View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19756_low_22 (Length: 317)
Name: NF19756_low_22
Description: NF19756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19756_low_22 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 305
Target Start/End: Complemental strand, 41367324 - 41367037
Alignment:
| Q |
18 |
ctatgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctatt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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|
| T |
41367324 |
ctatgttgggtaaggcaaatgcaatacccagacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaattcggctatt |
41367225 |
T |
|
| Q |
118 |
aagaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggata |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41367224 |
aagaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggata |
41367125 |
T |
|
| Q |
218 |
tcatatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41367124 |
tcatatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
41367037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 41325231 - 41324993
Alignment:
| Q |
22 |
gttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaaga |
121 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |
|
|
| T |
41325231 |
gttgggtaaggcaaatgcaattccgggacacatccttcttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaattggactattaaca |
41325132 |
T |
|
| Q |
122 |
aatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcat |
221 |
Q |
| |
|
|| |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
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|
| T |
41325131 |
aacctctcaggtttaaaactttcagcatcaacccaataccttggatctcttccaatagcccaagcattaaccatgacccttgtcttagctgggatttcat |
41325032 |
T |
|
| Q |
222 |
atctatttatttggcatggcttcgtactttctcttggaa |
260 |
Q |
| |
|
| | ||| ||||||||| || | ||||||||||||||| |
|
|
| T |
41325031 |
acccattgatttggcatctctccctactttctcttggaa |
41324993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 41333143 - 41332861
Alignment:
| Q |
20 |
atgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaa |
119 |
Q |
| |
|
||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||| |||||||| |
|
|
| T |
41333143 |
atgtttggtagggcaaatgcaattccgggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaattcaattgtgctattaa |
41333044 |
T |
|
| Q |
120 |
gaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatc |
219 |
Q |
| |
|
||| |||||||| |||||||||| || |||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||| || |
|
|
| T |
41333043 |
caaacctctcaggtttaaaactctcagcttcaacccaataccttgaatctcttccaatagcccaagcattaaccattacccttgtcttagctgggatttc |
41332944 |
T |
|
| Q |
220 |
atatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttga |
302 |
Q |
| |
|
||| | ||| ||||||||||||||| |||||||||||||||| || |||||| | ||||| ||||||| ||||||||||| |
|
|
| T |
41332943 |
atacccattaatttggcatggcttcatactttctcttggaattaacaatggtgcaacgggatgtaacctcaatgtttctttga |
41332861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 50 - 303
Target Start/End: Complemental strand, 41287305 - 41287052
Alignment:
| Q |
50 |
cacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaagaaatctctcaggcttaaaactcttggcat |
149 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||| ||| ||||| || || ||| ||| || | |
|
|
| T |
41287305 |
cacatcctccttccagcaccaaatggtatgtattcgaagtctgtgccattgaaatcaattggactattaacaaacctctcgggtttgaaattctcagctt |
41287206 |
T |
|
| Q |
150 |
caacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtact |
249 |
Q |
| |
|
| |||||||| || |||||||||||||| ||||||||||| |||| ||||| ||||| || ||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
41287205 |
cgacccaatatcttggatctcttccaattgcccaagcattgacaagaaccctagtcttggccgggatatcatatccattaatttggcatggcttcatact |
41287106 |
T |
|
| Q |
250 |
ttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgat |
303 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
41287105 |
ttctcttggaatcaacaatggtatagcaggatgcaacctcattgtttctttgat |
41287052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 23 - 305
Target Start/End: Complemental strand, 41329207 - 41328925
Alignment:
| Q |
23 |
ttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaagaa |
122 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||| | ||||||| || |
|
|
| T |
41329207 |
ttgggtatggcaaatgaaatacctggacacatccttcttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattggactattaacaa |
41329108 |
T |
|
| Q |
123 |
atctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcata |
222 |
Q |
| |
|
| |||||||| |||||||||| || |||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |
|
|
| T |
41329107 |
acctctcaggtttaaaactctcagcttcaacccaataccttgaatctcttccaatagcccaagcattaaccattacccttgtcttagctgggatttcata |
41329008 |
T |
|
| Q |
223 |
tctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
305 |
Q |
| |
|
| ||| ||||||||| || | ||||||||||||||| || |||||| | ||||||||||||| |||||||||||||| |
|
|
| T |
41329007 |
