View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19757_high_5 (Length: 730)

Name: NF19757_high_5
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19757_high_5
NF19757_high_5
[»] chr3 (45 HSPs)
chr3 (446-720)||(37557199-37557473)
chr3 (446-720)||(37561537-37561811)
chr3 (304-417)||(26165543-26165663)
chr3 (353-417)||(55026759-55026823)
chr3 (354-413)||(46123947-46124006)
chr3 (304-417)||(30418418-30418538)
chr3 (349-417)||(20139376-20139445)
chr3 (349-417)||(6048685-6048753)
chr3 (349-417)||(17466531-17466599)
chr3 (349-417)||(25790764-25790832)
chr3 (349-417)||(36178693-36178761)
chr3 (362-417)||(50415819-50415874)
chr3 (349-415)||(47144189-47144255)
chr3 (349-417)||(5845129-5845197)
chr3 (349-417)||(29701698-29701766)
chr3 (349-417)||(41183290-41183358)
chr3 (349-417)||(52000051-52000119)
chr3 (362-417)||(11908048-11908103)
chr3 (304-414)||(51999229-51999346)
chr3 (349-415)||(32120429-32120495)
chr3 (349-415)||(42560917-42560983)
chr3 (349-415)||(44084325-44084391)
chr3 (353-415)||(51304358-51304420)
chr3 (349-410)||(43473906-43473967)
chr3 (349-417)||(6832400-6832468)
chr3 (349-417)||(38572143-38572211)
chr3 (324-417)||(12974652-12974753)
chr3 (362-417)||(27847438-27847493)
chr3 (362-417)||(50734045-50734100)
chr3 (362-417)||(50778755-50778810)
chr3 (349-415)||(4045996-4046062)
chr3 (363-404)||(28155230-28155271)
chr3 (349-416)||(138991-139059)
chr3 (349-416)||(10426421-10426488)
chr3 (362-417)||(48886975-48887030)
chr3 (355-417)||(49357486-49357548)
chr3 (349-407)||(25832724-25832781)
chr3 (362-403)||(37183840-37183881)
chr3 (349-417)||(41890550-41890618)
chr3 (349-417)||(42601494-42601562)
chr3 (349-417)||(42601777-42601845)
chr3 (349-417)||(49823159-49823227)
chr3 (349-417)||(51427116-51427184)
chr3 (349-408)||(49147287-49147345)
chr3 (349-417)||(33935007-33935075)
[»] chr6 (21 HSPs)
chr6 (19-301)||(1775121-1775403)
chr6 (349-417)||(631532-631600)
chr6 (349-417)||(8660573-8660641)
chr6 (349-417)||(34838595-34838663)
chr6 (354-417)||(8669909-8669972)
chr6 (349-416)||(12501846-12501913)
chr6 (353-416)||(12512931-12512994)
chr6 (362-416)||(10883899-10883953)
chr6 (362-416)||(30446271-30446325)
chr6 (366-415)||(26654327-26654376)
chr6 (366-415)||(26760297-26760346)
chr6 (349-417)||(34328295-34328363)
chr6 (350-417)||(8218960-8219027)
chr6 (353-417)||(24933271-24933337)
chr6 (349-416)||(197818-197885)
chr6 (365-417)||(2503257-2503307)
chr6 (349-417)||(17961253-17961321)
chr6 (349-417)||(24348447-24348515)
chr6 (349-415)||(32359760-32359826)
chr6 (349-417)||(6380478-6380546)
chr6 (349-406)||(29428519-29428575)
[»] chr2 (28 HSPs)
chr2 (470-720)||(21469724-21469978)
chr2 (349-416)||(17485833-17485900)
chr2 (349-415)||(24997096-24997162)
chr2 (353-417)||(1073073-1073137)
chr2 (349-417)||(4296761-4296829)
chr2 (349-417)||(12855035-12855103)
chr2 (349-417)||(22351604-22351672)
chr2 (349-417)||(30822573-30822641)
chr2 (349-417)||(43021757-43021825)
chr2 (366-417)||(9117845-9117896)
chr2 (349-417)||(8852073-8852141)
chr2 (349-417)||(17929245-17929313)
chr2 (349-417)||(36209464-36209532)
chr2 (353-415)||(44280012-44280074)
chr2 (349-405)||(7763489-7763545)
chr2 (313-416)||(39490116-39490226)
chr2 (362-417)||(1308687-1308742)
chr2 (349-417)||(7588492-7588562)
chr2 (362-417)||(14382996-14383051)
chr2 (363-407)||(6362983-6363027)
chr2 (349-416)||(36526837-36526904)
chr2 (349-417)||(9074214-9074282)
chr2 (349-417)||(37245517-37245585)
chr2 (349-416)||(1987135-1987202)
chr2 (349-407)||(14152067-14152125)
chr2 (349-406)||(927893-927949)
chr2 (362-407)||(5146711-5146756)
chr2 (349-417)||(13151473-13151542)
[»] chr8 (26 HSPs)
chr8 (476-703)||(30741593-30741824)
chr8 (304-415)||(40283437-40283555)
chr8 (304-416)||(43524381-43524500)
chr8 (304-417)||(1958169-1958289)
chr8 (304-417)||(13947328-13947448)
chr8 (349-415)||(26244511-26244577)
chr8 (363-416)||(35099463-35099516)
chr8 (349-417)||(1634830-1634898)
chr8 (353-417)||(12272471-12272535)
chr8 (349-417)||(42859939-42860007)
chr8 (349-417)||(45101014-45101082)
chr8 (362-417)||(43525078-43525133)
chr8 (354-417)||(44149889-44149952)
chr8 (306-415)||(29731659-29731774)
chr8 (368-417)||(23549746-23549795)
chr8 (349-417)||(43618338-43618406)
chr8 (364-417)||(15053661-15053714)
chr8 (362-415)||(35931889-35931942)
chr8 (349-407)||(31129502-31129560)
chr8 (363-417)||(5735315-5735369)
chr8 (349-417)||(18029488-18029556)
chr8 (349-417)||(34955655-34955723)
chr8 (349-416)||(5212305-5212372)
chr8 (349-417)||(44503181-44503249)
chr8 (363-417)||(36912445-36912499)
chr8 (349-417)||(41477197-41477265)
[»] chr4 (37 HSPs)
chr4 (304-417)||(45081401-45081521)
chr4 (304-415)||(13094381-13094499)
chr4 (304-415)||(35809126-35809244)
chr4 (362-416)||(48403890-48403944)
chr4 (305-415)||(4981473-4981590)
chr4 (363-417)||(52017373-52017427)
chr4 (354-415)||(34464014-34464075)
chr4 (349-417)||(2215271-2215339)
chr4 (349-417)||(3533296-3533364)
chr4 (349-417)||(6290615-6290683)
chr4 (349-417)||(8991798-8991866)
chr4 (349-417)||(33604672-33604740)
chr4 (349-417)||(38173570-38173638)
chr4 (349-417)||(40721050-40721118)
chr4 (349-417)||(46917500-46917568)
chr4 (353-417)||(48506595-48506659)
chr4 (349-416)||(34199259-34199326)
chr4 (363-416)||(23540416-23540469)
chr4 (349-417)||(3618442-3618510)
chr4 (349-417)||(23389918-23389986)
chr4 (349-417)||(55560468-55560536)
chr4 (349-415)||(19272798-19272864)
chr4 (349-414)||(31336346-31336411)
chr4 (349-417)||(13110576-13110644)
chr4 (349-417)||(16020862-16020930)
chr4 (349-417)||(28899347-28899415)
chr4 (353-415)||(16175006-16175068)
chr4 (349-415)||(27863730-27863796)
chr4 (365-417)||(27142319-27142369)
chr4 (354-417)||(17329901-17329965)
chr4 (349-416)||(33523285-33523353)
chr4 (353-416)||(53348050-53348114)
chr4 (362-417)||(33077863-33077917)
chr4 (349-416)||(56054032-56054098)
chr4 (349-417)||(18469356-18469425)
chr4 (349-417)||(53184085-53184153)
chr4 (362-415)||(52772781-52772834)
[»] scaffold0016 (1 HSPs)
scaffold0016 (304-415)||(66063-66181)
[»] chr5 (29 HSPs)
chr5 (324-417)||(23089500-23089600)
chr5 (304-416)||(3454698-3454816)
chr5 (306-417)||(29619003-29619121)
chr5 (304-417)||(25670895-25671015)
chr5 (304-415)||(13479815-13479934)
chr5 (349-417)||(19241330-19241398)
chr5 (349-417)||(31013833-31013901)
chr5 (304-417)||(32976565-32976685)
chr5 (349-417)||(31008374-31008442)
chr5 (304-415)||(40888856-40888974)
chr5 (362-417)||(27942518-27942573)
chr5 (349-417)||(42806989-42807057)
chr5 (362-417)||(30648102-30648157)
chr5 (349-415)||(39238428-39238494)
chr5 (324-417)||(4219434-4219530)
chr5 (349-417)||(7651017-7651085)
chr5 (362-417)||(36572409-36572464)
chr5 (365-415)||(42317918-42317968)
chr5 (349-417)||(25652827-25652895)
chr5 (349-416)||(27407032-27407100)
chr5 (369-417)||(39008514-39008562)
chr5 (349-408)||(41153005-41153063)
chr5 (363-416)||(4938213-4938267)
chr5 (349-417)||(4577019-4577087)
chr5 (349-417)||(8176292-8176360)
chr5 (353-408)||(34709895-34709950)
chr5 (353-411)||(32363610-32363668)
chr5 (349-417)||(14278843-14278911)
chr5 (362-407)||(25032380-25032424)
[»] chr7 (24 HSPs)
chr7 (349-417)||(35029098-35029166)
chr7 (304-415)||(45549610-45549728)
chr7 (304-417)||(36518478-36518598)
chr7 (349-417)||(40302480-40302548)
chr7 (362-417)||(39769757-39769812)
chr7 (349-415)||(30566615-30566681)
chr7 (349-417)||(5813113-5813181)
chr7 (349-417)||(47159484-47159552)
chr7 (366-415)||(33508517-33508566)
chr7 (349-417)||(32130260-32130328)
chr7 (349-417)||(42881373-42881441)
chr7 (362-417)||(20354251-20354306)
chr7 (362-417)||(30720148-30720203)
chr7 (349-416)||(32748812-32748879)
chr7 (304-417)||(26812076-26812196)
chr7 (362-415)||(38351607-38351660)
chr7 (368-415)||(33078776-33078823)
chr7 (373-417)||(37951788-37951832)
chr7 (362-417)||(22191248-22191303)
chr7 (362-417)||(22656695-22656750)
chr7 (360-417)||(25038582-25038639)
chr7 (349-415)||(37887862-37887928)
chr7 (349-417)||(114505-114573)
chr7 (349-417)||(22737584-22737652)
[»] chr1 (33 HSPs)
chr1 (304-417)||(51494461-51494581)
chr1 (349-416)||(48404342-48404409)
chr1 (349-417)||(31159399-31159467)
chr1 (349-417)||(36230369-36230437)
chr1 (349-416)||(37822581-37822649)
chr1 (349-417)||(45239150-45239218)
chr1 (349-417)||(45456140-45456208)
chr1 (349-417)||(48388097-48388165)
chr1 (349-416)||(37646550-37646617)
chr1 (349-415)||(19578901-19578967)
chr1 (349-415)||(31468145-31468211)
chr1 (304-416)||(23092729-23092848)
chr1 (349-417)||(2478317-2478385)
chr1 (349-417)||(27630449-27630517)
chr1 (362-410)||(35847117-35847165)
chr1 (349-417)||(37420333-37420401)
chr1 (304-417)||(51156877-51156997)
chr1 (365-415)||(14096719-14096769)
chr1 (349-417)||(8464111-8464179)
chr1 (362-415)||(30878535-30878588)
chr1 (349-417)||(37691279-37691347)
chr1 (349-416)||(29523715-29523782)
chr1 (349-416)||(33164424-33164491)
chr1 (362-417)||(45623519-45623574)
chr1 (349-417)||(17783389-17783457)
chr1 (349-417)||(44334301-44334369)
chr1 (349-417)||(44929279-44929347)
chr1 (349-416)||(47300487-47300554)
chr1 (349-411)||(8468336-8468398)
chr1 (365-417)||(29919398-29919451)
chr1 (349-417)||(44451259-44451327)
chr1 (349-417)||(44651085-44651153)
chr1 (353-417)||(51520233-51520298)
[»] scaffold0054 (1 HSPs)
scaffold0054 (349-417)||(57732-57800)
[»] scaffold0362 (1 HSPs)
scaffold0362 (304-413)||(5316-5432)


Alignment Details
Target: chr3 (Bit Score: 271; Significance: 1e-151; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 446 - 720
Target Start/End: Original strand, 37557199 - 37557473
Alignment:
Q  446 tgaaagagttaaagtagtatttttctgttagaataaaatcctagtttataggagaggacttggtctttaagaaattaatttgtatttgttttaatttgtt 545  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37557199 tgaaagagttaaagtagtatttgtctgttagaataaaatcctagtttataggagaggacttggtctttaagaaattaatttgtatttgttttaatttgtt 37557298  T
Q  546 tcagttgccactcaccactagcctttattctagctaagtgggttgctttcagttgtgttttttatcgtgtgttgaatggctatttaagccaacattgcaa 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37557299 tcagttgccactcaccactagcctttattctagctaagtgggttgctttcagttgtgttttttatcgtgtgttgaatggctatttaagccaacattgcaa 37557398  T
