagttt 190  Q
    |||||| |||||| | || | ||||||||||||||||| || |||||||||||||||    
T  242302 cgtgagcttagcttatttggtatgaacaatgcataaaacatacaaggtctggagttt 242358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 1525 - 1575
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  1525 cacgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 14255 - 14201
Alignment:
Q  127 aggttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||| |||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  14255 aggttctcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggt 14201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 47303 - 47253
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||||    
T  47303 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtctg 47253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 26885705 - 26885659
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatg 175  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||    
T  26885705 gttctcgtgagtttagctcagttggtatgaacaatgcataaaatatg 26885659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 30694503 - 30694454
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||| ||| ||||||| | |||||||||||||||||||||||||||    
T  30694503 cacgtgagcttatctcagtttgtatgaacaatgcataaaatatgcaaggt 30694454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 24023477 - 24023429
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||||||||||   ||||||||||||||||||||||||||    
T  24023477 cgtgagcttagctcagttagttggaacaatgcataaaatatgcaaggtc 24023429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 37750066 - 37750002
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    |||| ||||||||||||||||||   ||||||||||||||| |||||||| ||| || |||||||    
T  37750066 gttctcgtgagtttagctcagttgatatgaacaatgcataatatatgcaaagtccggggtttgaa 37750002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 1644735 - 1644684
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||| ||||||||||| | |||| |||||||||||||||| |||||||||    
T  1644735 cgtgagcttagctcagttggtatgagcaatgcataaaatatgtaaggtctgg 1644684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 6447188 - 6447243
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||||||||| ||||||| | ||| ||||||||||| |||||||||||| ||||||    
T  6447188 cgtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggagtt 6447243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 8717537 - 8717490
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||||||||||| | ||| ||||||||||| |||||||||||    
T  8717537 cgtgagtttagctcagttggtatggacaatgcataatatatgcaaggt 8717490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 32555253 - 32555300
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||    
T  32555253 cgtgagtttagcttagttggtatggacaatgcataaaatatgcaaggt 32555300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 39433409 - 39433460
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||| |||||||||||   ||||||||| |||||||||||||||||||||    
T  39433409 cgtgagcttagctcagttgatatgaacaatacataaaatatgcaaggtctgg 39433460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 2554273 - 2554212
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||| |||||||||||   ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  2554273 gtgagcttagctcagttgatatggacaatacataaaatatgcaaggtctggggttcgaatcc 2554212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 14279635 - 14279586
Alignment:
Q  132 cacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||||| ||||||| | ||  |||||||||||||||||||||||    
T  14279635 cacgtgagtttaactcagttggtatagacaatgcataaaatatgcaaggt 14279586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 11052986 - 11053034
Alignment:
Q  145 ctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaa 193  Q
    ||||||||| ||| ||||||||||| |||||||||||| || |||||||    
T  11052986 ctcagttagtatggacaatgcataatatatgcaaggtccggggtttgaa 11053034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 12910867 - 12910819
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    ||||| ||||||||||| | ||| ||||||||||| |||||||||||||    
T  12910867 gtgagattagctcagttggtatggacaatgcataatatatgcaaggtct 12910819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 14975925 - 14975877
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| ||||||||||| | ||||||| ||||||||||||||| ||||    
T  14975925 cgtgagcttagctcagttggtatgaacagtgcataaaatatgcagggtc 14975877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 24023863 - 24023823
Alignment:
Q  145 ctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    ||||||| | ||| |||||||||||||||||||||||||||    
T  24023863 ctcagttggtatggacaatgcataaaatatgcaaggtctgg 24023823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 29499770 - 29499818
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||||| || | ||| ||||||||||||||||||||||||    
T  29499770 cgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtc 29499818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 37938719 - 37938659
Alignment:
Q  129 gttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtt 189  Q
    |||| ||||||  |||||||| ||| ||||| ||||||||| |||||||||||| ||||||    
T  37938719 gttctcgtgagcgtagctcagctagtatgaataatgcataatatatgcaaggtccggagtt 37938659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 40919417 - 40919373
Alignment:
Q  138 agtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||||||| | | ||||||||||||| ||||||||||||    
T  40919417 agtttagctcagttggtaggaacaatgcataatatatgcaaggtc 40919373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 12691 - 12643
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||||||||    
T  12691 cgtgagtttaactcagttagtacgaataatgcataaaatatgcaaggtc 12643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 5416 - 5463
Alignment:
Q  138 agtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||||||| ||| | ||| |||||||||||||||||||||||||||    
T  5416 agtttagctcggttggtatggacaatgcataaaatatgcaaggtctgg 5463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 28175 - 28124
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctgg 185  Q
    |||||||||||||||||| | ||| |||||||||||  ||||||||||||||    
T  28175 cgtgagtttagctcagttggtatggacaatgcataacgtatgcaaggtctgg 28124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 204597 - 204636
Alignment:
Q  142 tagctcagttagcatgaacaatgcataaaatatgcaaggt 181  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  204597 tagctcagttggcatgaacaatgcataaaatatgtaaggt 204636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 17725 - 17779
Alignment:
Q  128 ggttcacgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    ||||| |||||||||||||||||| | ||| ||||||||||| | ||||||||||    
T  17725 ggttctcgtgagtttagctcagttggtatggacaatgcataatacatgcaaggtc 17779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 5182 - 5231
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctg 184  Q
    |||||||||||||| || | ||| ||||||||||| ||||||||||||||    
T  5182 gtgagtttagctcaattggtatggacaatgcataatatatgcaaggtctg 5231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 44825 - 44776
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtct 183  Q
    |||||||||||||||||||  ||| ||||| | |||||||||||||||||    
T  44825 cgtgagtttagctcagttaatatgtacaattcttaaaatatgcaaggtct 44776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 17504 - 17565
Alignment:
Q  135 gtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtctggagtttgaatcc 196  Q
    ||||||||||||||| |  |||| ||||||||||| ||||||||||| ||| ||| ||||||    
T  17504 gtgagtttagctcagctgacatggacaatgcataatatatgcaaggtttggggttcgaatcc 17565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 185262 - 185307
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaag 179  Q
    |||||| ||||||||||| | ||| |||||||||||||||||||||    
T  185262 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 185307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 223739 - 223691
Alignment:
Q  134 cgtgagtttagctcagttagcatgaacaatgcataaaatatgcaaggtc 182  Q
    |||||| |||||||||||||  |||||||||||||| ||||||| ||||    
T  223739 cgtgagcttagctcagttagtttgaacaatgcataatatatgcatggtc 223691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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