View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19756_low_19 (Length: 331)

Name: NF19756_low_19
Description: NF19756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19756_low_19
NF19756_low_19
[»] chr7 (36 HSPs)
chr7 (14-331)||(9136603-9136920)
chr7 (208-331)||(37100967-37101090)
chr7 (214-331)||(38850708-38850825)
chr7 (206-331)||(38069049-38069174)
chr7 (208-331)||(9173277-9173400)
chr7 (208-331)||(16807087-16807210)
chr7 (208-331)||(30462162-30462285)
chr7 (208-331)||(33376775-33376898)
chr7 (207-330)||(28016115-28016237)
chr7 (208-331)||(31496586-31496709)
chr7 (208-331)||(35693771-35693894)
chr7 (201-331)||(40665709-40665839)
chr7 (211-331)||(47713373-47713493)
chr7 (208-331)||(25273958-25274081)
chr7 (201-278)||(32972321-32972398)
chr7 (207-331)||(38441812-38441936)
chr7 (208-331)||(40231928-40232051)
chr7 (208-331)||(41007897-41008020)
chr7 (208-331)||(46242419-46242544)
chr7 (206-331)||(3124087-3124212)
chr7 (227-331)||(4088777-4088881)
chr7 (207-322)||(4620065-4620180)
chr7 (204-278)||(36819612-36819686)
chr7 (206-331)||(32222548-32222673)
chr7 (208-274)||(18756599-18756665)
chr7 (208-331)||(38353539-38353662)
chr7 (250-331)||(29247669-29247750)
chr7 (288-331)||(26651150-26651193)
chr7 (288-331)||(35265762-35265805)
chr7 (288-331)||(36819956-36819999)
chr7 (251-327)||(48448561-48448637)
chr7 (208-309)||(42493517-42493618)
chr7 (296-331)||(5842205-5842240)
chr7 (288-331)||(41844849-41844892)
chr7 (208-274)||(39173835-39173901)
chr7 (286-331)||(27621236-27621281)
[»] chr6 (28 HSPs)
chr6 (201-331)||(24798491-24798621)
chr6 (208-331)||(16661547-16661670)
chr6 (208-331)||(2397770-2397893)
chr6 (206-331)||(4890071-4890196)
chr6 (208-331)||(2667270-2667393)
chr6 (208-331)||(30699261-30699384)
chr6 (208-331)||(32541422-32541545)
chr6 (208-331)||(2656615-2656738)
chr6 (205-331)||(995560-995686)
chr6 (206-331)||(9022838-9022963)
chr6 (205-273)||(24949532-24949600)
chr6 (238-331)||(24825195-24825288)
chr6 (208-331)||(6142452-6142575)
chr6 (208-331)||(31708893-31709016)
chr6 (208-309)||(17496285-17496386)
chr6 (238-331)||(29514971-29515064)
chr6 (213-305)||(13358514-13358606)
chr6 (208-321)||(31948597-31948709)
chr6 (208-331)||(2141568-2141691)
chr6 (208-331)||(29795451-29795573)
chr6 (238-331)||(6188601-6188694)
chr6 (208-327)||(10109360-10109478)
chr6 (200-331)||(2912888-2913020)
chr6 (215-331)||(10105818-10105934)
chr6 (208-331)||(28483037-28483160)
chr6 (116-162)||(11313986-11314032)
chr6 (207-309)||(35117279-35117381)
chr6 (288-331)||(16120819-16120862)
[»] chr3 (44 HSPs)
chr3 (203-331)||(29793314-29793442)
chr3 (205-331)||(9484593-9484719)
chr3 (207-331)||(42098563-42098687)
chr3 (204-331)||(2643205-2643332)
chr3 (208-331)||(49076362-49076485)
chr3 (205-331)||(29809342-29809468)
chr3 (202-331)||(1778355-1778484)
chr3 (208-331)||(12948040-12948163)
chr3 (208-331)||(16434793-16434916)
chr3 (208-331)||(34263640-34263763)
chr3 (208-329)||(18013408-18013529)
chr3 (206-331)||(34555149-34555274)
chr3 (207-331)||(901024-901148)
chr3 (211-331)||(1334231-1334351)
chr3 (208-331)||(28958935-28959058)
chr3 (208-331)||(29455644-29455767)
chr3 (208-331)||(48927738-48927861)
chr3 (201-331)||(52094030-52094160)
chr3 (208-328)||(50673677-50673797)
chr3 (207-331)||(53274931-53275055)
chr3 (208-331)||(32961246-32961369)
chr3 (213-331)||(34669613-34669731)
chr3 (209-331)||(53055561-53055683)
chr3 (208-331)||(4229124-4229247)
chr3 (208-331)||(4945787-4945910)
chr3 (219-331)||(36594354-36594467)
chr3 (208-331)||(4464881-4465004)
chr3 (208-331)||(29720395-29720518)
chr3 (208-331)||(46866343-46866466)
chr3 (208-331)||(36179072-36179195)
chr3 (221-331)||(47340020-47340130)
chr3 (208-309)||(38833923-38834024)
chr3 (207-271)||(44781979-44782043)
chr3 (201-331)||(49818750-49818880)
chr3 (288-331)||(14750997-14751040)
chr3 (210-269)||(14751040-14751099)
chr3 (208-274)||(47069406-47069472)
chr3 (211-262)||(935034-935085)
chr3 (296-331)||(3817811-3817846)
chr3 (288-331)||(12250383-12250426)
chr3 (297-331)||(29444981-29445015)
chr3 (286-331)||(39099041-39099086)
chr3 (122-162)||(9011845-9011885)
chr3 (295-331)||(31787167-31787203)
[»] chr1 (48 HSPs)
chr1 (205-329)||(1821575-1821699)
chr1 (206-331)||(45299316-45299441)
chr1 (208-331)||(43453110-43453233)
chr1 (210-331)||(44452197-44452318)
chr1 (208-331)||(10100458-10100581)
chr1 (200-331)||(52749273-52749404)
chr1 (205-331)||(8048693-8048819)
chr1 (208-331)||(5606336-5606459)
chr1 (208-331)||(28490160-28490283)
chr1 (208-331)||(31932123-31932246)
chr1 (199-331)||(10124099-10124232)
chr1 (208-331)||(6017394-6017517)
chr1 (208-331)||(41414203-41414326)
chr1 (208-331)||(41855666-41855789)
chr1 (208-331)||(44240519-44240642)
chr1 (208-331)||(50014506-50014629)
chr1 (217-331)||(31651846-31651960)
chr1 (208-331)||(7075275-7075398)
chr1 (221-331)||(49903630-49903740)
chr1 (214-331)||(26543874-26543991)
chr1 (208-331)||(2126652-2126778)
chr1 (208-278)||(29253479-29253549)
chr1 (214-331)||(4489067-4489184)
chr1 (208-309)||(8251116-8251217)
chr1 (218-331)||(40058912-40059027)
chr1 (223-331)||(48389081-48389189)
chr1 (198-331)||(52688520-52688654)
chr1 (208-331)||(5945765-5945888)
chr1 (221-331)||(44741356-44741466)
chr1 (214-331)||(40883417-40883534)
chr1 (215-331)||(23393239-23393355)
chr1 (211-320)||(23337813-23337919)
chr1 (208-331)||(33526107-33526230)
chr1 (208-331)||(48312029-48312151)
chr1 (208-331)||(9334377-9334504)
chr1 (208-331)||(9358150-9358277)
chr1 (225-331)||(38786891-38786997)
chr1 (288-331)||(2138974-2139017)
chr1 (223-331)||(36035701-36035809)
chr1 (225-331)||(10648143-10648252)
chr1 (288-331)||(5117379-5117422)
chr1 (208-327)||(12685846-12685966)
chr1 (288-331)||(26476954-26476997)
chr1 (288-331)||(44963617-44963660)
chr1 (288-331)||(50295881-50295924)
chr1 (208-278)||(3138605-3138674)
chr1 (116-162)||(5489605-5489651)
chr1 (202-259)||(38737372-38737429)
[»] chr2 (37 HSPs)
chr2 (207-329)||(16126024-16126146)
chr2 (209-329)||(16127722-16127842)
chr2 (208-331)||(8896271-8896394)
chr2 (207-329)||(16333479-16333601)
chr2 (210-331)||(7724551-7724672)
chr2 (208-331)||(45036363-45036486)
chr2 (207-331)||(12208988-12209112)
chr2 (208-331)||(8373434-8373557)
chr2 (208-331)||(37316876-37316999)
chr2 (208-331)||(41575562-41575685)
chr2 (205-331)||(18504469-18504595)
chr2 (206-331)||(10333518-10333643)
chr2 (208-331)||(41436832-41436955)
chr2 (205-331)||(38963792-38963918)
chr2 (208-331)||(2831707-2831830)
chr2 (208-331)||(6730043-6730166)
chr2 (208-331)||(40471736-40471859)
chr2 (210-331)||(31603356-31603477)
chr2 (223-331)||(43328741-43328849)
chr2 (207-331)||(5096247-5096371)
chr2 (215-331)||(15177376-15177492)
chr2 (203-331)||(16646241-16646369)
chr2 (208-331)||(6075125-6075248)
chr2 (208-331)||(22718483-22718606)
chr2 (207-274)||(20682653-20682720)
chr2 (207-258)||(25627037-25627088)
chr2 (208-331)||(4137410-4137532)
chr2 (207-331)||(26436627-26436747)
chr2 (289-331)||(41319864-41319906)
chr2 (250-331)||(1749112-1749193)
chr2 (288-331)||(7601337-7601380)
chr2 (288-331)||(9273433-9273476)
chr2 (207-323)||(25766443-25766559)
chr2 (288-331)||(37987876-37987919)
chr2 (286-331)||(15771022-15771067)
chr2 (286-323)||(25762272-25762309)
chr2 (227-320)||(43409434-43409527)
[»] scaffold0500 (1 HSPs)
scaffold0500 (208-331)||(616-739)
[»] scaffold0221 (1 HSPs)
scaffold0221 (208-331)||(5376-5499)
[»] chr5 (43 HSPs)
chr5 (208-331)||(1098175-1098298)
chr5 (207-331)||(20040356-20040480)
chr5 (207-331)||(30721626-30721750)
chr5 (208-327)||(30788205-30788324)
chr5 (208-331)||(31191118-31191241)
chr5 (208-328)||(1781089-1781209)
chr5 (208-331)||(39925203-39925327)
chr5 (208-331)||(19344640-19344763)
chr5 (208-331)||(40316818-40316941)
chr5 (208-331)||(41410600-41410723)
chr5 (207-331)||(13548212-13548336)
chr5 (211-331)||(14057711-14057831)
chr5 (208-331)||(20022860-20022983)
chr5 (208-331)||(33402532-33402655)
chr5 (214-331)||(30211682-30211799)
chr5 (203-331)||(9936829-9936957)
chr5 (207-331)||(10465236-10465360)
chr5 (211-331)||(34169832-34169952)
chr5 (208-331)||(1831351-1831474)
chr5 (208-331)||(14633007-14633130)
chr5 (208-327)||(20502993-20503112)
chr5 (208-331)||(27675540-27675663)
chr5 (208-331)||(41263070-41263193)
chr5 (206-331)||(40079979-40080104)
chr5 (211-331)||(14607498-14607618)
chr5 (208-327)||(32473967-32474086)
chr5 (215-331)||(34347474-34347594)
chr5 (215-331)||(2799638-2799755)
chr5 (215-308)||(8627142-8627235)
chr5 (219-331)||(41042778-41042890)
chr5 (206-331)||(2551568-2551693)
chr5 (208-331)||(39104220-39104344)
chr5 (219-331)||(967203-967317)
chr5 (225-331)||(2805814-2805921)
chr5 (116-197)||(19516608-19516690)
chr5 (223-328)||(28142943-28143048)
chr5 (208-275)||(32110669-32110736)
chr5 (244-331)||(6734817-6734904)
chr5 (286-327)||(27674295-27674336)
chr5 (250-331)||(14639656-14639737)
chr5 (208-278)||(14139935-14140005)
chr5 (294-331)||(1918771-1918808)
chr5 (294-331)||(40365829-40365866)
[»] chr4 (43 HSPs)
chr4 (205-331)||(46608210-46608336)
chr4 (214-331)||(1613158-1613275)
chr4 (206-331)||(31152659-31152784)
chr4 (203-331)||(10384843-10384971)
chr4 (208-331)||(37667714-37667837)
chr4 (208-331)||(55631815-55631938)
chr4 (204-331)||(31657296-31657423)
chr4 (204-331)||(33394073-33394200)
chr4 (208-331)||(43447165-43447288)
chr4 (213-331)||(47834084-47834202)
chr4 (206-331)||(42185272-42185397)
chr4 (208-331)||(40411548-40411672)
chr4 (208-331)||(28988334-28988457)
chr4 (213-331)||(39170963-39171081)
chr4 (201-331)||(53987720-53987850)
chr4 (206-331)||(6520433-6520558)
chr4 (208-331)||(3708253-3708376)
chr4 (208-331)||(28899011-28899134)
chr4 (208-331)||(43047387-43047510)
chr4 (207-331)||(8525356-8525480)
chr4 (208-331)||(24334318-24334444)
chr4 (225-329)||(37164033-37164137)
chr4 (210-273)||(48336426-48336489)
chr4 (224-331)||(1981321-1981429)
chr4 (203-331)||(39332770-39332898)
chr4 (199-274)||(39376869-39376944)
chr4 (208-331)||(29821050-29821173)
chr4 (207-330)||(37588472-37588595)
chr4 (201-331)||(23605842-23605972)
chr4 (207-309)||(48380472-48380574)
chr4 (251-331)||(28914411-28914491)
chr4 (208-331)||(18881297-18881420)
chr4 (214-276)||(52818680-52818742)
chr4 (288-331)||(39260432-39260475)
chr4 (208-278)||(1377503-1377573)
chr4 (208-331)||(4271954-4272068)
chr4 (288-331)||(13848954-13848997)
chr4 (288-331)||(24505591-24505634)
chr4 (296-331)||(50685008-50685043)
chr4 (297-331)||(48652561-48652595)
chr4 (294-331)||(28909780-28909817)
chr4 (200-241)||(41555454-41555495)
chr4 (286-331)||(54802998-54803043)
[»] chr8 (48 HSPs)
chr8 (207-331)||(30464431-30464555)
chr8 (208-331)||(20671256-20671379)
chr8 (207-331)||(3466282-3466406)
chr8 (208-331)||(4960151-4960274)
chr8 (208-331)||(23437751-23437874)
chr8 (208-331)||(44887653-44887776)
chr8 (206-331)||(8496824-8496949)
chr8 (207-331)||(25691535-25691659)
chr8 (208-331)||(37094132-37094255)
chr8 (208-330)||(44947018-44947139)
chr8 (206-331)||(14378624-14378749)
chr8 (207-331)||(761549-761673)
chr8 (207-331)||(43184717-43184841)
chr8 (208-331)||(30653360-30653483)
chr8 (208-331)||(44361921-44362044)
chr8 (206-331)||(25009142-25009267)
chr8 (207-327)||(38842161-38842282)
chr8 (194-278)||(44717282-44717366)
chr8 (215-331)||(29917866-29917981)
chr8 (208-331)||(4327057-4327180)
chr8 (208-331)||(5777492-5777615)
chr8 (205-331)||(8058962-8059086)
chr8 (207-331)||(11756775-11756901)
chr8 (208-331)||(28583241-28583364)
chr8 (216-331)||(44039833-44039948)
chr8 (205-331)||(27301859-27301985)
chr8 (208-309)||(40645609-40645710)
chr8 (203-331)||(23547063-23547191)
chr8 (215-331)||(43049207-43049323)
chr8 (237-331)||(18419027-18419121)
chr8 (238-331)||(21132866-21132959)
chr8 (207-331)||(17523804-17523928)
chr8 (205-267)||(8123652-8123714)
chr8 (208-331)||(29616264-29616387)
chr8 (205-327)||(2026569-2026691)
chr8 (288-331)||(44871411-44871454)
chr8 (289-331)||(8123719-8123761)
chr8 (208-278)||(14584198-14584268)
chr8 (294-331)||(21133009-21133046)
chr8 (225-331)||(25118803-25118909)
chr8 (250-331)||(29708603-29708684)
chr8 (288-331)||(7431257-7431300)
chr8 (288-331)||(14511920-14511963)
chr8 (288-331)||(15870255-15870298)
chr8 (288-331)||(32909135-32909178)
chr8 (288-326)||(13888573-13888611)
chr8 (286-331)||(35584112-35584157)
chr8 (286-331)||(42786036-42786081)
[»] scaffold0001 (1 HSPs)
scaffold0001 (208-331)||(183966-184089)
[»] scaffold0283 (1 HSPs)
scaffold0283 (208-330)||(2996-3117)
[»] scaffold0204 (1 HSPs)
scaffold0204 (210-273)||(23948-24011)
[»] scaffold0281 (1 HSPs)
scaffold0281 (208-331)||(13104-13227)
[»] scaffold1248 (1 HSPs)
scaffold1248 (208-327)||(1401-1520)
[»] scaffold0952 (1 HSPs)
scaffold0952 (208-327)||(793-912)
[»] scaffold0289 (1 HSPs)
scaffold0289 (294-331)||(9210-9247)
[»] scaffold0195 (1 HSPs)
scaffold0195 (288-331)||(186-229)
[»] scaffold0172 (1 HSPs)
scaffold0172 (288-331)||(19676-19719)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 14 - 331
Target Start/End: Complemental strand, 9136920 - 9136603
Alignment:
Q  14 caaagggaacactgaacatgtgacaattgagaaaccacataaatttcgaaattactcaattatatttcacttagaaccattttaaaaagtaacatgtgga 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9136920 caaagggaacactgaacatgtgacaattgagaaaccacagaaatttcgaaattactcaattatatttcacttagaaccattttaaaaagtaacatgtgga 9136821  T
Q  114 tgttttaataaaaaataagtgggagtagacttgctaacgtactcattcannnnnnngtgtgggagtaagttaacaccccctaaattttatttattactcc 213  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  9136820 tgttttaatcaaaaacaagtgggagtagacttgctaacgtactcattcatttttttgtgtgggagtaagttaacaccccctaaattttatttattactcc 9136721  T
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||       ||||||||||||||||||||||||||||    
T  9136720 ctccatcccgcaatagatgatccatttgataatgtgtaattttgacctagtttattttgaccatatttttctattaatagacaaagataaataatagcat 9136621  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||||||||||||||    
T  9136620 ataagatgtcgttagatt 9136603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 37101090 - 37100967
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||       ||||||| ||||||| ||||||    
T  37101090 tactccctccgtcccgcaatagatgacctatttgaaaatgtgtaattttgacctaacttactttgaccatatttttctattaatatacaaagaaaaataa 37100991  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  37100990 tatcatataagatgtcgttagatt 37100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 38850708 - 38850825
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||       | ||||| |||||||||||||||| |||    
T  38850708 ctccgttccacaatagatgacccatttgaaaatgtgtaattttgacctaacttactttgaccatatttttccactaatatacaaagataaataatatcat 38850807  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||||||||||||||    
T  38850808 ataagatgtcgttagatt 38850825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 38069049 - 38069174
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||||||| |||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||    
T  38069049 attactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 38069148  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  38069149 aatatcatataagatgtcgttagatt 38069174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 9173400 - 9173277
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||| ||| ||||||||||| |||| | || |||||||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  9173400 tactccctccgttccggaatagatgaccaatttaaaaacgtgtaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 9173301  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  9173300 tatcatataagatgtcgttagatt 9173277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 16807210 - 16807087
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  16807210 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 16807111  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  16807110 tatcatataagatgtcgttagatt 16807087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 30462285 - 30462162
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| |  ||||| |||||| ||||||||| || |||||||||||||||       | ||||| ||||||||||||||    
T  30462285 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactttgaccatatttttttactaatatacaaagataaataa 30462186  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  30462185 tatcatataagatgtcgttagatt 30462162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 33376775 - 33376898
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| |||||||||||||||| |||||||| | | | ||||||||||||| |||||||||||| ||       ||||||| ||||||| ||||||    
T  33376775 tactccctctgtcccgcaatagatgatccatttgaaattttttaattttgacctaacttactttgaccgtatttttctattaatatacaaagaaaaataa 33376874  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  33376875 tatcatataagatgtcgttagatt 33376898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 28016115 - 28016237
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||||| | ||||| |||||||||||||| |||||| |||||||| ||| |||||||||||||||       | ||||| |||||||||||||    
T  28016115 ttactccctccgttctgcaat-gatgacccatttgaaaatgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataaata 28016213  T
Q  307 atagcatataagatgtcgttagat 330  Q
    ||| |||||||||||| |||||||    
T  28016214 atatcatataagatgttgttagat 28016237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 31496709 - 31496586
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| || ||||||| |  ||||||| |||||  |||||||||||| |||||||||||| ||       ||||||| ||||||||||||||    
T  31496709 tactccctccgtctcgtaatagataattcatttgaaaatgtacaattttgacctaacttactttgaccgtatttttctattaatatacaaagataaataa 31496610  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  31496609 tatcatataagatgtcgttagatt 31496586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 35693894 - 35693771
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| ||||||| ||||||  ||||| |||||| |||||||||||| ||||||| |||||||       | ||||| ||||| ||||||||    
T  35693894 tactccctccgtcgcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttcgaccatatttttctactaatatacaaaaataaataa 35693795  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  35693794 tatcatataagatgtcgttagatt 35693771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 331
Target Start/End: Complemental strand, 40665839 - 40665709
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaaga 300  Q
    ||||||||||||| ||||| |||||||||||||   |||||| ||| |||||||||||| ||||||||||||||||||         ||||| ||| |||    
T  40665839 tatttattactccttccgttccgcaatagatgatttatttgaaaatttgtaattttgacttagcttactttgaccatatttttcagctaatatacataga 40665740  T
Q  301 taaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| |||||||||| ||||||||||    
T  40665739 taaataatatcatataagatatcgttagatt 40665709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 211 - 331
Target Start/End: Complemental strand, 47713493 - 47713373
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatag 310  Q
    |||||| |||||  |||||||||||||||||| |||||| |||||||||||| |||||||||||| ||         ||||| ||||||||||||||||     