Q  646 ttaataaaattgagtcatttagtccaattgttgtgttctttgctatcagtttccaaacgcttaaacacaggttct 720  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37557399 ttaataaaattgagtcatttagtccaattgttgtgttctttgctatcagtttccaaacgcttaaacacaggttct 37557473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 446 - 720
Target Start/End: Original strand, 37561537 - 37561811
Alignment:
Q  446 tgaaagagttaaagtagtatttttctgttagaataaaatcctagtttataggagaggacttggtctttaagaaattaatttgtatttgttttaatttgtt 545  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37561537 tgaaagagttaaagtagtatttgtctgttagaataaaatcctagtttataggataggacttggtctttaagaaattaatttgtatttgttttaatttgtt 37561636  T
Q  546 tcagttgccactcaccactagcctttattctagctaagtgggttgctttcagttgtgttttttatcgtgtgttgaatggctatttaagccaacattgcaa 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37561637 tcagttgccactcaccactagcctttattctagctaagtgggttgctttcagttgtgttttttatcgtgtgttgaatggctatttaagccaacattgcaa 37561736  T
Q  646 ttaataaaattgagtcatttagtccaattgttgtgttctttgctatcagtttccaaacgcttaaacacaggttct 720  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37561737 ttaataaaattgagtcatttagtccaattgttgtgttctttactatcagtttccaaacgcttaaacacaggttct 37561811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 26165663 - 26165543
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||       |||| ||||| | |||||||||||||||||||||||||||||| ||||    
T  26165663 accatgtacaatgggaaaatattttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccatt 26165564  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  26165563 caatttttacctctccaatgg 26165543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 55026759 - 55026823
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55026759 tcaacacttcacttcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 55026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 46123947 - 46124006
Alignment:
Q  354 caacatttcacatcattttctctctcataattcaacactcattcaatttttacctctcca 413  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46123947 caacattctacatcattttctctctcataattcaacactcattcaatttttacctctcca 46124006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 30418538 - 30418418
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||  ||||||| | ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||| ||||    
T  30418538 accatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 30418439  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  30418438 caatttttacctctccaatgg 30418418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 20139376 - 20139445
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc-tctccaatgg 417  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  20139376 attctcaacacttcacatcattttctctctcttaattcaacactcattcaacttttaccttctccaatgg 20139445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 6048753 - 6048685
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6048753 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 6048685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 17466531 - 17466599
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  17466531 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 17466599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 25790832 - 25790764
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  25790832 attcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 25790764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 36178761 - 36178693
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  36178761 attcccaacacttcaaatcattttctctctcataattcaacatccattcaatttttacctctccaatgg 36178693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 50415874 - 50415819
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  50415874 cacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 50415819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 47144189 - 47144255
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  47144189 attcccaacactccacatcattttctctctcttaattcaacacttattcaatttttacctctccaat 47144255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 5845197 - 5845129
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  5845197 attcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 5845129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 29701698 - 29701766
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  29701698 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacccctccaatgg 29701766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 41183290 - 41183358
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  41183290 attcccaacactccacatcattttctctctcttaattcaacacccatacaatttttacctctccaatgg 41183358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 52000119 - 52000051
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  52000119 attcccaacactccacatcattttctctctcataattcaacatttattcaatttttacatctccaatgg 52000051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 11908048 - 11908103
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  11908048 cacatcattttttctctcataattcaacacccattcaatttttacctcttcaatgg 11908103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 51999346 - 51999229
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||| ||||| | | ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||| ||||    
T  51999346 accatttacaatggcaaaatatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 51999247  T
Q  397 caatttttacctctccaa 414  Q
    ||||||||| ||||||||    
T  51999246 caatttttatctctccaa 51999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 32120495 - 32120429
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  32120495 attcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacctctccaat 32120429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 42560917 - 42560983
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||||| |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||    
T  42560917 attcccaacattccacatcattttctctctcttaattcaacaccctttcaatttttaactctccaat 42560983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 44084325 - 44084391
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  44084325 attcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacctctccaat 44084391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 353 - 415
Target Start/End: Original strand, 51304358 - 51304420
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||| | ||| ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  51304358 tcaacactccacgtcattttctctatcataattcaacacccattcaatttttacctctccaat 51304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 43473906 - 43473967
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctct 410  Q
    |||| ||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43473906 attcccaacattccagatcattttctctctcttaattcaacacccattcaatttttacctct 43473967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 6832400 - 6832468
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||||| |||  ||||||||||||||||||||||||| |||||||||||    
T  6832400 attcccaacactccacatcattttctttcttttaattcaacactcattcaatttttatctctccaatgg 6832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 38572211 - 38572143
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||| | ||||| |||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  38572211 attctcaacactccacattattttctctctcttaattcaacatctattcaatttttacctctccaatgg 38572143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 12974652 - 12974753
Alignment:
Q  324 attttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattca-atttttacctctccaat 415  Q
    |||||||||||| ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||| ||||||  ||||||||||||||||    
T  12974652 attttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcatttttttacctctccaat 12974751  T
Q  416 gg 417  Q
    ||    
T  12974752 gg 12974753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 27847438 - 27847493
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||    
T  27847438 cacatcattttctctctcttaattcaacacccatttaatttttacctcttcaatgg 27847493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 50734045 - 50734100
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||    
T  50734045 cacatcattttctctctcttaattcaatacctattcaatttttacctctccaatgg 50734100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 50778810 - 50778755
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||    
T  50778810 cacatcattttctctctcttaattcaatacctattcaatttttacctctccaatgg 50778755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 4045996 - 4046062
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| | || ||||||||||||||||||    
T  4045996 attcccaacactccacatcattttctctctcttaattcaacacccttttaatttttacctctccaat 4046062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 404
Target Start/End: Complemental strand, 28155271 - 28155230
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaattttt 404  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  28155271 acataattttctctctcataattcaacactcattcaattttt 28155230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 138991 - 139059
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatg 416  Q
    |||| ||||| | ||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||    
T  138991 attcccaacactccacatcattttgtctctcttaattcaacactcattcaacttttaccctctccaatg 139059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 10426488 - 10426421
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||  ||||| || || ||||||||||||||||||||||||    
T  10426488 attcccaacactccacatcattttctctcttttaatttaatacccattcaatttttacctctccaatg 10426421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 48887030 - 48886975
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||| |||||||||||| ||||| ||||  |||||||||||||||||||||||||    
T  48887030 cacattattttctctctcttaatttaacatccattcaatttttacctctccaatgg 48886975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 49357548 - 49357486
Alignment:
Q  355 aacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    ||||||||| ||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  49357548 aacatttcatatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 49357486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 25832781 - 25832724
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc 407  Q
    |||| ||||| |||||||||||||||||||| | ||||||||||||||||| |||||||    
T  25832781 attcccaacacttcacatcattttctctctc-ttattcaacactcattcaacttttacc 25832724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 37183881 - 37183840
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttt 403  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  37183881 cacatcattttctctctcttaattcaacacccattcaatttt 37183840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 41890550 - 41890618
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  41890550 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 41890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 42601562 - 42601494
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  42601562 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 42601494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 42601777 - 42601845
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc-tctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||    
T  42601777 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccttctccaatgg 42601845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 49823227 - 49823159
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc-tctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||    
T  49823227 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccatctccaatgg 49823159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 51427116 - 51427184
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc-tctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||    
T  51427116 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccatctccaatgg 51427184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 49147345 - 49147287
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacct 408  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||||||    
T  49147345 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttacct 49147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 33935007 - 33935075
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||||||| |||| ||||| ||||||||||||    
T  33935007 attcccaacactccacatcattttctctctc-ttattcaacactcaatcaacttttaccctctccaatgg 33935075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 1775403 - 1775121
Alignment:
Q  19 taaatcccataaggaagacacatacgcaataggacataaaacactaaccccacaaatattagtactatagctataatag---ccattctcaacactcaat 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  1775403 taaatcccataaggaagacacatacgcaataggacataaaacactagccccacaaatattagtactatagctataatagatgccattctcaacactcaat 1775304  T
Q  116 gatgcaaagactaaaaaatttctaaacgtgaagcttcatttatcagtttgaatatttataagacaaccttttaaattagcaaagattttcgtcactttct 215  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||      
T  1775303 gatgcaaaaactaaaaaatttctaaacgtgaagcttcattcatcagtttgaatatttataagacagccctttaaattagcaaagattttcgtcacttt-- 1775206  T
Q  216 actatgtagtaccaaaaatctaccaaagagaaagataactataagtaaaaagtaaagtacaagaaacagtgagccagaaggtaact 301  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1775205 -ctatgtagtaccaaaaatctaccaaagagaaagttaactataagtaaaaagtaaagtacaagaaacagtgagccagaaggtaact 1775121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 631532 - 631600
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  631532 attcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 631600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 8660573 - 8660641
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  8660573 attcccaacactccacatcattttctctctcttaattcaacacacattcaatttttacctctccaatgg 8660641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 34838595 - 34838663
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  34838595 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 34838663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 8669909 - 8669972
Alignment:
Q  354 caacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  8669909 caacacttcacattattttctctctcttaattcaacacccattcaatttttacctctccaatgg 8669972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 12501846 - 12501913
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  12501846 attctcaacaatccacatcattttctctctcttaattcaacacccattcaatttttacctctctaatg 12501913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 353 - 416
Target Start/End: Original strand, 12512931 - 12512994
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  12512931 tcaacattccacatcattttttctctcttaattcaacacccattcaatttttacctctccaatg 12512994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 10883899 - 10883953
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  10883899 cacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 10883953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 30446271 - 30446325
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  30446271 cacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 30446325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 26654376 - 26654327
Alignment:
Q  366 tcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26654376 tcattttctctctcataattcaacacccattcaatttttacctctccaat 26654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 26760346 - 26760297
Alignment:
Q  366 tcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26760346 tcattttctctctcataattcaacacccattcaatttttacctctccaat 26760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 34328295 - 34328363
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  34328295 attcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 34328363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 8218960 - 8219027
Alignment:
Q  350 ttctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||| | ||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  8218960 ttctcaacactccacattattttctctctcttaattcaacacccattcaacttttacctctccaatgg 8219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 417
Target Start/End: Complemental strand, 24933337 - 24933271
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattca--atttttacctctccaatgg 417  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  24933337 tcaacactccacattattttctctctcataattcaacactcattcaatatttttacctctccaatgg 24933271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 197818 - 197885
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | ||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  197818 attcccaacactccacgtcattttctctctcttaattcaacacccattcaatttttacatctccaatg 197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 2503257 - 2503307
Alignment:
Q  365 atcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  2503257 atcattttctctct--taattcaacacccattcaatttttacctctccaatgg 2503307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 17961321 - 17961253
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| |||||||||||| ||||||||||  ||| |||||||||||||||||||||    
T  17961321 attcccaacactccacataattttctctctcttaattcaacaaacatacaatttttacctctccaatgg 17961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 24348447 - 24348515
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||  ||||||||||  |||||||||||||||||| ||||||    
T  24348447 attcccaacactccacatcattttctctcttttaattcaacatccattcaatttttacctcttcaatgg 24348515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 32359760 - 32359826
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaat 415  Q
    |||| ||||||| |||||||||||||||||| | ||||||||||||||| ||||||| ||||||||||    
T  32359760 attcccaacattccacatcattttctctctc-ttattcaacactcattccatttttaccctctccaat 32359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 6380546 - 6380478
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | ||||||||| ||||||| ||||| ||||||||||||    
T  6380546 attcccaacactccacatcattttctctctc-ttattcaacacacattcaacttttaccctctccaatgg 6380478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 29428575 - 29428519
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttac 406  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||||    
T  29428575 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttac 29428519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 3e-78; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 470 - 720
Target Start/End: Complemental strand, 21469978 - 21469724
Alignment:
Q  470 ctgttagaataaaatcctagtttataggagaggacttggtctttaagaaattaatttgtatttgttttaatttgtttcagttgccactcaccactagcct 569  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  21469978 ctgttagaataaaattctagtttataggagaagacttagtctttatgaatttaatttttatttgttttaatttgtttcagttactactcaccactagcct 21469879  T
Q  570 ttatt---ctagctaagtgggttgctttcagttgtgttttttatcgtgtgttgaatggctatttaagccaacattgcaattaat-aaaattgagtcattt 665  Q
    |||||    |||||||||||||||||||| |||||  |||| ||| |||||| || |||||||||||||||||||||||| ||| |||| |||||||||     
T  21469878 ttattttagtagctaagtgggttgctttcggttgttgttttcatcatgtgttaaaaggctatttaagccaacattgcaatcaataaaaactgagtcattc 21469779  T
Q  666 agtccaattgttgtgttctttgctatcagtttccaaacgcttaaacacaggttct 720  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21469778 agtccaattgttgtgttctttgctatcagtttccaaacacttaaatacaggttct 21469724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 17485833 - 17485900
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17485833 attcccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctctaatg 17485900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 24997096 - 24997162
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24997096 attcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaat 24997162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 417
Target Start/End: Complemental strand, 1073137 - 1073073
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1073137 tcaacactccacttcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 1073073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 4296829 - 4296761
