View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19756_low_31 (Length: 260)
Name: NF19756_low_31
Description: NF19756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19756_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 6351938 - 6352177
Alignment:
| Q |
1 |
gtgtagctaaaatgtgatggctcaggagtagggctccgtaattttgtgtgaattacttcaaataatttagaatgaatagtaatggaaagtggagtatgta |
100 |
Q |
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| T |
6351938 |
gtgtaactaaaatgtgatggctcaggagtagggctccgtaattttgtgtgaattacttcaaataatttagaatgaatagtaatggaaagtggagtatgta |
6352037 |
T |
|
| Q |
101 |
atcgatgtgatttaccaacacagcaagaattacaaaaaccataaagttctttactagcaattggtatattacagatggaaattacatttttgacaaattg |
200 |
Q |
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| T |
6352038 |
atcgatgtgatttaccaacacagcaagaattacaaaaaccataaagttctttactagcaattggtatattacagatggaaattacatttttgac-aattg |
6352136 |
T |
|
| Q |
201 |
accattagcatggcctagctagcataccaaatggatttact |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
6352137 |
accattagcatggcctagctagcataccaaatggatttact |
6352177 |
T |
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