T  47713493 tccctctgtcccataatagatgacccatttgaaaatgtgcaattttgacctaacttactttgaccgtatttttttgctaatatacaaagataaataatat 47713394  T
Q  311 catataagatgtcgttagatt 331  Q
    |||||||||| ||||||||||    
T  47713393 catataagatatcgttagatt 47713373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 25274081 - 25273958
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||||||| |||||| |||| |  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  25274081 tactccatccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccataattttctactaatatacaaagataaataa 25273982  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    ||  ||||||||||||||||||||    
T  25273981 tattatataagatgtcgttagatt 25273958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 32972398 - 32972321
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    |||| |||||||||||| ||||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||    
T  32972398 tattaattactccctccctcccgcaatagatgacctatttgaaaatttgcaagtttgacctagcttactttgaccata 32972321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 38441812 - 38441936
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||| ||||||  | ||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||       | ||||| |||||||| ||||    
T  38441812 ttactctctccgttacacaatagatgactcatttgaaaatgtgtaatttttacctaacttactttgaccatatttttctactaatatacaaagatgaata 38441911  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| ||||| |||| ||||||||||    
T  38441912 atatcatatgagatatcgttagatt 38441936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 40231928 - 40232051
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||| || |||  ||||| |||||| ||||||||||||  ||| ||||||||||       | ||||| | ||||||||||||    
T  40231928 tactccctccgtcccgtaataaataacctgtttgaaaatgtgcaattttgacctaatttattttgaccatatttttctactaatatataaagataaataa 40232027  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  40232028 tatcatataagatgtcgttagatt 40232051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 41008020 - 41007897
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||| || | ||||||||||| ||||| | ||| ||||||||||||||| |||||||||||||||       | ||||| |||   ||||||||    
T  41008020 tactccctccatctcacaatagatgactcatttaaaaatatgtaattttgacctaacttactttgaccatatttttctactaatatacagcaataaataa 41007921  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  41007920 tatcatataagatgtcgttagatt 41007897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 46242544 - 46242419
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata--nnnnnnnattaatagacaaagataaat 305  Q
    |||||||| ||||| ||||||  |||| ||||||| |||||| |||||||||||| |||||||||||||||         | ||||| ||||||||||||    
T  46242544 tactcccttcgtcctgcaatatttgactcatttgaaaatgtgcaattttgacctaacttactttgaccatatttttttttactaatatacaaagataaat 46242445  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| ||||||| |||||||||||||    
T  46242444 aatatcatataaaatgtcgttagatt 46242419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 3124212 - 3124087
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||| |||||||| |||||||||||| ||||||| ||||||||||||||| |||  | ||||||||  ||       | ||||| ||||| ||||||    
T  3124212 attactctctccgtcctgcaatagatgactcatttgaaaatgtgtaattttgatctaattgactttgactgtatttttctactaatatacaaaaataaat 3124113  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| ||||||| |||||||||||||    
T  3124112 aatatcatataaaatgtcgttagatt 3124087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 331
Target Start/End: Complemental strand, 4088881 - 4088777
Alignment:
Q  227 tagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgtt 326  Q
    |||||||||||||||| |||||| ||| ||||| ||  ||||||||||  ||       ||||||| |||||||||||||||| ||||||||||||||||    
T  4088881 tagatgacccatttgaaaatgtgaaatattgacataatttactttgactgtatttttctattaatatacaaagataaataatatcatataagatgtcgtt 4088782  T
Q  327 agatt 331  Q
    |||||    
T  4088781 agatt 4088777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 4620065 - 4620180
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccattt-gataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||| |||||||||||| | |  ||||| || ||||||||||||||||||| |||||||||||||||       ||||||| ||||||||||||    
T  4620065 ttactccctctgtcccgcaataggtaattcattttgaaaatgtgtaattttgacctaacttactttgaccata-ttttttattaatatacaaagataaat 4620163  T
Q  306 aatagcatataagatgt 322  Q
    ||||  |||||||||||    
T  4620164 aatattatataagatgt 4620180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 36819612 - 36819686
Alignment:
Q  204 ttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    |||||||||||||||| |||||||| ||||||  ||||| |||||| |||||||||||| |||||||||| ||||    
T  36819612 ttattactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgatcata 36819686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 32222548 - 32222673
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||||||| ||| |||||||||||||| | | |||||| |||||||| |||  ||||||| | | ||       ||||||| ||||||||||||    
T  32222548 attactccctccgttccgtaatagatgacccatctcaaaatgtgcaattttgatctaatttactttaatcgtatttttctattaatatacaaagataaat 32222647  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| ||||||||||||  |||||||    
T  32222648 aatatcatataagatgtttttagatt 32222673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 18756599 - 18756665
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgac 274  Q
    |||||| ||||| ||| |||||||||||||||||| ||| || |||||||||||| |||||||||||    
T  18756599 tactccatccgttccgtaatagatgacccatttgaaaatatgcaattttgacctatcttactttgac 18756665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 38353662 - 38353539
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||||||| ||||||||||| |||||| | ||| | ||||||||| |||  ||| |||||  |||       | ||||| ||||||||||||||    
T  38353662 tactccatccgtcctgcaatagatgatccatttaaaaatttataattttgatctaatttagtttgattatatttttctactaatatacaaagataaataa 38353563  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  38353562 tatcatataagatgtcgttagatt 38353539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 29247669 - 29247750
Alignment:
Q  250 taattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| || ||||||||| ||       | ||||| |||||||||||||||| |||||||||||||||||||||    
T  29247669 taattttgacctaactgactttgaccgtattttttaactaatatacaaagataaataatatcatataagatgtcgttagatt 29247750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 26651193 - 26651150
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  26651193 taatatacaaagataaataatatcatataagatgtcgttagatt 26651150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 35265805 - 35265762
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  35265805 taatatacaaagataaataatatcatataagatgtcgttagatt 35265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 36819956 - 36819999
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  36819956 taatatacaaagataaataataccatataagatgtcgttagatt 36819999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 48448561 - 48448637
Alignment:
Q  251 aattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgtta 327  Q
    |||||||||||| |||||||| ||||||       | ||||| |||||||||||||||| |||||||||||||||||    
T  48448561 aattttgacctaacttactttaaccatatttttccactaatatacaaagataaataatatcatataagatgtcgtta 48448637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 42493517 - 42493618
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||| |||||||||||| |||||| ||||||     |||||||| | |||||||||||||       | ||||| ||||||||||||||    
T  42493517 tactccctccgtcccacaatagatgacctatttgacaatgtgcgcgattgacctaacatactttgaccatatttttctactaatatacaaagataaataa 42493616  T
Q  308 ta 309  Q
    ||    
T  42493617 ta 42493618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 5842205 - 5842240
Alignment:
Q  296 aaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||| |||||||||||||||||||||    
T  5842205 aaagataaataatatcatataagatgtcgttagatt 5842240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 41844849 - 41844892
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  41844849 taatatacaaagataaataacatcatataagatgtcgttagatt 41844892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 39173835 - 39173901
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgac 274  Q
    |||||| ||| | |||||||||||||||||||| | ||| ||||||||||| |||  ||||||||||    
T  39173835 tactccatccatgccgcaatagatgacccatttaaaaatatgtaattttgatctaatttactttgac 39173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 27621281 - 27621236
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||| | |||||||||||| | |||||||||||||||||||||    
T  27621281 attaatatataaagataaataaaatcatataagatgtcgttagatt 27621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 201 - 331
Target Start/End: Complemental strand, 24798621 - 24798491
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaaga 300  Q
    |||||||||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||    
T  24798621 tatttattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaaga 24798522  T
Q  301 taaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| |||||||||||||||||||||    
T  24798521 taaataatatcatataagatgtcgttagatt 24798491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 16661670 - 16661547
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| ||       | ||||| | ||||||||||||    
T  16661670 tactccctcagtcccgcaatagatgatccatttgaaaatgtgtaattttgacctaacttactttgaccgtatttttctactaatatataaagataaataa 16661571  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  16661570 tatcatataagatgtcgttagatt 16661547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 2397770 - 2397893
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||  ||||||||||||||       | ||||| ||||||||||||||    
T  2397770 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaataa 2397869  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  2397870 tatcatataagatgtcgttagatt 2397893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 4890196 - 4890071
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||||||||  ||||||||||| |||||| | |||||| ||||||||||||  ||||||||||||||       | ||||| ||||||||||||    
T  4890196 attactccctccgtcatgcaatagatgatccatttaaaaatgtgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 4890097  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  4890096 aatatcatataagatgtcgttagatt 4890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 2667393 - 2667270
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| |  ||||| |||||| |||||||||||| ||||||||||| |||       | ||||| ||||||||||||||    
T  2667393 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgactatatttttctactaataaacaaagataaataa 2667294  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  2667293 tatcatataagatgtcgttagatt 2667270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 30699261 - 30699384
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||| |||||||| |||| |  ||| | ||||||||||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  30699261 tactccctccgttccgcaataaatgatctgtttaaaaatgtgtaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 30699360  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  30699361 tatcatataagatgtcgttagatt 30699384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 32541545 - 32541422
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| ||| || ||||||||||||  ||||||||||||||       | ||||| ||||||||||||||    
T  32541545 tactccctccgtcccgcaataaatgacctgtttgaaaatatgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaataa 32541446  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  32541445 tatcatataagatgtcgttagatt 32541422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 2656738 - 2656615
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| |||||||||||||| |||| |  ||||| |||||| |||||||||||| ||||||||||| |||       | ||||| ||||||||||||||    
T  2656738 tactccatccgtcccgcaataaatgagctgtttgaaaatgtgcaattttgacctaacttactttgactatatttttctactaatatacaaagataaataa 2656639  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  2656638 tatcatataagatgtcgttagatt 2656615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 995560 - 995686
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||||||||||| |||||| |||||   ||||| ||||||||||||||||| |  |||||||||| |||       | ||||| |||||||||||    
T  995560 tattactccctccgtcctgcaataaatgacatgtttgaaaatgtgtaattttgaccaaatttactttgactatatttttctactaatatacaaagataaa 995659  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  995660 taatatcatataagatgtcgttagatt 995686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 9022838 - 9022963
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||||||||| |||||| ||||||  ||||| ||| || |||||||||||| | |||||||||||||       | ||||| ||||| ||||||    
T  9022838 attactccctccgtcctgcaataaatgacctgtttgaaaatatgcaattttgacctaacatactttgaccatatttttctactaatatacaaaaataaat 9022937  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  9022938 aatatcatataagatgtcgttagatt 9022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 24949532 - 24949600
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttga 273  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||||    
T  24949532 tattactccctccgtcccgcaatagatgacccatttgaaaatgtgcaattttgatctaacttactttga 24949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 24825195 - 24825288
Alignment:
Q  238 tttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||||| |||||||||||||||||||||    
T  24825195 tttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgttagatt 24825288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 6142575 - 6142452
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||||||||  ||||  |||||  ||||| |||||| |||||||||||| |||||||||| ||||       | ||||| ||||||||||||||    
T  6142575 tactccatccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 6142476  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  6142475 tatcatataagatgtcgttagatt 6142452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 31708893 - 31709016
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| ||||||||||| | |||| | |||||| ||||||||| ||  ||||||||||| ||       | ||||| ||||||||||||||    
T  31708893 tactccctccgtcctgcaatagatgatctatttaaaaatgtgcaattttgacttaatttactttgaccgtatttttctactaatatacaaagataaataa 31708992  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| ||||||||||    
T  31708993 tatcatataagatatcgttagatt 31709016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 17496386 - 17496285
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| |  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  17496386 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 17496287  T
Q  308 ta 309  Q
    ||    
T  17496286 ta 17496285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 29515064 - 29514971
Alignment:
Q  238 tttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||| |||||||||||| |||||||||| ||||       | ||||| |||||||||||||||| |||||||||||||||||||||    
T  29515064 tttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatcatataagatgtcgttagatt 29514971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 13358514 - 13358606
Alignment:
Q  213 cctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||| || |||||||||||  |||||| ||||||||||||||||||| |||||||||||||||       ||||||| ||||||||||||    
T  13358514 cctccgttccacaatagatgacttatttgaaaatgtgtaattttgacctaacttactttgaccatattttgttattaatatacaaagataaat 13358606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 321
Target Start/End: Complemental strand, 31948709 - 31948597
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||| |||| || |||| ||||||||||       | |||||  |||||||||||||    
T  31948709 tactccctccgtctcgcaatagatgatccatttgaaaatgtgtaattatgacttaacttattttgaccata-ttttttactaatatgcaaagataaataa 31948611  T
Q  308 tagcatataagatg 321  Q
    || |||||||||||    
T  31948610 tatcatataagatg 31948597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 2141568 - 2141691
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||||||||  ||||  |||||  ||||| |||||  |||||||||||| |||||||||| ||||       | ||||| ||||||||||||||    
T  2141568 tactccgtccgtcccttaataagtgacctgtttgaaaatgtacaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 2141667  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  2141668 tatcatataagatgtcgttagatt 2141691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 29795451 - 29795573
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| |  ||||| |||||| |||||||| ||| |||||||| ||||||       | |||||   ||||||||||||    
T  29795451 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatttttctactaata-ttaaagataaataa 29795549  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  29795550 tatcatataagatgtcgttagatt 29795573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 6188694 - 6188601
Alignment:
Q  238 tttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||| |||||||||||| |||||||||| ||||       | ||||| | |||||||||||||| |||||||||||||||||||||    
T  6188694 tttgaaaatgtgcaattttgacctaacttactttgagcatatttttttactaatatataaagataaataatatcatataagatgtcgttagatt 6188601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 10109478 - 10109360
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| ||||||||| ||||||||||| |||||| | |||||| |||||||||||| |||||||||||  ||       | ||||| ||||| ||||||||    
T  10109478 tacttcctccgtcc-gcaatagatgatccatttaaaaatgtgcaattttgacctaacttactttgactttatttttctactaatatacaaaaataaataa 10109380  T
Q  308 tagcatataagatgtcgtta 327  Q
    ||  ||||||||||||||||    
T  10109379 tattatataagatgtcgtta 10109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 331
Target Start/End: Original strand, 2912888 - 2913020
Alignment:
Q  200 ttatttattactccctccgtcccgcaatagatgacccattt-gataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaa 298  Q
    ||||||| |||||||||||||||  ||||  |||||||||| ||   | | ||||||||||||| || ||||||||| ||       | ||||| |||||    
T  2912888 ttatttaatactccctccgtcccttaataagtgacccatttagaatttttttaattttgacctaactgactttgaccgtatttttcaactaatatacaaa 2912987  T
Q  299 gataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| | |||||||||||||||||||||    
T  2912988 gataaataacatcatataagatgtcgttagatt 2913020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 10105818 - 10105934
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcata 314  Q
    |||||||| ||||||||||| | ||| | |||| | ||||||||| || |||| ||| ||||||       | ||||| | |||||||||||||| ||||    
T  10105818 tccgtcccacaatagatgactcgtttaaaaatgagcaattttgacttaacttattttaaccatatttttctactaatatataaagataaataatatcata 10105917  T
Q  315 taagatgtcgttagatt 331  Q
    |||||||||||||||||    
T  10105918 taagatgtcgttagatt 10105934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 28483037 - 28483160
Alignment:
Q  208 tactccctcc-gtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||| ||||||||||| |||| |  ||||| |||||| |||||||| ||| |||||||| ||||||       | |||||   |||||||||||    