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4296829 attcccaacactccacattattttctctctcttaattcaacactcattcaatttttacctctccaatgg 4296761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 12855035 - 12855103
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  12855035 attcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 12855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 22351672 - 22351604
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  22351672 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 22351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 30822641 - 30822573
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  30822641 attcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatgg 30822573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 43021757 - 43021825
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  43021757 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 43021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 9117845 - 9117896
Alignment:
Q  366 tcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9117845 tcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 9117896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 8852073 - 8852141
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||    
T  8852073 attcccaacactccacatcattttctctctcttaattcaacactcatttaatttttatctctccaatgg 8852141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 17929313 - 17929245
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  17929313 attcccaacactccacatcattttctctctcataatttaacacccattcaatttttacatctccaatgg 17929245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 36209532 - 36209464
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||| | ||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  36209532 attctcaacactccacatcattttctctttcttaattcaacactcattcaatttttatctctcctatgg 36209464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 353 - 415
Target Start/End: Original strand, 44280012 - 44280074
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||| | |||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  44280012 tcaacactccacatcattttctctctcttaattcaacaccctttcaatttttacctctccaat 44280074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 7763545 - 7763489
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta 405  Q
    |||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||    
T  7763545 attctcaacactccacatcattttctctctcttaattcaacacccattcaattttta 7763489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 313 - 416
Target Start/End: Original strand, 39490116 - 39490226
Alignment:
Q  313 aatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta 405  Q
    ||||| |||| | |||||||||| ||||||||||||       |||| ||||| | || |||||| |||||||| |||||||||||||||||||||||||    
T  39490116 aatggtaaaaaaatttcaatacccttcaacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaattttta 39490215  T
Q  406 cctctccaatg 416  Q
     ||||||||||    
T  39490216 tctctccaatg 39490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 1308742 - 1308687
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||    
T  1308742 cacatcattttctctctcataatccaacacacatttaatttttacttctccaatgg 1308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 7588562 - 7588492
Alignment:
Q  349 attctcaacatttcacatcattttctctctca--taattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  7588562 attcccaacactccacatcattttctctctctcttaattcaacacccattcaatttttacctctccaatgg 7588492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 14382996 - 14383051
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| |||||||||||   |||||||||||||||||||||||    
T  14382996 cacatcattttctctctcttaattcaacaccttttcaatttttacctctccaatgg 14383051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 6362983 - 6363027
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaatttttacc 407  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  6362983 acatcattttctctctcttaattcaacactcattcaacttttacc 6363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 36526837 - 36526904
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | ||||| |||||||||||| ||||| ||||| |||| |||||||||||||||||||    
T  36526837 attcccaacactccacattattttctctctcttaatttaacacccatttaatttttacctctccaatg 36526904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 9074282 - 9074214
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  9074282 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 9074214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 37245517 - 37245585
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  37245517 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 37245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 1987135 - 1987202
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatg 416  Q
    |||||||||| | ||||||||||||| |||| || |||||||||||||||| ||||| |||||||||||    
T  1987135 attctcaacactccacatcattttctatctctta-ttcaacactcattcaacttttaccctctccaatg 1987202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 14152125 - 14152067
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc 407  Q
    |||| ||||| | |||||||||||||||||  ||||||||||| ||||||| |||||||    
T  14152125 attcccaacactccacatcattttctctcttttaattcaacacccattcaacttttacc 14152067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 927949 - 927893
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttac 406  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||||    
T  927949 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttac 927893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 407
Target Start/End: Complemental strand, 5146756 - 5146711
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacc 407  Q
    |||||||||||||||||| | |||||||||||||| || |||||||    
T  5146756 cacatcattttctctctctttattcaacactcatttaacttttacc 5146711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 13151542 - 13151473
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | ||||| ||||| | |||| ||||||||||||||||||| ||||| ||||||||||||    
T  13151542 attcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctccaatgg 13151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 3e-56; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 476 - 703
Target Start/End: Complemental strand, 30741824 - 30741593
Alignment:
Q  476 gaataaaatcctagtttataggagaggacttggtctttaagaaattaatttgtatttgtttt-aatttgtttca-gttgccactcaccactagcctttat 573  Q
    |||||| |||||||||||||||| | || |||||||||| |||||||||||||||||||||| ||||||||||  ||| | ||||||||||||| |||||    
T  30741824 gaataacatcctagtttataggaaaagatttggtctttaggaaattaatttgtatttgtttttaatttgtttcctgttactactcaccactagcttttat 30741725  T
Q  574 tctagctaagtgggttgctttcagttgt-gttttttatcgtgtgttgaatggctatttaagccaacattgcaattaat-aaaattgagtcatttagtcca 671  Q
    | ||||||| |||||||| ||| ||| | |||||| |||||||||||||||| ||||||||||||| ||||||||||| |||| ||||| |||||||| |    
T  30741724 tttagctaactgggttgcattctgttattgtttttcatcgtgtgttgaatggttatttaagccaacgttgcaattaataaaaactgagtaatttagtcta 30741625  T
Q  672 attgttgtgttctttgctatcagtttccaaac 703  Q
    |||||||||||||||||| | |||||||||||    
T  30741624 attgttgtgttctttgctttgagtttccaaac 30741593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 304 - 415
Target Start/End: Original strand, 40283437 - 40283555
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||       |||| ||||| | |||||||||||||||||||||||||||||| ||||    
T  40283437 accatgtacaatggaaaaaaaatttcaatacctttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccatt 40283536  T
Q  397 caatttttacctctccaat 415  Q
    |||||||||||||||||||    
T  40283537 caatttttacctctccaat 40283555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 43524500 - 43524381
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||||||||||||  ||| | |||||||||| ||||||| ||||       |||| ||||| | |||||||||||||||||||||||||||||||||||    
T  43524500 accatgtacaatggttaaaaaatttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcatt 43524401  T
Q  397 caatttttacctctccaatg 416  Q
    ||||||||||||||||||||    
T  43524400 caatttttacctctccaatg 43524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 1958289 - 1958169
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||  ||||||| | ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||| ||||    
T  1958289 accatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 1958190  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  1958189 caatttttacctctccaatgg 1958169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 304 - 417
Target Start/End: Original strand, 13947328 - 13947448
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||| ||||||| |||| | |||||||||| ||||||||| ||       |||| ||||| | ||||||||||||| |||||||||||||||| ||||    
T  13947328 accatgaacaatggtaaaaaaatttcaatacccttcaacacctactttttcaattcccaacactccacatcattttctttctcataattcaacacccatt 13947427  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  13947428 caatttttacctctccaatgg 13947448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 26244511 - 26244577
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26244511 attcccaacactccacatcattttctctctcataattcaacacacattcaatttttacctctccaat 26244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 35099463 - 35099516
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35099463 acatcattttctctctcttaattcaacactcattcaatttttacctctccaatg 35099516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 1634898 - 1634830
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  1634898 attctcaacactccacatcattttctctctcataattcaacacccattcagtttttacctctctaatgg 1634830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 417
Target Start/End: Complemental strand, 12272535 - 12272471
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12272535 tcaacactccacttcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 12272471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 42859939 - 42860007
