View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19756_low_26 (Length: 287)

Name: NF19756_low_26
Description: NF19756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19756_low_26
NF19756_low_26
[»] chr7 (44 HSPs)
chr7 (1-287)||(9136300-9136586)
chr7 (4-111)||(48448661-48448768)
chr7 (4-122)||(47713235-47713353)
chr7 (4-105)||(31496467-31496566)
chr7 (1-122)||(35693633-35693754)
chr7 (4-124)||(29247770-29247890)
chr7 (4-112)||(41007770-41007878)
chr7 (4-100)||(46242303-46242399)
chr7 (4-95)||(9173166-9173257)
chr7 (4-106)||(19817478-19817580)
chr7 (4-109)||(38441956-38442061)
chr7 (4-106)||(36404745-36404847)
chr7 (4-95)||(40818525-40818618)
chr7 (18-111)||(3123960-3124053)
chr7 (4-121)||(18756732-18756848)
chr7 (4-129)||(32972131-32972256)
chr7 (1-122)||(38069191-38069312)
chr7 (4-122)||(16806949-16807067)
chr7 (4-122)||(36820019-36820137)
chr7 (4-66)||(38850845-38850907)
chr7 (4-112)||(32345596-32345704)
chr7 (4-91)||(4620208-4620294)
chr7 (1-72)||(19327455-19327526)
chr7 (1-72)||(25273870-25273941)
chr7 (4-112)||(5842260-5842369)
chr7 (4-112)||(33376918-33377025)
chr7 (4-111)||(41844912-41845020)
chr7 (30-122)||(25571495-25571587)
chr7 (4-112)||(38259623-38259731)
chr7 (4-71)||(27621149-27621216)
chr7 (1-72)||(47080757-47080828)
chr7 (47-112)||(37099689-37099754)
chr7 (1-122)||(38353401-38353522)
chr7 (4-72)||(30462074-30462142)
chr7 (1-109)||(32222690-32222800)
chr7 (37-122)||(26651051-26651136)
chr7 (5-81)||(38198522-38198598)
chr7 (1-45)||(48796310-48796354)
chr7 (5-64)||(14543645-14543703)
chr7 (4-71)||(27248699-27248766)
chr7 (31-122)||(28016581-28016671)
chr7 (52-113)||(39174005-39174066)
chr7 (4-45)||(40232071-40232112)
chr7 (4-72)||(7312951-7313019)
[»] chr2 (49 HSPs)
chr2 (4-124)||(25627166-25627286)
chr2 (4-112)||(7601209-7601317)
chr2 (4-104)||(44022411-44022511)
chr2 (4-106)||(26436505-26436607)
chr2 (4-124)||(15177512-15177632)
chr2 (4-107)||(18504615-18504718)
chr2 (4-111)||(43328615-43328721)
chr2 (4-122)||(41575705-41575823)
chr2 (4-122)||(16125885-16126002)
chr2 (4-122)||(16333623-16333740)
chr2 (4-122)||(37317019-37317137)
chr2 (27-112)||(2831874-2831959)
chr2 (8-95)||(11383874-11383961)
chr2 (4-122)||(6729905-6730023)
chr2 (4-122)||(10333380-10333498)
chr2 (4-122)||(20682785-20682903)
chr2 (4-122)||(41319726-41319844)
chr2 (4-122)||(41436975-41437093)
chr2 (1-109)||(4137549-4137657)
chr2 (6-122)||(40471881-40471997)
chr2 (4-122)||(7724412-7724531)
chr2 (4-111)||(16127594-16127700)
chr2 (4-95)||(45036506-45036597)
chr2 (4-122)||(5096391-5096509)
chr2 (4-110)||(22718357-22718463)
chr2 (4-122)||(31603219-31603336)
chr2 (4-122)||(38963938-38964056)
chr2 (4-122)||(42754157-42754275)
chr2 (4-72)||(1749024-1749092)
chr2 (4-72)||(12209132-12209200)
chr2 (4-112)||(16646389-16646497)
chr2 (4-122)||(11277677-11277795)
chr2 (1-95)||(33046064-33046158)
chr2 (4-65)||(37987795-37987856)
chr2 (4-112)||(8373577-8373685)
chr2 (4-95)||(8896414-8896505)
chr2 (1-72)||(45001736-45001807)
chr2 (1-64)||(8924599-8924662)
chr2 (8-72)||(6075272-6075336)
chr2 (1-72)||(41465218-41465289)
chr2 (5-71)||(19637897-19637963)
chr2 (5-71)||(19836490-19836556)
chr2 (1-111)||(31644147-31644255)
chr2 (1-62)||(38934893-38934953)
chr2 (37-93)||(9273793-9273849)
chr2 (4-95)||(2543979-2544070)
chr2 (1-95)||(15770911-15771005)
chr2 (1-95)||(25762334-25762428)
chr2 (4-72)||(24853392-24853458)
[»] chr5 (58 HSPs)
chr5 (7-106)||(39104098-39104197)
chr5 (4-122)||(26801904-26802022)
chr5 (4-122)||(26809454-26809572)
chr5 (4-122)||(27674360-27674478)
chr5 (4-95)||(1918660-1918751)
chr5 (4-122)||(26824481-26824599)
chr5 (4-106)||(30788348-30788450)
chr5 (1-122)||(41410749-41410870)
chr5 (4-122)||(1831207-1831325)
chr5 (4-122)||(40316674-40316792)
chr5 (4-122)||(40796875-40796993)
chr5 (4-95)||(14639545-14639636)
chr5 (4-122)||(31190980-31191098)
chr5 (4-94)||(40365719-40365809)
chr5 (4-112)||(4152123-4152231)
chr5 (4-124)||(9936689-9936809)
chr5 (4-111)||(40080124-40080231)
chr5 (4-110)||(14633150-14633256)
chr5 (4-106)||(32110461-32110563)
chr5 (4-106)||(39035703-39035805)
chr5 (1-122)||(1780948-1781069)
chr5 (4-122)||(34347614-34347738)
chr5 (4-72)||(41042690-41042758)
chr5 (4-106)||(2799775-2799877)
chr5 (4-106)||(2805941-2806043)
chr5 (4-122)||(14355642-14355760)
chr5 (4-122)||(27675683-27675801)
chr5 (4-122)||(30721488-30721606)
chr5 (1-122)||(14607361-14607481)
chr5 (4-95)||(967337-967428)
chr5 (4-93)||(8627278-8627368)
chr5 (4-122)||(14057851-14057969)
chr5 (4-122)||(19344502-19344620)
chr5 (4-122)||(20023003-20023121)
chr5 (4-122)||(20040218-20040336)
chr5 (4-85)||(32473863-32473943)
chr5 (4-72)||(2551480-2551548)
chr5 (4-72)||(10465148-10465216)
chr5 (4-72)||(14140061-14140129)
chr5 (4-72)||(36578729-36578797)
chr5 (1-93)||(39925344-39925436)
chr5 (4-122)||(41262932-41263050)
chr5 (4-93)||(1098318-1098407)
chr5 (4-72)||(30211594-30211662)
chr5 (4-72)||(30351924-30351992)
chr5 (4-112)||(34169972-34170080)
chr5 (4-95)||(1831494-1831584)
chr5 (4-95)||(40316961-40317051)
chr5 (4-122)||(13548356-13548474)
chr5 (5-72)||(6734925-6734993)
chr5 (4-112)||(20502861-20502969)
chr5 (4-72)||(41410513-41410580)
chr5 (1-64)||(39482783-39482846)
chr5 (5-66)||(3050839-3050900)
chr5 (5-72)||(41625191-41625258)
chr5 (1-71)||(6500272-6500341)
chr5 (6-64)||(21031779-21031837)
chr5 (4-64)||(34278627-34278687)
[»] chr8 (55 HSPs)
chr8 (4-122)||(38036658-38036776)
chr8 (4-122)||(20671399-20671517)
chr8 (4-129)||(21132721-21132846)
chr8 (1-122)||(32909195-32909316)
chr8 (4-112)||(8496696-8496804)
chr8 (4-112)||(29917738-29917846)
chr8 (4-112)||(1645216-1645324)
chr8 (4-112)||(14511983-14512091)
chr8 (4-95)||(44717438-44717529)
chr8 (4-122)||(761693-761811)
chr8 (4-122)||(14378487-14378605)
chr8 (4-122)||(27302005-27302123)
chr8 (8-122)||(29616126-29616240)
chr8 (16-122)||(40645837-40645943)
chr8 (4-122)||(43049069-43049187)
chr8 (1-95)||(44039965-44040059)
chr8 (4-94)||(44871474-44871564)
chr8 (4-122)||(44887515-44887633)
chr8 (7-112)||(67241-67346)
chr8 (4-122)||(4960294-4960412)
chr8 (4-122)||(11756921-11757039)
chr8 (4-122)||(38842306-38842424)
chr8 (4-122)||(44362064-44362182)
chr8 (4-109)||(23547211-23547316)
chr8 (1-72)||(23849755-23849826)
chr8 (4-83)||(25866212-25866291)
chr8 (4-123)||(30464575-30464694)
chr8 (4-106)||(30653503-30653606)
chr8 (4-106)||(8123781-8123883)
chr8 (4-122)||(15870318-15870436)
chr8 (4-130)||(29708704-29708830)
chr8 (4-65)||(5777411-5777472)
chr8 (4-121)||(37094275-37094392)
chr8 (4-72)||(23437663-23437731)
chr8 (4-122)||(14583721-14583840)
chr8 (16-91)||(17523958-17524033)
chr8 (7-122)||(28583102-28583217)
chr8 (4-71)||(42150001-42150068)
chr8 (4-91)||(44020880-44020966)
chr8 (28-122)||(3466453-3466547)
chr8 (4-122)||(11538833-11538950)
chr8 (4-65)||(25009287-25009348)
chr8 (1-106)||(40035427-40035532)
chr8 (8-108)||(4326933-4327033)
chr8 (4-72)||(18419141-18419209)
chr8 (4-82)||(36632034-36632111)
chr8 (44-122)||(44947188-44947266)
chr8 (41-122)||(8058405-8058486)
chr8 (4-65)||(25691454-25691515)
chr8 (4-93)||(16345320-16345409)
chr8 (1-66)||(32061157-32061222)
chr8 (1-76)||(14400907-14400983)
chr8 (1-64)||(1226644-1226706)
chr8 (4-91)||(2026715-2026802)
chr8 (4-72)||(13888480-13888548)
[»] chr3 (72 HSPs)
chr3 (4-106)||(1334112-1334214)
chr3 (4-122)||(10228527-10228645)
chr3 (4-122)||(9997678-9997796)
chr3 (4-109)||(36594229-36594335)
chr3 (4-112)||(44821342-44821450)
chr3 (4-122)||(10106182-10106300)
chr3 (4-122)||(10232283-10232401)
chr3 (1-112)||(32961386-32961497)
chr3 (4-95)||(33462848-33462939)
chr3 (1-72)||(4465021-4465092)
chr3 (4-95)||(43394384-43394475)
chr3 (4-111)||(47070165-47070272)
chr3 (4-95)||(47339909-47340000)
chr3 (4-122)||(16434655-16434773)
chr3 (4-122)||(29793176-29793294)
chr3 (4-122)||(42098425-42098543)
chr3 (1-122)||(49818897-49819018)
chr3 (4-112)||(900896-901004)
chr3 (4-112)||(29720538-29720646)
chr3 (4-124)||(34263500-34263620)
chr3 (4-95)||(3817866-3817957)
chr3 (4-71)||(18013319-18013386)
chr3 (4-122)||(2643068-2643185)
chr3 (4-122)||(12948183-12948301)
chr3 (4-93)||(44774253-44774342)
chr3 (4-72)||(4945699-4945767)
chr3 (4-72)||(9281311-9281379)
chr3 (4-124)||(34555294-34555414)
chr3 (4-100)||(53019971-53020067)
chr3 (4-71)||(29588518-29588585)
chr3 (4-71)||(36178985-36179052)
chr3 (4-122)||(53055425-53055541)
chr3 (4-122)||(29455506-29455624)
chr3 (1-123)||(34669748-34669870)
chr3 (4-122)||(46866486-46866604)
chr3 (4-93)||(9484739-9484828)
chr3 (4-93)||(49076253-49076342)
chr3 (4-93)||(53274822-53274911)
chr3 (4-72)||(1778504-1778572)
chr3 (4-72)||(4229036-4229104)
chr3 (4-112)||(29809487-29809595)
chr3 (4-72)||(36364611-36364679)
chr3 (4-72)||(38878326-38878394)
chr3 (4-72)||(48927650-48927718)
chr3 (1-72)||(50673817-50673888)
chr3 (4-122)||(14750858-14750976)
chr3 (4-122)||(29444851-29444969)
chr3 (1-95)||(43398966-43399060)
chr3 (5-66)||(26759622-26759683)
chr3 (4-72)||(12250446-12250514)
chr3 (1-69)||(23591203-23591270)
chr3 (4-84)||(52093930-52094010)
chr3 (1-64)||(4016605-4016668)
chr3 (4-71)||(28958848-28958915)
chr3 (4-122)||(34680324-34680443)
chr3 (1-92)||(37166619-37166710)
chr3 (1-72)||(43170114-43170185)
chr3 (6-64)||(22755831-22755889)
chr3 (1-71)||(23591469-23591538)
chr3 (1-72)||(40415062-40415135)
chr3 (1-66)||(5852513-5852578)
chr3 (4-72)||(20144770-20144838)
chr3 (4-112)||(38833521-38833629)
chr3 (5-93)||(49220616-49220704)
chr3 (28-91)||(31440461-31440524)
chr3 (4-55)||(43370434-43370485)
chr3 (20-122)||(28389070-28389172)
chr3 (4-71)||(45516895-45516962)
chr3 (1-95)||(9794315-9794409)
chr3 (1-95)||(23631410-23631504)
chr3 (4-61)||(40732688-40732745)
chr3 (4-71)||(39557434-39557499)
[»] chr1 (55 HSPs)
chr1 (4-122)||(5117241-5117359)
chr1 (4-122)||(44963479-44963597)
chr1 (4-106)||(52688674-52688776)
chr1 (4-111)||(43452983-43453090)
chr1 (1-122)||(47912421-47912542)
chr1 (4-124)||(23393375-23393495)
chr1 (4-123)||(40058773-40058892)
chr1 (1-112)||(48312168-48312279)
chr1 (4-122)||(8250650-8250768)
chr1 (4-122)||(26476816-26476934)
chr1 (1-112)||(25815668-25815779)
chr1 (4-122)||(10100320-10100438)
chr1 (4-122)||(31651708-31651826)
chr1 (4-119)||(49903496-49903610)
chr1 (4-122)||(5606198-5606316)
chr1 (1-122)||(10648006-10648126)
chr1 (37-106)||(12685752-12685821)
chr1 (4-72)||(4489204-4489272)
chr1 (4-112)||(7075147-7075255)
chr1 (4-111)||(41414346-41414453)
chr1 (4-123)||(44741486-44741605)
chr1 (4-122)||(8048555-8048673)
chr1 (4-122)||(10124252-10124370)
chr1 (1-95)||(23337947-23338040)
chr1 (4-122)||(44240662-44240780)
chr1 (4-93)||(5945908-5945997)
chr1 (1-122)||(38786753-38786874)
chr1 (4-93)||(52749424-52749513)
chr1 (4-72)||(1821486-1821553)
chr1 (4-72)||(28490303-28490371)
chr1 (7-111)||(52141871-52141975)
chr1 (4-95)||(33525997-33526087)
chr1 (12-112)||(48613898-48613999)
chr1 (4-122)||(31931986-31932103)
chr1 (4-122)||(41855529-41855646)
chr1 (4-112)||(9334524-9334632)
chr1 (4-112)||(9358297-9358405)
chr1 (4-91)||(44452338-44452426)
chr1 (4-91)||(31745884-31745971)
chr1 (4-71)||(40883554-40883620)
chr1 (4-122)||(50014368-50014486)
chr1 (4-77)||(3138735-3138808)
chr1 (4-112)||(45299461-45299570)
chr1 (4-72)||(6017306-6017374)
chr1 (4-95)||(2138863-2138954)
chr1 (1-71)||(2126795-2126865)
chr1 (4-65)||(36035829-36035890)
chr1 (1-72)||(33730054-33730123)
chr1 (4-67)||(48389209-48389273)
chr1 (1-64)||(8980814-8980877)
chr1 (4-54)||(26345279-26345329)
chr1 (1-79)||(42728771-42728847)
chr1 (1-95)||(43452840-43452934)
chr1 (1-54)||(13971631-13971686)
chr1 (35-122)||(29253611-29253699)
[»] chr4 (50 HSPs)
chr4 (4-112)||(1615682-1615790)
chr4 (4-122)||(17492810-17492928)
chr4 (4-122)||(47833946-47834064)
chr4 (5-122)||(2805973-2806090)
chr4 (1-112)||(11260842-11260953)
chr4 (7-122)||(51716677-51716792)
chr4 (4-122)||(24505654-24505772)
chr4 (4-112)||(29821193-29821301)
chr4 (4-122)||(4271816-4271934)
chr4 (4-112)||(39260495-39260603)
chr4 (1-122)||(28988196-28988317)
chr4 (4-122)||(28898873-28898991)
chr4 (4-122)||(39171101-39171219)
chr4 (4-122)||(48079850-48079968)
chr4 (4-122)||(48380899-48381017)
chr4 (4-122)||(51306036-51306154)
chr4 (4-122)||(55631677-55631795)
chr4 (4-112)||(37164159-37164268)
chr4 (4-124)||(3708396-3708516)
chr4 (4-72)||(6520578-6520646)
chr4 (4-112)||(28914511-28914619)
chr4 (1-112)||(37588342-37588454)
chr4 (4-112)||(50685063-50685171)
chr4 (4-123)||(44210292-44210411)
chr4 (1-111)||(1377948-1378058)
chr4 (4-122)||(8525218-8525336)
chr4 (4-122)||(31152804-31152922)
chr4 (4-122)||(39376670-39376788)
chr4 (4-122)||(40411410-40411528)
chr4 (4-122)||(43447308-43447426)
chr4 (4-70)||(52818544-52818610)
chr4 (1-106)||(29424786-29424891)
chr4 (4-92)||(1613050-1613138)
chr4 (5-93)||(1981212-1981300)
chr4 (4-112)||(39332642-39332750)
chr4 (4-111)||(24334191-24334298)
chr4 (4-122)||(46608356-46608475)
chr4 (4-122)||(10384991-10385109)
chr4 (4-94)||(30386974-30387064)
chr4 (4-113)||(54802869-54802978)
chr4 (4-123)||(23605703-23605822)
chr4 (4-95)||(28909669-28909760)
chr4 (4-83)||(37667615-37667694)
chr4 (4-122)||(31657159-31657276)
chr4 (4-122)||(48652615-48652733)
chr4 (4-70)||(43047530-43047596)
chr4 (12-112)||(42185425-42185525)
chr4 (1-77)||(45064407-45064483)
chr4 (4-71)||(42862146-42862213)
chr4 (37-95)||(21045050-21045108)
[»] scaffold0172 (1 HSPs)
scaffold0172 (4-112)||(19548-19656)
[»] chr6 (29 HSPs)
chr6 (4-116)||(31948456-31948567)
chr6 (4-113)||(4889942-4890051)
chr6 (4-95)||(10109245-10109336)
chr6 (4-122)||(31709036-31709153)
chr6 (1-122)||(6142314-6142435)
chr6 (1-124)||(995703-995826)
chr6 (4-122)||(2667132-2667250)
chr6 (4-122)||(35117419-35117537)
chr6 (4-106)||(12677122-12677225)
chr6 (4-111)||(17496146-17496253)
chr6 (4-122)||(2397913-2398031)
chr6 (1-122)||(16661408-16661530)
chr6 (4-112)||(10105954-10106062)
chr6 (4-123)||(32673891-32674010)
chr6 (4-122)||(2141711-2141829)
chr6 (4-122)||(2913040-2913158)
chr6 (4-122)||(29514834-29514951)
chr6 (1-71)||(32541335-32541405)
chr6 (4-109)||(6188476-6188581)
chr6 (4-72)||(26210890-26210958)
chr6 (4-72)||(30699404-30699472)
chr6 (4-95)||(2656504-2656595)
chr6 (15-122)||(16969533-16969640)
chr6 (4-122)||(24825308-24825426)
chr6 (23-112)||(24949834-24949923)
chr6 (4-72)||(24798403-24798471)
chr6 (4-72)||(9022983-9023051)
chr6 (1-64)||(16120739-16120802)
chr6 (6-67)||(26389212-26389273)
[»] scaffold0195 (1 HSPs)
scaffold0195 (4-122)||(48-166)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-122)||(5519-5637)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-123)||(184106-184228)
[»] scaffold1248 (1 HSPs)
scaffold1248 (6-72)||(1309-1375)
[»] scaffold0952 (1 HSPs)
scaffold0952 (6-72)||(938-1004)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-71)||(2074-2144)
[»] scaffold0500 (1 HSPs)
scaffold0500 (4-112)||(490-596)
[»] scaffold0281 (1 HSPs)
scaffold0281 (4-122)||(13247-13366)
[»] scaffold0289 (1 HSPs)
scaffold0289 (4-106)||(9267-9368)
[»] scaffold0283 (1 HSPs)
scaffold0283 (44-122)||(3166-3244)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 9136586 - 9136300
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||    
T  9136586 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaaactcaaaattatgtattgtcatatataataaggtcaactgtttcaa 9136487  T
Q  101 atattaagggacaaagggagtactcttttaaatcattaattaactcatcctttaaggcacaagttaacattgacggtaaaataaaaaactaacagtatat 200  Q
    ||||||||||||  || ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9136486 atattaagggacggagagagtactattttagttcattaattaactcatcctttaaggcacaagttaacattgacggtaaaataaaaaactaacagtatat 9136387  T
Q  201 gagttctaagaaaattatgaaagattgtctttgaaaacattcctttttaagtgaatgagcaatgggcaataatgatggagcaggttc 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9136386 gagttctaagaaaattaggaaagattgtctttgaaaacattccattttaagtgaatgagcaatgggcaataatgatggagcaggttc 9136300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 48448661 - 48448768
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||   |||||||||  |||||||||| |||  ||    
T  48448661 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtcatgta 48448760  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  48448761 ttaaggga 48448768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 47713353 - 47713235
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||| |||||| ||||| ||||| ||||||||  ||||||||||||||| |||||||||| |||| ||||||||||||| ||| |||||||    
T  47713353 aaaatatcaaattgtcataattttttataatatattattcacgatatttaagctcaaagttatgcattgacatgcgtaataaggtcaattgtgtcaaata 47713254  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| |||||  ||||||||    
T  47713253 ttatgggacggagggagta 47713235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 31496566 - 31496467
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||||||||  |||||||| ||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||    
T  31496566 aaaatatcaaattttcataa-tttttctaatat-ttattcaagatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtatcaaata 31496469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 35693754 - 35693633
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||     
T  35693754 tttaaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcac 35693655  T
Q  101 atattaagggacaaagggagta 122  Q
     ||||||||||| |||||||||    
T  35693654 ttattaagggacgaagggagta 35693633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 29247770 - 29247890
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||||||| ||||| || | ||||| |||| ||||||||||||||||| |||| ||    
T  29247770 aaaatatcaaattttcataatttttcttaatatattattcaagatatttaagttcaaagttgtacattgacatgcgtaataaggtcaactgtgtcaagta 29247869  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  29247870 ttaagggacggagggagtact 29247890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 41007878 - 41007770
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||| ||||| |||  ||||||||||||||||| |||| ||    
T  41007878 aaaatatcaaattttcataattttttataatatattattcaagatatttaaactcaaaattatacattgacatacgtaataaggtcaactgtgtcaagta 41007779  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  41007778 ttatgggac 41007770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 46242399 - 46242303
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||||||||||||| ||||||| ||| |||||| || ||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  46242399 aaaatatcaaattttcataattttttctgatatattatttaagatatttaagctcaaagttatgcattatcatgcgtaataaggtcaactgtgtcaa 46242303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 9173257 - 9173166
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||||| |||||||||||||||| |||| |||||| ||||||||||    
T  9173257 aaaatatcaaattttcataattttttataatatattattcaagatatttaagttcaaaattatgcattgacatgcgtaatagggtcaactgt 9173166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 19817478 - 19817580
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| || |||||||||||||  |||| ||||||||||||||| | |||| ||    
T  19817478 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaacttaaaattatgcattagcatgcgtaataaggtcaactatgtcaagta 19817577  T
Q  104 tta 106  Q
    |||    
T  19817578 tta 19817580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 38441956 - 38442061
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||   ||  ||| ||| ||||||||| |||||||    
T  38441956 aaaatatcaaattttcataattttttttaatatattattcaagatatttaagctcaaaattatgcattaatatacgtagtaaagtcaactgtgtcaaata 38442055  T
Q  104 ttaagg 109  Q
    ||||||    
T  38442056 ttaagg 38442061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 36404847 - 36404745
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||||||||| |||| |||| ||  |||||||| |||| ||    
T  36404847 aaaatatcaaatttttctaattttttctaatatattattcaatatatttaagctcaaagttatgcattgacatgcgtaaaaaaatcaactgtgtcaacta 36404748  T
Q  104 tta 106  Q
    |||    
T  36404747 tta 36404745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 40818618 - 40818525
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattca--atatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||||||| ||||||||  ||||||| ||||||||||||||||||||  || ||||||| ||||||||||    
T  40818618 aaaatatcaaattttcataattttttctaatatattattcaagatatattgaagctcaaaattatgcattggtatatgtaatagggtcaactgt 40818525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 3124053 - 3123960
Alignment:
Q  18 tcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaaggga 111  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||  ||||||||| |||| ||||||||||||||||| |||| ||||| ||||    
