View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19757_high_73 (Length: 317)
Name: NF19757_high_73
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_high_73 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 51191248 - 51190932
Alignment:
| Q |
1 |
acaggtaaagttatcatatcatatcagtgtggggactattaacaataaattactacaaaaattataagacaaagttcaaagcttttgaaattgtcttcat |
100 |
Q |
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| T |
51191248 |
acaggtaaagttatcatatcatatcagtgtggggactattaacaataaattactacaaaaatcataagacaaagttcaaagcttttgaaattgtcttcat |
51191149 |
T |
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| Q |
101 |
tcatcatacatactacactactagagataccataccaaatatgcttaagtagagaaaaatccagagagaaaaacccttaatcatatacacaatagtccac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51191148 |
tcatcatacatactacactactagagataccataccaaatatgcttaagtagagaaaaatccagagagaaaaacccttaatcatatacacaatagtccac |
51191049 |
T |
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| Q |
201 |
aataacatgtttaatactaatagcaaccattttctaatagtaattatggttctttcactagtcttaaacactcaagggcaagaaaatagagaaacacaga |
300 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51191048 |
aataacatgtttaatactaatagcaaccattttctgatagtaattatggttctttcactagtcttaaacactcaagggcaagaaaatagagaaacacaga |
51190949 |
T |
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| Q |
301 |
acatggcagagttacca |
317 |
Q |
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||||||||||||||||| |
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| T |
51190948 |
acatggcagagttacca |
51190932 |
T |
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