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  42859939 attcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacatctccaatgg 42860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 45101082 - 45101014
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  45101082 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 45101014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 43525133 - 43525078
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  43525133 cacatcattttctctcttttaattcaacactcattcaatttttacctctccaatgg 43525078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 44149889 - 44149952
Alignment:
Q  354 caacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  44149889 caacattccacatcattttctctttcataattcaatacccattcaatttttacctctccaatgg 44149952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 415
Target Start/End: Original strand, 29731659 - 29731774
Alignment:
Q  306 catgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattca 398  Q
    ||||||||||||||||| | |||||||||| ||||||||||||       |||| ||||| | ||| ||||||| |||||||||||||||||| ||||||    
T  29731659 catgtacaatgggaaaaaaatttcaatacccttcaacacccactttttcaattcccaacactccacgtcatttt-tctctcataattcaacacccattca 29731757  T
Q  399 atttttacctctccaat 415  Q
    ||||||| |||||||||    
T  29731758 atttttaactctccaat 29731774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 368 - 417
Target Start/End: Original strand, 23549746 - 23549795
Alignment:
Q  368 attttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23549746 attttctctctcataattcaacacccattcaatttttacctctccaatgg 23549795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 43618406 - 43618338
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  43618406 attcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacctctccaatgg 43618338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 15053661 - 15053714
Alignment:
Q  364 catcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  15053661 catcattttctctctcttaattcaacacccattcaatttttaccactccaatgg 15053714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 35931889 - 35931942
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  35931889 cacatcattttctctctcttaattcaacaccctttcaatttttacctctccaat 35931942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 31129560 - 31129502
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc 407  Q
    |||||||||| | |||||||||||||||||| |||||| |||||||||||| |||||||    
T  31129560 attctcaacactccacatcattttctctctcttaattcgacactcattcaacttttacc 31129502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 5735315 - 5735369
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  5735315 acatcattttctctctctta-ttcaacactcattcaatttttaccctctccaatgg 5735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 18029556 - 18029488
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  18029556 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 18029488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 34955723 - 34955655
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  34955723 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 34955655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 5212305 - 5212372
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| |||||||||||    
T  5212305 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatg 5212372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 44503181 - 44503249
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||| |||||||||||||| ||||| ||||| ||||||||||||| |||| ||||||    
T  44503181 attcccaacactccacgtcattttctctctcttaattgaacacccattcaatttttatctcttcaatgg 44503249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 36912445 - 36912499
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    ||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  36912445 acatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 36912499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 41477197 - 41477265
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc-tctccaatgg 417  Q
    |||| ||||| | ||| |||||||||||||| || |||||||||||||||| ||||||| ||||||||||    
T  41477197 attcccaacactccacgtcattttctctctctta-ttcaacactcattcaacttttaccatctccaatgg 41477265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 45081521 - 45081401
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||||||||||||||||||||||||||||| ||||||||||||       |||| ||||| | |||||||||||||||||||||||||||||||||||    
T  45081521 accatgtacaatgggaaaatattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcatt 45081422  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  45081421 caatttttacctctccaatgg 45081401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 13094499 - 13094381
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||||||||||||||||| |||||||||||| |||||||||||        |||| ||||| | |||||||||||||||||||||||||||||| ||||    
T  13094499 accatgtacaatgggaaaaaattttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctcataattcaacacccatt 13094400  T
Q  397 caatttttacctctccaat 415  Q
    ||||||||| |||||||||    
T  13094399 caatttttatctctccaat 13094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 415
Target Start/End: Original strand, 35809126 - 35809244
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||||||||| | |||| | |||||||||| ||||||| ||||       |||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  35809126 accatgtacaatagaaaaaaaatttcaatacccttcaacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacccatt 35809225  T
Q  397 caatttttacctctccaat 415  Q
    |||||||||||||||||||    
T  35809226 caatttttacctctccaat 35809244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 48403944 - 48403890
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48403944 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 48403890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 305 - 415
Target Start/End: Original strand, 4981473 - 4981590
Alignment:
Q  305 ccatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattc 397  Q
    |||||||||||||||||| | |||||||| | ||||||||||||       |||| ||||| | ||||||||||||||||||||||||||||||  |||     
T  4981473 ccatgtacaatgggaaaaaaatttcaatatccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacacctattt 4981572  T
Q  398 aatttttacctctccaat 415  Q
    ||||||||||||||||||    
T  4981573 aatttttacctctccaat 4981590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 52017373 - 52017427
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52017373 acatcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 52017427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 34464075 - 34464014
Alignment:
Q  354 caacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  34464075 caacatttcacatcattttctctctcttaattcaacaccctttcaatttttacctctccaat 34464014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 2215339 - 2215271
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2215339 attcccaacactccacataattttctctctcttaattcaacactcattcaatttttacctctccaatgg 2215271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 3533364 - 3533296
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  3533364 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 3533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 6290615 - 6290683
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6290615 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 6290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 8991798 - 8991866
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  8991798 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 8991866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 33604672 - 33604740
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  33604672 attcccaacactccacatcattttctctatcttaattcaacactcattcaatttttacctctccaatgg 33604740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 38173570 - 38173638
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  38173570 attcccaacactccacatcattttctctctcttaattcaacactcatccaatttttacctctccaatgg 38173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 40721050 - 40721118
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  40721050 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 40721118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 46917568 - 46917500
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  46917568 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 46917500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 417
Target Start/End: Complemental strand, 48506659 - 48506595
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  48506659 tcaacactccacatcattttctctctcttaattcaacactcattcaatttttaactctccaatgg 48506595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 34199326 - 34199259
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  34199326 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 34199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 23540469 - 23540416
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23540469 acatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 23540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 3618510 - 3618442
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  3618510 attcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacctctccaatgg 3618442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 23389986 - 23389918
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  23389986 attcccaacactccacattattttctctctcataattcaatactcattcaattgttacctctccaatgg 23389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 55560536 - 55560468
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  55560536 attcccaacactccacatcattttctctctcttaattcaacacctattcaatttttacctctccaatgg 55560468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 19272798 - 19272864
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  19272798 attcccaacactccacatcattttctctctcataattcaacatccattcaatttttatctctccaat 19272864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 31336411 - 31336346
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaa 414  Q