T  3124053 tcataattttttctaatatattattcaagatatttaagctcaaagatatgcattgacatgcgtaataaggtcaactgtgtcaagtattatggga 3123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 18756732 - 18756848
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||| |||| |||||||||||||||||  ||| ||||| ||||||||||| |||  ||    
T  18756732 aaaatatcaaattttcataattttttctaatatattattcaaaatagttaaactcaaaattatgcattgatatgcgtaat-aggtcaactgtgtcatgta 18756830  T
Q  104 ttaagggacaaagggagt 121  Q
    ||| |||||  |||||||    
T  18756831 ttatgggacggagggagt 18756848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 32972256 - 32972131
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||   ||| |||||    |||||||| |||  ||    
T  32972256 aaaatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattagaatgcgtaatggaatcaactgtgtcattta 32972157  T
Q  104 ttaagggacaaagggagtactctttt 129  Q
    |||||||||  |||||||||| ||||    
T  32972156 ttaagggacggagggagtactttttt 32972131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38069191 - 38069312
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| |||| |||||| || |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||     
T  38069191 tttaaaatatcaaattttcataattttttccaatatattatttaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcac 38069290  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  38069291 ttattaagggactgagggagta 38069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 16807067 - 16806949
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||| ||||||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||  ||| |||||  |||||||||| |||  ||    
T  16807067 aaaatatctaattttcataattttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcactta 16806968  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  16806967 ttaagtgacggagggagta 16806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 36820019 - 36820137
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||  |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  36820019 aaaatatcaaattttcataattttttccaatatattattcatgatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 36820118  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  36820119 ttaagggacggagggagta 36820137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 38850845 - 38850907
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattat 66  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  38850845 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattat 38850907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 32345704 - 32345596
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||   ||||||||| |||  ||    
T  32345704 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactgtgtcactta 32345605  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  32345604 ttaagggac 32345596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 4620208 - 4620294
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| |||||||| ||||||||||||||||  ||||| ||||| ||||||    
T  4620208 aaaatatcaaatttt-ataattttttctaatatattattcaagatatttaaactcaaaattatgcattaacatgtataatatggtcaa 4620294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19327455 - 19327526
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||||||||| | ||||||||| | ||||||||| ||||||||| ||||||||||||||||    
T  19327455 tttaaaatatcaaattttcatgattttttctaacatattattcaagatatttaagttcaaaattatgcattg 19327526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25273941 - 25273870
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  25273941 tttaaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 25273870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 5842260 - 5842369
Alignment:
Q  4 aaaatatcaaattttcataaattt-ttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    ||||||||||||||||| |||    |||||||| ||||||||| |||||||||||||||||||||||||| |||  |||||| |||||||||| |||  |    
T  5842260 aaaatatcaaattttcaaaaaaaaattctaatatattattcaagatatttaagctcaaaattatgcattgacattcgtaatatggtcaactgtgtcatgt 5842359  T
Q  103 attaagggac 112  Q
    |||| |||||    
T  5842360 attatgggac 5842369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 33376918 - 33377025
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||| |||| ||||| ||| | ||| || ||||||||| | || ||    
T  33376918 aaaatatcaaatttttataa-tttttctaatatattattcaagatatttaagctcaaagttatacattgacatatataacaaagtcaactgtattaagta 33377016  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  33377017 ttatgggac 33377025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 41844912 - 41845020
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaa-tacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| |||| |||| || |||||| || ||||||||||||||| |||||||||   ||| ||||||||||||| ||| | || |    
T  41844912 aaaatatcaaattttcataatttttcctaaatatattattgaagatatttaagctcaaagttatgcattaaaatgcgtaataaggtcaaatgtgttaagt 41845011  T
Q  103 attaaggga 111  Q
    |||||||||    
T  41845012 attaaggga 41845020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 25571587 - 25571495
Alignment:
Q  30 ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    |||||| ||||||||| ||||||||||| ||||||||| |||| |||  |||||| |||||||||| |||  ||||| ||||| |||||||||    
T  25571587 ctaatatattattcaagatatttaagcttaaaattatgtattgacattcgtaatagggtcaactgtgtcacgtattatgggacgaagggagta 25571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 38259623 - 38259731
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| || | ||||||||| | ||||||||| | |||||| || ||||||||||||||  |||| |||| | ||||||| | ||| |||    
T  38259623 aaaatatcaaatttttatgattttttctaacatattattcaagacatttaaacttaaaattatgcattgaaatgtataatgaagtcaactatgtcatata 38259722  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  38259723 ttaagggac 38259731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 27621216 - 27621149
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||| ||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| |||||    
T  27621216 aaaaaatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcatt 27621149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47080757 - 47080828
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| |||| ||||||||||| |||| | ||  |||||||| ||||||||||||||||    
T  47080757 tttaaaatatcaaatttttataattttttctaatagattagtaaagttatttaagatcaaaattatgcattg 47080828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 37099754 - 37099689
Alignment:
Q  47 atatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggac 112  Q
    |||||||| ||||||||||||||||| |||| |||||||| |||||||| |||| ||||| |||||    
T  37099754 atatttaatctcaaaattatgcattgacatgcgtaataagatcaactgtgtcaagtattatgggac 37099689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38353522 - 38353401
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||| |||||||||||| ||||| ||| | ||||||||| |||||||| || |  ||||||||||| ||||  |||||   |||||||| |||     
T  38353522 tttaaaatataaaattttcataattttttataacatattattcaagatatttaaacttagtattatgcattggcatgcataatagaatcaactgtgtcat 38353423  T
Q  101 atattaagggacaaagggagta 122  Q
     ||||| |||||| ||||||||    
T  38353422 gtattatgggacagagggagta 38353401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30462142 - 30462074
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| || ||||||| ||||||    
T  30462142 aaaatatcaaattttcataattttttacaatatattattcaagatatttaaacttaaaattacgcattg 30462074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32222690 - 32222800
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttcta--atacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttc 98  Q
    ||||||||||| ||||||||||| ||||||||  ||| ||||||||| ||| |||| |||||| ||||| |||| |||  | |||||||||||  || ||    
T  32222690 tttaaaatatcgaattttcataattttttctaatatatattattcaagataattaaactcaaagttatgtattgacatacgcaataaggtcaagcgtgtc 32222789  T
Q  99 aaatattaagg 109  Q
    || ||||||||    
T  32222790 aagtattaagg 32222800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 26651136 - 26651051
Alignment:
Q  37 attattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    ||||||||| |||||||||||||||||||||  |||  ||| |||||| |||||||||| |||  ||||| |||||  ||||||||    
T  26651136 attattcaagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtcatttattatgggacggagggagta 26651051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 38198598 - 38198522
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgta 81  Q
    |||||| |||||||||||| |||||| ||||||| ||| |||||||| ||| | |||| |||||||||  |||||||    
T  38198598 aaatattaaattttcataattttttcaaatacataattaaatatattaaagataaaaaatatgcattgatatgtgta 38198522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48796310 - 48796354
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaa 45  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  48796310 tttaaaatattcaattttcataattttttctaatacattattcaa 48796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 14543703 - 14543645
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||||||||| |||||||| ||||||||||| |||||| || |||||||| |||||||||    
T  14543703 aaatatcaaaatttcataa-tttttctaatagattattaaagatatttaaactcaaaatt 14543645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 27248766 - 27248699
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    ||||||||||||||| |||| ||||||||||| |||| | ||  |||||||| |||||||| ||||||    
T  27248766 aaaatatcaaatttttataattttttctaatagattagttaagttatttaagatcaaaattgtgcatt 27248699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 28016581 - 28016671
Alignment:
Q  31 taatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    ||||| ||||||||| |||||||||||| |||||||||||||  ||| ||||||  || |||||| |||  ||||| ||||| |||||||||    
T  28016581 taatatattattcaagatatttaagctc-aaattatgcattggtatgcgtaatagagttaactgtgtcatgtattatgggacgaagggagta 28016671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 39174005 - 39174066
Alignment:
Q  52 taagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggaca 113  Q
    |||| |||||||||| ||| | ||| |||||||||||||||||| |||| ||||| ||||||    
T  39174005 taaggtcaaaattatacatcggcatatgtaataaggtcaactgtgtcaagtattatgggaca 39174066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 40232071 - 40232112
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaa 45  Q
    |||||||||||||||||||| |||||| |||| |||||||||    
T  40232071 aaaatatcaaattttcataattttttccaatatattattcaa 40232112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 7313019 - 7312951
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||| |||| ||||||||||| |||| | ||  |||||||| ||||||| ||| ||||    
T  7313019 aaaatatcaaatttttataattttttctaataaattaataaagttatttaagatcaaaatgatgaattg 7312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 25627166 - 25627286
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | |||| ||    
T  25627166 aaaatatcaaattttcataattttttataatatattattcaatatatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtcaagta 25627265  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  25627266 ttaagggacggagggagtact 25627286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 7601317 - 7601209
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||| ||||||||| |||| ||    
T  7601317 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagta 7601218  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  7601217 ttaagggac 7601209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 44022411 - 44022511
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||| |||    
T  44022411 aaaatatcaaatttttataattttttctaatatattattcaatatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtgtcatata 44022510  T
Q  104 t 104  Q
    |    
T  44022511 t 44022511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 26436607 - 26436505
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||| |||||||||| |||| ||||||||||||||| | | |||||    
T  26436607 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaagttatgcattgacatgcgtaataaggtcaactatgttaaata 26436508  T
Q  104 tta 106  Q
    |||    
T  26436507 tta 26436505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 15177512 - 15177632
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| |||| |||| |||||||| |||||||||||||||| |||||||||||| ||||| |||| |||  ||    
T  15177512 aaaatatcaaattttcataattttttataatatattactcaagatatttaaactcaaaattatgcattttcatgtgtaatatggtcatctgtgtcatgta 15177611  T
Q  104 ttaagggacaaagggagtact 124  Q
    ||| |||||  ||||||||||    
T  15177612 ttatgggacggagggagtact 15177632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 18504615 - 18504718
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||| ||||||||||||| |||  ||||||||||||||| | |||| ||    
T  18504615 aaaatatcaaattttcataattttttctcatatattattcaagatatttaagctcgaaattatgcattgacatacgtaataaggtcaactatatcaagta 18504714  T
Q  104 ttaa 107  Q
    ||||    
T  18504715 ttaa 18504718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 43328721 - 43328615
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||  ||| ||||||||||||| ||| |||| ||    
T  43328721 aaaatatcaaattttcataattttttataatatattattcaaaatatttaagctaaaaattatgcattg-gatgcgtaataaggtcaattgtgtcaagta 43328623  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  43328622 ttaaggga 43328615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 41575705 - 41575823
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||||||| ||| |||    
T  41575705 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatgcagtcaactgtatcatata 41575804  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  41575805 ttaagggacggagggagta 41575823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 16126002 - 16125885
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||| ||| |||||| |||| ||||||||| ||||||||| ||||||||||||||||  ||| ||||| ||||||||||| |||  ||    
T  16126002 aaaatatcaaattttcgtaa-tttttcaaatatattattcaagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaactgtctcatgta 16125904  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||| ||||||||    
T  16125903 ttaagagacagagggagta 16125885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 16333623 - 16333740
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||| ||| |||||| |||| ||||||||| ||||||||| ||||||||||||||||  ||| ||||| ||||||||||| |||  ||    
T  16333623 aaaatatcaaattttcgtaa-tttttcaaatatattattcaagatatttaaggtcaaaattatgcattggtatgcgtaattaggtcaactgtctcatgta 16333721  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||| ||||||||    
T  16333722 ttaagagacagagggagta 16333740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 37317019 - 37317137
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  37317019 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgta 37317118  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  37317119 ttaagggacggagggagta 37317137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 2831874 - 2831959
Alignment:
Q  27 tttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggac 112  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||||||| |||| ||||| |||||    
T  2831874 tttctaatatattattcaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaactgtgtcaagtattatgggac 2831959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 11383961 - 11383874
Alignment:
Q  8 tatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||| |||  |||  ||||||||||||||||    
T  11383961 tatcaaattttcataagtttttctaatatattattcaagatatttaaactcaaaattatgcgttggtatggataataaggtcaactgt 11383874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 6730023 - 6729905
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||| ||| |||  ||    
T  6730023 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaagtgtgtcatgta 6729924  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  6729923 ttaagggacggagggagta 6729905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 10333498 - 10333380
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||| |||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  10333498 aaaatatcaaattgtcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaatcgggtcaactgtgtcactta 10333399  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  10333398 ttaagggacggagggagta 10333380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 20682785 - 20682903
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||| |||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  20682785 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcattta 20682884  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  20682885 ttaagggacggagggagta 20682903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 41319844 - 41319726
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  41319844 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 41319745  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  41319744 ttaagggacggagggagta 41319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 41436975 - 41437093
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||   |||||||||| |||  ||    
T  41436975 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcactta 41437074  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  41437075 ttaagggacggagggagta 41437093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4137549 - 4137657
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| ||||||  ||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||     
T  4137549 tttaaaatatcaaattttcataattttttccgatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcac 4137648  T
Q  101 atattaagg 109  Q
     ||||||||    
T  4137649 ttattaagg 4137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 40471881 - 40471997
Alignment:
Q  6 aatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatt 105  Q
    |||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||||    
T  40471881 aatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcatttatt 40471980  T
Q  106 aagggacaaagggagta 122  Q
    |||||||  ||||||||    
T  40471981 aagggacggagggagta 40471997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 7724531 - 7724412
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| ||||| | |||| ||||||||| |||||||| | |||||||| ||||||  ||| |||||  |||||||||| |||  |    
T  7724531 aaaatatcaaattttcataatttttttccaatatattattcaagatatttaaacccaaaattacgcattggtatgcgtaattgggtcaactgtgtcactt 7724432  T
Q  103 attaagggacaaagggagta 122  Q
    ||||||||||| ||||||||    
T  7724431 attaagggacagagggagta 7724412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 16127700 - 16127594
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| |||||| || ||||||||| || ||||||||||||| |||| ||||| ||||||| ||| |||  ||    
T  16127700 aaaatatcaaattttcataa-tttttcaaatatattatttaagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtcatgta 16127602  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  16127601 ttaaggga 16127594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 45036506 - 45036597
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||||||| |||||| || |||||||| || ||||||||||||||  ||  |||||| ||||||||||    
T  45036506 aaaatatcaaattttcataattttttctaatatattatttaagatatttaaacttaaaattatgcattggtatacgtaatagggtcaactgt 45036597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 5096391 - 5096509
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||    |||||||| |||  ||    
T  5096391 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgaatcaactgtgtcactta 5096490  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  5096491 ttaagggacggagggagta 5096509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 22718463 - 22718357
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||| ||||  ||| |||||   ||||||||| |||  ||    
T  22718463 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtatcatgta 22718364  T
Q  104 ttaaggg 110  Q
    |||||||    
T  22718363 ttaaggg 22718357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 31603336 - 31603219
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  |||  ||||  |||||||||| |||  ||    
T  31603336 aaaatatcaaattttcataa-tttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcctaattgggtcaactgtgtcactta 31603238  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  31603237 ttaagggacggagggagta 31603219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 38963938 - 38964056
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||   ||||||||| |||  ||    