T  28483037 tactccctcccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatttttctactaatatt-aaagataaata 28483135  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  28483136 atatcatataagatgtcgttagatt 28483160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 11313986 - 11314032
Alignment:
Q  116 ttttaataaaaaataagtgggagtagacttgctaacgtactcattca 162  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  11313986 ttttagtaaaaaataagtgggagtagacttgctaacttactctttca 11314032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 35117279 - 35117381
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||| || |||||||| |  |||||||||| |||||| |||||| || || |||||||||||||||       | ||||| |||||||||||||    
T  35117279 ttactccctctgttccgcaataaagaacccatttgaaaatgtgcaattttaacataacttactttgaccatatttttccactaatatacaaagataaata 35117378  T
Q  307 ata 309  Q
    |||    
T  35117379 ata 35117381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 16120862 - 16120819
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||    
T  16120862 taatatacaaagataaataatatcatataaaatgtcgttagatt 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 29793442 - 29793314
Alignment:
Q  203 tttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagata 302  Q
    |||||||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||    
T  29793442 tttattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagata 29793343  T
Q  303 aataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||||||||||||    
T  29793342 aataatatcatataagatgtcgttagatt 29793314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 9484593 - 9484719
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    |||||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||    
T  9484593 tattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaa 9484692  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  9484693 taatatcatataagatgtcgttagatt 9484719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 42098687 - 42098563
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  42098687 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaata 42098588  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  42098587 atatcatataagatgtcgttagatt 42098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 2643332 - 2643205
Alignment:
Q  204 ttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataa 303  Q
    |||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||||| ||||||||||||||       | ||||| ||||| ||||    
T  2643332 ttattactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatatttttctactaatatacaaatataa 2643233  T
Q  304 ataatagcatataagatgtcgttagatt 331  Q
    |||||| ||||||||||| |||||||||    
T  2643232 ataatatcatataagatgccgttagatt 2643205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 49076485 - 49076362
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  49076485 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 49076386  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  49076385 tatcatataagatgtcgttagatt 49076362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 29809342 - 29809468
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||||||||||||||||||||||||| |||||| ||| || |||||||| ||||||||||| |||||||       ||||||| |||||||||||    
T  29809342 tattactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgatctagcttacttcgaccatatttttctattaatatacaaagataaa 29809441  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||  |||||||||| ||||||||||    
T  29809442 taatgtcatataagatatcgttagatt 29809468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 331
Target Start/End: Original strand, 1778355 - 1778484
Alignment:
Q  202 atttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagat 301  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||| || ||||||||| ||||||||||||||||||       | ||||| ||| ||||    
T  1778355 atttattacttcctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacttagcttactttgaccatatttttctactaatatacatagat 1778454  T
Q  302 aaataatagcatataagatgtcgttagatt 331  Q
    |||||||| |||||||||| ||||||||||    
T  1778455 aaataatatcatataagatatcgttagatt 1778484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 12948040 - 12948163
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||   ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  12948040 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 12948139  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  12948140 tatcatataagatgtcgttagatt 12948163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 16434916 - 16434793
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||| ||||||||||       | ||||| ||||||||||||||    
T  16434916 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttttttactaatatacaaagataaataa 16434817  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  16434816 tatcatataagatgtcgttagatt 16434793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 34263763 - 34263640
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||| | |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  34263763 tactccctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 34263664  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  34263663 tatcatataagatgtcgttagatt 34263640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 329
Target Start/End: Complemental strand, 18013529 - 18013408
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||||| ||  ||||||||| ||||       | ||||| ||||||||||||||    
T  18013529 tactccctccgtcccgtaatagatgacccatttgaaaatgtgcaattttgacataatttactttgatcatatttttctactaatatacaaagataaataa 18013430  T
Q  308 tagcatataagatgtcgttaga 329  Q
    || |||||||||||||||||||    
T  18013429 tatcatataagatgtcgttaga 18013408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 34555149 - 34555274
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||||||||||||||||  |||||  ||||| |||||| | |||||||||| |||||||||||||||       | ||||| ||||||||||||    
T  34555149 attactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatttttctactaatatacaaagataaat 34555248  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  34555249 aatatcatataagatgtcgttagatt 34555274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 901148 - 901024
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||||||||||||||| |||| |  ||||| |||||| |||||||||||| |||||||||| ||||       | ||||| |||||||||||||    
T  901148 ttactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaata 901049  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  901048 atatcatataagatgtcgttagatt 901024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 211 - 331
Target Start/End: Complemental strand, 1334351 - 1334231
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatag 310  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| ||| |||| ||| ||||||       | ||||| |||||||||||| |||     
T  1334351 tccctccgttccgcaatagatgacccatttgaaaatgtgtaattttgatctaacttaattttaccatatttttttactaatatacaaagataaatgatat 1334252  T
Q  311 catataagatgtcgttagatt 331  Q
    |||||||||||||||||||||    
T  1334251 catataagatgtcgttagatt 1334231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 28959058 - 28958935
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| |||||||||||| | |||| | ||| || ||||||||||||||||||||||||||||       | ||||| | ||||||||||||    
T  28959058 tactccctccgtctcgcaatagatgatctatttaaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatataaagataaataa 28958959  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  28958958 tatcatataagatgtcgttagatt 28958935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 29455767 - 29455644
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| | |||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  29455767 tactccctccgtcctgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 29455668  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  29455667 tatcatataagatgtcgttagatt 29455644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 48927861 - 48927738
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| |  ||||| |||||| |||||| ||||| |||||||||||||||       | ||||| ||||||||||||||    
T  48927861 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactttgaccatatttttctactaatatacaaagataaataa 48927762  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  48927761 tatcatataagatgtcgttagatt 48927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 331
Target Start/End: Complemental strand, 52094160 - 52094030
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaaga 300  Q
    |||| |||||| ||||||| |||||||||||||| ||||||| ||| || |||||||| ||| |||| ||||||||||       | ||||| |||||||    
T  52094160 tattaattacttcctccgttccgcaatagatgactcatttgaaaatttgcaattttgatctaacttaatttgaccatatttttctactaatatacaaaga 52094061  T
Q  301 taaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| |||||||||||||||||||||    
T  52094060 taaataatatcatataagatgtcgttagatt 52094030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 328
Target Start/End: Original strand, 50673677 - 50673797
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||| |||||||| ||||||  ||||| |||||| ||||||||| || |||||||||||||||       | ||||| ||||||||||||||    
T  50673677 tactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacttaacttactttgaccatatttttctactaatatacaaagataaataa 50673776  T
Q  308 tagcatataagatgtcgttag 328  Q
    || ||||||||||||||||||    
T  50673777 tatcatataagatgtcgttag 50673797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 53275055 - 53274931
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||| |||||||||||||| |||||| |||||| |||||| |||||||||||| |||| ||||| ||||       | ||||| |||||||||||||    
T  53275055 ttactccttccgtcccgcaataaatgacctatttgaaaatgtgcaattttgacctaacttattttgatcatatttttctactaatatacaaagataaata 53274956  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||| ||||||||    
T  53274955 atatcatataagatgttgttagatt 53274931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 32961246 - 32961369
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| | |||||||||||||||||||||||| | ||| || |||||||||||| |||| ||||||||||       | ||||| ||||||||||||||    
T  32961246 tactcctttcgtcccgcaatagatgacccatttaaaaatttgcaattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataa 32961345  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||| ||||||||||||    
T  32961346 tatcatataagttgtcgttagatt 32961369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 34669613 - 34669731
Alignment:
Q  213 cctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagca 312  Q
    |||||||||||||||| |||||   ||||| |||||| |||||||||||| |||||||||| ||||       | ||||| |||||||||||||||| ||    
T  34669613 cctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataatatca 34669712  T
Q  313 tataagatgtcgttagatt 331  Q
    |||||||||||||||||||    
T  34669713 tataagatgtcgttagatt 34669731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 53055683 - 53055561
Alignment:
Q  209 actccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataat 308  Q
    |||||||||||||  ||||| |||||| |||||| ||||||||||||||||||| || | ||||||||||       | ||||| |||||||||||||||    
T  53055683 actccctccgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaactaattttgaccatatttttctactaatatacaaagataaataat 53055584  T
Q  309 agcatataagatgtcgttagatt 331  Q
    | ||| |||||||||||||||||    
T  53055583 atcatttaagatgtcgttagatt 53055561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 4229247 - 4229124
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||| ||| |||||| |||||  |||||| ||| || ||||||||||||||||||||||| ||||       | ||||| ||| ||||||||||    
T  4229247 tactccctccatcctgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatttttttactaatatacatagataaataa 4229148  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  4229147 tatcatataagatgtcgttagatt 4229124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 4945910 - 4945787
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||| | |||||||||  |||||| ||| || |||||||||||| |||||||||||||||       | ||||| ||| ||||||||||    
T  4945910 tactccctccgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactttgaccatatttttctactaatatacatagataaataa 4945811  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| ||||||||||    
T  4945810 tatcatataagatatcgttagatt 4945787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 331
Target Start/End: Complemental strand, 36594467 - 36594354
Alignment:
Q  219 tcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata-nnnnnnnattaatagacaaagataaataatagcatataa 317  Q
    |||||||| |||||| |||||||| ||||||||||||||||||| |||| ||||| ||||        ||||||| | |||||||||||||| |||||||    
T  36594467 tcccgcaacagatgatccatttgaaaatgtgtaattttgacctaacttattttgatcatattttttctattaatatataaagataaataatatcatataa 36594368  T
Q  318 gatgtcgttagatt 331  Q
    ||||||||||||||    
T  36594367 gatgtcgttagatt 36594354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 4464881 - 4465004
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||||||||||||| | |||||| ||| || ||| || |||||| ||||||||| ||||       | ||||  ||| ||||||||||    
T  4464881 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaatgttaacctagtttactttgatcatatttttctactaatgtacatagataaataa 4464980  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  4464981 tatcatataagatgtcgttagatt 4465004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 29720395 - 29720518
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| |  ||||| |||||| |||||||||||| |||||||||| | ||       | ||||| | ||||||||||||    
T  29720395 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcctatttttccactaatatataaagataaataa 29720494  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||| ||||    
T  29720495 tatcatataagatgtcgttggatt 29720518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 46866343 - 46866466
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||   ||||| |||||| |||||||||||| |||| |||| | |||       | ||||| ||||||||||||||    
T  46866343 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttattttggcaatatttttctactaatatacaaagataaataa 46866442  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||| ||||||||    
T  46866443 tatcatataagatgttgttagatt 46866466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 36179195 - 36179072
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||| ||||||||| ||||| || |||  ||||| |||||| ||||||||| ||  ||||||||| ||||       | ||||| ||||||||||||||    
T  36179195 tactctctccgtcccacaataaataacctgtttgaaaatgtgcaattttgacttaatttactttgatcatatttttctactaatatacaaagataaataa 36179096  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  36179095 tatcatataagatgtcgttagatt 36179072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 331
Target Start/End: Complemental strand, 47340130 - 47340020
Alignment:
Q  221 ccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagat 320  Q
    |||||||| |||||||||||||  ||||| |||||||| |||  ||||||||| ||||       | ||||| | |||||||||||||| ||||||||||    
T  47340130 ccgcaatatatgacccatttgaagatgtgcaattttgatctaatttactttgatcatatttttctactaatatataaagataaataatatcatataagat 47340031  T
Q  321 gtcgttagatt 331  Q
    |||||||||||    
T  47340030 gtcgttagatt 47340020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 38834024 - 38833923
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| |||| ||||||||||| ||||||  ||| | ||||||||||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  38834024 tacttcctctgtcccgcaataaatgacctgtttaaaaatgtgtaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 38833925  T
Q  308 ta 309  Q
    ||    
T  38833924 ta 38833923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 44782043 - 44781979
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttacttt 271  Q
    ||||||||||||||||||||||||||||| |||||| ||| || |||||||| ||| ||||||||    
T  44782043 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgaactaacttacttt 44781979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 331
Target Start/End: Original strand, 49818750 - 49818880
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaaga 300  Q
    ||||| ||| ||||| |||||||||||||||||   | |||| ||| || ||||||||||||  ||||||||||||||       | ||||| ||| |||    
T  49818750 tatttgttattcccttcgtcccgcaatagatgatttagttgaaaatttgcaattttgacctaatttactttgaccatatttttctactaatatacataga 49818849  T
Q  301 taaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| ||||| |||| ||||||||||    
T  49818850 taaataatatcatattagatatcgttagatt 49818880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 14751040 - 14750997
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  14751040 taatatacaaagataaataatatcatataagatgtcgttagatt 14750997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 14751099 - 14751040
Alignment:
Q  210 ctccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttact 269  Q
    |||||||| |||||||||||||||||  ||||| |||||| |||||||||||| ||||||    
T  14751099 ctccctccctcccgcaatagatgacctgtttgaaaatgtgcaattttgacctaacttact 14751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 47069406 - 47069472
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgac 274  Q
    ||||||||||||||| ||||||||||| ||||||| ||| |  |||||||||||| | |||||||||    
T  47069406 tactccctccgtcccacaatagatgacacatttgaaaattttcaattttgacctaacctactttgac 47069472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 935034 - 935085
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgaccta 262  Q
    ||||||||||||||| ||||||| |||||||| |||||||| | ||||||||    
T  935034 tccctccgtcccgcagtagatgatccatttgacaatgtgtactattgaccta 935085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 3817811 - 3817846
Alignment:
Q  296 aaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||| |||||||||||||||||||||    
T  3817811 aaagataaataatatcatataagatgtcgttagatt 3817846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 12250383 - 12250426
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  12250383 taatatacaaagataaataacatcatataagatgtcgttagatt 12250426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 29445015 - 29444981
Alignment:
Q  297 aagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| |||||||||||||||||||||    
T  29445015 aagataaataatatcatataagatgtcgttagatt 29444981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 39099041 - 39099086
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||||||| ||||| |||||| ||||||||    
T  39099041 attaatatacaaagataaataatatcatattagatgttgttagatt 39099086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 9011885 - 9011845
Alignment:
Q  122 taaaaaataagtgggagtagacttgctaacgtactcattca 162  Q
    |||||| ||||||||||||||||||||||| ||||| ||||    
T  9011885 taaaaactaagtgggagtagacttgctaacttactccttca 9011845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 31787167 - 31787203
Alignment:
Q  295 caaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  31787167 caaagataaataatatcatataagatgttgttagatt 31787203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 329
Target Start/End: Complemental strand, 1821699 - 1821575