    |||||||||| | ||| |||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  31336411 attctcaacactccacgtcattttctctctcttaattcaacaccctttcaatttttacctctccaa 31336346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 13110576 - 13110644
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  13110576 attcccaacactccacaacattttttctctcttaattcaacacccattcaatttttacctctccaatgg 13110644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 16020862 - 16020930
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  16020862 attcccaacactccacattattttctctctcttaattcaacatccattcaatttttacctctccaatgg 16020930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 28899347 - 28899415
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||| ||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  28899347 attcccaatattccacatcgttttctctctcttaattcaacacccattcaatttttacctctctaatgg 28899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 353 - 415
Target Start/End: Complemental strand, 16175068 - 16175006
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||| | |||||||||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  16175068 tcaacactccacatcattttctcactcttaattcaacaccctttcaatttttacctctccaat 16175006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 27863730 - 27863796
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||| | ||| ||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  27863730 attctcaacactccacgtcattttctctgttataattcaacatccattcaatttttacctctccaat 27863796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 27142369 - 27142319
Alignment:
Q  365 atcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  27142369 atcattttctctct--taattcaacacccattcaatttttacctctccaatgg 27142319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 17329965 - 17329901
Alignment:
Q  354 caacatttcacatcattttctctctcataattcaacactcattcaat-ttttacctctccaatgg 417  Q
    ||||||| |||||||||||||||||||||||||||||   ||||||| ||||||||| |||||||    
T  17329965 caacattccacatcattttctctctcataattcaacatctattcaattttttacctccccaatgg 17329901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 33523285 - 33523353
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaa-tttttacctctccaatg 416  Q
    |||| ||||||| |||||||||||||||||| ||||||||||  ||||||| |||||| ||||||||||    
T  33523285 attcccaacattccacatcattttctctctcttaattcaacatccattcaattttttatctctccaatg 33523353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 53348114 - 53348050
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatg 416  Q
    ||||||||||||||||||||||||||| | |||||||| ||||| || ||||| |||||||||||    
T  53348114 tcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctccaatg 53348050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 33077917 - 33077863
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||    
T  33077917 cacatcattttctctctt-taatttaacacccattcaatttttacctctccaatgg 33077863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 56054032 - 56054098
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||| |||||| |||| |||||||||||| |||||||||||    
T  56054032 attcccaacactccacatcattttctctctcttaattctacacccattcaattttt-cctctccaatg 56054098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 18469425 - 18469356
Alignment:
Q  349 attctcaacatttcacatcattttct-ctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||| | ||||| ||||||||||  |||||||||||||||||||||||||    
T  18469425 attcccaacactccacatcatttttttctctcttaattcaacatccattcaatttttacctctccaatgg 18469356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 53184153 - 53184085
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| |||||||||||||||||||| | ||||||||||||||||| ||| | ||||||||||||    
T  53184153 attcccaacacttcacatcattttctctctc-ttattcaacactcattcaactttaaccctctccaatgg 53184085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 52772781 - 52772834
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    ||||| |||||||||||  ||||||||||| | ||||||||||| |||||||||    
T  52772781 cacattattttctctcttttaattcaacaccctttcaatttttatctctccaat 52772834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 66181 - 66063
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||       |||||||||| | |||||||||||||||||||||||||||||||||||    
T  66181 accatgtacaatgggaaaaaaatttcaataccttttaacacctactttttcaattctcaacactccacatcattttctctctcataattcaacactcatt 66082  T
Q  397 caatttttacctctccaat 415  Q
    |||||||||||||| ||||    
T  66081 caatttttacctcttcaat 66063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 23089500 - 23089600
Alignment:
Q  324 attttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||||| ||||||||||||       |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23089500 attttcaatacccttcaacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaatttttacctctccaatg 23089599  T
Q  417 g 417  Q
    |    
T  23089600 g 23089600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 3454698 - 3454816
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||||| |||||||||| | |||||||||| ||||||| ||||       |||||||||| | |||||||||||||||||||||||||||||||||||    
T  3454698 accatgtataatgggaaaaaaatttcaatacccttcaacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcatt 3454797  T
Q  397 caatttttacctctccaatg 416  Q
    ||||||||| ||||||||||    
T  3454798 caattttta-ctctccaatg 3454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 29619121 - 29619003
Alignment:
Q  306 catgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattca 398  Q
    |||||||||||| |||| | |||||||||| ||||||||||||       |||| ||||| | ||||||||||||| |||||||||||||||| ||||||    
T  29619121 catgtacaatggcaaaaaaatttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattca 29619022  T
Q  399 atttttacctctccaatgg 417  Q
    |||||||||||||||||||    
T  29619021 atttttacctctccaatgg 29619003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 25671015 - 25670895
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||||||||||||  | | |||||||||| | ||||||||||||       |||| ||||| | |||||||||||||||||||||||||||||||||||    
T  25671015 accatgtacaatggttacaaattttcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcatt 25670916  T
Q  397 caatttttacctctccaatgg 417  Q
    ||||||||| |||||||||||    
T  25670915 caatttttaactctccaatgg 25670895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 13479934 - 13479815
Alignment:
Q  304 accatgtacaatgggaaaatatt-ttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcat 395  Q
    ||||||||||||||||||| |   ||||||||| ||||||||||||       |||| ||||| | ||||||||||||||||||||||||||||||||||    
T  13479934 accatgtacaatgggaaaaaaaaattcaatacccttcaacacccacttttttaattcccaacactccacatcattttctctctcataattcaacactcat 13479835  T
Q  396 tcaatttttacctctccaat 415  Q
    ||||||||||| ||||||||    
T  13479834 tcaatttttacatctccaat 13479815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 19241330 - 19241398
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  19241330 attctcaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 19241398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 31013901 - 31013833
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31013901 attcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 31013833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 32976685 - 32976565
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||  ||||||| | ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||| ||||    
T  32976685 accatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 32976586  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  32976585 caatttttacctctccaatgg 32976565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 31008442 - 31008374
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  31008442 attctcaacacttcacatcattttctctctcttaatttaacacccattcaatttttacctttccaatgg 31008374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 304 - 415
Target Start/End: Original strand, 40888856 - 40888974
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||  ||||||| | ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||| ||||    
T  40888856 accatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatt 40888955  T
Q  397 caatttttacctctccaat 415  Q
    |||||||||||||||||||    
T  40888956 caatttttacctctccaat 40888974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 27942518 - 27942573
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  27942518 cacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 27942573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 42807057 - 42806989
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||    
T  42807057 attctcaacactccacatcattttctctctcttaattcaacacccattcaatttttacatctctaatgg 42806989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 30648157 - 30648102
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  30648157 cacaccattttatctctcttaattcaacactcattcaatttttacctctccaatgg 30648102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 39238428 - 39238494
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  39238428 attcccaacactccacatcattttctctctcataattcaacatccattcaatttttatctctccaat 39238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 417
Target Start/End: Complemental strand, 4219530 - 4219434
Alignment:
Q  324 attttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||||| ||||||||||||       |||| ||||| ||||||||||||||||    |||||||||||| ||||||||||||||||||||||||    
T  4219530 attttcaatacccttcaacacccactttttcaattcccaacacttcacatcattttctc----ataattcaacacccattcaatttttacctctccaatg 4219435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 7651017 - 7651085
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||    
T  7651017 attcccaacactccacatcattttctctctcttaattcaacacccatttaatttttacccctccaatgg 7651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 36572464 - 36572409
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||    
T  36572464 cacatcattttctctctcttaattcaacacccattcaatttttatttctccaatgg 36572409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 365 - 415
Target Start/End: Original strand, 42317918 - 42317968
Alignment:
Q  365 atcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  42317918 atcattttctctctcttaattcaacaccctttcaatttttacctctccaat 42317968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 25652827 - 25652895
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||||| |||||||| ||||||||||||    
T  25652827 attcccaacacttcacatcattttctctctc-ttattcaacactcattgaatttttaccctctccaatgg 25652895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 27407100 - 27407032
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattc-aacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | ||||| |||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  27407100 attcccaacactccacattattttctctctcttaattctaacactcattcaacttttacctctccaatg 27407032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 39008514 - 39008562
Alignment:
Q  369 ttttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  39008514 ttttctctctcataattcaacatccattcaatttttacatctccaatgg 39008562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 41153063 - 41153005
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacct 408  Q
    |||||||||| | |||||||||||||||||| | ||||||||||||||||| ||||||||    
T  41153063 attctcaacactccacatcattttctctctc-ttattcaacactcattcaacttttacct 41153005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 4938213 - 4938267
Alignment:
Q  363 acatcattttctctctcataattcaacactcattcaattttta-cctctccaatg 416  Q
    ||||||||||||||||| |||||||||||| |||||| ||||| |||||||||||    
T  4938213 acatcattttctctctcttaattcaacactaattcaacttttaccctctccaatg 4938267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 4577019 - 4577087
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  4577019 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 4577087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 8176360 - 8176292
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  8176360 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 8176292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 408
Target Start/End: Original strand, 34709895 - 34709950
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacct 408  Q
    |||||||| ||| ||||||| |||||| ||||||||||| |||| |||||||||||    
T  34709895 tcaacattccacgtcattttttctctcttaattcaacacccatttaatttttacct 34709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 353 - 411
Target Start/End: Complemental strand, 32363668 - 32363610
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctc 411  Q
    |||||| | ||||| |||||||||||  ||||||||||| |||| ||||||||||||||    
T  32363668 tcaacactccacattattttctctcttttaattcaacacccatttaatttttacctctc 32363610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 14278843 - 14278911
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||| |||||||| ||||| ||||||||||||    
T  14278843 attcccaacactccacatcattttctctctc-ttattcaacattcattcaacttttaccctctccaatgg 14278911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 407
Target Start/End: Original strand, 25032380 - 25032424
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacc 407  Q
    |||||||||||||||||| || |||||||||||||||| |||||||    
T  25032380 cacatcattttctctctctta-ttcaacactcattcaacttttacc 25032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 35029166 - 35029098
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35029166 attcccaacattccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 35029098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 45549728 - 45549610
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||||||||||||||||| | |||||||||| ||||||| ||||       |||| ||||| | ||||||||||| |||||||||||||||||| ||||    
T  45549728 accatgtacaatgggaaaaaaatttcaatacccttcaacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacccatt 45549629  T
Q  397 caatttttacctctccaat 415  Q
    |||||||||||||||||||    
T  45549628 caatttttacctctccaat 45549610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 304 - 417
Target Start/End: Original strand, 36518478 - 36518598
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||  ||||||| | ||||||||||||       |||| ||||| | |||||||||||||||||| ||||||||||||||||    
T  36518478 accatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatt 36518577  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  36518578 caatttttacctctccaatgg 36518598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 40302548 - 40302480
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40302548 attcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgg 40302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 39769757 - 39769812
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39769757 cacatcattttctctctcataattcaacactcattcaatttttacctctctaatgg 39769812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 30566615 - 30566681
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  30566615 attctcaacactccacatcattttctctctcttaattcaacactcattcaatttttatctctccaat 30566681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 5813113 - 5813181
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  5813113 attcccaacactgcacatcattttctctctcttaattcaacacttattcaatttttacctctccaatgg 5813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 47159552 - 47159484
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  47159552 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 47159484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 33508566 - 33508517
Alignment:
Q  366 tcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33508566 tcattttctctctcttaattcaacactcattcaatttttacctctccaat 33508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 32130328 - 32130260
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||||||||| || || |||||||||||||||||||||||||    
T  32130328 attcccaacactccacatcattttctctctcataatttaatacccattcaatttttacctctccaatgg 32130260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 42881373 - 42881441
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  42881373 attcccaacactccacatcattttctctctcttaattcaacaccaattcaatttttacctctccaatgg 42881441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 20354251 - 20354306
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  20354251 cacatcattttttctatcataattcaacacccattcaatttttacctctccaatgg 20354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 30720148 - 30720203
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  30720148 cacatcattttctctctcttaattcaacacccattcaatttttacctcttcaatgg 30720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 32748812 - 32748879
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||    
T  32748812 attcccaacactccacattattttctctctcataatttaacactcattcaatttttacatctccaatg 32748879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 304 - 417
Target Start/End: Original strand, 26812076 - 26812196
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    |||||||||||||| |||| | |||||||||| |||||||||||        |||| ||||| | || |||||||| ||| ||||||||||| |||||||    
T  26812076 accatgtacaatggcaaaaaaatttcaatacccttcaacacccattttttcaattcccaacactccatatcattttatctttcataattcaatactcatt 26812175  T
Q  397 caatttttacctctccaatgg 417  Q
    ||| |||||||||||||||||    
T  26812176 caaattttacctctccaatgg 26812196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 38351607 - 38351660
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  38351607 cacatcattttctctttcataattcaacattcatttaatttttacctctccaat 38351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 415
Target Start/End: Complemental strand, 33078823 - 33078776
Alignment:
Q  368 attttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  33078823 attttctctctcttaattcaacattcattcaatttttacctctccaat 33078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 37951788 - 37951832
Alignment:
Q  373 ctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||    
T  37951788 ctctctcttaattcaacacccattcaatttttacctctccaatgg 37951832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 22191248 - 22191303
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  22191248 cacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 22191303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 22656695 - 22656750
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||  ||||||||||  |||| ||||||||||||| ||||||    
T  22656695 cacatcattttctctcttttaattcaacatccatttaatttttacctcttcaatgg 22656750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 25038639 - 25038582
Alignment:
Q  360 ttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||| ||||||||||||    
T  25038639 ttcacatcattttctctctc-ttattcgacactcattcaagttttaccctctccaatgg 25038582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 37887862 - 37887928
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | ||||||||||| |||||| ||||||||||  |||| ||||||||||||| ||||    
T  37887862 attcccaacactccacatcattttatctctcttaattcaacatccatttaatttttacctcttcaat 37887928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 114505 - 114573
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||||||||| | |||||||||||||||||| | |||||||||||||| || ||||| | ||||||||||    
T  114505 attctcaacactccacatcattttctctctc-ttattcaacactcatttaacttttatcatctccaatgg 114573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 22737652 - 22737584
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacc-tctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||| |||||||| ||||||| ||||||||||    
T  22737652 attcccaacactccacatcattttctctctc-ttattcaacattcattcaacttttaccttctccaatgg 22737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 51494581 - 51494461
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||| ||||| | | ||||||||||||       |||||||||| | |||||||||||||||||| |||||||||| |||||    
T  51494581 accatttacaatggtaaaatatattcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattcatt 51494482  T
Q  397 caatttttacctctccaatgg 417  Q
    |||||||||||||||||||||    
T  51494481 caatttttacctctccaatgg 51494461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 48404342 - 48404409