T  38963938 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaaattacacattggtatgcgtaattgagtcaactgtgtcactta 38964037  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||| || || ||||||    
T  38964038 ttaaggaacgaaaggagta 38964056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 42754275 - 42754157
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||  |||||||||| |||  ||    
T  42754275 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcactta 42754176  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  42754175 ttaagggacggagggagta 42754157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 1749092 - 1749024
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  1749092 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 1749024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 12209132 - 12209200
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||| |||||    
T  12209132 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattatacattg 12209200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 16646389 - 16646497
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||  | ||||||||| ||||||||||| ||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  16646389 aaaatatcaaattttcataattttttttatcatattattcaagatatttaagcttaaaattatgcattgaaatgcgtaatggagtcaactgtatcatgta 16646488  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  16646489 ttaagggac 16646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 11277677 - 11277795
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||    |||||||| |||  ||    
T  11277677 aaaatatcaaattttcataatttttttcaatatattattcaaaatatttaaactcaaaattacgcattggtatgcgtaatttcatcaactgtatcactta 11277776  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  11277777 ttaagggacggagggagta 11277795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33046158 - 33046064
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||| |||| ||||||||||| |||| | ||  |||||||| || |||||||||||||  |||||| |||| |||||||||    
T  33046158 tttaaaatatcaaatttttataattttttctaatagattagtaaagttatttaagatcgaaattatgcattggtatgtgttataaagtcaactgt 33046064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 37987856 - 37987795
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatta 65  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||    
T  37987856 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaatta 37987795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 8373577 - 8373685
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| || |||||||  |||||  ||  |||||  |||||||||| |||  ||    
T  8373577 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaacttaaaattacacattgatatacgtaattgggtcaactgtgtcactta 8373676  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  8373677 ttaagggac 8373685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 8896414 - 8896505
Alignment:
Q  4 aaaatatcaaattttcataaatttttc-taatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| |||||  || || |||||| || |||||||  ||||||||||||||||| ||||||||||| ||||||||||    
T  8896414 aaaatatcaaattttcataatttttttatattatattatt-aagatatttagcctcaaaattatgcattgacatgtgtaatagggtcaactgt 8896505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45001807 - 45001736
Alignment:
Q  1 tttaaaatatcaaatttt-cataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||||||||||| |||||||| |||||||    
T  45001807 tttaaaatatcaaatttttcataa-tttttctaataaattattaaatatatttaagttcaaaattgtgcattg 45001736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8924662 - 8924599
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||||||||||||||||| |||| ||||||||||| |||||| || ||||||||| ||||||||    
T  8924662 tttaaaatatcaaatttttataattttttctaatagattattaaagatatttaagatcaaaatt 8924599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 6075272 - 6075336
Alignment:
Q  8 tatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||| ||||||||  | ||||||||| ||||||||| | ||||||||||||||    
T  6075272 tatcaaattttcataattttttctagcatattattcaaaatatttaagtttaaaattatgcattg 6075336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41465218 - 41465289
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||| |||||||||||| ||||||||||| |||||| || | | ||||| |||||||| |||||||    
T  41465218 tttaaaatataaaattttcataattttttctaatagattattaaaaacacttaagttcaaaattgtgcattg 41465289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 19637897 - 19637963
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||| ||||||||||| |||||| ||||| |||||| || ||||||||| |||||||||| ||||    
T  19637897 aaatattaaattttcatatatttttttaataaattatttaaaatatttaagatcaaaattatacatt 19637963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 19836490 - 19836556
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||| ||||||||||| |||||| ||||| |||||| || ||||||||| |||||||||| ||||    
T  19836490 aaatattaaattttcatatatttttttaataaattatttaaaatatttaagatcaaaattatacatt 19836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31644255 - 31644147
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacatt-attcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttca 99  Q
    |||||||||| |||||||||||| ||||   |||| ||| |||||| || |||||| ||||| ||||||||   |||| ||||||||||||||||| |||    
T  31644255 tttaaaatattaaattttcataattttt---aatatatttattcaagatgtttaagttcaaagttatgcatatgcatgcgtaataaggtcaactgtgtca 31644159  T
Q  100 aatattaaggga 111  Q
    | ||||| ||||    
T  31644158 agtattatggga 31644147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38934953 - 38934893
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaa 62  Q
    ||||||||||||||||||||| ||||||||||||| | |||| || ||||||||| ||||||    
T  38934953 tttaaaatatcaaattttcat-aatttttctaatatactattaaaaatatttaagatcaaaa 38934893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 9273793 - 9273849
Alignment:
Q  37 attattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    ||||||||| ||||||||| ||||| |||||||||| |||  |||||||||||||||    
T  9273793 attattcaagatatttaagttcaaagttatgcattgacatacgtaataaggtcaact 9273849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 2543979 - 2544070
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||| || |||| ||||| ||||| |||  | ||  |||||||| ||||||||||||||||  |||||| | ||||||||||||    
T  2543979 aaaatatcaaatctttataattttttttaatagattggtaaagttatttaagatcaaaattatgcattgatatgtgtgacaaggtcaactgt 2544070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15771005 - 15770911
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||| |||| ||||||| ||| |||| | ||  |||||||  ||||||||||| ||||  |||||||| |  |||||||||    
T  15771005 tttaaaatatcaaatttttataattttttcttatagattagtaaagttatttaaagtcaaaattatgtattggtatgtgtaacagagtcaactgt 15770911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25762334 - 25762428
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||| |||| ||||||||| | |||| | ||  |||||||  |||||||| |||||||  |||||| | || |||||||||    
T  25762334 tttaaaatatcaaatttttataattttttctaaaagattaataaaattatttaatatcaaaattgtgcattgatatgtgtgacaatgtcaactgt 25762428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 24853392 - 24853458
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||| |||| |||||  |||| | |||| || ||||||||| ||||||||||||||||    
T  24853392 aaaatatcaaattttgataatttttt--aatagaatattaaagatatttaagttcaaaattatgcattg 24853458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 39104197 - 39104098
Alignment:
Q  7 atatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatta 106  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  39104197 atatcaaattttcataattttttctaatatattattcaatatatttaagctcaaaattatgcattggcatgcgtaataaggtcaactatatcaaatatta 39104098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 26802022 - 26801904
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  26802022 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 26801923  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  26801922 ttaagggacggagggagta 26801904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 26809572 - 26809454
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  26809572 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 26809473  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  26809472 ttaagggacggagggagta 26809454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 27674360 - 27674478
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| |||| |||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  27674360 aaaatattaaattttcataatttttcctaatacattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 27674459  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  27674460 ttaagggaccgagggagta 27674478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 1918751 - 1918660
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  1918751 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaggtcaaaattatgcattggcatgtgtaataaggtcaactgt 1918660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 26824599 - 26824481
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  26824599 aaaatatcaaattttcataatttttactaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 26824500  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  26824499 ttaagggacggagggagta 26824481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 30788348 - 30788450
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||    
T  30788348 aaaatatcaaattttcataattttttttaatatattattcaagatatttaagctcaaaattatgcattgacatgcgttataaggtcaactgtttcaagta 30788447  T
Q  104 tta 106  Q
    |||    
T  30788448 tta 30788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 41410870 - 41410749
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||| ||||||||  ||||    
T  41410870 tttaaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaa 41410771  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  41410770 gtattaagggacggagggagta 41410749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 1831207 - 1831325
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||| ||||||||  |||| ||    
T  1831207 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagta 1831306  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  1831307 ttaagggacggagggagta 1831325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 40316674 - 40316792
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||| ||||||||  |||| ||    
T  40316674 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgggtcaagta 40316773  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  40316774 ttaagggacggagggagta 40316792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 40796993 - 40796875
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | |||| |||||| |||||||||  |||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  40796993 aaaatatcaaattttcatgatttttcctaatatattattcaaggtatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 40796894  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||| ||||||||    
T  40796893 ttaagggacagagggagta 40796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 14639636 - 14639545
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||| |||  |||||||| ||||||||    
T  14639636 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatacgtaataagatcaactgt 14639545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 31191098 - 31190980
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  31191098 aaaatatcaaattttcataattttttccaatacattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcactta 31190999  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  31190998 ttaagggacggagggagta 31190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 40365809 - 40365719
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactg 94  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||    
T  40365809 aaaatatcaaattttcataatttttcctaatatattattcaaaatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactg 40365719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 4152231 - 4152123
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||| |||  |||| |||||||||| | ||| |||    
T  4152231 aaaatatcagattttcataattttttctaacatattattcaatatatttaagctcaaaaatatgcattgacattcgtaacaaggtcaactatgtcatata 4152132  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  4152131 ttatgggac 4152123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 9936809 - 9936689
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  9936809 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcactta 9936710  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  9936709 ttaagggacggagggagtact 9936689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 40080124 - 40080231
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||| |||||  ||| ||||||  ||||||||| |||  ||    
T  40080124 aaaatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatacattggaatgcgtaatagagtcaactgtgtcattta 40080223  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  40080224 ttaaggga 40080231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 14633150 - 14633256
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||| ||||||||||| |||  ||    
T  14633150 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcactta 14633249  T
Q  104 ttaaggg 110  Q
    |||||||    
T  14633250 ttaaggg 14633256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 32110563 - 32110461
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||| ||||||||||  ||| ||||||| ||||||| | |||| ||    
T  32110563 aaaatatcaaattttcataattttttctaatatattattcaagatattgaagctcaaagttatgcattgagatgcgtaataatgtcaactctgtcaagta 32110464  T
Q  104 tta 106  Q
    |||    
T  32110463 tta 32110461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 39035703 - 39035805
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||  ||| ||||||| ||||| |||||||    
T  39035703 aaaatatgaaattttcataattttttataatatattattcaagatatttaagctcaaaattattcattgacatacgtagtaaggtcgactgtgtcaaata 39035802  T
Q  104 tta 106  Q
    |||    
T  39035803 tta 39035805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1781069 - 1780948
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| |||| |||| |||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||     
T  1781069 tttaaaatatcaaattttcataattttttccaatatattactcaagatatttaaactcaaaattacgcattggtatgagtaattgggtcaactgtgtcac 1780970  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  1780969 ttattaagggacggagggagta 1780948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 34347614 - 34347738
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcat------tgtcatgtgtaataaggtcaactgttt 97  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| ||||||||      || |||| ||||||||||||||| | |    
T  34347614 aaaatatcaaattttcataattttttctaatatattattcaagatacttaagctcaaagttatgcattgacaatgacatgcgtaataaggtcaactatgt 34347713  T
Q  98 caaatattaagggacaaagggagta 122  Q
    ||||||||| |||| | ||||||||    
T  34347714 caaatattatgggatagagggagta 34347738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 41042758 - 41042690
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  41042758 aaaatatcaaattttcatgattttttctaacatattattcaatatatttaagctcaaaattatgcattg 41042690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 2799775 - 2799877
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| |||||||||||  |||||||| |||||||| |||||| |||| ||||| |||| ||||||| ||||||||| |||| ||    
T  2799775 aaaatataaaattttcataattttttctaatattttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagta 2799874  T
Q  104 tta 106  Q
    |||    
T  2799875 tta 2799877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 2805941 - 2806043
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| |||||||||||  |||||||| |||||||| |||||| |||| ||||| |||| ||||||| ||||||||| |||| ||    
T  2805941 aaaatataaaattttcataattttttctaatattttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtcaagta 2806040  T
Q  104 tta 106  Q
    |||    
T  2806041 tta 2806043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 14355642 - 14355760
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| |||||| || |||||||||||||||||||| ||| | |||| ||||||| || || ||| |||| ||    
T  14355642 aaaatatcaaattttcataattttttataatatattatttaagatatttaagctcaaaattatccatcgacatgcgtaataaagtgaattgtgtcaagta 14355741  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| |||||| || |||||    
T  14355742 ttatgggacagagcgagta 14355760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 27675683 - 27675801
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | |||||| || ||||||||||||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  27675683 aaaatatcaaattttcatgattttttctaacatattatttaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcattta 27675782  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  27675783 ttaagggacggagggagta 27675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 30721606 - 30721488
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||| ||| ||||||  ||| |||||  |||||||||| |||  ||    
T  30721606 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaactgtgtcactta 30721507  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  30721506 ttaagggacggagggagta 30721488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 14607481 - 14607361
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| |||||   ||| |||||  |||||||||| |||     
T  14607481 tttaaaatatcaaattttcataattttttc-aatatattattcaagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtcac 14607383  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  14607382 ttattaagggacggagggagta 14607361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 967337 - 967428
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||||||||| |||| |||||||||   ||||||||| ||||||||| ||||||||||||||||  ||| ||||||| |||||||||    
T  967337 aaaatatcaaatttttataattttttctaacttattattcaagatatttaagttcaaaattatgcattggtatgcgtaataaagtcaactgt 967428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 8627278 - 8627368
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctc-aaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    ||||||| ||||||| |||| ||||||||||| ||||||||| |||||||| ||| ||||||||||||||  |||||||||||| ||||||    
T  8627278 aaaatataaaatttttataattttttctaatatattattcaagatatttaaactcaaaaattatgcattgatatgtgtaataagatcaact 8627368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 14057851 - 14057969
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  |||  ||||  |||||| ||| |||  ||    
T  14057851 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcataattgggtcaattgtgtcactta 14057950  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  14057951 ttaagggacggagggagta 14057969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 19344620 - 19344502
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||  ||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  19344620 aaaatatcaaattttcataattttttccgatatattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcattta 19344521  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  19344520 ttaagagacggagggagta 19344502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 20023003 - 20023121
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  20023003 aaaatatcaaatttttataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 20023102  T
Q  104 ttaagggacaaagggagta 122  Q
    || ||||||  ||||||||    
T  20023103 ttgagggacggagggagta 20023121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 20040336 - 20040218
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||||||||  ||||| |||| ||||||||| ||||||||  ||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  20040336 aaaatatcaaattttcataatcttttccaatatattattcaagatatttaaattcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 20040237  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  20040236 ttaagggacggagggagta 20040218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 32473943 - 32473863
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataa 85  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||| |||||||||||||||||  |||| |||||||    
T  32473943 aaaatatcaaattttcataatttttt-taatatattattcaagatatttacgctcaaaattatgcattaacatgcgtaataa 32473863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 2551548 - 2551480
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||| ||||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||    
T  2551548 aaaatatcaaatattcataattttttttaatatattattcaagatatttaaactcaaaattatgcattg 2551480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 10465216 - 10465148
