View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19757_high_87 (Length: 283)
Name: NF19757_high_87
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_high_87 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 10881590 - 10881350
Alignment:
| Q |
19 |
attatagagatatccttgttggtacattctcctctaaatgtgacccttccaagcaaaaatttcccatgcggcacgtaaatggttgaaggctttgttgagg |
118 |
Q |
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| T |
10881590 |
attatagagatatccttgttggtacattctcctctaaatgtgacccttccaagcaaaaatttcccatgtggcacgtaaatggttgaaggc---------- |
10881501 |
T |
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| Q |
119 |
tacaagctttgttccatgcaacaaggaaggattttgtggaatcggtttgaccatttggtttggctccaaaatcaaccacattgtaggtagttgatttggc |
218 |
Q |
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| T |
10881500 |
-acaagctttgttccatgcaacaaggaaggattttgtggaatcggtttgaccatttggtttggctccaaaatcaaccacattgtaggtagttgatttggc |
10881402 |
T |
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| Q |
219 |
caaggttgaattgaataataatgagtataataataaaatgtacaatgtttta |
270 |
Q |
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| T |
10881401 |
caaggttgaattgaataataatgagtataataataaaatgtaaaatgtttta |
10881350 |
T |
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