View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19756_low_37 (Length: 210)
Name: NF19756_low_37
Description: NF19756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19756_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 47154418 - 47154586
Alignment:
| Q |
26 |
agaagagaagctttatcacatgcaagaaaaaatcgcgttagagaacgatatgacatctaaatcctaatgagagactaatcccaatcaccagttaattttt |
125 |
Q |
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| T |
47154418 |
agaagagaagctttatcacatgcaagaaaaaatcgcgttagagaacgatatgacatctaaatcctaatgagagactaatcccaatcaccagttaattttt |
47154517 |
T |
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| Q |
126 |
gacacatattatactataaaattggcataccatcacttcattatatatggttaaaaatgtagatatcat |
194 |
Q |
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| T |
47154518 |
gacacctattatactataaaattggcataccatcacttcattatatatggttaaaaatgtagatatcat |
47154586 |
T |
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