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||| ||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  10465216 aaaatatcaatttttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattg 10465148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 14140061 - 14140129
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||| |||||||||||||||||    
T  14140061 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaaactcaaaattatgcattg 14140129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 36578729 - 36578797
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| | |||||| |||||||    
T  36578729 aaaatatcaaattttcataattttttctaatagattattcaagatatttaagatgaaaattgtgcattg 36578797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 39925344 - 39925436
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||| |||| |||||| || | ||||||||| |||||||| ||||||||||||||||| |||  |||||| ||| ||||    
T  39925344 tttaaaatatcaaatttttataattttttccaacatattattcaagatatttaaactcaaaattatgcattgacatacgtaatagggttaact 39925436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 41263050 - 41262932
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||| ||| ||||||  ||| |||||  |||||| ||| |||  ||    
T  41263050 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaattgtgtcactta 41262951  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  41262950 ttaagagacggagggagta 41262932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 1098318 - 1098407
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||    
T  1098318 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 1098407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30211662 - 30211594
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||| |||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  30211662 aaaatatcaaatttttataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 30211594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30351992 - 30351924
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||| ||| ||||| |||||||| |||||||||| ||||||    
T  30351992 aaaatatcaaattttcataattttttccaatatattgttcaagatatttaaactcaaaattacgcattg 30351924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 34169972 - 34170080
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||| ||| |||||||||||||||||||| ||||   ||| |||||   ||||||||| |||  ||    
T  34169972 aaaatatcaaattttcatgattttttctaacatattatccaaaatatttaagctcaaaattatacattagaatgcgtaattgagtcaactgtgtcatgta 34170071  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  34170072 ttaagggac 34170080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 1831494 - 1831584
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||||    
T  1831494 aaaatatcaaatttttat-aatttttttaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 1831584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 40316961 - 40317051
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||||    
T  40316961 aaaatatcaaatttttat-aatttttttaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 40317051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 13548356 - 13548474
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| | ||||  ||| |||||   ||||| ||| |||  ||    
T  13548356 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgtattgatatgcgtaattgagtcaattgtgtcactta 13548455  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||| | ||||||    
T  13548456 ttaagggacagatggagta 13548474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 6734925 - 6734993
Alignment:
Q  5 aaatatcaaattttcataaatttttct-aatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||| |||| ||||| | |||| ||||||||| |||||||||||||||||||| |||||    
T  6734925 aaatatcaaattttgataatttttttttaatatattattcaagatatttaagctcaaaattatacattg 6734993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 20502969 - 20502861
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||| ||||| ||||| ||||| |||| | || ||||||||| ||||||| |||||||| ||   |||||| |||||||||| |||  ||    
T  20502969 aaaatatcaaatttacataattttttttaatatattacttaacatatttaagttcaaaataatgcattgacaaacgtaatagggtcaactgtgtcatcta 20502870  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  20502869 ttatgggac 20502861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 41410580 - 41410513
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||| || ||||||| ||||| ||||||||| |||||||| |||||||||| ||||||    
T  41410580 aaaatatcaaatttttat-aatttttttaatatattattcaagatatttaaactcaaaattacgcattg 41410513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39482846 - 39482783
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||||||||||| ||||| |||| ||||||||||| |||||| |||||||||||| ||| ||||    
T  39482846 tttaaaatatcagatttttataattttttctaatagattattaaatatatttaagatcataatt 39482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 3050900 - 3050839
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattat 66  Q
    ||||||||||||||||||| ||||||||||| |||| | || ||||||||  ||||||||||    
T  3050900 aaatatcaaattttcataattttttctaataaattaataaaaatatttaaaatcaaaattat 3050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 41625258 - 41625191
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||| |||||||||||| |||||| |||| |||||| || ||||||||  |||||||| |||||||    
T  41625258 aaatattaaattttcataattttttcgaataaattattaaagatatttaaattcaaaattgtgcattg 41625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6500272 - 6500341
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||| |||||||||||||||||| ||||||||||| ||||||  | ||||||||| ||||| || ||||||    
T  6500272 tttataatatcaaattttcataa-tttttctaataaattattataaatatttaagatcaaatttgtgcatt 6500341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 21031779 - 21031837
Alignment:
Q  6 aatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||| |||||||| |||| ||||||||||| |||||| || ||||||||| ||||||||    
T  21031779 aataccaaatttttataattttttctaatatattattaaagatatttaagatcaaaatt 21031837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 34278687 - 34278627
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    ||||||| ||||||| |||| |||||| |||| |||||| |||||||||||| | ||||||    
T  34278687 aaaatattaaatttttataattttttcaaatagattattaaatatatttaagtttaaaatt 34278627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 38036776 - 38036658
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  38036776 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 38036677  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  38036676 ttaagggacggagggagta 38036658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 20671399 - 20671517
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||  |||||||| |||| ||||||||||||||||| |||| ||    
T  20671399 aaaatatcaaattttcataattttttctaatatataattcaaaatatttaagctcaaaaccatgcattgacatgcgtaataaggtcaactgtgtcaagta 20671498  T
Q  104 ttaagggacaaagggagta 122  Q
    ||  |||||  ||||||||    
T  20671499 ttgtgggacggagggagta 20671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 21132846 - 21132721
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||  ||| |||||  |||||||||| |||  ||    
T  21132846 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtcactta 21132747  T
Q  104 ttaagggacaaagggagtactctttt 129  Q
    |||||||||  |||||||||| ||||    
T  21132746 ttaagggacggagggagtactatttt 21132721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32909195 - 32909316
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||| || ||||||||| |||| |||||| ||||||||| ||||||||||||||| |||||||||| |||| |||||||  |||| ||| ||||    
T  32909195 tttaaaatattaatttttcataatttttcctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaaatcaattgtgtcaa 32909294  T
Q  101 atattaagggacaaagggagta 122  Q
     ||||||||||| |||||||||    
T  32909295 gtattaagggacgaagggagta 32909316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 8496804 - 8496696
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||  |||||| |||||||||| |||  ||    
T  8496804 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgtatcatgta 8496705  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  8496704 ttatgggac 8496696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 29917846 - 29917738
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||| |  |||| ||||||||||| | ||| |||| ||    
T  29917846 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagatcaaaattatgcactcgcatgcgtaataaggtcgattgtgtcaagta 29917747  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  29917746 ttaagggac 29917738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 1645324 - 1645216
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||    ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||  ||| |||| ||    
T  1645324 aaaatatcaaattttttgtaatttttctaatacattattcaagatatttaagctcaaacttatgcattgacatgcgtaataaggtcatatgtatcaagta 1645225  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  1645224 ttatgggac 1645216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 14511983 - 14512091
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||  ||||||| |||| ||| |||| ||    
T  14511983 aaaatatcaaatttttataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcataataagatcaattgtgtcaagta 14512082  T
Q  104 ttaagggac 112  Q
    |||| ||||    
T  14512083 ttaaaggac 14512091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 44717438 - 44717529
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||| |||| |||| |||||||| ||||||||    
T  44717438 aaaatatcaaattttcataattttttataatatattattcatgatatttaagctcaaaattatgaattgacatgcgtaataagatcaactgt 44717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 761693 - 761811
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  761693 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 761792  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  761793 ttaagggacggagggagta 761811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 14378605 - 14378487
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  14378605 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 14378506  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  14378505 ttaagggacggagggagta 14378487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 27302005 - 27302123
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||||||||| |||| |||||| |||||| ||| |||  ||    
T  27302005 aaaatattaaattttcataattttttataatatattattcaagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaattgtatcatgta 27302104  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| |||||  ||||||||    
T  27302105 ttatgggacggagggagta 27302123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 29616240 - 29616126
Alignment:
Q  8 tatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaa 107  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |  ||| |||||| | |||||||| |||  |||||     
T  29616240 tatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtcatgtattat 29616141  T
Q  108 gggacaaagggagta 122  Q
    |||||  ||||||||    
T  29616140 gggacggagggagta 29616126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 40645837 - 40645943
Alignment:
Q  16 tttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaa 115  Q
    |||||||| ||||||||||| ||||||||| |||||||||||| || |||||||||| |||| ||||||||||||| ||| | || ||||| ||||| ||    
T  40645837 tttcataattttttctaatatattattcaagatatttaagctcgaagttatgcattgacatgcgtaataaggtcaattgtgttaagtattatgggacgaa 40645936  T
Q  116 gggagta 122  Q
    |||||||    
T  40645937 gggagta 40645943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 43049187 - 43049069
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  43049187 aaaatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcattta 43049088  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||| ||  ||||||||    
T  43049087 ttaaggtacggagggagta 43049069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 44039965 - 44040059
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||||||| ||||||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||  ||| |||||| ||||||||||    
T  44039965 tttaaaatatcaatttttcataattttttataatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgt 44040059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 44871474 - 44871564
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactg 94  Q
    ||||||| |||||||||||| ||||||||| | ||||||||| |||||||| ||||||||||||||||| ||||| ||||| |||||||||    
T  44871474 aaaatataaaattttcataattttttctaacatattattcaaaatatttaaactcaaaattatgcattgacatgtataatagggtcaactg 44871564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 44887633 - 44887515
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||| ||||||| ||||||||||||||||||  ||| |||||| |||||||||| |||  ||    
T  44887633 aaaatatcaatttttcataattttttataatatattattcaagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcattta 44887534  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| |||||  ||||||||    
T  44887533 ttatgggacggagggagta 44887515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 67241 - 67346
Alignment:
Q  7 atatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatta 106  Q
    ||||||||| ||||||| ||||||  ||| ||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||| | |||| |||||    
T  67241 atatcaaatattcataattttttcatatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactatgtcaagtatta 67340  T
Q  107 agggac 112  Q
     |||||    
T  67341 tgggac 67346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 4960294 - 4960412
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||| ||||  ||| |||||   ||||||||| | |  ||    
T  4960294 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgtattggaatgcgtaatggagtcaactgtattatgta 4960393  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||| ||||||||    
T  4960394 ttaagggacagagggagta 4960412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 11756921 - 11757039
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||| ||||||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  11756921 aaaatatcaaattttcatgattttttctaacatattattcaagatattcaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgta 11757020  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  11757021 ttaagggacggagggagta 11757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 38842306 - 38842424
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  38842306 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcactta 38842405  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  38842406 ttaagggacggagggagta 38842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 44362064 - 44362182
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||||| | |||  ||    
T  44362064 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactttgtcatgta 44362163  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  44362164 ttaagggacggagggagta 44362182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 23547211 - 23547316
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||| | ||||||||| |||  ||    
T  23547211 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaagtcaactgtgtcactta 23547310  T
Q  104 ttaagg 109  Q
    ||||||    
T  23547311 ttaagg 23547316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23849755 - 23849826
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||||||||||| ||||||||||| |||||| || ||||||||| |||| |||||||||||    
T  23849755 tttaaaatatcaaattttcataattttttctaataaattattaaagatatttaagttcaatattatgcattg 23849826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 25866212 - 25866291
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaat 83  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||| ||||  |||||||||    
T  25866212 aaaatatcaaattttcattattttttctaacatattattcaagatatttaagctcaaaattatgaattggaatgtgtaat 25866291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 30464575 - 30464694
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||  |||||||||| |||  ||    
T  30464575 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacacattgatatgcgtaatttggtcaactgtgtcactta 30464674  T
Q  104 ttaagggacaaagggagtac 123  Q
    |||||||||  |||||||||    
T  30464675 ttaagggacggagggagtac 30464694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 30653503 - 30653606
Alignment:
Q  4 aaaatatcaaattttcataaatttt-tctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| |||| ||||||| |||||| || |||||||| || |||||||||||||| ||||  |||||||||||||| | ||| ||    
T  30653503 aaaatatcaaattttcataagttttttctaatatattatttaagatatttaatctgaaaattatgcattgacatgcttaataaggtcaactatgtcatat 30653602  T
Q  103 atta 106  Q
    ||||    
T  30653603 atta 30653606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 8123781 - 8123883
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||  ||||||||| | ||||||||| || | ||| ||||||||||||||||| ||||  |||||||||||| ||| |||| ||    
T  8123781 aaaatatcaaattttcatatttttttctaacatattattcaagatttataatctcaaaattatgcattgacatgcataataaggtcaaatgtgtcaagta 8123880  T
Q  104 tta 106  Q
    |||    
T  8123881 tta 8123883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 15870318 - 15870436
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  |||  ||||  ||||||||   |||| ||    
T  15870318 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcataattgggtcaactagatcaatta 15870417  T
Q  104 ttaagggacaaagggagta 122  Q
    |||| |||| |||||||||    
T  15870418 ttaaaggacgaagggagta 15870436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 29708704 - 29708830
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||   |||||||   |||  ||    
T  29708704 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactaggtcactta 29708803  T
Q  104 ttaagggacaaagggagtactctttta 130  Q
    |||||||||  ||||||||| ||||||    
T  29708804 ttaagggacggagggagtaccctttta 29708830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 5777472 - 5777411
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatta 65  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||    
T  5777472 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaaatta 5777411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 37094275 - 37094392
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||| ||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||  |||||   ||||||||| |||  ||    
T  37094275 aaaatatcaaatttccatgattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtcattta 37094374  T
Q  104 ttaagggacaaagggagt 121  Q
    |||||||||  |||||||    
T  37094375 ttaagggacggagggagt 37094392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 23437731 - 23437663
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  23437731 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 23437663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 14583840 - 14583721
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||| | ||||| |||| | |||||| || ||||||||||||||||||||||||||  ||| ||||||  ||||||| | |||  |    
T  14583840 aaaatatcaaattttcatgatttttttctaacatattattaaagatatttaagctcaaaattatgcattggaatgcgtaatagagtcaactatgtcatgt 14583741  T
Q  103 attaagggacaaagggagta 122  Q
    ||||||||||  ||||||||    
T  14583740 attaagggacggagggagta 14583721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 17523958 - 17524033
Alignment:
Q  16 tttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    |||||||| | ||| ||||| ||||||||| |||||||||||||||||||||||||| |||| |||||||| ||||    
T  17523958 tttcataattatttttaatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataagatcaa 17524033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 28583217 - 28583102
Alignment:
Q  7 atatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatta 106  Q
    ||||||||||||||||| ||| || |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||   |||||||||| |||  |||||    
T  28583217 atatcaaattttcataattttctccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaactgggtcaactgtgtcatgtatta 28583118  T
Q  107 agggacaaagggagta 122  Q
    ||||||  ||||||||    
T  28583117 agggacggagggagta 28583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 42150068 - 42150001
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| |||||    
T  42150068 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcatt 42150001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 44020966 - 44020880
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |||||||| |||||| ||||||||| | ||| ||||||| |||||    