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||||||||||| |||||||||| || |||||| |||||| |||||||||||| |||||||||||||||       ||||||| |||||||||||    
T  1821699 tattactccctccgtccggcaatagatggcctatttgaaaatgtgcaattttgacctaacttactttgaccatatttttccattaatatacaaagataaa 1821600  T
Q  305 taatagcatataagatgtcgttaga 329  Q
    ||||| |||||||||||||||||||    
T  1821599 taatatcatataagatgtcgttaga 1821575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 45299316 - 45299441
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||    
T  45299316 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttatactaatatacaaagataaat 45299415  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  45299416 aatatcatataagatgtcgttagatt 45299441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 43453233 - 43453110
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||||| |||||||| ||||||   |||||||||||||||||| |||| ||||||||||       ||||||| ||||||||||||||    
T  43453233 tactccctccgtcccgcattagatgactcatttgcagatgtgtaattttgacctaacttattttgaccatatttttctattaatatacaaagataaataa 43453134  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  43453133 tatcatataagatgtcgttagatt 43453110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 44452197 - 44452318
Alignment:
Q  210 ctccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataata 309  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||       | ||| | |||||||| |||||||    
T  44452197 ctccctctgtcccgcaatagatgtcccatttgaaaatgtgtaattttgacctaacttactttgaccatatttttctactaacatacaaagatgaataata 44452296  T
Q  310 gcatataagatgtcgttagatt 331  Q
     |||||||||||||||||||||    
T  44452297 tcatataagatgtcgttagatt 44452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 10100581 - 10100458
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||   ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  10100581 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 10100482  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  10100481 tatcatataagatgtcgttagatt 10100458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 331
Target Start/End: Original strand, 52749273 - 52749404
Alignment:
Q  200 ttatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaag 299  Q
    ||||||| ||||||||||||||||||||| ||||||  ||||| |||||| |||||| ||||| |||| ||||||||||       | ||||| ||||||    
T  52749273 ttatttagtactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaatttttacctaacttattttgaccatatttttctactaatatacaaag 52749372  T
Q  300 ataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||| |||||||||||||||||||||    
T  52749373 ataaataatatcatataagatgtcgttagatt 52749404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 8048819 - 8048693
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||||||||||| ||||||||||||| |||||| ||| || ||||||||||||||||| ||||||||||       | ||||| ||| |||||||    
T  8048819 tattactccctccgtcctgcaatagatgacctatttgaaaatttgcaattttgacctagcttattttgaccatatttttctactaatatacatagataaa 8048720  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||| ||||||||||    
T  8048719 taatatcatataagatatcgttagatt 8048693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 5606459 - 5606336
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||| |||||| || ||| |||||||| ||| |||||||| ||||||       | ||||| ||||||||||||||    
T  5606459 tactccctccgtcccgcaataaatgacctatttgaaaaagtgcaattttgatctaacttactttaaccatatttttctactaatatacaaagataaataa 5606360  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  5606359 tatcatataagatgtcgttagatt 5606336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 28490160 - 28490283
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||| ||||||||||||||       | ||||| ||| ||||||||||    
T  28490160 tactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacatagtttactttgaccatatttttctaataatatacatagataaataa 28490259  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| ||||||||||    
T  28490260 tatcatataagatatcgttagatt 28490283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 31932246 - 31932123
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||||||||||||| | |||||| ||| || ||||||||||||| ||||||||||||||       | ||||| ||||| ||||||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagtttactttgaccatatttttctactaatatacaaatataaataa 31932147  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||||| |||||||||    
T  31932146 tatcatataagatgccgttagatt 31932123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 199 - 331
Target Start/End: Original strand, 10124099 - 10124232
Alignment:
Q  199 tttatttatt-actccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaa 297  Q
    |||||||||| ||||| ||| |||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||    
T  10124099 tttatttatttactccatccatcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaa 10124198  T
Q  298 agataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||  ||||||||||||||||||||    
T  10124199 agataaataatattatataagatgtcgttagatt 10124232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 6017517 - 6017394
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| |||||||||||||||| |||| |  ||||| |||||| |||||||| ||| |||||||||||||||       | ||||| ||||||||||||||    
T  6017517 tacttcctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataaataa 6017418  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  6017417 tatcatataagatgtcgttagatt 6017394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 41414203 - 41414326
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| ||||||||| ||| |||||| ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||||||    
T  41414203 tactccctccgtcctgcaatagattacctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 41414302  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||| ||| ||||||||||    
T  41414303 tatcatatatgatatcgttagatt 41414326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 41855789 - 41855666
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||| |||||| |||||| ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||||||    
T  41855789 tactccctccgtcccgtaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 41855690  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| || |||||||    
T  41855689 tatcatataagatatcattagatt 41855666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 44240519 - 44240642
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||| |||| | ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||||||    
T  44240519 tactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 44240618  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| || |||||||    
T  44240619 tatcatataagatatcattagatt 44240642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 50014629 - 50014506
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||  |||||||||  |||||| ||| || |||||||| |||||||||||||||||||       | ||||| ||| ||||||||||    
T  50014629 tactccctccgtcccgtcatagatgacttatttgaaaatttgcaattttgatctagcttactttgaccatatttttctactaatatacatagataaataa 50014530  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  50014529 tatcatataagatgtcgttagatt 50014506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 31651960 - 31651846
Alignment:
Q  217 cgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatata 316  Q
    |||||||||||| |||||| |||||| |||||| |||||| |||| ||||| ||||||||||       | ||||| |||||||||||||||| ||||||    
T  31651960 cgtcccgcaataaatgacctatttgaaaatgtgcaattttaacctggcttaatttgaccatatttttctactaatatacaaagataaataatatcatata 31651861  T
Q  317 agatgtcgttagatt 331  Q
    |||||||||||||||    
T  31651860 agatgtcgttagatt 31651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 7075398 - 7075275
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||| |||||||||| |||||   ||||| || ||| |||||||| ||| |||||||||||||||       | ||||| ||||||||||||||    
T  7075398 tactccctccatcccgcaataaatgacttgtttgaaaacgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataaataa 7075299  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  7075298 tatcatataagatgtcgttagatt 7075275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 331
Target Start/End: Complemental strand, 49903740 - 49903630
Alignment:
Q  221 ccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagat 320  Q
    ||||||||||||| |||||| | |||||| ||||||||||||  ||||||||| ||||       | ||||| |||||||||||||||| ||||||||||    
T  49903740 ccgcaatagatgatccatttaaaaatgtgaaattttgacctaatttactttgatcatatttttctactaatatacaaagataaataatatcatataagat 49903641  T
Q  321 gtcgttagatt 331  Q
    |||||||||||    
T  49903640 gtcgttagatt 49903630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 26543874 - 26543991
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    ||||||||||||||| |||| |  ||||| |||||  |||||||||||| |||||||||||||||       | ||||| ||||||||||||||||  ||    
T  26543874 ctccgtcccgcaataaatgatctgtttgaaaatgtacaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatattat 26543973  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||||||||||||||    
T  26543974 ataagatgtcgttagatt 26543991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 2126652 - 2126778
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||| | ||||||||||||||  |||| | |||||||||||||||||||  ||||||||||||||       ||||||| ||||| ||||||||    
T  2126652 tactccctccattccgcaatagatgacttatttaaaaatgtgtaattttgacctaatttactttgaccatatttttttattaatatacaaaaataaataa 2126751  T
Q  308 ---tagcatataagatgtcgttagatt 331  Q
       || |||||||||||||||||||||    
T  2126752 tactaccatataagatgtcgttagatt 2126778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 29253479 - 29253549
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    |||||| ||||||||||||||||||| | |||||| ||| || ||||||||||||||||||||||||||||    
T  29253479 tactccatccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccata 29253549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 4489067 - 4489184
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    ||||||||||||||||| || | |||||| ||| || |||||| | ||||||||| |||||||||       | ||||| ||| |||||||||||| |||    
T  4489067 ctccgtcccgcaatagacgatctatttgaaaatttgcaattttaatctagcttacgttgaccatatttttctactaatatacacagataaataatatcat 4489166  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||||||||||||||    
T  4489167 ataagatgtcgttagatt 4489184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Complemental strand, 8251217 - 8251116
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| |||||||| ||| |||||||||||||||       | ||||| ||||||||||||||    
T  8251217 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgatctaacttactttgaccatattttcttaataatatacaaagataaataa 8251118  T
Q  308 ta 309  Q
    ||    
T  8251117 ta 8251116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 331
Target Start/End: Complemental strand, 40059027 - 40058912
Alignment:
Q  218 gtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaataga--caaagataaataatagcatat 315  Q
    ||||||||||||||||||||||||| | | | ||||||||| ||| |||||||||||| ||       | ||||| |  ||||||||||||||| |||||    
T  40059027 gtcccgcaatagatgacccatttgaaattttttaattttgatctaacttactttgaccgtatttttctactaatatatacaaagataaataatatcatat 40058928  T
Q  316 aagatgtcgttagatt 331  Q
    ||||||||||||||||    
T  40058927 aagatgtcgttagatt 40058912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 48389081 - 48389189
Alignment:
Q  223 gcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgt 322  Q
    |||||| |||||| |||||| ||| || ||||||||||||||||||||||||||||       | ||||| ||| |||||||||||| |||||||||| |    
T  48389081 gcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataatatcatataagatat 48389180  T
Q  323 cgttagatt 331  Q
    | |||||||    
T  48389181 cattagatt 48389189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 52688520 - 52688654
Alignment:
Q  198 ttttatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnna--ttaatagac 295  Q
    ||||||||| ||||| ||  |||||||||||||||| | |||||| |||||| |||||||||||| |||||||||||  ||       |   ||||| ||    
T  52688520 ttttatttaatactctctttgtcccgcaatagatgatc-atttgaaaatgtggaattttgacctaacttactttgactgtatttttctactataatatac 52688618  T
Q  296 aaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||| |||||||||||||||||||||    
T  52688619 aaagataaataatatcatataagatgtcgttagatt 52688654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 5945765 - 5945888
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||| ||||||||||||||| |||||   ||||| |||||| ||||||||| ||  ||| ||| ||||||       | ||||| ||||||||||||||    
T  5945765 tactctctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacataatttattttaaccatatttttctactaatatacaaagataaataa 5945864  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  5945865 tatcatataagatgtcgttagatt 5945888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 331
Target Start/End: Original strand, 44741356 - 44741466
Alignment:
Q  221 ccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagat 320  Q
    |||||||| |||||  ||||||  ||||| |||||||| ||| |||| ||||||||||       | ||||| |||||||||||||||| ||||||||||    
T  44741356 ccgcaataaatgacatatttgaatatgtgcaattttgatctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagat 44741455  T
Q  321 gtcgttagatt 331  Q
    |||||||||||    
T  44741456 gtcgttagatt 44741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 40883417 - 40883534
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    |||| ||||||||||||||| |||||| | |||||| |||||||||||| |||||||||| ||||       | ||||| ||||| ||||||| || |||    
T  40883417 ctccatcccgcaatagatgatccatttaaaaatgtgaaattttgacctaacttactttgatcatatttttcaactaatatacaaatataaatagtatcat 40883516  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||| || |||||||    
T  40883517 ataagatatcattagatt 40883534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 23393239 - 23393355
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcata 314  Q
    ||||||| |||||| |||||| |||| | ||| || |||||| | |||| ||||||||||||||       | ||||| ||||| |||||||||| ||||    
T  23393239 tccgtcctgcaataaatgacctatttaaaaatttgcaattttaaactagtttactttgaccatatttttatactaatatacaaatataaataatatcata 23393338  T
Q  315 taagatgtcgttagatt 331  Q
    |||||||||||||||||    
T  23393339 taagatgtcgttagatt 23393355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 320
Target Start/End: Original strand, 23337813 - 23337919
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatag 310  Q
    ||||||||||| ||||   ||||||||||||| ||| ||||| ||||||||| |||| ||||||||||       | ||||| ||||||||||||||||     
T  23337813 tccctccgtccagcaa---atgacccatttgaaaatttgtaaatttgacctaacttagtttgaccatatttttctactaatatacaaagataaataatat 23337909  T
Q  311 catataagat 320  Q
    ||||||||||    
T  23337910 catataagat 23337919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 33526230 - 33526107
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| |||||| ||||||||||||  ||||| | ||||||||||||||| |||  |||||||||| |||       | ||||| ||||| ||||||||    
T  33526230 tactccatccgtctcgcaatagatgattcatttaaaaatgtgtaattttgatctaatttactttgactatatttttctactaatatacaaaaataaataa 33526131  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    |  ||||||||||||| |||||||    
T  33526130 tttcatataagatgtcattagatt 33526107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 48312029 - 48312151
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| |||||||||||||||| |||||||| |||||| ||||||| | || |||| ||||| | ||       | ||||| ||||||||||||||    
T  48312029 tactccctcagtcccgcaatagatga-ccatttgaaaatgtgcaattttggcttaacttattttgatcgtatttttctactaatatacaaagataaataa 48312127  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    ||  ||||||| ||||||||||||    
T  48312128 tattatataaggtgtcgttagatt 48312151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 9334377 - 9334504
Alignment:
Q  208 tactccctccgtcccgcaatagat----gacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataa 303  Q
    ||||||||| ||||||||||||||    || | |||||| ||| ||||||||||| ||| ||| |||||||||||       | ||||  ||| ||||||    
T  9334377 tactccctctgtcccgcaatagatagatgatctatttgaaaatttgtaattttgatctaacttgctttgaccatatttttctactaatgtacatagataa 9334476  T
Q  304 ataatagcatataagatgtcgttagatt 331  Q
    |||||| |||||||||||||||||||||    
T  9334477 ataatatcatataagatgtcgttagatt 9334504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 9358150 - 9358277
Alignment:
Q  208 tactccctccgtcccgcaatagat----gacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataa 303  Q
    ||||||||| ||||||||||||||    || | |||||| ||| ||||||||||| ||| ||| |||||||||||       | ||||  ||| ||||||    
T  9358150 tactccctctgtcccgcaatagatagatgatctatttgaaaatttgtaattttgatctaacttgctttgaccatatttttctactaatgtacatagataa 9358249  T
Q  304 ataatagcatataagatgtcgttagatt 331  Q
    |||||| |||||||||||||||||||||    
T  9358250 ataatatcatataagatgtcgttagatt 9358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 38786997 - 38786891
Alignment:
Q  225 aatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcg 324  Q
    ||||||||| |||||||| ||| || ||||||||  || |||||||||| ||||       | ||||| |||||||||||||||| |||||||||||| |    
T  38786997 aatagatgatccatttgaaaatatgcaattttgatataacttactttgatcatatttttcaactaatatacaaagataaataatatcatataagatgttg 38786898  T
Q  325 ttagatt 331  Q
    |||||||    
T  38786897 ttagatt 38786891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 2139017 - 2138974
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  2139017 taatatacaaagataaataatatcatataagatgtcgttagatt 2138974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 36035701 - 36035809
Alignment:
Q  223 gcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgt 322  Q
    |||||| ||||||  ||| | ||||||||||||||| |||  ||||||||| ||||       | ||||| |||||||||||||||| ||||||| ||||    
T  36035701 gcaataaatgacctgtttaaaaatgtgtaattttgatctaatttactttgatcatatttttctactaatatacaaagataaataatatcatataaaatgt 36035800  T
Q  323 cgttagatt 331  Q
    |||||||||    
T  36035801 cgttagatt 36035809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 10648252 - 10648143
Alignment:
Q  225 aatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnat---taatagacaaagataaataatagcatataagatg 321  Q
    ||||||||| | |||||| ||||||||||||||||||| |||| ||||||||||        |    |||| |||||||||||||||| |||||||||||    
T  10648252 aatagatgatctatttgaaaatgtgtaattttgacctaacttattttgaccatatttttttttctacaatatacaaagataaataatatcatataagatg 10648153  T
Q  322 tcgttagatt 331  Q
    || |||||||    
T  10648152 tccttagatt 10648143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 5117422 - 5117379
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  5117422 taatatacaaagataaataacatcatataagatgtcgttagatt 5117379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 12685966 - 12685846
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata-nnnnnnnattaatagacaaagataaata 306  Q
    |||||||| ||||||| |||||||||||| ||||| |||||| |||||||| |||  ||| ||||| ||||        | ||| | |||||||||||||    