cccattgatttggcatctctccctactttctcttggaactaacaatggtgcaacgggatgcaacctcaatgtttctttgatga |
41328925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 305
Target Start/End: Complemental strand, 41317166 - 41316884
Alignment:
| Q |
23 |
ttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaagaa |
122 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||| || |
|
|
| T |
41317166 |
ttgggcaaggcaaatgcaatacctggacacatcctccttccagcaccaaatggtatgaattcgaagtccgtgcctttgaaatcaattgggctattaacaa |
41317067 |
T |
|
| Q |
123 |
atctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcata |
222 |
Q |
| |
|
| |||||||| |||||||||| || |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||||| || ||||| |
|
|
| T |
41317066 |
acctctcaggtttaaaactctcagcttcaacccaataccttggatctcttccaatagcccaagcattgacagcaacccttgtcttggctggaatctcata |
41316967 |
T |
|
| Q |
223 |
tctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
305 |
Q |
| |
|
| ||| ||||||||| || | ||||||||||||||| || ||||| | ||||| |||||||| |||||||||||||| |
|
|
| T |
41316966 |
accattgatttggcatctctccctactttctcttggaactaacaatggagcaacaggatacaacctcaatgtttctttgatga |
41316884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 305
Target Start/End: Complemental strand, 41311374 - 41311089
Alignment:
| Q |
20 |
atgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaa |
119 |
Q |
| |
|
||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
41311374 |
atgtttggtagggcaaatgcaattccgggacacatcctccttccagcaccaaatggtatgtattcaaagtccgtgcctttgaattcaattgtgctattaa |
41311275 |
T |
|
| Q |
120 |
gaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatc |
219 |
Q |
| |
|
||| |||||||| ||||| |||| || |||||||||||||| |||||||||||||||||||||||| ||| || ||| ||||||||| |||||| || |
|
|
| T |
41311274 |
caaacctctcaggtttaaatctctcagcttcaacccaataccttggatctcttccaatagcccaagcaataataacgactcttgtcttaattgggatctc |
41311175 |
T |
|
| Q |
220 |
atatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
305 |
Q |
| |
|
|| ||||| ||||||||| || | ||||||||||||||| || |||||| | ||||||||||||| |||||||||||||| |
|
|
| T |
41311174 |
atgcctattaatttggcatctctccctactttctcttggaactaacaatggtgcaactggatgcaacctcagtgtttctttgatga |
41311089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 41305473 - 41305279
Alignment:
| Q |
28 |
taaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaagaaatctc |
127 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
41305473 |
taaggcaaatgcaatgcccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaattgagctattaacaaacctc |
41305374 |
T |
|
| Q |
128 |
tcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcata |
222 |
Q |
| |
|
|| || |||||||||| || |||||||||||| | |||||||||||||| ||||||||||| ||||| ||||| ||||||||||| |||||||| |
|
|
| T |
41305373 |
tcgggtttaaaactctcagcttcaacccaatactttggatctcttccaatcgcccaagcattgacaataaccctagtcttagctggaatatcata |
41305279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 23 - 305
Target Start/End: Complemental strand, 41337947 - 41337665
Alignment:
| Q |
23 |
ttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaagaa |
122 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
41337947 |
ttgggcaaggcaaatgcaatacctggacacatccttcttccagcaccaaatggtattaattcaaagtctgtgcctttgaaatcaattgagctattaacaa |
41337848 |
T |
|
| Q |
123 |
atctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcata |
222 |
Q |
| |
|
| |||||||| |||||||||| || |||||||||||| | |||||||||||||| |||||| |||| ||| |||||||||||||||||||| ||||| |
|
|
| T |
41337847 |
acctctcaggtttaaaactctcagcttcaacccaatactttggatctcttccaattgcccaaacattgacagcaacccttgtcttagctgggatctcata |
41337748 |
T |
|
| Q |
223 |
tctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
305 |
Q |
| |
|
| ||| |||| ||| || ||||||||||||||| ||| || |||| || |||||| | ||| | |||||||||||||| |
|
|
| T |
41337747 |
cccattgatttcacatctctctctactttctcttggaaccaacaaaggtacagtaggatgtagcctaaatgtttctttgatga |
41337665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 31177667 - 31177950
Alignment:
| Q |
20 |
atgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaa |
119 |
Q |
| |
|
||||||| |||| ||||||| || || |||||||| || ||||||||||| || |||||||| ||||||| ||| ||||||||||||||| |||||||| |
|
|
| T |
31177667 |
atgttggataagccaaatgccatgcctggacacattcttcttccagcaccgaacggtatgtactcaaagtttgtacctttgaaatcaattgtgctattaa |
31177766 |
T |
|
| Q |
120 |
gaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatc |
219 |
Q |
| |
|
||| ||||| || |||||||||| || || |||||||||| |||||||||||| |||||| |||| | | || ||||| ||||||||||| || |
|
|
| T |
31177767 |
caaacctctcgggtttaaaactctcagcttctgcccaatacctttcatctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttc |
31177866 |
T |
|
| Q |
220 |
atatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgat |
303 |
Q |
| |
|
||| | ||| ||||||||| || ||||||||||||||||||| || |||| ||||||||||||||| | |||||||||||| |
|
|
| T |
31177867 |
atacccattgatttggcatctctctctactttctcttggaatcaacaaaggtaaagaaggatgcaaccttaatgtttctttgat |
31177950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 31187730 - 31188013