T  44020966 aaaatatcaaattttcatat-tttttctaatatattattcaagatatttaaactcaaagttatgcattataatgcgtaataaagtcaa 44020880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 3466453 - 3466547
Alignment:
Q  28 ttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||| |||   |||||||| ||||||| |||| ||||| || ||| ||||||||    
T  3466453 ttctaatatattattcaagatatttaagctcaaagttatgcattgacatacataataaggccaactgtgtcaagtattatggaacagagggagta 3466547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 11538833 - 11538950
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | || || ||| ||||||||||||||||||||||||||  |||||||||   ||||||| | |||  ||    
T  11538833 aaaatatcaaattttcatgattttttctaacatataat-caagatatttaagctcaaaattatgcattggaatgtgtaatggagtcaactatgtcatgta 11538931  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  11538932 ttaagggacggagggagta 11538950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 25009287 - 25009348
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatta 65  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||    
T  25009287 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaatta 25009348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40035427 - 40035532
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||| |||||||||||| ||||  ||| | ||||||||| ||||||||||| ||||||||| |||| ||||| ||||| | |||||| | |||     
T  40035427 tttaaaatatgaaattttcataatttttaataacatattattcaagatatttaagctgaaaattatgtattgacatgtataataggatcaactatgtcat 40035526  T
Q  101 atatta 106  Q
    ||||||    
T  40035527 atatta 40035532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 4327033 - 4326933
Alignment:
Q  8 tatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaa 107  Q
    |||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||  |||||||||| |||  ||||||    
T  4327033 tatcaaattttcataattttttccaatatattattcaaaatatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtcacttattaa 4326934  T
Q  108 g 108  Q
    |    
T  4326933 g 4326933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 18419141 - 18419209
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||| ||||||||||| |||||    
T  18419141 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaatctcaaaattatacattg 18419209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 36632111 - 36632034
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaa 82  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||| |||||||  |||||||||||| |||| |||||||||    
T  36632111 aaaatatcaatttttcataatttttt-taatatattattcaagatatttacactcaaaattatgtattgacatgtgtaa 36632034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 44947188 - 44947266
Alignment:
Q  44 aatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    |||||||||||||||||||||||||||||  ||| |||||| |||||||||| |||  ||||| |||||  ||||||||    
T  44947188 aatatatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggagggagta 44947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 8058486 - 8058405
Alignment:
Q  41 ttcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    ||||| ||||||||  ||||||||||| |||| |||| |||||||||| |||||| |||| ||||| ||||| |||||||||    
T  8058486 ttcaaaatatttaaattcaaaattatgtattggcatgcgtaataaggttaactgtgtcaagtattatgggacgaagggagta 8058405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 25691515 - 25691454
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatta 65  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| ||||||||||    
T  25691515 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaatta 25691454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 16345320 - 16345409
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    ||||||||||||||| |||  ||||||||||| |||| | ||  |||||||| |||||||| |||||||  |||||| | ||||||||||    
T  16345320 aaaatatcaaatttttatagttttttctaatagattagtaaaattatttaagatcaaaattgtgcattgatatgtgtgacaaggtcaact 16345409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32061222 - 32061157
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattat 66  Q
    ||||| ||||||| ||||||||| ||||||||||| |||||| || ||||||||| ||||| ||||    
T  32061222 tttaacatatcaatttttcataattttttctaataaattattaaaaatatttaagatcaaagttat 32061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14400907 - 14400983
Alignment:
Q  1 tttaaaatatcaaattttcataaatttt-tctaatacattattcaatatatttaagctcaaaattatgcattgtcat 76  Q
    |||||||||| |||||||||| | |||| ||||||| | |||| || ||||||| | ||||||||||||||||||||    
T  14400907 tttaaaatataaaattttcatgatttttttctaatagactattaaagatatttaggatcaaaattatgcattgtcat 14400983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1226644 - 1226706
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||||||||| |||||||||| |||||||||| || |||||| || ||||||||| ||||||||    
T  1226644 tttaaaatattaaattttcat-aatttttctattagattattaaagatatttaagttcaaaatt 1226706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 2026715 - 2026802
Alignment:
Q  4 aaaatatcaaattttcataaatttt-tctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    ||||||||||||||| |||| |||| ||||||| |||||| || |||||||| || |||||||| ||||  ||||  ||||||||||||    
T  2026715 aaaatatcaaatttt-ataatttttttctaatatattatttaagatatttaaacttaaaattatacattagcatgcataataaggtcaa 2026802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 13888548 - 13888480
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||| | |||| ||||||||||| |||| | ||  |||||||| |||||||| |||||||    
T  13888548 aaaatatcaaattattataattttttctaatagattagtaaagttatttaagatcaaaattgtgcattg 13888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 1334214 - 1334112
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| ||||||||||| |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  1334214 aaaatatcaaatttttataattttttctaatatattatttaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtatcaaata 1334115  T
Q  104 tta 106  Q
    |||    
T  1334114 tta 1334112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 10228645 - 10228527
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  10228645 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 10228546  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  10228545 ttaagggacggagggagta 10228527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 9997796 - 9997678
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  9997796 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 9997697  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  9997696 ttaagggacggagggagta 9997678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 36594335 - 36594229
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |    
T  36594335 aaaatatcaaattttcataatttttttctaatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaggtcaactgtgtcaagt 36594236  T
Q  103 attaagg 109  Q
    |||||||    
T  36594235 attaagg 36594229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 44821450 - 44821342
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||| ||| |||| ||    
T  44821450 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatatgtaataaggtcaattgtgtcaagta 44821351  T
Q  104 ttaagggac 112  Q
    |||| ||||    
T  44821350 ttaaaggac 44821342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 10106300 - 10106182
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||| ||||||||| |||| ||    
T  10106300 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagta 10106201  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  10106200 ttaagggacggagggagta 10106182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 10232401 - 10232283
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||| ||||||||| |||| ||    
T  10232401 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtcaagta 10232302  T
Q  104 ttaagggacaaagggagta 122  Q
    |||| ||||  ||||||||    
T  10232301 ttaaaggacggagggagta 10232283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 32961386 - 32961497
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||| |||||||||||| ||||||||| | ||||||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||| ||      
T  32961386 tttaaaatatgaaattttcataattttttctaacatattattcaaaatatttaaactcaaaattatgcattgacatgcgtaatagggtcaactgtatcgt 32961485  T
Q  101 atattaagggac 112  Q
    |||||| |||||    
T  32961486 atattatgggac 32961497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 33462848 - 33462939
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||  ||||| ||||||||||    
T  33462848 aaaatatcaaattttcataattttttcttatatattattcaagatatttaagctcaaaattatgcattggcatgcataatagggtcaactgt 33462939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4465021 - 4465092
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  4465021 tttaaaatatcaaattttcataactttttctaacatattattcaagatatttaagctcaaaattatgcattg 4465092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 43394475 - 43394384
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||| |||| || ||| |||| |||||    
T  43394475 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatccattggcatgcgtgatagggtccactgt 43394384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 47070165 - 47070272
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| |||||| |||||||||||||| ||| |||| ||||| |||| |||||||| |||| ||| |||||||    
T  47070165 aaaatatcaaattttcataattttttcaaatatattatttaatatatttaagctgaaagttatacattggcatgcgtaataagatcaagtgtgtcaaata 47070264  T
Q  104 ttaaggga 111  Q
    ||| ||||    
T  47070265 ttatggga 47070272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 47340000 - 47339909
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||| |||||||||||| ||||||||||| | ||||||| |||||||| |||||||||||||||||||||| |||| | ||||||||||    
T  47340000 aaaatattaaattttcataattttttctaatatactattcaagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgt 47339909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 16434773 - 16434655
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||  |||||  |||||||||| |||  ||    
T  16434773 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcactta 16434674  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||||||| |||||||||    
T  16434673 ttaagggacgaagggagta 16434655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 29793294 - 29793176
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| |||||| || |||||||| |||||||||||||||||  ||| |||||  ||| |||||| |||  ||    
T  29793294 aaaatatcaaattttcataattttttccaatatattatttaagatatttaaactcaaaattatgcattggtatgcgtaattgggttaactgtgtcactta 29793195  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||||||| |||||||||    
T  29793194 ttaagggacgaagggagta 29793176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 42098543 - 42098425
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  42098543 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 42098444  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  42098443 ttaagggacggagggagta 42098425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 49818897 - 49819018
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  |||  ||||   ||||||||| |||     
T  49818897 tttaaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcataatggagtcaactgtgtcat 49818996  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  49818997 gtattaagggacggagggagta 49819018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 901004 - 900896
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  901004 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaatttggtcaactgtgtcactta 900905  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  900904 ttaagggac 900896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 29720538 - 29720646
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  29720538 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 29720637  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  29720638 ttaagggac 29720646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 34263620 - 34263500
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  | |||||||| |||  ||    
T  34263620 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtatcactta 34263521  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  34263520 ttaagggacggagggagtact 34263500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 3817866 - 3817957
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||| ||||||| |||| ||||||||||| | ||||||| |||||||| |||||||||||||||||||||| |||| | ||||||||||    
T  3817866 aaaatattaaatttttataattttttctaatatactattcaagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgt 3817957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 18013386 - 18013319
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  18013386 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctctaaattatgcatt 18013319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 2643185 - 2643068
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||| | ||||||||| |||||||||||||||||||||||||| |||| |||||   ||||||| | |||  ||    
T  2643185 aaaatatcaaattttcataatttttt-taacatattattcaagatatttaagctcaaaattatgcattggcatgcgtaatggagtcaactatgtcatgta 2643087  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  2643086 ttaagggacggagggagta 2643068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 12948183 - 12948301
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||  ||| |||||  | |||||||| |||  ||    
T  12948183 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattggatcaactgtgtcactta 12948282  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  12948283 ttaagagacggagggagta 12948301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 44774342 - 44774253
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| ||||||||| | |||||||||  ||||||| ||| ||||||||||||| ||||||||||| | ||||||    
T  44774342 aaaatatcaaattttcataattttttctaacatattattcaaactatttaaactctaaattatgcattgacatgtgtaatatgatcaact 44774253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 4945767 - 4945699
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  4945767 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattg 4945699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 9281379 - 9281311
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| ||||||||||| |||||| || ||||||||| ||||||||||||||||    
T  9281379 aaaatatcaaattttcataattttttctaatagattattaaagatatttaagttcaaaattatgcattg 9281311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 34555294 - 34555414
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  |||  ||||  || ||||||| |||  ||    
T  34555294 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcataattgggccaactgtgtcactta 34555393  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  34555394 ttaagggacggagggagtact 34555414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 53019971 - 53020067
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||| |||| ||||  ||||| ||||||||| |||||||  |||||| |||||||||| |||| ||||||||||||||||| ||||    
T  53019971 aaaatatcaaatttttataatttttcataatatattattcaagatatttagtctcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaa 53020067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 29588518 - 29588585
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||||| || || ||||| ||||||||| |||||||||||||||||||||||||    
T  29588518 aaaatatcaaattttcataatttcttttaatatattattcaagatatttaagctcaaaattatgcatt 29588585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 36179052 - 36178985
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||| |||||    
T  36179052 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaaattacgcatt 36178985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 53055541 - 53055425
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||   ||  ||||||||  |||||| | |||||||    
T  53055541 aaaatatcaaattttcataattttttttaatatattattcaagatatttaagcttaaaattatgcatcagca--tgtaataacatcaactctgtcaaata 53055444  T
Q  104 ttaagggacaaagggagta 122  Q
    |||| ||||  ||||||||    
T  53055443 ttaaaggacggagggagta 53055425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 29455624 - 29455506
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||   |||||||||| |||  ||    
T  29455624 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcactta 29455525  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  29455524 ttaagggacggagggagta 29455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 34669748 - 34669870
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| ||||  |||||||| |||||||| |||||||||| ||||||  |||| ||||  | |||||||| |||     
T  34669748 tttaaaatatcaaattttcataattttttccaatatgttattcaagatatttaaactcaaaattacgcattgatatgtataattggatcaactgtgtcac 34669847  T
Q  101 atattaagggacaaagggagtac 123  Q
     |||||| ||||  |||||||||    
T  34669848 ttattaaaggacggagggagtac 34669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 46866486 - 46866604
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||| ||| |||  ||    
T  46866486 aaaatatcaaattttcataatttttttcaatatattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaattgtatcactta 46866585  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  46866586 ttaagggacggagggagta 46866604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 9484739 - 9484828
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||    
T  9484739 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 9484828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 49076342 - 49076253
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||    
T  49076342 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 49076253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 53274911 - 53274822
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||    
T  53274911 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaact 53274822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 1778504 - 1778572
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | |||||| || ||||||||||||||||||||||||||    
T  1778504 aaaatatcaaattttcatgattttttctaacatattatttaagatatttaagctcaaaattatgcattg 1778572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 4229104 - 4229036
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||| |||| ||||||||| | ||||||||| |||||||| |||||||||||||||||    
T  4229104 aaaatatcaaatttttataattttttctaacatattattcaagatatttaaactcaaaattatgcattg 4229036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 29809487 - 29809595
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||| ||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   || |||||| |||  ||    
T  29809487 aaaatatcaaattttcatgattttttataacatattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagttaactgtgtcatgta 29809586  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  29809587 ttaagggac 29809595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 36364679 - 36364611
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||||||||||||||| |||||    
T  36364679 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatacattg 36364611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 38878394 - 38878326
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  38878394 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 38878326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 48927718 - 48927650
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  48927718 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 48927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 50673817 - 50673888
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  50673817 tttaaaatatcaaattttcataatcttttccaatatattattcaagatatttaaactcaaaattacgcattg 50673888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 14750976 - 14750858
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||   | |||||||| |||  ||    
T  14750976 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaactggatcaactgtgtcatgta 14750877  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  14750876 ttaagggacggagggagta 14750858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 29444969 - 29444851
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| ||||||||  ||||||||| ||||||  || ||||||  |||||||||| |||  ||    
T  29444969 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaattcaaaattacgcattggtatatgtaatttggtcaactgtgtcactta 29444870  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  29444869 ttaagagacggagggagta 29444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 43398966 - 43399060