T  12685966 tactcccttcgtcccgtaatagatgacccgtttgaaaatgtgcaattttgatctaatttattttgatcatattttttctactaacatacaaagataaata 12685867  T
Q  307 atagcatataagatgtcgtta 327  Q
     || |||||||||||||||||    
T  12685866 gtatcatataagatgtcgtta 12685846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 26476997 - 26476954
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  26476997 taatatacaaagataaataacaccatataagatgtcgttagatt 26476954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 44963660 - 44963617
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  44963660 taatatacaaagataaataacatcatataagatgtcgttagatt 44963617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 50295924 - 50295881
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||    
T  50295924 taatatacaaagataaataatatcatataagatgttgttagatt 50295881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 3138605 - 3138674
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    ||||||| | |||||| ||||||||||| |||||| |||||||  ||||||| || |||||||||||||||    
T  3138605 tactcccacagtcccgtaatagatgacc-atttgaaaatgtgtgtttttgacataacttactttgaccata 3138674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 5489651 - 5489605
Alignment:
Q  116 ttttaataaaaaataagtgggagtagacttgctaacgtactcattca 162  Q
    |||| |||||| |||||||||||||||||||||||| ||||| ||||    
T  5489651 ttttgataaaagataagtgggagtagacttgctaacttactccttca 5489605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 38737372 - 38737429
Alignment:
Q  202 atttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgac 259  Q
    |||| |||||||||||||||| |||||||||| | |||||| ||||| |||| |||||    
T  38737372 atttcttactccctccgtcccacaatagatgatctatttgacaatgtataatattgac 38737429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 329
Target Start/End: Complemental strand, 16126146 - 16126024
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  16126146 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatttttccactaatatacaaagataaata 16126047  T
Q  307 atagcatataagatgtcgttaga 329  Q
    ||| |||||||||||||||||||    
T  16126046 atatcatataagatgtcgttaga 16126024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 209 - 329
Target Start/End: Complemental strand, 16127842 - 16127722
Alignment:
Q  209 actccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataat 308  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||| ||||       | ||||| |||||||||||||||    
T  16127842 actccctccgtcccgcaataaatgacctatttgaaaatgtgtaattttgacctaacttactttgatcatatttttccactaatatacaaagataaataat 16127743  T
Q  309 agcatataagatgtcgttaga 329  Q
    | |||||||||||||||||||    
T  16127742 atcatataagatgtcgttaga 16127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 8896271 - 8896394
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||| | |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  8896271 tactccctccattccgcaatagatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 8896370  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || || ||||||||||||||||||    
T  8896371 tatcacataagatgtcgttagatt 8896394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 207 - 329
Target Start/End: Original strand, 16333479 - 16333601
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||       | | ||| |||||||||||||    
T  16333479 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatttttccactgatatacaaagataaata 16333578  T
Q  307 atagcatataagatgtcgttaga 329  Q
    ||| |||||||||||||||||||    
T  16333579 atatcatataagatgtcgttaga 16333601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 7724672 - 7724551
Alignment:
Q  210 ctccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataata 309  Q
    ||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||||    
T  7724672 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataata 7724573  T
Q  310 gcatataagatgtcgttagatt 331  Q
     |||||||||||||||||||||    
T  7724572 tcatataagatgtcgttagatt 7724551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 45036363 - 45036486
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||| || |||||  ||||||||       | ||||| ||||||||||||||    
T  45036363 tactccctccgtcctgcaatagatgacccatttaaaaatgtgtaattttgacttaacttacgctgaccatatttttctactaatatacaaagataaataa 45036462  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  45036463 tatcatataagatgtcgttagatt 45036486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 12208988 - 12209112
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||| |||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  12208988 ttacttcctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaata 12209087  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||| ||||    
T  12209088 atatcatataagatgtcgttggatt 12209112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 8373434 - 8373557
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| ||||||||||| |||| |  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  8373434 tactccctctgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 8373533  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  8373534 tatcatataagatgtcgttagatt 8373557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 37316876 - 37316999
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||||||| ||||||| |||||| ||| || ||||||||||| | ||||||||||||||       | ||||| ||| ||||||||||    
T  37316876 tactccctccgtcccgcaatcgatgacctatttgaaaatttgcaattttgacctggtttactttgaccatatatttctactaatatacatagataaataa 37316975  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  37316976 tatcatataagatgtcgttagatt 37316999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 41575562 - 41575685
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||||||||||||||||||||| ||||       | ||||| ||| | ||||||||    
T  41575562 tactccctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgatcatatttttctactaatatacatatataaataa 41575661  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  41575662 tatcatataagatgtcgttagatt 41575685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 18504469 - 18504595
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||| ||||||||||| ||||||||||  |||||| |||||||||||||||| || |||| ||||||||||       | ||||| |||||||| ||    
T  18504469 tattacttcctccgtcccgtaatagatgacttatttgaaaatgtgtaattttgacgtaacttattttgaccatatttttctactaatatacaaagatcaa 18504568  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  18504569 taatatcatataagatgtcgttagatt 18504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 10333643 - 10333518
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||||||||||| || |||| |||| |  ||||| ||||||||||||||||||| |||| ||||||||||       | ||||| ||||||||||||    
T  10333643 attactccctccgtctcgtaataaatgatctgtttgaaaatgtgtaattttgacctaacttattttgaccatatttttctactaatatacaaagataaat 10333544  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  10333543 aatatcatataagatgtcgttagatt 10333518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 41436832 - 41436955
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||| ||||    ||||| ||||| ||||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  41436832 tactccctccgtcccgtaataaatgaaatgtttgaaaatgtataattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 41436931  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  41436932 tatcatataagatgtcgttagatt 41436955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 38963792 - 38963918
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    |||||||||||| |||||  ||||  |||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||    
T  38963792 tattactccctctgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaa 38963891  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  38963892 taatatcatataagatgtcgttagatt 38963918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 2831707 - 2831830
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||| |||| |||| ||| |||| |||||| | ||||||||||||||||||| |||||||||||||||       | ||||| ||||| ||||||||    
T  2831707 tactcccaccgtaccgcgataaatgatccatttaaaaatgtgtaattttgacctaacttactttgaccatatttttctactaatatacaaatataaataa 2831806  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||| |||||||||||||||||    
T  2831807 tatcatgtaagatgtcgttagatt 2831830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 6730166 - 6730043
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| |||||||||||||| | |||| ||| || |||||||||||||||||| |||||||||       | ||||| ||| ||||||||||    
T  6730166 tactccctccgtctcgcaatagatgacctacttgaaaatttgcaattttgacctagcttacattgaccatatttttctactaatatacatagataaataa 6730067  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| ||||| ||||    
T  6730066 tatcatataagatatcgttggatt 6730043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 40471736 - 40471859
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| || |||  ||||| |||||| ||||||||| || |||| ||||| ||||       | ||||| ||||||||||||||    
T  40471736 tactccctccgtcccgcaataaataacctgtttgaaaatgtgcaattttgacttaacttattttgatcatatttttttactaatatacaaagataaataa 40471835  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  40471836 tatcatataagatgtcgttagatt 40471859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 331
Target Start/End: Complemental strand, 31603477 - 31603356
Alignment:
Q  210 ctccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataata 309  Q
    ||||||||||||| ||||| ||||||  ||||| |||||| |||||||||||| ||||||||||| |||       | ||||| ||||| ||||||||||    
T  31603477 ctccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacaatatttttctactaatatacaaatataaataata 31603378  T
Q  310 gcatataagatgtcgttagatt 331  Q
     |||||||||| ||||||||||    
T  31603377 tcatataagatatcgttagatt 31603356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 43328849 - 43328741
Alignment:
Q  223 gcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgt 322  Q
    ||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||||       | ||||| ||||||||||||||||  ||||||||| |    
T  43328849 gcaatagatgatccatttgaaaatgtataattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatattatataagatat 43328750  T
Q  323 cgttagatt 331  Q
    |||||||||    
T  43328749 cgttagatt 43328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 5096247 - 5096371
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||||||||||||||| || |||  ||||| |||||  ||||||||| || |||| ||||| ||||       | ||||| | |||||||||||    
T  5096247 ttactccctccgtcccgcaataaattacctgtttgaaaatgtacaattttgacataacttattttgatcatatttttctactaatatataaagataaata 5096346  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  5096347 atatcatataagatgtcgttagatt 5096371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 15177376 - 15177492
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcata 314  Q
    |||||| || ||||||||||| |||||| |||||  |||||| |  || |||||||||||||||       | ||||| |||||||||||||||| ||||    
T  15177376 tccgtctcgtaatagatgacctatttgaaaatgtacaattttaatttaacttactttgaccatatttttatactaatatacaaagataaataatatcata 15177475  T
Q  315 taagatgtcgttagatt 331  Q
    |||||||||||||||||    
T  15177476 taagatgtcgttagatt 15177492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 16646241 - 16646369
Alignment:
Q  203 tttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagata 302  Q
    ||||||| |||||| ||||| ||||| |||| | |||| | ||| |||||||||||||||||||||||||||||||       | |||||  || |||||    
T  16646241 tttattattccctcagtcccacaataaatgagctatttaaaaatttgtaattttgacctagcttactttgaccatatttttctactaatattcatagata 16646340  T
Q  303 aataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||| || |||||||    
T  16646341 aataataccatataagatatctttagatt 16646369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 6075125 - 6075248
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| |||||||| ||||||||||||| | ||||| ||| |  ||||||||  || |||||||||||||||       ||||||| ||||||||||||||    
T  6075125 tactacctccgtcgcgcaatagatgactcgtttgaaaattttcaattttgatttaacttactttgaccatatttttctattaatatacaaagataaataa 6075224  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    |  |||||| ||||||||||||||    
T  6075225 tgtcatatacgatgtcgttagatt 6075248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 22718606 - 22718483
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||| ||||||| || |||| |||| | |||||| ||| || ||||||||||||||||||||||||||||       | ||||| | | ||||||||||    
T  22718606 tactctctccgtcgcgtaataaatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatatatagataaataa 22718507  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| ||||||||||    
T  22718506 tatcatataagatatcgttagatt 22718483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 20682653 - 20682720
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgac 274  Q
    ||||||||||||||||||||||| ||||| |||| | ||| || |||||||||| |||||||||||||    
T  20682653 ttactccctccgtcccgcaatagttgacctatttaaaaatttgcaattttgacccagcttactttgac 20682720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 25627037 - 25627088
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttga 258  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  25627037 ttactccctccatcccgcaacagatgacccatttgaaaatgtgtaattttga 25627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 4137410 - 4137532
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||   ||||| |||||  |||||||| |||  ||| ||||| ||||       | ||||| ||||||||||||||    
T  4137410 tactccctccgtcccgcaataaatgacatgtttgaaaatgtacaattttgatctaattta-tttgatcatatttttctactaatatacaaagataaataa 4137508  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  4137509 tatcatataagatgtcgttagatt 4137532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 26436747 - 26436627
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||| |||||||| ||||||||||||| || ||| |||| |||||| ||| |||| ||||| ||||       | ||||| ||||||    |||    
T  26436747 ttactccctcagtcccgcattagatgacccattggaaaatatgtacttttgatctaacttattttgatcatatttttctagtaatatacaaag----ata 26436652  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  26436651 atatcatataagatgtcgttagatt 26436627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 41319906 - 41319864
Alignment:
Q  289 aatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  41319906 aatatacaaagataaataatatcatataagatgtcgttagatt 41319864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 1749193 - 1749112
Alignment:
Q  250 taattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| || ||||||||| ||       | ||||| |||||||||||||| | |||||||||||||||||||||    
T  1749193 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaataacatcatataagatgtcgttagatt 1749112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 7601380 - 7601337
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  7601380 taatatacaaagataaataacatcatataagatgtcgttagatt 7601337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 9273433 - 9273476
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  9273433 taatatacaaagataaataacatcatataagatgtcgttagatt 9273476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 323
Target Start/End: Original strand, 25766443 - 25766559
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||| ||||||| | ||||||||| |  ||||| |||||| | | ||||||||   ||||| |||||||       ||||||| |||||||||||||    
T  25766443 ttactccttccgtcctgtaatagatgatctgtttgaaaatgtgcactattgacctaatatacttcgaccatatttttttattaatatacaaagataaata 25766542  T
Q  307 atagcatataagatgtc 323  Q
    ||| |||||||||||||    
T  25766543 atatcatataagatgtc 25766559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 37987919 - 37987876
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||    
T  37987919 taatatacaaagataaataatatcatataagatgtcattagatt 37987876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 15771067 - 15771022
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||| | |||||||||||||| |||||||||||||||| ||||    
T  15771067 attaatatataaagataaataatatcatataagatgtcgtttgatt 15771022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 25762272 - 25762309
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtc 323  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  25762272 attaatatacaaagataaataatatcatataagatgtc 25762309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 43409527 - 43409434
Alignment:
Q  227 tagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagat 320  Q
    ||||||||| |||||| |||||||| | |||||||    |||||||||||||       ||||||| |||||||||||||||| |||| |||||    
T  43409527 tagatgacctatttgaaaatgtgtattattgacctgatatactttgaccatatttttctattaatatacaaagataaataatatcataaaagat 43409434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 739 - 616
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||| ||||||||||||||||||||||| ||| || |||||||||||| |||| ||||||||||       | ||||| ||||||||||||||    
T  739 tactccctccgccccgcaatagatgacccatttgaaaatatgcaattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataa 640  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  639 tatcatataagatgtcgttagatt 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 5376 - 5499
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  5376 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 5475  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  5476 tatcatataagatgtcgttagatt 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 1098175 - 1098298
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  1098175 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 1098274  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  1098275 tatcatataagatgtcgttagatt 1098298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 20040480 - 20040356
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||||||||| |||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  20040480 ttactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaata 20040381  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  20040380 atatcatataagatgtcgttagatt 20040356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 30721750 - 30721626
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||| |||||||||| |||||  |||||| |||||| |||||||||||| |||| ||||||||||       ||||||| |||||||||||||    
T  30721750 ttactccctccatcccgcaataaatgacatatttgaaaatgtgcaattttgacctaacttattttgaccatatttttctattaatatacaaagataaata 30721651  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  30721650 atatcatataagatgtcgttagatt 30721626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 30788205 - 30788324
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||||| || |||||||||||||||       | ||||| ||||||||||||||    
T  30788205 tactccctccgtcccgtaatatatgacccatttgaaaatgtgtaattttgacataacttactttgaccatatttttctactaatatacaaagataaataa 30788304  T
Q  308 tagcatataagatgtcgtta 327  Q
    || | |||||||||||||||    
T  30788305 tatcgtataagatgtcgtta 30788324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 31191241 - 31191118
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||   ||||| |||||| ||||||||||||  ||||||||||||||       ||||||| ||||||||||||||    