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48404342 attcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatg 48404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 31159399 - 31159467
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  31159399 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 31159467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 36230369 - 36230437
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  36230369 attcccaacacttcacatcattttatctctcttaattcaacacccattcaatttttacctctccaatgg 36230437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 37822581 - 37822649
Alignment:
Q  349 attctcaacatttcacatcattttctctc-tcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||||||||| | |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  37822581 attctcaacactccacatcattttctctcctcttaattcaacactcattcaatttttacctctccaatg 37822649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 45239150 - 45239218
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  45239150 attcccaacactccacatcattttctctctctttattcaacactcattcaatttttacctctccaatgg 45239218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 45456208 - 45456140
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45456208 attcccaacactccacataattttctctctcttaattcaacactcattcaatttttacctctccaatgg 45456140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 48388165 - 48388097
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  48388165 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgg 48388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 37646617 - 37646550
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  37646617 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 37646550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 19578967 - 19578901
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  19578967 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaat 19578901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 31468145 - 31468211
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||| ||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  31468145 attcccaacactccacatcattttctctctcttaattcaacattcattcaatttttacctctccaat 31468211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 23092729 - 23092848
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||| |||||||||  |||||||||||       |||| ||||| | ||| |||||||||||||| ||||||||||| ||||    
T  23092729 accatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccatt 23092828  T
Q  397 caatttttacctctccaatg 416  Q
    || |||||||||||||||||    
T  23092829 cagtttttacctctccaatg 23092848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 2478385 - 2478317
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  2478385 attcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacctctccaatgg 2478317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 27630517 - 27630449
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  27630517 attcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 27630449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 362 - 410
Target Start/End: Complemental strand, 35847165 - 35847117
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctct 410  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35847165 cacatcattttctctctcataattcaacacccattcaatttttacctct 35847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 37420401 - 37420333
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  37420401 attcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatgg 37420333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 417
Target Start/End: Complemental strand, 51156997 - 51156877
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac--------attctcaacatttcacatcattttctctctcataattcaacactcat 395  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||        ||| |||||| | ||  |||||||||||||||||||| ||||| |||    
T  51156997 accatgtacaatgggaaaaaattttcaatacccttcaacactcacttttttcaattttcaacactccatgtcattttctctctcataatttaacacccat 51156898  T
Q  396 tcaatttttacctctccaatgg 417  Q
    |||| |||||||||||||||||    
T  51156897 tcaa-ttttacctctccaatgg 51156877  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 365 - 415
Target Start/End: Original strand, 14096719 - 14096769
Alignment:
Q  365 atcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  14096719 atcattttatctctcttaattcaacactcattcaatttttacctctccaat 14096769  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 8464111 - 8464179
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttac-ctctccaatgg 417  Q
    |||||||||| | |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  8464111 attctcaacactccacatcattttctctctctta-ttcaacactcattcaatttttactctctccaatgg 8464179  T

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Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 30878588 - 30878535
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaat 415  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  30878588 cacatcattttctctctcttaattcaacatccattcaatttttacctctccaat 30878535  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 37691347 - 37691279
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | ||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  37691347 attcccaacactccacattattttctctctcttaattcaacatccattcaatttttacctctccaatgg 37691279  T

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Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 29523715 - 29523782
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||| | |||||||||||||||||| ||||||||||  |||||||||||||| |||||||||    
T  29523715 attcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacatctccaatg 29523782  T

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Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 33164424 - 33164491
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    |||| ||||||| || || ||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  33164424 attcccaacattccagattattttatctctcttaattcaacactcattcaatttttacatctccaatg 33164491  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 45623574 - 45623519
Alignment:
Q  362 cacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||    
T  45623574 cacatcattttctctctcttaattcaacactcatttaatttttatctctcctatgg 45623519  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 17783389 - 17783457
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttac-ctctccaatgg 417  Q
    |||| ||||||| |||||||||||||||||| | ||||||||||||||||| |||||| |||||||||||    
T  17783389 attcccaacattccacatcattttctctctc-ttattcaacactcattcaacttttactctctccaatgg 17783457  T

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Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 44334301 - 44334369
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttac-ctctccaatgg 417  Q
    |||||||||| | |||||||||||||||||| | ||||||||||||||||| |||||| |||||||||||    
T  44334301 attctcaacactccacatcattttctctctc-ttattcaacactcattcaacttttactctctccaatgg 44334369  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 44929347 - 44929279
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    ||||||||||||||| ||||||||||||||  | ||||||||||||||||| ||||| ||||||||||||    
T  44929347 attctcaacatttcaaatcattttctctct-tttattcaacactcattcaacttttaccctctccaatgg 44929279  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 47300554 - 47300487
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatg 416  Q
    ||||||| || | |||||||||||||||||  ||||||||||| |||||||||||||| | |||||||    
T  47300554 attctcagcactccacatcattttctctcttttaattcaacacacattcaatttttacttttccaatg 47300487  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 411
Target Start/End: Original strand, 8468336 - 8468398
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctc 411  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||| || |||||||||||    
T  8468336 attcccaacactccacatcattttctctctcttaattcaacacacatttaacttttacctctc 8468398  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 29919398 - 29919451
Alignment:
Q  365 atcattttctctctcataattcaacactcattcaa-tttttacctctccaatgg 417  Q
    ||||||||||||||| |||||||||||  |||||| ||||||||||||||||||    
T  29919398 atcattttctctctcttaattcaacacctattcaattttttacctctccaatgg 29919451  T

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Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 44451327 - 44451259
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  44451327 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 44451259  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 44651085 - 44651153
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  44651085 attcccaacactccacatcattttctctctctta-ttcaacactcattcaacttttaccctctccaatgg 44651153  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 51520233 - 51520298
Alignment:
Q  353 tcaacatttcacatcattttctctctcataattcaacactcattcaattttta-cctctccaatgg 417  Q
    |||||| | ||||||||||| |||||| ||||| |||||| |||||| ||||| ||||||||||||    
T  51520233 tcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctccaatgg 51520298  T

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Target: scaffold0054 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 57800 - 57732
Alignment:
Q  349 attctcaacatttcacatcattttctctctcataattcaacactcattcaatttttacctctccaatgg 417  Q
    |||| ||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  57800 attcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctcttcaatgg 57732  T

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Target: scaffold0362 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 5432 - 5316
Alignment:
Q  304 accatgtacaatgggaaaatattttcaatacctttcaacacccac-------attctcaacatttcacatcattttctctctcataattcaacactcatt 396  Q
    ||||| |||||||| ||||||| |||||||||  |||||||||||       |||| ||||| | ||||||||||||||| || ||||||||||  ||||    
T  5432 accatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacatcattttctctttcttaattcaacatccatt 5333  T
Q  397 caatttttacctctcca 413  Q
    |||||||||||||||||    
T  5332 caatttttacctctcca 5316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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