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| |||  ||||||||| |||||| || |||||||| |||||||||||| ||||  ||| |||||| | ||||||||    
T  43398966 tttaaaatatcaaattttcaaaaaaatttctaatatattatttaagatatttaaactcaaaattatgtattgatatgcgtaataggatcaactgt 43399060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 26759622 - 26759683
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattat 66  Q
    ||||||||||||||||||| ||||||||| | ||||||||| |||||||| |||||||||||    
T  26759622 aaatatcaaattttcataattttttctaacatattattcaagatatttaaactcaaaattat 26759683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 12250446 - 12250514
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||| |||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
T  12250446 aaaatatcaaatttttataattttttccaatatattattcaagatatttaaactcaaaattacgcattg 12250514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23591270 - 23591203
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgca 69  Q
    ||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||  |||||||||||||    
T  23591270 tttaaaatatcaaattttcataatttttt-taataaattattaaatatatttaaaatcaaaattatgca 23591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 52094010 - 52093930
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaata 84  Q
    ||||||||||||||| |||| ||||| ||| | ||||||| | |||||||||||||||||||||||||  |||| ||||||    
T  52094010 aaaatatcaaatttttataattttttataacatattattcgagatatttaagctcaaaattatgcattagcatgcgtaata 52093930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4016605 - 4016668
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    ||||||||||||||||||||||| ||||||||||| |||||| || ||||||||| | ||||||    
T  4016605 tttaaaatatcaaattttcataattttttctaatagattattaaagatatttaagtttaaaatt 4016668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 28958915 - 28958848
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||  | ||||||||| | ||||||||| |||||||| ||||||||||||||||    
T  28958915 aaaatatcaaattttcaagattttttctaacatattattcaagatatttaaactcaaaattatgcatt 28958848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 34680324 - 34680443
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||| | ||||| |||| |  |||||||| |||||||||||||||||||| |||||  ||  ||||||  ||||||||| |||  |    
T  34680324 aaaatatcaaattttcatgatttttttctaacattttattcaagatatttaagctcaaaattatacattggaatacgtaatagagtcaactgtgtcatgt 34680423  T
Q  103 attaagggacaaagggagta 122  Q
    ||||||||||  ||||||||    
T  34680424 attaagggacggagggagta 34680443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37166619 - 37166710
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaac 92  Q
    |||||||||||||||||| |||| ||||||||| | |||| | ||  |||||||| |||||||||| |||||  |||||||| |||||||||    
T  37166619 tttaaaatatcaaatttttataattttttctaagagattaataaagttatttaagatcaaaattattcattgatatgtgtaacaaggtcaac 37166710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43170114 - 43170185
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||||||||||| || || ||| | ||||||||| |||| ||| |||||||||||||||||    
T  43170114 tttaaaatatcaaattttcataatttcttttaaaatattattcaagatatctaaactcaaaattatgcattg 43170185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 22755831 - 22755889
Alignment:
Q  6 aatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||||||||||||||||| ||||||||||| ||| ||||| ||||||||| ||||||||    
T  22755831 aatatcaaattttcataattttttctaatagattgttcaagatatttaagatcaaaatt 22755889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23591538 - 23591469
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||| |||| ||||| ||||| |||||| |||||||||||  |||||||||||||||    
T  23591538 tttaaaatatcaaattttaataatttttt-taataaattattaaatatatttaaaatcaaaattatgcatt 23591469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40415062 - 40415135
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaataca--ttattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||||||||||||| ||||||||||| |  ||||| || ||||||||| | ||||||||||||||    
T  40415062 tttaaaatatcaaattttcataattttttctaatatattttattaaagatatttaagtttaaaattatgcattg 40415135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5852578 - 5852513
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattat 66  Q
    |||||| ||||||||||| |||| ||||||||||| |||||| || ||||||||| ||||||||||    
T  5852578 tttaaattatcaaatttttataattttttctaatagattattaaagatatttaagatcaaaattat 5852513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 20144838 - 20144770
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||| | | || ||||||||| |||||||| |||||||||| ||||||    
T  20144838 aaaatatcaaattttcataatttttgccactatattattcaagatatttaaactcaaaattacgcattg 20144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 38833629 - 38833521
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||| ||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| |||||   ||||||||   |||||||| | |||  ||    
T  38833629 aaaataacaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattaatatgtgtaaatgggtcaactatgtcactta 38833530  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  38833529 ttaagggac 38833521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 49220616 - 49220704
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||| ||||| |||| | ||| | ||| ||||||||| |||||||| ||||||||||| ||||  |||| |||||||||||||||    
T  49220616 aaatatcatatttttataattatttatcatatattattcaagatatttaacctcaaaattatacatttgcatgcgtaataaggtcaact 49220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 31440524 - 31440461
Alignment:
Q  28 ttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||| || | |||||||| ||||    
T  31440524 ttctaatatattattcaagatatttaagctctaaattatgcattgacacgcgtaataagatcaa 31440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 43370434 - 43370485
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaag 55  Q
    ||||||| |||||||||||| ||||||||||| ||||||||| |||||||||    
T  43370434 aaaatattaaattttcataattttttctaatatattattcaagatatttaag 43370485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 28389172 - 28389070
Alignment:
Q  20 ataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaaggga 119  Q
    |||| ||||||||||| |||||| || ||||||||| | ||| || ||||||| ||| |||||| | ||||| ||| ||||||| || |||||||| |||    
T  28389172 ataattttttctaatagattattaaagatatttaagattaaagttgtgcattgacatatgtaatgaagtcaattgtgtcaaataatatgggacaaatgga 28389073  T
Q  120 gta 122  Q
    |||    
T  28389072 gta 28389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 45516962 - 45516895
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    ||||||| |||| ||||||  ||||||||||| |||||| || ||||||||| |||||||||| ||||    
T  45516962 aaaatattaaatattcatatttttttctaataaattatttaaaatatttaagatcaaaattatacatt 45516895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9794315 - 9794409
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||||| ||||||||| | ||||||||||| || ||| || ||||| ||| | |||||||| |||||  |||||| |||  |||||||||    
T  9794315 tttaaaatatcgaattttcattattttttctaatagataattgaagatattaaagataaaaattattcattgatatgtgtgatagagtcaactgt 9794409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23631504 - 23631410
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||| |||| ||||| ||||| || | | ||  |||||||| |||||||| || ||||  |||||| | ||||||||||||    
T  23631504 tttaaaatatcaaatttttataattttttataatagataagtaaagttatttaagatcaaaattgtgtattgatatgtgtgacaaggtcaactgt 23631410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 40732688 - 40732745
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaa 61  Q
    ||||||||||||||| |||| ||||  |||||||| |||||| ||||||||| |||||    
T  40732688 aaaatatcaaattttaataatttttgttaatacataattcaaaatatttaagatcaaa 40732745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 39557499 - 39557434
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    ||||||||||||||||||||  |||| ||||| |||||| || ||||||||  |||||||||| ||||    
T  39557499 aaaatatcaaattttcataa--ttttttaatatattattaaagatatttaaaatcaaaattatacatt 39557434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 5117359 - 5117241
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||||| |||| ||    
T  5117359 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataagttcaactgtgtcaagta 5117260  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  5117259 ttaagggacggagggagta 5117241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 44963597 - 44963479
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||| ||||||||||||||| | |||| ||    
T  44963597 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagta 44963498  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  44963497 ttaagggacggagggagta 44963479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 52688674 - 52688776
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||| |||| ||    
T  52688674 aaaatatcaaattttcataattttttctaatatattattcaatatatttaagctcaaagttatgcattgacatgtataataaggtcaattgtgtcaagta 52688773  T
Q  104 tta 106  Q
    |||    
T  52688774 tta 52688776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 43453090 - 43452983
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| |||| ||    
T  43453090 aaaatatcaaatttttataattttttctaatatattattcaagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtcaagta 43452991  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  43452990 ttaaggga 43452983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 47912421 - 47912542
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| |||  |||    
T  47912421 tttaaaatatcaaattttcataattttttataatatattattcaaaatatttaagctcaaaattatgcattgacatacgtaataaggtcaattgtggcaa 47912520  T
Q  101 atattaagggacaaagggagta 122  Q
     ||||| |||||  ||||||||    
T  47912521 gtattatgggacggagggagta 47912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 23393375 - 23393495
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||| |||| |||||   ||||||||| |||  ||    
T  23393375 aaaatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattggcatgcgtaattgagtcaactgtgtcattta 23393474  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  23393475 ttaagggacggagggagtact 23393495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 40058892 - 40058773
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| |||||||||  ||||||| |||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  40058892 aaaatatcaaattttcataattttttctaatatattattcaaagtatttaaactcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagta 40058793  T
Q  104 ttaagggacaaagggagtac 123  Q
    ||| | |||  |||||||||    
T  40058792 ttatgagacggagggagtac 40058773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48312168 - 48312279
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||  ||||||||| |||||| | ||    
T  48312168 tttaatatatcaaattttcataattttttctaatatattattcaaaatatttaagctcaaaattatgcattgacatgcataataaggtaaactgtgttaa 48312267  T
Q  101 atattaagggac 112  Q
     ||||| |||||    
T  48312268 gtattatgggac 48312279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 8250768 - 8250650
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||  ||  ||||| ||||||||||| |||  ||    
T  8250768 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaaattatgcattggtatacgtaattaggtcaactgtgtcactta 8250669  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  8250668 ttaagggacggagggagta 8250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 26476934 - 26476816
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| |||||||| |||||||||||| |||| |||| ||||||||||||||||| |||| ||    
T  26476934 aaaatatcaaattttcataatttttcataatatattattcaagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtcaagta 26476835  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||| ||  ||||||||    
T  26476834 ttaaggaacggagggagta 26476816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25815668 - 25815779
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||| |||||||| |||||||||||||||||  ||  |||||||| |||||||| ||||    
T  25815668 tttaaaatatcaaatttttataattttttctaatatactattcaagatatttaacctcaaaattatgcattgagatacgtaataagatcaactgtgtcaa 25815767  T
Q  101 atattaagggac 112  Q
     |||||||||||    
T  25815768 ctattaagggac 25815779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 10100438 - 10100320
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||| ||||||||||| |||  ||    
T  10100438 aaaatatcaaattttcataattttttccaatatattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattaggtcaactgtgtcactta 10100339  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  10100338 ttaagggacggagggagta 10100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 31651826 - 31651708
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||  ||| |||||| |||||||||| |||  ||    
T  31651826 aaaatatcaatttttcataattttttataatatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcattta 31651727  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| |||||  ||||||||    
T  31651726 ttatgggacggagggagta 31651708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 49903610 - 49903496
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||| ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||| |||  |||| ||||||| ||||||| | |||||||    
T  49903610 aaaatatcaa-ttttcataattttttctaatatattattcaagatatgtaagctcaaaattatgaatttgcatgcgtaataaagtcaactatatcaaata 49903512  T
Q  104 ttaagggacaaaggga 119  Q
    ||| ||||| ||||||    
T  49903511 ttatgggacgaaggga 49903496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 5606316 - 5606198
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  5606316 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattaagcattggtatgcgtaattgggtcaactgtgtcactta 5606217  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  5606216 ttaagggacggagggagta 5606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 10648126 - 10648006
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||| || |   ||  ||||||||||||||||| ||||    
T  10648126 tttaaaatatcaaattttcataattttttttaatatattattcaagatatttaaactcaaaattataca-taaaatacgtaataaggtcaactgtgtcaa 10648028  T
Q  101 atattaagggacaaagggagta 122  Q
     ||||| |||| ||||||||||    
T  10648027 gtattatgggataaagggagta 10648006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 12685821 - 12685752
Alignment:
Q  37 attattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatta 106  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  12685821 attattcaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtgtcaagtatta 12685752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 4489204 - 4489272
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  4489204 aaaatatcaaattttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattg 4489272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 7075255 - 7075147
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  7075255 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtcactta 7075156  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  7075155 ttaagggac 7075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 41414346 - 41414453
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||  |||||   ||||||||| ||| |||    
T  41414346 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactgtgtcatata 41414445  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  41414446 ttaaggga 41414453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 44741486 - 44741605
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  | |||||||| |||  ||    
T  44741486 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactgtgtcactta 44741585  T
Q  104 ttaagggacaaagggagtac 123  Q
    |||||||||  |||||||||    
T  44741586 ttaagggacggagggagtac 44741605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 8048673 - 8048555
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||||||||||| |||||||||  ||| |||||   ||||||||| |||  ||    
T  8048673 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaaatatgcattggaatgcgtaatggagtcaactgtgtcatgta 8048574  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  8048573 ttaagggacggagggagta 8048555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 10124252 - 10124370
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||   ||||||||| |||  ||    
T  10124252 aaaatatcaaattttcataattttttccaatatattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattgagtcaactgtgtcactta 10124351  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  10124352 ttaagggacggagggagta 10124370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23337947 - 23338040
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||| |||||||||||| |||||  |||| ||||||||| |||||||| ||||||||||||||||| |||| |||||| ||||||||||    
T  23337947 tttaaaatatgaaattttcataatttttta-aatatattattcaagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaactgt 23338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 44240662 - 44240780
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| || | ||||||||| | ||||||||||||||||||||||||||||||||||||  ||| |||||   ||| ||||| |||  ||    
T  44240662 aaaatatcaaatttttatgattttttctaacatattattcaatatatttaagctcaaaattatgcattgaaatgcgtaattgagtccactgtgtcattta 44240761  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  44240762 ttaagggacggagggagta 44240780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 5945908 - 5945997
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||| |||||||||    
T  5945908 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaact 5945997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38786874 - 38786753
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||| ||||||||| ||||||||||| |||||| || |||||||| |||||||||||| ||||  ||| |||||| |||||| ||| |||     
T  38786874 tttaaaatatcaatttttcataattttttctaatatattattaaagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtcat 38786775  T
Q  101 atattaagggacaaagggagta 122  Q
     ||||| |||||  ||||||||    
T  38786774 gtattatgggacggagggagta 38786753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 52749424 - 52749513
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  |||||||||  ||||||||    
T  52749424 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgtgtaattgggtcaact 52749513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 1821553 - 1821486
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  1821553 aaaatatcaaattttcgtaa-tttttctaatatattattcaagatatttaagctcaaaattatgcattg 1821486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 28490303 - 28490371
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  28490303 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattg 28490371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 52141975 - 52141871
Alignment:
Q  7 atatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatta 106  Q
    |||| |||||||||||| | ||||||||| ||||||||| |||||| | ||||||| ||||||||| ||||  |||||||||||||||| ||| ||||||    
T  52141975 atataaaattttcataattgtttctaatatattattcaagatatttcaactcaaaaatatgcattggcatgcataataaggtcaactgtgtcagatatta 52141876  T
Q  107 aggga 111  Q
     ||||    
T  52141875 tggga 52141871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 33526087 - 33525997
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||  || | ||||||||||||||||    
T  33526087 aaaataacaaattttcataattttttctaatatattattcaa-atatttaaactcaaaattatgtattggtatatataataaggtcaactgt 33525997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 48613999 - 48613898
Alignment:
Q  12 aaattttcataaatttttctaatacatt--attcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagg 109  Q
    |||||||||||| ||||||||||| |||  |||||| |||||||||||||||||||| ||||| |||| |||||||||| |||||| |||| ||||| ||    
T  48613999 aaattttcataa-tttttctaatatattttattcaagatatttaagctcaaaattatacattgacatgcgtaataaggttaactgtatcaagtattatgg 48613901  T
Q  110 gac 112  Q
    |||    
T  48613900 gac 48613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 31932103 - 31931986
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| ||| | ||||||||| ||||||||||||||||||||| |||| |||| ||||||   |||||||| |||  ||    
T  31932103 aaaatatcaaattttcataatttttt-taacatattattcaagatatttaagctcaaaattatgtattggcatgcgtaatagaatcaactgtgtcatgta 31932005  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||| ||  ||||||||    
T  31932004 ttaaggaacggagggagta 31931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 41855646 - 41855529