T  31191241 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttactttgaccatatttttctattaatatacaaagataaataa 31191142  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  31191141 tatcatataagatgtcgttagatt 31191118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 328
Target Start/End: Complemental strand, 1781209 - 1781089
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||  ||||||||||||||       | ||||| ||||||||||||||    
T  1781209 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaagttactttgaccatatttttctactaatatacaaagataaataa 1781110  T
Q  308 tagcatataagatgtcgttag 328  Q
    || ||||||||||||||||||    
T  1781109 tatcatataagatgtcgttag 1781089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 39925203 - 39925327
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnna-ttaatagacaaagataaata 306  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |  ||||||||||||||       |  ||||| |||||||||||||    
T  39925203 tactccctccgtcccgcaatagatgatccatttgaaaatttgtaattttgaccaaatttactttgaccatattattttacctaatatacaaagataaata 39925302  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  39925303 atatcatataagatgtcgttagatt 39925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 19344763 - 19344640
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| |||||||||||||| ||||||  ||||| |||||| |||||||||||| |||| ||||||||||       | ||||| ||||||||||||||    
T  19344763 tactccttccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttttctactaatatacaaagataaataa 19344664  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  19344663 tatcatataagatgtcgttagatt 19344640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 40316818 - 40316941
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||  |||||| |||||||       | ||||| ||||||||||||||    
T  40316818 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatttttctactaatatacaaagataaataa 40316917  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  40316918 tatcatataagatgtcgttagatt 40316941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 41410723 - 41410600
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||  |||||| |||||||       | ||||| ||||||||||||||    
T  41410723 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatttttctactaatatacaaagataaataa 41410624  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  41410623 tatcatataagatgtcgttagatt 41410600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 13548212 - 13548336
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||||||||  ||||  |||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  13548212 ttactccctccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaata 13548311  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  13548312 atatcatataagatgtcgttagatt 13548336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 331
Target Start/End: Original strand, 14057711 - 14057831
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatag 310  Q
    |||||||||||||||||| |||| |  ||||| ||| || |||||||||||| |||||||||| ||||       ||||||| ||||||||||||||||     
T  14057711 tccctccgtcccgcaataaatgatctgtttgaaaatatgcaattttgacctaacttactttgatcatatttttctattaatatacaaagataaataatat 14057810  T
Q  311 catataagatgtcgttagatt 331  Q
    |||||||||||||||||||||    
T  14057811 catataagatgtcgttagatt 14057831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 20022860 - 20022983
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| ||||| || ||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  20022860 tacttcctccttctcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 20022959  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  20022960 tatcatataagatgtcgttagatt 20022983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 33402655 - 33402532
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| ||||||||| |  ||| | ||||||||||||||||||| |||||||||| ||||       | ||||| ||||||||||||||    
T  33402655 tactccctccgtcccgtaatagatgatctgtttaaaaatgtgtaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 33402556  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||||| |||||||||    
T  33402555 tatcatataagatgccgttagatt 33402532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 331
Target Start/End: Complemental strand, 30211799 - 30211682
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    ||||||||||||||| ||||||  ||| | |||||| |||||||| ||| |||||||||||||||       | ||||| |||||||||||||||| |||    
T  30211799 ctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataaataatatcat 30211700  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||||||||||||||    
T  30211699 ataagatgtcgttagatt 30211682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 9936957 - 9936829
Alignment:
Q  203 tttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagata 302  Q
    |||||||||||||||||||||||||| ||||   |||| | |||||| |||||||| |||  ||| ||||||||||       | ||||| |||||||||    
T  9936957 tttattactccctccgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaatttattttgaccatatttttctactaatatacaaagata 9936858  T
Q  303 aataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||||||||||||    
T  9936857 aataatatcatataagatgtcgttagatt 9936829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 10465360 - 10465236
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||| ||||||||||||||||| |||||| ||| | ||||||||||||| |||||||||||||||         ||||| ||| | |||||||    
T  10465360 ttactccctccctcccgcaatagatgacctatttgaaaatttataattttgacctatcttactttgaccatatttttctgctaatatacatatataaata 10465261  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||| ||||||||||    
T  10465260 atatcatataagatatcgttagatt 10465236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 211 - 331
Target Start/End: Original strand, 34169832 - 34169952
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatag 310  Q
    ||||| ||||||||||||||||| | |||||| ||| || |||||||| |||| ||||||||||||||       | ||||| ||| ||||||||||||     
T  34169832 tcccttcgtcccgcaatagatgatctatttgaaaatttgcaattttgatctagtttactttgaccatatttttctactaatatacatagataaataatat 34169931  T
Q  311 catataagatgtcgttagatt 331  Q
    |||||||||||||||||||||    
T  34169932 catataagatgtcgttagatt 34169952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 1831351 - 1831474
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||| ||  |||||| |||||||       | ||||| ||||||||| ||||    
T  1831351 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacataatttacttcgaccatatttttctactaatatacaaagatatataa 1831450  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  1831451 tatcatataagatgtcgttagatt 1831474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 14633007 - 14633130
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| |||||| |||| |  ||||| |||||| |||||||||||| |||||||||||||||       |  |||| ||||||||||||||    
T  14633007 tactccctccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctacaaatatacaaagataaataa 14633106  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||| ||||||||    
T  14633107 tatcatataagatgtagttagatt 14633130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 20503112 - 20502993
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| ||| ||||  |||||| | ||||||||||||||||||| ||||||| |||||||       |  |||| ||||||||||||||    
T  20503112 tactccctccgtcccgaaattgatggtccatttaaaaatgtgtaattttgacctaacttacttagaccatatttttctaccaatatacaaagataaataa 20503013  T
Q  308 tagcatataagatgtcgtta 327  Q
    || |||||||||||||||||    
T  20503012 tatcatataagatgtcgtta 20502993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 27675540 - 27675663
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||||  |||||| ||| || ||||||||||||||||||||||| ||||       | ||||| ||| ||||||||||    
T  27675540 tactccctccgtcccgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatttttctactaatatacatagataaataa 27675639  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| || |||||||    
T  27675640 tatcatataagatatcattagatt 27675663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 41263193 - 41263070
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||| ||||| ||||    ||| | |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  41263193 tactccctccgtccctcaataaatgatatgtttaaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 41263094  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  41263093 tatcatataagatgtcgttagatt 41263070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 40079979 - 40080104
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||||||||||||  |||||||||||| |||||| ||| |  |||||| ||||| |||||||||||||||       | ||||| ||| ||||||||    
T  40079979 attactccctccgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactttgaccatatttttctactaatatacatagataaat 40080078  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| ||||||||||||||| |||||    
T  40080079 aatatcatataagatgtcgtgagatt 40080104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 331
Target Start/End: Complemental strand, 14607618 - 14607498
Alignment:
Q  211 tccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatag 310  Q
    |||||||||||||||||| |||||   ||||| |||||| ||||||||||||  ||| ||||||||||       | ||||| |||||||||| |||||     
T  14607618 tccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttaatttgaccatatttttctactaatatacaaagataagtaatat 14607519  T
Q  311 catataagatgtcgttagatt 331  Q
    |||||||||||||||||||||    
T  14607518 catataagatgtcgttagatt 14607498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 32474086 - 32473967
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||| ||||||   |||||||||||||||||| ||||||||||||| || || |||| ||||||||||       | ||||| ||||||||||||||    
T  32474086 tactccccccgtccaaaaatagatgacccatttgaaaatgtgtaattttaacataacttattttgaccatatttttctactaatatacaaagataaataa 32473987  T
Q  308 tagcatataagatgtcgtta 327  Q
    || |||||||||| ||||||    
T  32473986 tatcatataagatatcgtta 32473967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 34347474 - 34347594
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa----taatag 310  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| || |||||||||||||||       |  |||| |||||||||||    |||||     
T  34347474 tccgttccgcaatagatgacctatttgaaaatgtgtaattttgacataacttactttgaccatatttttttaaaaatatacaaagataaatacgtaatat 34347573  T
Q  311 catataagatgtcgttagatt 331  Q
    |||||||||||||||||||||    
T  34347574 catataagatgtcgttagatt 34347594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 2799638 - 2799755
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata-nnnnnnnattaatagacaaagataaataatagcat 313  Q
    ||||| ||| |||||||||||||||||| |||||| |||||||||||| |||||||||||  ||        | ||||| |||||||||||||||| |||    
T  2799638 tccgttccgtaatagatgacccatttgaaaatgtgcaattttgacctaacttactttgactgtattttttttactaatatacaaagataaataatatcat 2799737  T
Q  314 ataagatgtcgttagatt 331  Q
    ||| ||||||||||||||    
T  2799738 atatgatgtcgttagatt 2799755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 8627142 - 8627235
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataat 308  Q
    ||||||||||||||||||||| |||||| |||||| |||||||| ||| |||||||||||||||       | ||||| |||||||||||||||    
T  8627142 tccgtcccgcaatagatgacctatttgaaaatgtgcaattttgatctaacttactttgaccatatttttttactaatatacaaagataaataat 8627235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 331
Target Start/End: Complemental strand, 41042890 - 41042778
Alignment:
Q  219 tcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataag 318  Q
    |||||||||| || ||| |||||| ||| || |||||||| |||||||||||||||||||       | ||||| |||  ||||||||||| ||||||||    
T  41042890 tcccgcaataaataacctatttgaaaatttgcaattttgatctagcttactttgaccatatttttctactaatatacattgataaataatatcatataag 41042791  T
Q  319 atgtcgttagatt 331  Q
    |||||||||||||    
T  41042790 atgtcgttagatt 41042778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 2551693 - 2551568
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||| |||| |||| | |||||||||||||||| | |||||| |||||||||||| |||| ||| ||||||       | ||||| | ||||||||||    
T  2551693 attacttcctcagtcctgaaatagatgacccatttaaaaatgtgcaattttgacctaacttattttaaccatatttttctactaatatataaagataaat 2551594  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    ||||  ||||||||||| ||||||||    
T  2551593 aatattatataagatgttgttagatt 2551568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 39104344 - 39104220
Alignment:
Q  208 tactccctccgtcccgcaatagatg-acccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||| |||||||||| |||||||| ||| |||| | |||||||||||||||  ||  ||| ||||||||||       | ||||| |||||||||||||    
T  39104344 tactctctccgtcccgtaatagatggacctatttaaaaatgtgtaattttgatataatttaatttgaccatatttttctactaatatacaaagataaata 39104245  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||| ||||||||||    
T  39104244 atatcatataagatatcgttagatt 39104220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 331
Target Start/End: Original strand, 967203 - 967317
Alignment:
Q  219 tcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata--atagcatata 316  Q
    ||||||||||||| || ||||||| ||| || |||||||||||| |||||||| || |||       ||||||| ||||| |||||||  ||| ||||||    
T  967203 tcccgcaatagataactcatttgaaaatttgcaattttgacctaacttactttaactatatttttctattaatatacaaatataaataatatatcatata 967302  T
Q  317 agatgtcgttagatt 331  Q
    |||||||||||||||    
T  967303 agatgtcgttagatt 967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 2805814 - 2805921
Alignment:
Q  225 aatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata-nnnnnnnattaatagacaaagataaataatagcatataagatgtc 323  Q
    |||||||||||||||||| |||||| ||||||||||||  ||||||||||  ||        | ||||| |||||||||||||||| |||||| ||||||    
T  2805814 aatagatgacccatttgaaaatgtgcaattttgacctaatttactttgactgtattttttttactaatatacaaagataaataatatcatatatgatgtc 2805913  T
Q  324 gttagatt 331  Q
    ||||||||    
T  2805914 gttagatt 2805921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 19516608 - 19516690
Alignment:
Q  116 ttttaataaaaaataagtgggagtagacttgctaacgtactcattcannnnnnngtgtgggagtaagttaaca-ccccctaaa 197  Q
    ||||| |||||| ||||||||||||||||||||||| ||||| ||||       ||||||||||||||||||| |||||||||    
T  19516608 ttttagtaaaaactaagtgggagtagacttgctaacttactccttcatgtttttgtgtgggagtaagttaacagccccctaaa 19516690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 28142943 - 28143048
Alignment:
Q  223 gcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgt 322  Q
    ||||||||| | |||||||| |||||| |||||| | |||  ||||||||||||||       | ||||| |||||||||||||||| ||||||||||||    
T  28142943 gcaatagataatccatttgaaaatgtgcaattttaatctaatttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgt 28143042  T
Q  323 cgttag 328  Q
     |||||    
T  28143043 tgttag 28143048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 32110736 - 32110669
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgacc 275  Q
    |||||||||||| ||||||||||| | |||||||| |||||| |||||||| |||  |||||||||||    
T  32110736 tactccctccgttccgcaatagataatccatttgaaaatgtgcaattttgatctaatttactttgacc 32110669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 6734817 - 6734904
Alignment:
Q  244 aatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| ||| | |||| ||||||||||       | ||||| | |||||||||||||| |||||||||||||||||||||    
T  6734817 aatgtgtaattttaacccaacttaatttgaccataattttctactaatatataaagataaataatatcatataagatgtcgttagatt 6734904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 27674295 - 27674336
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgtta 327  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  27674295 attaatatacaaagataaataatatcatataagatgtcgtta 27674336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 14639737 - 14639656
Alignment:
Q  250 taattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| || ||||||||| ||       | ||||| |||||||||||||| | |||||||||||||||||||||    
T  14639737 taattttgacctaactaactttgaccgtatttttcaactaatatacaaagataaataacatcatataagatgtcgttagatt 14639656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 14139935 - 14140005
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    ||||||||| |||||||||||||||| | | |||| ||| || |||||||| |||| ||||||||| ||||    
T  14139935 tactccctctgtcccgcaatagatgatctaattgaaaatttgcaattttgatctagtttactttgatcata 14140005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 1918808 - 1918771
Alignment:
Q  294 acaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  1918808 acaaagataaataatatcatataagatgtctttagatt 1918771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 40365866 - 40365829
Alignment:
Q  294 acaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||| | |||||||||||||||||||||    
T  40365866 acaaagataaataacatcatataagatgtcgttagatt 40365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 46608210 - 46608336
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||| |||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||    
T  46608210 tattacttcctccgtcccgcaataaatgacctgtttgaaaatgtgaaattttgacctaacttactttgaccatatttttatactaatatacaaagataaa 46608309  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  46608310 taatatcatataagatgtcgttagatt 46608336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 214 - 331
Target Start/End: Complemental strand, 1613275 - 1613158
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcat 313  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||||||  ||||||||||||||       | ||||| |||||||||||||||| |||    
T  1613275 ctccgtcccgtaatagatgacctatttgaaaatgtgtaattttgacctaatttactttgaccatatttttctactaatatacaaagataaataatatcat 1613176  T
Q  314 ataagatgtcgttagatt 331  Q
    ||||||||||||||||||    
T  1613175 ataagatgtcgttagatt 1613158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 31152659 - 31152784
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||||||||||||| ||||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||    
T  31152659 attactccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaat 31152758  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  31152759 aatatcatataagatgtcgttagatt 31152784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 10384843 - 10384971
Alignment:
Q  203 tttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagata 302  Q
    |||| ||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||||||| ||||||       | ||||| |||||||||    
T  10384843 tttagtactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaaccatatttttctactaatatacaaagata 10384942  T
Q  303 aataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||||||||||||    
T  10384943 aataataacatataagatgtcgttagatt 10384971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 37667837 - 37667714
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||  ||||||||||||||       ||||||| ||||||||||||||    
T  37667837 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatttttctattaatatacaaagataaataa 37667738  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || || ||||||||||||||||||    
T  37667737 tatcaaataagatgtcgttagatt 37667714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 55631938 - 55631815
