View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19757_low_1 (Length: 1030)

Name: NF19757_low_1
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19757_low_1
NF19757_low_1
[»] chr4 (86 HSPs)
chr4 (9-1014)||(14983874-14984865)
chr4 (919-1014)||(30690176-30690271)
chr4 (918-1014)||(20639657-20639754)
chr4 (918-1014)||(25629089-25629185)
chr4 (918-1013)||(5648299-5648394)
chr4 (918-1014)||(23501827-23501925)
chr4 (920-1013)||(6430627-6430720)
chr4 (919-1012)||(20225024-20225117)
chr4 (935-1013)||(7909296-7909375)
chr4 (921-1012)||(29207900-29207991)
chr4 (918-1013)||(30639420-30639515)
chr4 (916-1007)||(16911609-16911702)
chr4 (918-1007)||(5306659-5306752)
chr4 (765-825)||(7246316-7246376)
chr4 (918-982)||(30352579-30352643)
chr4 (918-1014)||(47443997-47444093)
chr4 (938-1014)||(51865057-51865133)
chr4 (935-1014)||(37494891-37494970)
chr4 (919-982)||(44363130-44363193)
chr4 (918-1012)||(9832312-9832406)
chr4 (935-1014)||(20405127-20405208)
chr4 (918-976)||(36816383-36816441)
chr4 (919-981)||(38755908-38755970)
chr4 (935-1005)||(40915877-40915947)
chr4 (918-1012)||(47528529-47528623)
chr4 (918-1012)||(48598824-48598918)
chr4 (935-1014)||(54730290-54730371)
chr4 (918-1014)||(20908635-20908732)
chr4 (940-1005)||(49796846-49796911)
chr4 (942-1014)||(7385499-7385571)
chr4 (918-1014)||(35567210-35567306)
chr4 (918-990)||(38786673-38786745)
chr4 (919-982)||(11394924-11394987)
chr4 (919-982)||(11404651-11404714)
chr4 (919-1007)||(20225121-20225211)
chr4 (939-1002)||(25463174-25463237)
chr4 (918-981)||(33836486-33836549)
chr4 (918-969)||(35532077-35532128)
chr4 (914-969)||(40553932-40553987)
chr4 (918-1012)||(11054147-11054241)
chr4 (918-976)||(32484311-32484369)
chr4 (779-825)||(41083113-41083159)
chr4 (920-1007)||(8473621-8473710)
chr4 (918-1013)||(54175104-54175201)
chr4 (938-1010)||(9987853-9987925)
chr4 (765-825)||(25056188-25056248)
chr4 (765-825)||(41083346-41083406)
chr4 (935-1007)||(55766482-55766554)
chr4 (919-1007)||(55830721-55830809)
chr4 (918-1014)||(16408600-16408698)
chr4 (935-1014)||(19027888-19027967)
chr4 (922-1014)||(21647004-21647098)
chr4 (935-1006)||(30496338-30496409)
chr4 (939-990)||(32478811-32478862)
chr4 (778-825)||(41083052-41083099)
chr4 (939-982)||(47482870-47482913)
chr4 (939-1014)||(54967061-54967135)
chr4 (779-825)||(7246051-7246097)
chr4 (919-981)||(25388249-25388311)
chr4 (918-1012)||(39077795-39077889)
chr4 (779-825)||(45038408-45038454)
chr4 (780-825)||(26782353-26782398)
chr4 (765-825)||(17231973-17232033)
chr4 (765-825)||(26782525-26782585)
chr4 (935-1014)||(30581481-30581561)
chr4 (765-825)||(45038174-45038234)
chr4 (765-825)||(45787008-45787068)
chr4 (781-825)||(55617583-55617627)
chr4 (781-825)||(55624887-55624931)
chr4 (918-1014)||(13256398-13256496)
chr4 (939-982)||(21489160-21489203)
chr4 (778-825)||(24684337-24684384)
chr4 (783-826)||(41083285-41083328)
chr4 (778-825)||(41519445-41519492)
chr4 (937-976)||(44718645-44718684)