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||| ||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  41855646 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaag-tcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcattta 41855548  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  41855547 ttaagggacggagggagta 41855529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 9334524 - 9334632
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||| ||||| ||||||||||||||||||||||| |   ||| ||||| | ||||||||| |||  ||    
T  9334524 aaaatatcaaattttcatgattttttctaacatatttttcaaaatatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgta 9334623  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  9334624 ttaagggac 9334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 9358297 - 9358405
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||| ||||| ||||||||||||||||||||||| |   ||| ||||| | ||||||||| |||  ||    
T  9358297 aaaatatcaaattttcatgattttttctaacatatttttcaaaatatttaagctcaaaattatgcagtaaaatgcgtaatgaagtcaactgtgtcatgta 9358396  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  9358397 ttaagggac 9358405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 44452338 - 44452426
Alignment:
Q  4 aaaatatcaaattttcataaatttttct-aatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    |||||||||| |||||||| |||||| | |||| ||||| ||| |||||||||||||||||||||||||  |||| |||||||||||||    
T  44452338 aaaatatcaatttttcatatattttttttaatatattatccaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaa 44452426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 31745884 - 31745971
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaa 91  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||||| || ||||||||| |||| |||  ||||||| |||||    
T  31745884 aaaatatcaaattttcataattttttataatatattattcaagatatttaacctaaaaattatggattgacattcgtaataaagtcaa 31745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 40883554 - 40883620
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||||| |||||||||||||||    
T  40883554 aaaatatcaaattttcataatttttt-taatatattattcaagatatttaagttcaaaattatgcatt 40883620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 50014486 - 50014368
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||| |||| ||||||||||||  || ||||||   |||| |||| |||  ||    
T  50014486 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaaactcagaattatgcattggaatatgtaatggagtcacctgtgtcatgta 50014387  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  50014386 ttaagggacggagggagta 50014368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 3138735 - 3138808
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatg 77  Q
    |||||||||||||||||||| |||||||| || ||||||||| ||||||||| | ||||||||| |||| ||||    
T  3138735 aaaatatcaaattttcataattttttctagtatattattcaagatatttaagtttaaaattatgtattgacatg 3138808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 45299461 - 45299570
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||| ||||||||| ||||| | |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  |    
T  45299461 aaaatatcaagttttcataatttttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactt 45299560  T
Q  103 attaagggac 112  Q
    ||||||||||    
T  45299561 attaagggac 45299570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 6017374 - 6017306
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| || | ||||||||| |||||||| |||||||||| ||||||    
T  6017374 aaaatatcaaattttcataattttttccaaaatattattcaagatatttaaactcaaaattacgcattg 6017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 2138954 - 2138863
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||  ||||||||||    
T  2138954 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgt 2138863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2126795 - 2126865
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||||| |||| ||||||||||| || ||| || ||||||||| | |||||||||||||    
T  2126795 tttaaaatatcaaatttttataattttttctaatatataatttaaaatatttaagtttaaaattatgcatt 2126865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 36035829 - 36035890
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatta 65  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| || |||||||    
T  36035829 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaacttaaaatta 36035890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33730123 - 33730054
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    ||||||||||||  ||||||||| ||||| ||||| ||||||||| |||||||| || ||||||||||||||    
T  33730123 tttaaaatatca--ttttcataattttttttaatatattattcaagatatttaaacttaaaattatgcattg 33730054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 48389209 - 48389273
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatg 67  Q
    |||||||||||||||||| | ||||| |||| | ||||||||| |||||||||||||||||||||    
T  48389209 aaaatatcaaattttcatgatttttttctaacatattattcaagatatttaagctcaaaattatg 48389273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8980814 - 8980877
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    ||||||| | ||||||||||||| ||||||||||| |||||| || ||||||||| ||||||||    
T  8980814 tttaaaaaaacaaattttcataattttttctaatagattattaaaaatatttaagttcaaaatt 8980877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 26345329 - 26345279
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaa 54  Q
    |||||||||||||||||||| ||||||||||| |||||| ||| |||||||    
T  26345329 aaaatatcaaattttcataattttttctaataaattattaaatgtatttaa 26345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42728771 - 42728847
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtg 79  Q
    |||||||||||||||||| |||||   || ||||| |||||| || ||||||||| |||||||||||||||||||||||    
T  42728771 tttaaaatatcaaatttt-ataaaaaatt-taatagattattaaagatatttaagatcaaaattatgcattgtcatgtg 42728847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 43452840 - 43452934
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||| |||| ||||||||| | |||| | ||  |||||||  | ||||||||| ||||  |||||| | ||||||||||||    
T  43452840 tttaaaatatcaaatttttataattttttctaaaagattagtgaagttatttaaaattaaaattatgtattggtatgtgtgacaaggtcaactgt 43452934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13971686 - 13971631
Alignment:
Q  1 tttaaaatatcaaattttcataa--atttttctaatacattattcaatatatttaa 54  Q
    |||||||||||||||||||||||   ||||||||||| |||||| || ||||||||    
T  13971686 tttaaaatatcaaattttcataattttttttctaatagattattaaagatatttaa 13971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 29253611 - 29253699
Alignment:
Q  35 acattattcaatatattt-aagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    ||||||||||| |||||| |||||||||||||||||||   ||| ||||| | ||||||||| |||  |||||||| ||  ||||||||    
T  29253611 acattattcaagatattttaagctcaaaattatgcattcaaatgcgtaatgaagtcaactgtgtcatgtattaaggaacggagggagta 29253699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 1615682 - 1615790
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||| |||| |||||||||| || ||| |||||||    
T  1615682 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggttaattgtgtcaaata 1615781  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  1615782 ttaagggac 1615790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 17492810 - 17492928
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||  |||||||||||||| |||||| |||| ||    
T  17492810 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgatatgtgtaataaggttaactgtgtcaagta 17492909  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  17492910 ttaagagacggagggagta 17492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 47834064 - 47833946
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||| |||| ||    
T  47834064 aaaatataaaattttcataattttttataatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaagtcaactgtgtcaagta 47833965  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||| ||||||||    
T  47833964 ttaagagacagagggagta 47833946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 2806090 - 2805973
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatat 104  Q
    ||||||||||||||||||| |||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||| |||| |||    
T  2806090 aaatatcaaattttcataatttttcctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtcaagtat 2805991  T
Q  105 taagggacaaagggagta 122  Q
    ||||||||  ||||||||    
T  2805990 taagggacggagggagta 2805973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11260842 - 11260953
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| ||||  ||||| ||||||||| |||||||||| ||||||||||||||| |||| |||||||| |||| ||| ||||    
T  11260842 tttaaaatatcaaattttcataatttttcttaatatattattcaagatatttaagcacaaaattatgcattgacatgcgtaataagatcaattgtgtcaa 11260941  T
Q  101 atattaagggac 112  Q
    ||||||||||||    
T  11260942 atattaagggac 11260953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 51716677 - 51716792
Alignment:
Q  7 atatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatatta 106  Q
    ||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||  ||||||| |||||| | ||||||||||    
T  51716677 atatcaaattttcataattttttataatatattattcaaaatatttaagctcaaaattatgcattgacatgcataataagctcaactatgtcaaatatta 51716776  T
Q  107 agggacaaagggagta 122  Q
    ||||||  ||||||||    
T  51716777 agggacggagggagta 51716792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 24505654 - 24505772
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| ||||| |||| |||| ||||||||||||||| | |||| ||    
T  24505654 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtcaagta 24505753  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  24505754 ttaagggacggagggagta 24505772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 29821193 - 29821301
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||| |||||| |||||||||| |||  ||    
T  29821193 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgta 29821292  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  29821293 ttatgggac 29821301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 4271934 - 4271816
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||| | ||| || |||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||| |||| ||    
T  4271934 aaaatatcaaattttcataattttttatgatatataattcaagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtcaagta 4271835  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| |||||  ||||||||    
T  4271834 ttatgggacggagggagta 4271816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 39260495 - 39260603
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| ||||||||  |||||||||||||||| |||| |||||||| |||| ||| |||| ||    
T  39260495 aaaatatcaaatttttataattttttctaatatattattcaagatatttaaattcaaaattatgcattgacatgcgtaataagatcaattgtgtcaagta 39260594  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  39260595 ttaagggac 39260603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28988317 - 28988196
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||||||| |||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||||||| |||     
T  28988317 tttaaaatatcaaaatttcataattttttctaacatattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcat 28988218  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  28988217 gtattaagggacggagggagta 28988196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 28898991 - 28898873
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  |||  ||||   ||||||||| ||| |||    
T  28898991 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattggaatgcataatggagtcaactgtatcatata 28898892  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  28898891 ttaagggacggagggagta 28898873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 39171101 - 39171219
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||| | ||||||  ||| ||||| ||||||||||| |||  ||    
T  39171101 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaatcacgcattggtatgcgtaattaggtcaactgtatcactta 39171200  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  39171201 ttaagggacggagggagta 39171219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 48079968 - 48079850
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| |||||| || ||||||||||||||| |||| ||||| |||| |||||||| |||| ||| |||| |     
T  48079968 aaaatatcaaattttcataatttttcctaatatattattgaagatatttaagctcaaagttatacattgacatgcgtaataagatcaaatgtgtcaagtt 48079869  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  48079868 ttaagggacggagggagta 48079850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 48380899 - 48381017
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  48380899 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 48380998  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  48380999 ttaagggacggagggagta 48381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 51306154 - 51306036
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||||||| |||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  51306154 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcattta 51306055  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||| ||||||||    
T  51306054 ttaagggacagagggagta 51306036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 55631795 - 55631677
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||  |||||  |||||||||| |||  ||    
T  55631795 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcactta 55631696  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||||||| |||||||||    
T  55631695 ttaagggacgaagggagta 55631677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 37164159 - 37164268
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| ||||| ||| || ||||||||| ||||||||||||||||||||||||||  ||| |||||| |||||||||| |||  |    
T  37164159 aaaatatcaaattttcataatttttttctattatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtcatgt 37164258  T
Q  103 attaagggac 112  Q
    |||| |||||    
T  37164259 attatgggac 37164268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 3708396 - 3708516
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||| |||||| |||  ||    
T  3708396 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggttaactgtgtcactta 3708495  T
Q  104 ttaagggacaaagggagtact 124  Q
    |||||||||  ||||||||||    
T  3708496 ttaagggacggagggagtact 3708516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 6520578 - 6520646
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  6520578 aaaatatcaaattttcatgattttttctaatatattattcaagatatttaagctcaaaattatgcattg 6520646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 28914511 - 28914619
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  28914511 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 28914610  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  28914611 ttaagggac 28914619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37588454 - 37588342
Alignment:
Q  1 tttaaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttca 99  Q
    |||||||||||||||||| |||  ||||| |||||| |||||| || |||||||||||||||||||||||||| |||| | |||||| |||||||| |||    
T  37588454 tttaaaatatcaaatttttatattttttttctaatatattattaaagatatttaagctcaaaattatgcattggcatgcgcaataagatcaactgtgtca 37588355  T
Q  100 aatattaagggac 112  Q
    | ||||| |||||    
T  37588354 agtattatgggac 37588342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 50685063 - 50685171
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||  ||||||||||| ||||||||| ||||||||| |||||||||| |||||  ||| |||||| |||||||||| |||| ||    
T  50685063 aaaatattaaattttcatatttttttctaatatattattcaaaatatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtcaagta 50685162  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  50685163 ttatgggac 50685171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 44210292 - 44210411
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   |||||| || |||  ||    
T  44210292 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaaccgtatcatgta 44210391  T
Q  104 ttaagggacaaagggagtac 123  Q
    |||||||||  |||||||||    
T  44210392 ttaagggacggagggagtac 44210411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1377948 - 1378058
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||||||||||||||   ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| |||||   ||||||||| |||     
T  1377948 tttaaaatatcaaattttcatggttttttctaacatattattcaagatatttaagctcaaaattatgcattggaatgcgtaatggagtcaactgtgtcat 1378047  T
Q  101 atattaaggga 111  Q
     ||||||||||    
T  1378048 gtattaaggga 1378058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 8525336 - 8525218
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||| || |||  ||    
T  8525336 aaaatatcaaattttcataattttttctaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaaccgtgtcactta 8525237  T
Q  104 ttaagggacaaagggagta 122  Q
    || ||||||  ||||||||    
T  8525236 ttcagggacggagggagta 8525218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 31152804 - 31152922
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| |||||||||||||||||| ||||||||||  |||||  ||| |||||  |||||||||| |||  ||    
T  31152804 aaaatatcaaattttcataatttttttcaatatattattcaatatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtcactta 31152903  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  31152904 ttaagggacggagggagta 31152922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 39376788 - 39376670
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| ||||||||||||||||| ||||||||  ||| |||||   ||||||||| |||  ||    
T  39376788 aaaatatcaaattttcatgattttttctaacatattattcaagatatttaagctcaaaatcatgcattgaaatgcgtaatggagtcaactgtatcatgta 39376689  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  39376688 ttaagggacggagggagta 39376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 40411528 - 40411410
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||   |||||||||| |||  ||    
T  40411528 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtatcactta 40411429  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  40411428 ttaagggacggagggagta 40411410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 43447308 - 43447426
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||   |||||||||| |||  ||    
T  43447308 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtcactta 43447407  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  43447408 ttaagggacggagggagta 43447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 52818610 - 52818544
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcat 70  Q
    ||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  52818610 aaaatattaaattttcataattttttctaatatattattcaagatatttaagctcaaaattatgcat 52818544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29424786 - 29424891
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||  || ||||||||||||||||| ||||  ||| | ||||| |||||||||| |||     
T  29424786 tttaaaatattaaattttcataattttttctaatatattattcagaatgtttaagctcaaaattatacattaacatatataatatggtcaactgtgtcat 29424885  T
Q  101 atatta 106  Q
    ||||||    
T  29424886 atatta 29424891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 1613138 - 1613050
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaac 92  Q
    ||||||||||||||| || | ||||||||||| ||||||||| |||||||| |||||||||||| |||| |||| |||||| |||||||    
T  1613138 aaaatatcaaatttttattattttttctaatatattattcaagatatttaaactcaaaattatgtattgacatgcgtaatagggtcaac 1613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 1981300 - 1981212
Alignment:
Q  5 aaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaact 93  Q
    ||||||||||||||||||| | ||||||| | ||||||||| |||||||| ||||||||||||||||| |||| |||| | ||||||||    
T  1981300 aaatatcaaattttcataattatttctaacatattattcaagatatttaaactcaaaattatgcattgacatgcgtaagagggtcaact 1981212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 39332750 - 39332642
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  39332750 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 39332651  T
Q  104 ttaagggac 112  Q
    |||||||||    
T  39332650 ttaagggac 39332642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 24334298 - 24334191
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||| | ||||||||| | ||||||||| |||| |||||||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  24334298 aaaatatcaaattttcatgattttttctaacatattattcaagatatgtaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtcatgta 24334199  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  24334198 ttaaggga 24334191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 46608356 - 46608475