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||| ||||||||||       | ||||| ||||||||||||||    
T  55631938 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttttttactaatatacaaagataaataa 55631839  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  55631838 tatcatataagatgtcgttagatt 55631815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 31657423 - 31657296
Alignment:
Q  204 ttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataa 303  Q
    ||||||||||||||||||||||||| |||||| |||| | ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||    
T  31657423 ttattactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataa 31657324  T
Q  304 ataatagcatataagatgtcgttagatt 331  Q
    |||||| |||||||||| || |||||||    
T  31657323 ataatatcatataagatatcattagatt 31657296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 33394073 - 33394200
Alignment:
Q  204 ttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataa 303  Q
    |||||||| |||||||||| |||||| |||||||||| | |||||| |||||||||||| |||||||||||||||       | ||||| || |||||||    
T  33394073 ttattacttcctccgtcccacaataggtgacccatttaaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacgaagataa 33394172  T
Q  304 ataatagcatataagatgtcgttagatt 331  Q
    |||||  |||||||||||||||||||||    
T  33394173 ataatctcatataagatgtcgttagatt 33394200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 43447165 - 43447288
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||||| |||| |||| |  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  43447165 tactccctccgtcccgtaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 43447264  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  43447265 tatcatataagatgtcgttagatt 43447288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 47834202 - 47834084
Alignment:
Q  213 cctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagca 312  Q
    ||||||||||| ||| |||||| ||||||| |||||||||||||||| || |||||||||||||||       | ||||| |||||||||||||||| ||    
T  47834202 cctccgtcccggaatggatgacacatttgaaaatgtgtaattttgacataacttactttgaccatatttttctactaatatacaaagataaataatatca 47834103  T
Q  313 tataagatgtcgttagatt 331  Q
    ||||||||||| |||||||    
T  47834102 tataagatgtcattagatt 47834084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 42185272 - 42185397
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||||||||||||||||||||||| |||||||| ||| || ||||||||||||  ||| ||||||||||       | ||||| ||||||||||||    
T  42185272 attactccctccgtcccgcaatagatgatccatttgaaaatttgcaattttgacctaatttagtttgaccatatttttctactaatatacaaagataaat 42185371  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| ||||||| |||| ||||||||    
T  42185372 aatatcatataaaatgttgttagatt 42185397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 40411672 - 40411548
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata-nnnnnnnattaatagacaaagataaata 306  Q
    |||||||||||||||| |||| ||||||  ||||| |||||| |||||||||||| |||||||||||||||        | ||||| |||||||||||||    
T  40411672 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatattttttttactaatatacaaagataaata 40411573  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  40411572 atatcatataagatgtcgttagatt 40411548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 28988457 - 28988334
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| |||||||||||||||||| |||||| ||| |||||| ||||||||| ||||||||||||||       | ||||  ||| ||||||||||    
T  28988457 tactccctcagtcccgcaatagatgacctatttgaaaatttgtaatgttgacctagtttactttgaccatatttttctactaatgtacatagataaataa 28988358  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||| ||||||||    
T  28988357 tatcatataagatgttgttagatt 28988334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 39170963 - 39171081
Alignment:
Q  213 cctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagca 312  Q
    |||||||||||||||| ||||||  ||||| |||||| |||||||||||| |||| ||||||||||       | ||||| ||||||||||||||||  |    
T  39170963 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatataa 39171062  T
Q  313 tataagatgtcgttagatt 331  Q
    |||||||||||||||||||    
T  39171063 tataagatgtcgttagatt 39171081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 331
Target Start/End: Complemental strand, 53987850 - 53987720
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaaga 300  Q
    ||||||||||| |||| ||||  |||||||||| |||||| | |||||| ||| || ||||| |||||||||||||||       | ||||| |||||||    
T  53987850 tatttattacttcctctgtcctacaatagatgatccatttaaaaatgtgcaatattaacctaacttactttgaccatatttttctactaatatacaaaga 53987751  T
Q  301 taaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| |||||||||||||||||||||    
T  53987750 taaataatatcatataagatgtcgttagatt 53987720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 6520433 - 6520558
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||||| |||||||||||||| |||||| |||||| ||| || |||||||||||||||||||||||| |||       | ||||| ||| ||||||||    
T  6520433 attactccatccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgactatatttttctactaatatacatagataaat 6520532  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||| || |||||||    
T  6520533 aatatcatataagatatcattagatt 6520558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 3708253 - 3708376
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||| ||||| |||| |  ||||| |||||| |||||||||||| |||||||||| ||||       | ||||| ||||||||||||||    
T  3708253 tactccctccgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 3708352  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||| |||||||||||    
T  3708353 tatcatataagacgtcgttagatt 3708376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 28899134 - 28899011
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| |||||||||||||||||| |||||| ||| || ||||||||||||| ||||||||||||||       | ||||| ||| |||||||||     
T  28899134 tactccctctgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatatatttctactaatatacatagataaatat 28899035  T
Q  308 tagcatataagatgtcgttagatt 331  Q
       |||||||||||||||||||||    
T  28899034 attcatataagatgtcgttagatt 28899011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 43047387 - 43047510
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| ||||| |||||||||| |||||   ||||| |||||| |||||| ||||| |||||||||||||||       | ||||| ||||||||||||||    
T  43047387 tacttcctccatcccgcaataaatgacttgtttgaaaatgtgcaattttaacctaacttactttgaccatatttttctactaatatacaaagataaataa 43047486  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  43047487 tatcatataagatgtcgttagatt 43047510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 8525480 - 8525356
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||||||||  |||| ||||||  ||||| ||| || |||||||||||| |||||||||| ||||       | ||||| |||| ||||||||    
T  8525480 ttactccctccgtcccataataaatgacctgtttgaaaatatgcaattttgacctaacttactttgatcatatttttctactaatatacaaggataaata 8525381  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  8525380 atatcatataagatgtcgttagatt 8525356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 24334444 - 24334318
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||  |||||||||||||||||| |||||| ||| || ||||||||||||| ||||||||||||||       | ||||| ||| ||||||||||    
T  24334444 tactccctttgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatatatttctactaatatacatagataaataa 24334345  T
Q  308 ---tagcatataagatgtcgttagatt 331  Q
       || |||||||||||||||||||||    
T  24334344 tactatcatataagatgtcgttagatt 24334318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 329
Target Start/End: Original strand, 37164033 - 37164137
Alignment:
Q  225 aatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcg 324  Q
    |||||||||||||||||| ||| |  |||||||||||| ||||||||||| |||       | ||||| |||||||||||||||| ||||||||||||||    
T  37164033 aatagatgacccatttgaaaatatacaattttgacctaacttactttgactatatttttctactaatatacaaagataaataatatcatataagatgtcg 37164132  T
Q  325 ttaga 329  Q
    |||||    
T  37164133 ttaga 37164137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 48336489 - 48336426
Alignment:
Q  210 ctccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttga 273  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||    
T  48336489 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttga 48336426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 331
Target Start/End: Complemental strand, 1981429 - 1981321
Alignment:
Q  224 caatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnn-attaatagacaaagataaataatagcatataagatgt 322  Q
    ||||||| || |||||||| ||| ||||||||||| ||| |||||||||||||||        | ||||| |||||||||||||||| ||||||||||||    
T  1981429 caatagacgatccatttgaaaatttgtaattttgatctaacttactttgaccatattttttttactaatatacaaagataaataatatcatataagatgt 1981330  T
Q  323 cgttagatt 331  Q
    |||||||||    
T  1981329 cgttagatt 1981321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 39332898 - 39332770
Alignment:
Q  203 tttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagata 302  Q
    |||| ||||||||||||| ||||||| |||| |  ||||| |||||| |||||||| ||| |||||||||||||||       | ||||| |||||  ||    
T  39332898 tttactactccctccgtcacgcaataaatgatctgtttgaaaatgtgcaattttgaactaacttactttgaccatatttttctactaatatacaaaagta 39332799  T
Q  303 aataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||| ||||||||    
T  39332798 aataatatcatataagatgttgttagatt 39332770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 39376944 - 39376869
Alignment:
Q  199 tttatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgac 274  Q
    ||||| ||||||||||||||||||||||||||||||  | |||| ||| || ||||||||||||| ||||||||||    
T  39376944 tttatctattactccctccgtcccgcaatagatgacttagttgaaaatttgcaattttgacctagtttactttgac 39376869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 29821050 - 29821173
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| | ||||||| ||||||||| |||||||| |||||| |||||||| ||| |||||||||||||||       | ||||| |||||||||| |||    
T  29821050 tactcctttcgtcccgtaatagatgatccatttgaaaatgtgcaattttgatctaacttactttgaccatatttttctactaatatacaaagataagtaa 29821149  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    |  ||||| ||||||| |||||||    
T  29821150 tttcatattagatgtcattagatt 29821173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 37588595 - 37588472
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||||||| |||||||||||| ||||| | ||||| |||||||||  ||  ||||||||| ||||         ||||| ||||| |||||||    
T  37588595 ttactccctccgtccggcaatagatgacacatttaaaaatgtttaattttgatttaagttactttgatcatagttttctcctaatatacaaaaataaata 37588496  T
Q  307 atagcatataagatgtcgttagat 330  Q
    ||| ||||||||||||||||||||    
T  37588495 atatcatataagatgtcgttagat 37588472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 331
Target Start/End: Complemental strand, 23605972 - 23605842
Alignment:
Q  201 tatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaaga 300  Q
    |||||| ||||| |||| |||||||||| |||| | |||||| ||| |  ||||||||||||||||||||||| ||||       | ||| | ||| |||    
T  23605972 tatttaatactctctccatcccgcaataaatgatctatttgaaaatttacaattttgacctagcttactttgatcatatttttctactaacatacataga 23605873  T
Q  301 taaataatagcatataagatgtcgttagatt 331  Q
    ||||||||| |||||||||| ||||||||||    
T  23605872 taaataatatcatataagatatcgttagatt 23605842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 48380472 - 48380574
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||||||||||||||  |||||  ||||| |||||| | |||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  48380472 ttactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatttttctactaatatacaaagataaata 48380571  T
Q  307 ata 309  Q
    |||    
T  48380572 ata 48380574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 28914411 - 28914491
Alignment:
Q  251 aattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||| |||||||||||||||       | ||||| | |||||||||||||| |||||||||||||||||||||    
T  28914411 aattttgacctaacttactttgaccatatttttctactaatatataaagataaataatatcatataagatgtcgttagatt 28914491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 18881420 - 18881297
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||  |||||||||||| |||||| |||||| | | ||||| ||   ||||||||| |||       | ||||| ||||||||||||||    
T  18881420 tactccctccgtcctacaatagatgacctatttgaaaatgtgaactattgacttaatatactttgactatatttttctactaatatacaaagataaataa 18881321  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||||||| |||||||    
T  18881320 tatcatataagatgtcattagatt 18881297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 52818742 - 52818680
Alignment:
Q  214 ctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgacca 276  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| |||||  ||||||||||||    
T  52818742 ctccctcccgcaatagatgactcatttgaaaatgtgtaattttaacctaatttactttgacca 52818680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 39260432 - 39260475
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  39260432 taatatacaaagataaataatatcatataagatgtcgttagatt 39260475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 1377503 - 1377573
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    ||||||||  ||||||||||| | |||| |||||| ||| || |||||||||||| |||||||||||||||    
T  1377503 tactccctttgtcccgcaataaacgacctatttgaaaatttgcaattttgacctatcttactttgaccata 1377573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 4272068 - 4271954
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||| |||||| ||||||||||||||||||         ||||||||||| |||||||||||  ||       ||||||| | ||||||||||||    
T  4272068 tactccctctgtcccgtaatagatgacccatttga---------attttgacctaacttactttgactgtatttttctattaatatataaagataaataa 4271978  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||| ||||    
T  4271977 tatcatataagatgtcgtttgatt 4271954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 13848954 - 13848997
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  13848954 taatatacaaagataaataacatcatataagatgtcgttagatt 13848997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 24505591 - 24505634
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  24505591 taatatacaaagataaataacatcatataagatgtcgttagatt 24505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 50685008 - 50685043
Alignment:
Q  296 aaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||| |||||||||||||||||||||    
T  50685008 aaagataaataatatcatataagatgtcgttagatt 50685043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 48652561 - 48652595
Alignment:
Q  297 aagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| |||||||||||||||||||||    
T  48652561 aagataaataatatcatataagatgtcgttagatt 48652595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 28909817 - 28909780
Alignment:
Q  294 acaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  28909817 acaaagataaataatatcatataagacgtcgttagatt 28909780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 41555454 - 41555495
Alignment:
Q  200 ttatttattactccctccgtcccgcaatagatgacccatttg 241  Q
    |||||||||||||||||||||||||||||  ||||| |||||    
T  41555454 ttatttattactccctccgtcccgcaatacttgacctatttg 41555495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 54803043 - 54802998
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||| ||||| |||||||||| |||||||||||| ||||||||    
T  54803043 attaatatacaaaaataaataatatcatataagatgttgttagatt 54802998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 30464431 - 30464555
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||||||||||||||| |||||   ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  30464431 ttactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaata 30464530  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  30464531 atatcatataagatgtcgttagatt 30464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 20671256 - 20671379
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  20671256 tactccctccgtcgcgcaatagatgatcaatttgaaaatgtgtaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 20671355  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| | ||||||||    
T  20671356 tatcatataagatattgttagatt 20671379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 3466282 - 3466406
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||   ||       | ||||| |||||||||||||    
T  3466282 ttactccctccgtcccgcaatagatgacccatttgaaaatgcgcaattttgacctaacttactttgattttatttttctactaatatacaaagataaata 3466381  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| ||||||||||||| |||||||    
T  3466382 atatcatataagatgtctttagatt 3466406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 4960151 - 4960274
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||||||||| ||||||||| | |||||| ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||||||    
T  4960151 tactccttccgtcccgtaatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 4960250  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  4960251 tatcatataagatgtcgttagatt 4960274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 23437874 - 23437751
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||  || |||||||||||       | ||||| ||||||||||||||    
T  23437874 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttgctttgaccatatttttctactaatatacaaagataaataa 23437775  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  23437774 tatcatataagatgtcgttagatt 23437751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 44887776 - 44887653
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||| |||| | |||||| |||||| |||||||||||  |||| ||||||||||       | ||||| ||||||||||||||    
T  44887776 tactccctccgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgacttagtttgaccatatttttctactaatatacaaagataaataa 44887677  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  44887676 tatcatataagatgtcgttagatt 44887653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 8496949 - 8496824
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||| |||||||| | ||||| |||||||||||| |||||| |||||||||||| |||||||||||||||       |  |||| ||||||||||||    
T  8496949 attactctctccgtcctgtaatagttgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatttttctacgaatatacaaagataaat 8496850  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||| ||||||||||    
T  8496849 aatatcatataagatatcgttagatt 8496824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 25691659 - 25691535
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||| ||||| |||||||| |||||   ||||| |||||| |||||||||||| |||||||||||||||       | ||||| |||||||||||||    
T  25691659 ttactccatccgttccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaata 25691560  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  25691559 atatcatataagatgtcgttagatt 25691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 37094132 - 37094255
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||| |||||||||||||||| |||||| |||||| ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||||||    