Alignment:
| Q |
20 |
atgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaa |
119 |
Q |
| |
|
||||||| |||| ||||||| || || |||||||| || ||||||||||| || |||||||||||||| | ||||||||||||||||||| |||||| | |
|
|
| T |
31187730 |
atgttggataagccaaatgccatgcctggacacattcttcttccagcaccgaacggtatgtattcaaaatttgtgcctttgaaatcaattgtgctattga |
31187829 |
T |
|
| Q |
120 |
gaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatc |
219 |
Q |
| |
|
|||| |||||||| |||||||||| || || |||||||||| |||||||||||| |||||| |||| | | || ||||| ||||||||||| || |
|
|
| T |
31187830 |
gaaacctctcaggtttaaaactctcagcttctgcccaatacctttcatctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttc |
31187929 |
T |
|
| Q |
220 |
atatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgat |
303 |
Q |
| |
|
||| | ||| ||||||||| || ||||||||||||||| ||| || || | ||||||||| | ||||| ||||||| |||| |
|
|
| T |
31187930 |
atacccattgatttggcatctctctctactttctcttggaaccaacaaaggcacagaaggatgtagcctcaatgtttctctgat |
31188013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 31226048 - 31225770
Alignment:
| Q |
20 |
atgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaa |
119 |
Q |
| |
|
||||||| |||| ||||||| || || |||||||| || ||||||||||| || |||||||||||||| | ||||||||||||||||||| |||||| | |
|
|
| T |
31226048 |
atgttggataagccaaatgccatgcctggacacattcttcttccagcaccgaacggtatgtattcaaaatttgtgcctttgaaatcaattgtgctattga |
31225949 |
T |
|
| Q |
120 |
gaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatc |
219 |
Q |
| |
|
|||| |||||||| |||||||||| || || |||||||||| |||||||||||| |||||| |||| | | || ||||| ||||||||||| || |
|
|
| T |
31225948 |
gaaacctctcaggtttaaaactctcagcttctgcccaatacctttcatctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttc |
31225849 |
T |
|
| Q |
220 |
atatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttct |
298 |
Q |
| |
|
||| | ||| ||||||||| || ||||||||||||||| ||| || ||| ||| ||||| || |||| ||||||| |
|
|
| T |
31225848 |
atacccattgatttggcatctctctctactttctcttggaaccaacaaaggtgcagatggatgtaatctcaatgtttct |
31225770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 41369980 - 41369921
Alignment:
| Q |
47 |
ggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatca |
106 |
Q |
| |
|
|||||||||||||| || ||| ||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
41369980 |
ggacacatcctcctccctgcatcaaatggtatgtattcaaagtctatacctttgaaatca |
41369921 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 20 - 305
Target Start/End: Original strand, 17248547 - 17248832
Alignment:
| Q |
20 |
atgttgggtaaggcaaatgcaatacccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaatttggctattaa |
119 |
Q |
| |
|
|||||||||| | |||||||||| |||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||||||| |
|
|
| T |
17248547 |
atgttgggtatgccaaatgcaatgcccggacaaatcctccttccagcaccaaatggtatgtattcgaaattcatgcctttgaaatcaattgggctattaa |
17248646 |
T |
|
| Q |
120 |
gaaatctctcaggcttaaaactcttggcatcaacccaatacctcggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatc |
219 |
Q |
| |
|
||| || ||||| || ||||||| || |||||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
17248647 |
aaaacctttcaggtttgaaactctcagcttcaacccaatacctttgatctcttccaattgcccaaacattaacagcaacccttgtcttagctggaatatc |
17248746 |
T |
|
| Q |
220 |
atatctatttatttggcatggcttcgtactttctcttggaatcaataatggtatagaaggatgcaacctcattgtttctttgatga |
305 |
Q |
| |
|
||| | || ||| | ||| | | |||||| ||| |||||||| ||||||| | |||||||| ||||| |||||||||||||| |
|
|
| T |
17248747 |
atacccgttgattcgacatttttccctactttgtctaggaatcaacaatggtacaataggatgcagcctcagtgtttctttgatga |
17248832 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 22946389 - 22946452
Alignment:
| Q |
44 |
cccggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaa |
107 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| ||||| ||||| | ||| ||||||||||||| |
|
|
| T |
22946389 |
cccggacaaattctccttccggcaccaaatggaatgtactcaaaatttgttcctttgaaatcaa |
22946452 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 22855276 - 22855321
Alignment:
| Q |
33 |
caaatgcaatacccggacacatcctccttccagcaccaaatggtat |
78 |
Q |
| |
|
||||||| || |||||||||||||| || ||||||||||||||||| |
|
|
| T |
22855276 |
caaatgcgatgcccggacacatccttctcccagcaccaaatggtat |
22855321 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 22986265 - 22986326
Alignment:
| Q |
47 |
ggacacatcctccttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaat |
108 |
Q |
| |
|
||||| || |||||||||||||||||||| ||||| ||||| | || |||||||||||||| |
|
|
| T |
22986265 |
ggacaaattctccttccagcaccaaatggaatgtactcaaaattagttcctttgaaatcaat |
22986326 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 22971951 - 22971999
Alignment:
| Q |
59 |
cttccagcaccaaatggtatgtattcaaagtctgtgcctttgaaatcaa |
107 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | ||| ||||||||||||| |
|
|
| T |
22971951 |
cttccagcaccaaatggaatgtactcaaaatttgttcctttgaaatcaa |
22971999 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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