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaataca-ttattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| |||||| |||| | |||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  |    
T  46608356 aaaatatcaaattttcataattttttccaatatacttattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactt 46608455  T
Q  103 attaagggacaaagggagta 122  Q
    ||||||||||  ||||||||    
T  46608456 attaagggacggagggagta 46608475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 10384991 - 10385109
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||   |||  ||    
T  10384991 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcactta 10385090  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  10385091 ttaagggacggagggagta 10385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 30386974 - 30387064
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactg 94  Q
    |||||| ||||||||||||| ||||| ||||| ||||||||| ||||| |||||| |||||||| ||||  ||||||| ||||||||||||    
T  30386974 aaaataccaaattttcataattttttataatatattattcaagatattaaagctcgaaattatgtattgatatgtgtagtaaggtcaactg 30387064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 54802978 - 54802869
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||| || |||| |||||||||||  ||||| |  |||||||| ||||||||||||||||  |||| ||||||||||||||| | |||| ||    
T  54802978 aaaatatcaaatattaataattttttctaatatgttatttacgatatttaacctcaaaattatgcattaacatgcgtaataaggtcaactctatcaagta 54802879  T
Q  104 ttaagggaca 113  Q
    ||| ||||||    
T  54802878 ttatgggaca 54802869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 23605822 - 23605703
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||| | ||||||||| | ||||||||| ||||||||| ||||||||||||||||  ||| |||||   ||||||||| |||  ||    
T  23605822 aaaatattaaattttcattattttttctaacatattattcaagatatttaagttcaaaattatgcattggaatgcgtaatggagtcaactgtgtcatgta 23605723  T
Q  104 ttaagggacaaagggagtac 123  Q
    |||| ||||  |||||||||    
T  23605722 ttaaaggacggagggagtac 23605703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 28909760 - 28909669
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||| |||||||| | ||||||||| | ||||||||| |||||||||||||||||||| ||||| |||  |||||| | ||||||||    
T  28909760 aaaatatcatattttcatgattttttctaacatattattcaaaatatttaagctcaaaattatacattggcatacgtaatatgatcaactgt 28909669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 37667694 - 37667615
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaat 83  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||  |||||| |||| |||||    
T  37667694 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattgcgcattggcatgcgtaat 37667615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 31657276 - 31657159
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||| ||||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||  ||| ||||    ||||||||| |||  ||    
T  31657276 aaaatatcaa-ttttcatgattttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcgtaaatgagtcaactgtatcattta 31657178  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||||||| || ||||||    
T  31657177 ttaagggacgaatggagta 31657159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 48652615 - 48652733
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| ||||||||||  |||||  ||  |||||  |||||||||| |||  ||    
T  48652615 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacacattggtatccgtaattgggtcaactgtgtcactta 48652714  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  48652715 ttaagggacggagggagta 48652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 43047530 - 43047596
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcat 70  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||    
T  43047530 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcat 43047596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 42185425 - 42185525
Alignment:
Q  12 aaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaaggga 111  Q
    |||||||||||| ||||| ||| | |||||| || |||||||||||||||||||||||||   ||  |||||| |||||||||| |||  ||||| ||||    
T  42185425 aaattttcataattttttataacatattatttaagatatttaagctcaaaattatgcatttgaataggtaatatggtcaactgtatcatgtattatggga 42185524  T
Q  112 c 112  Q
    |    
T  42185525 c 42185525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45064407 - 45064483
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatg 77  Q
    ||||||||||||||||||||||| ||||| || || |||||| || ||||||||| | |||||| ||||||| ||||    
T  45064407 tttaaaatatcaaattttcataattttttttattagattattaaagatatttaagtttaaaattgtgcattgccatg 45064483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 42862213 - 42862146
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    ||||||| |||||||||||| ||||||||||| |||||| || ||||||||  | |||||||| ||||    
T  42862213 aaaatataaaattttcataattttttctaatatattattaaagatatttaaatttaaaattatccatt 42862146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 21045108 - 21045050
Alignment:
Q  37 attattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    ||||||||| ||||| ||||||||||||||| |||| |||| ||||||  |||||||||    
T  21045108 attattcaaaatattcaagctcaaaattatgtattgacatgcgtaatagagtcaactgt 21045050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 19656 - 19548
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||||| |||| ||    
T  19656 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaagctcaaaattatgcattgacattcgtaataaggtcaactgtgtcaagta 19557  T
Q  104 ttaagggac 112  Q
    |||| ||||    
T  19556 ttaatggac 19548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 31948567 - 31948456
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||| |||||||||||| |||| ||||||||||||| ||| |||| ||    
T  31948567 aaaatatcaaattttcataattttttctaatatattattcaagatatt-aagctcagaattatgcattgacatgcgtaataaggtcaattgtgtcaagta 31948469  T
Q  104 ttaagggacaaag 116  Q
    |||||||||||||    
T  31948468 ttaagggacaaag 31948456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 4890051 - 4889942
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| | || ||||||||| |||||||||||||||||||||||||| |||| |||||||| ||||| || |||| ||    
T  4890051 aaaatatcaaattttcataattttttcgagtatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataagatcaaccgtgtcaagta 4889952  T
Q  104 ttaagggaca 113  Q
    ||| ||||||    
T  4889951 ttatgggaca 4889942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 10109336 - 10109245
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||  |||| |||||||||| ||||||    
T  10109336 aaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcatttgcatgcgtaataaggtaaactgt 10109245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 31709036 - 31709153
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||  ||||||| |||||| | |||| ||    
T  31709036 aaaatatcaaattttcataa-tttttctaatatattattcaaaatatttaagctcaaagttatgcattggcatgcataataagatcaactatgtcaagta 31709134  T
Q  104 ttaagggacaaagggagta 122  Q
    ||| ||||| || ||||||    
T  31709135 ttatgggacgaatggagta 31709153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6142435 - 6142314
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||     
T  6142435 tttaaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcac 6142336  T
Q  101 atattaagggacaaagggagta 122  Q
     |||||||||||  ||||||||    
T  6142335 ttattaagggacggagggagta 6142314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 995703 - 995826
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||  |||||||||| |||     
T  995703 tttaaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattactcattggtatgcgtaattgggtcaactgtgtcac 995802  T
Q  101 atattaagggacaaagggagtact 124  Q
     |||||||||||  ||||||||||    
T  995803 ttattaagggacggagggagtact 995826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 2667250 - 2667132
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||| |||||||||| ||||||  ||| ||||| ||||||||||| |||  ||    
T  2667250 aaaatatcaaattttcataatttttttcaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtcactta 2667151  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  2667150 ttaagggacggagggagta 2667132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 35117419 - 35117537
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||   ||| |||||  |||||||||| |||  ||    
T  35117419 aaaatatcaaattttcataattttttctaatatattatccaagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtcatgta 35117518  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  35117519 ttaagtgacggagggagta 35117537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 12677122 - 12677225
Alignment:
Q  4 aaaatatcaaattttcataaatttt-tctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    ||||||||||||||||| || |||| ||||||| ||||||||| |||||||| |||||||||||||||||  ||||||||||| ||||||| | ||| ||    
T  12677122 aaaatatcaaattttcacaatttttttctaatatattattcaaaatatttaaactcaaaattatgcattgatatgtgtaataaagtcaactatgtcatat 12677221  T
Q  103 atta 106  Q
    ||||    
T  12677222 atta 12677225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 17496253 - 17496146
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  17496253 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 17496154  T
Q  104 ttaaggga 111  Q
    ||||||||    
T  17496153 ttaaggga 17496146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 2397913 - 2398031
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| || ||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  2397913 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaacttaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 2398012  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  2398013 ttaagggacggagggagta 2398031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16661530 - 16661408
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttc-taatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttca 99  Q
    ||||||||||||||||||||||  |||||  ||||| ||||||||| ||||||||||||||| ||||| |||| |||  ||||||||||||||||| | |    
T  16661530 tttaaaatatcaaattttcatattttttttataatatattattcaagatatttaagctcaaagttatgtattgacatacgtaataaggtcaactgtgtaa 16661431  T
Q  100 aatattaagggacaaagggagta 122  Q
    | |||||  ||||| ||||||||    
T  16661430 agtattataggacagagggagta 16661408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 10105954 - 10106062
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||||| || ||||||||| ||||| || |||||||||||||||||  ||  |||||| |||||||||| |||  ||    
T  10105954 aaaatatcaaattttcataattttttctagtatattattcaagatattaaatctcaaaattatgcattgatatacgtaatatggtcaactgtgtcatgta 10106053  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  10106054 ttatgggac 10106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 32673891 - 32674010
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| ||||||||| | ||||||||| || |||||| |||||||||| | |||  |||||||||   ||||||||| |||  ||    
T  32673891 aaaatatcaaattttcataattttttctaacatattattcaagatgtttaaggtcaaaattatacgttggaatgtgtaatggagtcaactgtatcatgta 32673990  T
Q  104 ttaagggacaaagggagtac 123  Q
    |||||||||  |||||||||    
T  32673991 ttaagggacggagggagtac 32674010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 2141711 - 2141829
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||  |||||  |||||||||| |||  ||    
T  2141711 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtcattta 2141810  T
Q  104 ttaagggacaaagggagta 122  Q
    ||||| |||  ||||||||    
T  2141811 ttaagagacggagggagta 2141829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 2913040 - 2913158
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  ||||||||   |||  ||    
T  2913040 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactaggtcactta 2913139  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  2913140 ttaagggacggagggagta 2913158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 29514951 - 29514834
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||| ||| |||  ||    
T  29514951 aaaatatcaaattttcataa-tttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtcactta 29514853  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  29514852 ttaagggacggagggagta 29514834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32541405 - 32541335
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| |||||    
T  32541405 tttaaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcatt 32541335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 6188581 - 6188476
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| |||||| || |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  6188581 aaaatatcaaattttcataattttttccaatatattatttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 6188482  T
Q  104 ttaagg 109  Q
    ||||||    
T  6188481 ttaagg 6188476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 26210890 - 26210958
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| ||||||||||| |||||| || ||||||||| ||||||||||| ||||    
T  26210890 aaaatatcaaattttcataattttttctaatatattattaaagatatttaagttcaaaattatgtattg 26210958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 30699404 - 30699472
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| ||||||||||| ||||||| | |||||||| |||||||||| ||||||    
T  30699404 aaaatatcaaattttcataattttttctaatatattattctagatatttaaactcaaaattacgcattg 30699472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 2656595 - 2656504
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgt 95  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| || ||||||| ||||||  ||| |||||  ||||||||||    
T  2656595 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaacttaaaattacgcattggtatgcgtaatttggtcaactgt 2656504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 16969533 - 16969640
Alignment:
Q  15 ttttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaa 114  Q
    ||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  |||||||||||      
T  16969533 ttttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcacttattaagggacgg 16969632  T
Q  115 agggagta 122  Q
    ||||||||    
T  16969633 agggagta 16969640  T

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Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 24825308 - 24825426
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||||||||  |||||  ||| |||||   ||||||||  |||  ||    
T  24825308 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacacattgatatgcgtaattgagtcaactggatcactta 24825407  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  24825408 ttaagggacggagggagta 24825426  T

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Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 24949834 - 24949923
Alignment:
Q  23 aatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggac 112  Q
    ||||||| ||| | ||||||||| ||||||||||| ||| |||||||||| |||| ||||||||||||| ||| |||| ||||| |||||    
T  24949834 aatttttttaacatattattcaagatatttaagctgaaagttatgcattgacatgcgtaataaggtcaattgtatcaagtattatgggac 24949923  T

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Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 24798471 - 24798403
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||| |||  ||||||||| |||||||| |||||||||| ||||||    
T  24798471 aaaatatcaaattttcataattttttccaatttattattcaagatatttaaactcaaaattacgcattg 24798403  T

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Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 9022983 - 9023051
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||||| |||||  |||| ||||||||| |||||||  |||||||||| ||||||    
T  9022983 aaaatatcaaattttcataatttttttcaatatattattcaagatatttactctcaaaattacgcattg 9023051  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16120802 - 16120739
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaatt 64  Q
    |||||||||||||||||| |||| ||||||||||| |||||| ||  |||||||  ||||||||    
T  16120802 tttaaaatatcaaatttttataattttttctaatagattattaaagttatttaatatcaaaatt 16120739  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 26389273 - 26389212
Alignment:
Q  6 aatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatg 67  Q
    ||||||||||||| |||| ||||| ||||| |||||| || ||||||||| | |||||||||    
T  26389273 aatatcaaatttttataattttttttaatatattattaaaaatatttaagattaaaattatg 26389212  T

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Target: scaffold0195 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 166 - 48
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||| |||||| ||||||||| |||||||| |||||| |||| ||||| |||| ||||||||||||||||| |||| ||    
T  166 aaaatatcaaattttcataatttttcctaatatattattcaagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtcaagta 67  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  66 ttaagggacggagggagta 48  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 5519 - 5637
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||  ||    
T  5519 aaaatatcaaattttcataattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtcactta 5618  T
Q  104 ttaagggacaaagggagta 122  Q
    |||||||||  ||||||||    
T  5619 ttaagggacggagggagta 5637  T

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Target: scaffold0001 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 184106 - 184228
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaa 100  Q
    ||||||||||||||||||| ||| |||||| |||| ||||||||| |||||||| |||||||||| ||||||  ||| |||||  |||||||||| |||     
T  184106 tttaaaatatcaaattttcgtaattttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtatcac 184205  T
Q  101 atattaagggacaaagggagtac 123  Q
     |||||| ||||  |||||||||    
T  184206 ttattaaaggacggagggagtac 184228  T

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Target: scaffold1248 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 1375 - 1309
Alignment:
Q  6 aatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| ||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  1375 aatatcaaattttcataattttttctaatatattattcaggatatttaagcttaaaattatgcattg 1309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 938 - 1004
Alignment:
Q  6 aatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattg 72  Q
    |||||||||||||||||| ||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  938 aatatcaaattttcataattttttctaatatattattcaggatatttaagcttaaaattatgcattg 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2144 - 2074
Alignment:
Q  1 tttaaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcatt 71  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||| ||||||||| |||||||||||||||    
T  2144 tttaaaatatcaaattctcataattttttctgatatattattcaagatatttaagttcaaaattatgcatt 2074  T

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Target: scaffold0500 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 596 - 490
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    ||||||| |||||||||||| ||||| | |  |||||||||| |||||||||||||||||||||||||| |||  |||||| |||||||||| |||  ||    
T  596 aaaatatgaaattttcataattttttatca--cattattcaagatatttaagctcaaaattatgcattgacatacgtaatagggtcaactgtgtcatgta 499  T
Q  104 ttaagggac 112  Q
    ||| |||||    
T  498 ttatgggac 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 13247 - 13366
Alignment:
Q  4 aaaatatcaaattttcataaattttt-ctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaat 102  Q
    |||||||||||||||||||| ||||| |||| | ||||||||| ||||||||| ||||||||||| ||||  ||| |||||   || |||||| ||| ||    
T  13247 aaaatatcaaattttcataatttttttctaacatattattcaagatatttaaggtcaaaattatgtattggaatgcgtaatggagttaactgtgtcatat 13346  T
Q  103 attaagggacaaagggagta 122  Q
    ||||||||||  ||||||||    
T  13347 attaagggacggagggagta 13366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 9267 - 9368
Alignment:
Q  4 aaaatatcaaattttcataaatttttctaatacattattcaatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaata 103  Q
    |||||||||||||| |||| |||||||||||| ||||||||| |||||||| || |||  ||| |||||  ||| ||||||||||||||||| |||| ||    
T  9267 aaaatatcaaattt-catagatttttctaatatattattcaagatatttaaactaaaagctatacattgatatgcgtaataaggtcaactgtatcaagta 9365  T
Q  104 tta 106  Q
    |||    
T  9366 tta 9368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 3166 - 3244
Alignment:
Q  44 aatatatttaagctcaaaattatgcattgtcatgtgtaataaggtcaactgtttcaaatattaagggacaaagggagta 122  Q
    |||||||||||||||||||||||||||||  ||| |||||| |||||||||| |||  ||||| |||||  ||||||||    
T  3166 aatatatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtcatgtattatgggacggagggagta 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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