T  37094132 tacttcctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 37094231  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| || |||||||    
T  37094232 tatcatataagatatcattagatt 37094255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 44947018 - 44947139
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| |||||||||||||||||| | |||||| ||||||||||||  |||||||||  |||       ||||||| || |||||||||||    
T  44947018 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttactttgattatatttttctattaatatactaagataaataa 44947116  T
Q  308 tagcatataagatgtcgttagat 330  Q
    || ||||||||||||||||||||    
T  44947117 tatcatataagatgtcgttagat 44947139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 14378749 - 14378624
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||||||||||||||||||||| ||||    ||||| |||||| |||||||||||| ||||||||||| |||       | ||||| | ||||||||||    
T  14378749 attactccctccgtcccgcaataaatgataggtttgaaaatgtgcaattttgacctaacttactttgactatatttttctactaatatataaagataaat 14378650  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||||||||    
T  14378649 aatatcatataagatgtcgttagatt 14378624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 761549 - 761673
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    |||||||||| ||||||||||| ||||||  ||||| |||||||||||||||||||  ||||||||||||||       | ||||| |||||  ||||||    
T  761549 ttactccctctgtcccgcaataaatgacctgtttgaaaatgtgtaattttgacctaatttactttgaccatatttttctactaatatacaaatttaaata 761648  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||| ||||||||    
T  761649 atatcatataagatgttgttagatt 761673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 331
Target Start/End: Complemental strand, 43184841 - 43184717
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||||||||| ||| |||||| ||||||  ||| | ||||||| ||||||||||| |||||||||||||||       | ||||| ||||| |||||||    
T  43184841 ttactccctccatcctgcaataaatgacctgtttaaaaatgtgttattttgacctaacttactttgaccatatttttctactaatatacaaaaataaata 43184742  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||||||||||||||    
T  43184741 atatcatataagatgtcgttagatt 43184717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 30653360 - 30653483
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||||||||| |||||||| || |||| | |||||| |||||| | ||| |||||||||||||||       | ||||| ||||||||||||||    
T  30653360 tactccatccgtcccgtaatagatgcccaatttaaaaatgtgcaattttaatctaacttactttgaccatatttttctactaatatacaaagataaataa 30653459  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  30653460 tatcatataagatgtcgttagatt 30653483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 44361921 - 44362044
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||  ||||||||||||||||| |||||| ||| || |||||||| |||| ||||||||||||||       | ||||| ||| ||||||||||    
T  44361921 tactccctcattcccgcaatagatgacctatttgaaaatttgcaattttgagctagtttactttgaccatatatttctactaatatacatagataaataa 44362020  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||| |||||||||||    
T  44362021 tatcatataagacgtcgttagatt 44362044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 25009142 - 25009267
Alignment:
Q  206 attactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    |||||| |||||||||| ||||| |||| |  ||||| |||||| ||||||||||||  ||||||||||||||       | ||||| ||||||||||||    
T  25009142 attacttcctccgtccctcaataaatgatctgtttgaaaatgtgcaattttgacctaatttactttgaccatatttttctactaatatacaaagataaat 25009241  T
Q  306 aatagcatataagatgtcgttagatt 331  Q
    |||| ||||||||||||| |||||||    
T  25009242 aatatcatataagatgtcattagatt 25009267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 327
Target Start/End: Original strand, 38842161 - 38842282
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataa-tgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaat 305  Q
    ||||| ||||||||||| |||| ||||||  ||||| || ||||||||||||||||| |||||||||| ||||       | ||||| ||||||||||||    
T  38842161 ttacttcctccgtcccgtaataaatgacctgtttgaaaaatgtgtaattttgacctaacttactttgatcatatttttctactaatatacaaagataaat 38842260  T
Q  306 aatagcatataagatgtcgtta 327  Q
    |||| |||||||||||||||||    
T  38842261 aatatcatataagatgtcgtta 38842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44717282 - 44717366
Alignment:
Q  194 taaattttatttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    |||| |||| ||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| |||||||||| ||||    
T  44717282 taaaatttacttactactccctccgtcccgcaatggatgatccatttgaaaatgtgtaattttgaactaacttactttgatcata 44717366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 29917981 - 29917866
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcata 314  Q
    ||||||| ||||||||||| |||||| | ||||||||||||||||||| |||| ||||||||||       | ||||| |||||||||||||||| ||||    
T  29917981 tccgtcctgcaatagatgatccatttaa-aatgtgtaattttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcata 29917883  T
Q  315 taagatgtcgttagatt 331  Q
    |||||| | ||||||||    
T  29917882 taagatattgttagatt 29917866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 4327180 - 4327057
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||| |||||||||||| |||||   ||||| |||||| |||||||| ||| |||||||||| ||||       | ||||| ||||||||||||||    
T  4327180 tactccctgcgtcccgcaataaatgacttgtttgaaaatgtgcaattttgatctaacttactttgatcatatttttctactaatatacaaagataaataa 4327081  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||||||| |||||||    
T  4327080 tatcatataagatgtctttagatt 4327057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 5777615 - 5777492
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||| ||| ||| |||||| ||||||  ||||| ||||||||||||||| ||| |||| ||| ||||||       | ||||| ||||||||||||||    
T  5777615 tactccatccatcctgcaataaatgacctgtttgaaaatgtgtaattttgatctatcttattttaaccatatttttctactaatatacaaagataaataa 5777516  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  5777515 tatcatataagatgtcgttagatt 5777492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 8059086 - 8058962
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||| |||||| |||||||||||| | |||||| |||||||||||||  | || |||| ||||||||||       | ||||| |||||||||||    
T  8059086 tattactccttccgtcacgcaatagatgatcaatttgaaaatgtgtaatttt--cttaacttattttgaccatatttttttactaatatacaaagataaa 8058989  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| ||||||||||||| |||||||    
T  8058988 taatatcatataagatgtcattagatt 8058962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 11756775 - 11756901
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnatta--atagacaaagataaa 304  Q
    |||||||||| || ||||||||||||||  |||||| ||| || |||||||||||| |||||||||||||||       | ||  ||| ||| |||||||    
T  11756775 ttactccctctgttccgcaatagatgacttatttgaaaatttgcaattttgacctaacttactttgaccatatttttcaactaatatatacatagataaa 11756874  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  11756875 taatatcatataagatgtcgttagatt 11756901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 28583364 - 28583241
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||  ||||||||| ||||       | ||||   ||||||||||||     
T  28583364 tactccctccgtcccgcaatagatgacctttttgaaaatgtgcaattttgacctaatttactttgagcatatttttctactaatgttcaaagataaatag 28583265  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||| |||||||||||||||    
T  28583264 tatcatatgagatgtcgttagatt 28583241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 331
Target Start/End: Original strand, 44039833 - 44039948
Alignment:
Q  216 ccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatat 315  Q
    |||||| |||||| |||| |||||||| |||||| |||||||| || ||||| ||||| ||||       | ||||| |||||||||||||||| |||||    
T  44039833 ccgtcctgcaataaatgatccatttgaaaatgtgcaattttgatctggcttagtttgatcatatttttctactaatatacaaagataaataatatcatat 44039932  T
Q  316 aagatgtcgttagatt 331  Q
    ||||||||||||||||    
T  44039933 aagatgtcgttagatt 44039948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 27301859 - 27301985
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||||||||||  |||||||||||| ||||||| ||| |  ||||||||  ||  |||||||||| |||       | ||||| |||||||||||    
T  27301859 tattactccctccgtcttgcaatagatgactcatttgaaaatattcaattttgatataatttactttgacaatatttttctactaatatacaaagataaa 27301958  T
Q  305 taatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||||||||    
T  27301959 taatatcatataagatgtcgttagatt 27301985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 40645609 - 40645710
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||||||||||||| ||||||||| ||| |  |||||||||||| |||||||||| ||||       | ||||| ||||||||||||||    
T  40645609 tactccctccgtcccgcaatagatggcccatttgaaaattttcaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataa 40645708  T
Q  308 ta 309  Q
    ||    
T  40645709 ta 40645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 23547063 - 23547191
Alignment:
Q  203 tttattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagata 302  Q
    ||||||||||||||||||||  |||| ||||||  ||| | | ||||||||||||| ||| ||||||||||  |||       | ||||| |||||||||    
T  23547063 tttattactccctccgtcccataataaatgacctgtttaaaattgtgtaattttgatctaacttactttgataatatttttctactaatatacaaagata 23547162  T
Q  303 aataatagcatataagatgtcgttagatt 331  Q
    |||||||  ||||||||||||||||||||    
T  23547163 aataatattatataagatgtcgttagatt 23547191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 43049323 - 43049207
Alignment:
Q  215 tccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcata 314  Q
    |||||||||||||| |||| | |||||| ||| ||||||||||| |||||| ||||||||||||       | ||||| ||| |||||||||||| ||||    
T  43049323 tccgtcccgcaataaatgatctatttgaaaatttgtaattttgatctagctaactttgaccatatttttctactaatatacatagataaataatatcata 43049224  T
Q  315 taagatgtcgttagatt 331  Q
    |||||| || |||||||    
T  43049223 taagatatcattagatt 43049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 18419027 - 18419121
Alignment:
Q  237 atttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||| ||| |||||||||||||||||||||||||||||||       | ||||| ||| ||||| |||||| |||||||||| ||||||||||    
T  18419027 atttgaaaatttgtaattttgacctagcttactttgaccatatttttctactaatatacatagatagataatatcatataagatatcgttagatt 18419121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 21132959 - 21132866
Alignment:
Q  238 tttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||| ||||||||| || |||||||||||||||       | ||||| ||||||| |||||||| |||||||||||||||||||||    
T  21132959 tttgaaaatgtgcaattttgacttaacttactttgaccatatttttctactaatatacaaagaaaaataatatcatataagatgtcgttagatt 21132866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 331
Target Start/End: Original strand, 17523804 - 17523928
Alignment:
Q  207 ttactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaata 306  Q
    ||||| ||||| |||  ||||||||||||||||||| |||||| | |||| ||||| |||||||||| ||||         ||||| |||||||||||||    
T  17523804 ttacttcctccctcctacaatagatgacccatttgaaaatgtgcagttttaacctaacttactttgatcatatttttctgctaatatacaaagataaata 17523903  T
Q  307 atagcatataagatgtcgttagatt 331  Q
    ||| |||||||||| ||||| ||||    
T  17523904 atatcatataagatatcgtttgatt 17523928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 8123652 - 8123714
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagctta 267  Q
    ||||||||||||||| | ||||||||||| |||||| | ||||||||||||||||||| ||||    
T  8123652 tattactccctccgttctgcaatagatgatccatttaaaaatgtgtaattttgacctaactta 8123714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 331
Target Start/End: Complemental strand, 29616387 - 29616264
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||| ||  ||||| || |||||||||| ||| |  |||||||| ||| |||||||||| ||||       | ||||| ||||||||||||||    
T  29616387 tactccctccgacctacaataaataacccatttgaaaatattaaattttgatctaacttactttgatcatatttgtctactaatatacaaagataaataa 29616288  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || ||||||||||||| |||||||    
T  29616287 tatcatataagatgtctttagatt 29616264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 2026569 - 2026691
Alignment:
Q  205 tattactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaa 304  Q
    ||||||||||||| |   |||| ||||||  ||||||| ||||| ||||||||||||| ||||||||||| ||        | ||||| |||||||||||    
T  2026569 tattactccctccatattgcaacagatgaatcatttgaaaatgtttaattttgacctaacttactttgactatgttgttttactaatatacaaagataaa 2026668  T
Q  305 taatagcatataagatgtcgtta 327  Q
    |||||  ||||||||||||||||    
T  2026669 taatattatataagatgtcgtta 2026691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 44871411 - 44871454
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  44871411 taatatacaaagataaataatatcatataagatgtcgttagatt 44871454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 8123719 - 8123761
Alignment:
Q  289 aatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  8123719 aatatacaaagataaataatatcatataagatgtcgttagatt 8123761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 14584268 - 14584198
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccata 278  Q
    |||||||||||||||  ||||||||| | |||||| ||| | ||||||||| |||||||||||||| ||||    
T  14584268 tactccctccgtcccataatagatgatctatttgaaaatttataattttgatctagcttactttgatcata 14584198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 21133046 - 21133009
Alignment:
Q  294 acaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21133046 acaaagataaataatatcatataagatgtcgttagatt 21133009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 25118803 - 25118909
Alignment:
Q  225 aatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcg 324  Q
    ||||||||||  |||||| |||||||| |||||||||| | || ||||||| |        | ||||| |||||||||||||||| ||||||||||||||    
T  25118803 aatagatgacttatttgaaaatgtgtacttttgacctaacatattttgaccttctttttctactaatatacaaagataaataatatcatataagatgtcg 25118902  T
Q  325 ttagatt 331  Q
    || ||||    
T  25118903 ttggatt 25118909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 29708603 - 29708684
Alignment:
Q  250 taattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||||||||| || ||||||||| ||       | ||||| |||||||||||||| | |||||||||||||||||||||    
T  29708603 taattttgacctaactgactttgaccgtatttttcaactaatatacaaagataaataacatcatataagatgtcgttagatt 29708684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 7431300 - 7431257
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||    
T  7431300 taatatacaaagataaataatatcatataagatgttgttagatt 7431257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 14511920 - 14511963
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  14511920 taatatacaaagataaataacatcatataagatgtcgttagatt 14511963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 15870255 - 15870298
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||    
T  15870255 taatatacaaaaataaataatatcatataagatgtcgttagatt 15870298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 32909135 - 32909178
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  32909135 taatatacaaagataaataacatcatataagatgtcgttagatt 32909178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 13888611 - 13888573
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgtt 326  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  13888611 taatatacaaagataaataatatcatataagatgtcgtt 13888573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 35584157 - 35584112
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||||||| |||||||||| | ||||||||    
T  35584157 attaatatacaaagataaataatatcatataagatattgttagatt 35584112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 42786081 - 42786036
Alignment:
Q  286 attaatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||||| |||||||||||||||| |||||||||||| ||| ||||    
T  42786081 attaatatacaaagataaataatatcatataagatgttgttggatt 42786036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 183966 - 184089
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||| ||||||| || |||  ||||| |||||| |||||||||||| |||||||||||||||       | ||||| ||||||||||||||    
T  183966 tactccctccgtctcgcaataaataacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataa 184065  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||||||||||||||    
T  184066 tatcatataagatgtcgttagatt 184089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 2996 - 3117
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    |||||||||||||| |||||||||||||||||| | |||||| ||||||||||||  |||||||||  |||       ||||||| || |||||||||||    
T  2996 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttactttgattatatttttctattaatatactaagataaataa 3094  T
Q  308 tagcatataagatgtcgttagat 330  Q
    || ||||||||||||||||||||    
T  3095 tatcatataagatgtcgttagat 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 24011 - 23948
Alignment:
Q  210 ctccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttga 273  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||    
T  24011 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttga 23948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 13104 - 13227
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||||||||||||| ||||| ||||||  ||| | ||| || ||||||||||||||||||||||||||||       | ||||| ||| ||||||||||    
T  13104 tactccctccgtcccacaataaatgacctgtttaaaaatttgcaattttgacctagcttactttgaccatatttttctactaatatacatagataaataa 13203  T
Q  308 tagcatataagatgtcgttagatt 331  Q
    || |||||||||| | ||||||||    
T  13204 tatcatataagatattgttagatt 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 1520 - 1401
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||| |||| ||||| |||||||||   |||| | |||||||||||||||| || |||||||||||||||       | ||||| ||||| ||||||||    
T  1520 tactctctccatcccgtaatagatgatttatttaaaaatgtgtaattttgacataacttactttgaccatatttttctactaatatacaaaaataaataa 1421  T
Q  308 tagcatataagatgtcgtta 327  Q
    || ||||||| |||||||||    
T  1420 tatcatataatatgtcgtta 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 793 - 912
Alignment:
Q  208 tactccctccgtcccgcaatagatgacccatttgataatgtgtaattttgacctagcttactttgaccatannnnnnnattaatagacaaagataaataa 307  Q
    ||||| |||| ||||| |||||||||   |||| | |||||||||||||||| || |||||||||||||||       | ||||| ||||| ||||||||    
T  793 tactctctccatcccgtaatagatgatttatttaaaaatgtgtaattttgacataacttactttgaccatatttttctactaatatacaaaaataaataa 892  T
Q  308 tagcatataagatgtcgtta 327  Q
    || ||||||| |||||||||    
T  893 tatcatataatatgtcgtta 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 9210 - 9247
Alignment:
Q  294 acaaagataaataatagcatataagatgtcgttagatt 331  Q
    |||||||||||||||| |||||||||||||||||||||    
T  9210 acaaagataaataatatcatataagatgtcgttagatt 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 229 - 186
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  229 taatatacaaagataaataacatcatataagatgtcgttagatt 186  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 19719 - 19676
Alignment:
Q  288 taatagacaaagataaataatagcatataagatgtcgttagatt 331  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  19719 taatatacaaagataaataacatcatataagatgtcgttagatt 19676  T

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