chr4 (765-812)||(51950784-51950831)
chr4 (779-825)||(2470140-2470186)
chr4 (783-825)||(9999522-9999564)
chr4 (920-1014)||(12711450-12711544)
chr4 (918-976)||(19027989-19028047)
chr4 (779-825)||(21322062-21322108)
chr4 (930-968)||(37038134-37038172)
chr4 (937-1014)||(39029078-39029156)
chr4 (779-825)||(40395158-40395204)
chr4 (779-825)||(46196169-46196215)
chr4 (780-825)||(45038468-45038513)
[»] scaffold0057 (4 HSPs)
scaffold0057 (918-1014)||(46871-46967)
scaffold0057 (918-1014)||(24771-24867)
scaffold0057 (916-1005)||(43706-43796)
scaffold0057 (938-1007)||(46726-46796)
[»] chr8 (55 HSPs)
chr8 (918-1014)||(35261719-35261815)
chr8 (915-1014)||(36720836-36720935)
chr8 (916-1014)||(44530189-44530287)
chr8 (917-1014)||(12625930-12626027)
chr8 (921-1014)||(29877134-29877227)
chr8 (918-1014)||(8897763-8897859)
chr8 (918-1014)||(28817625-28817721)
chr8 (935-1013)||(13160742-13160820)
chr8 (920-1013)||(45071305-45071398)
chr8 (935-1014)||(389685-389764)
chr8 (919-1014)||(2626562-2626657)
chr8 (918-1013)||(18164759-18164854)
chr8 (918-1012)||(12670249-12670343)
chr8 (916-1014)||(39460991-39461091)
chr8 (939-1014)||(5135309-5135384)
chr8 (764-823)||(24827341-24827400)
chr8 (918-993)||(26102578-26102653)
chr8 (935-1014)||(29521701-29521780)
chr8 (918-1005)||(30454096-30454183)
chr8 (935-1014)||(20284085-20284166)
chr8 (935-1014)||(21070713-21070794)
chr8 (918-1014)||(10857869-10857965)
chr8 (939-1007)||(24365079-24365147)
chr8 (765-825)||(41151390-41151450)
chr8 (918-1014)||(20869963-20870061)
chr8 (914-1012)||(19729382-19729480)
chr8 (918-968)||(27468091-27468141)
chr8 (937-1014)||(8483956-8484033)
chr8 (917-1014)||(40604904-40605000)
chr8 (935-1007)||(5689678-5689750)
chr8 (918-1007)||(7136526-7136617)
chr8 (918-1014)||(6760862-6760960)
chr8 (918-1014)||(25250562-25250660)
chr8 (919-982)||(28407475-28407538)
chr8 (935-976)||(27507988-27508029)
chr8 (916-1013)||(31457213-31457310)
chr8 (918-983)||(35107310-35107375)
chr8 (765-825)||(6220168-6220228)
chr8 (778-822)||(9399814-9399858)
chr8 (765-825)||(9400119-9400179)
chr8 (917-1014)||(26954173-26954272)
chr8 (777-825)||(27052405-27052453)
chr8 (918-998)||(16013510-16013592)
chr8 (919-990)||(17823640-17823711)
chr8 (935-982)||(18595910-18595957)
chr8 (778-825)||(24909696-24909743)
chr8 (766-821)||(42667432-42667487)
chr8 (935-982)||(44781520-44781567)
chr8 (779-825)||(6220475-6220521)
chr8 (935-1014)||(16225059-16225140)
chr8 (938-976)||(24245527-24245565)
chr8 (779-825)||(24827416-24827462)
chr8 (779-825)||(27052626-27052672)
chr8 (776-825)||(27127874-27127922)
chr8 (772-825)||(27128168-27128220)
[»] chr5 (53 HSPs)
chr5 (918-1014)||(24448930-24449026)
chr5 (919-1013)||(7097760-7097854)
chr5 (917-993)||(16957375-16957451)
chr5 (917-1014)||(38879621-38879720)
chr5 (917-1012)||(32703464-32703559)
chr5 (917-1013)||(41014359-41014455)
chr5 (937-1012)||(43574648-43574723)
chr5 (918-1012)||(8169983-8170077)
chr5 (920-1014)||(12006329-12006425)
chr5 (919-1007)||(34154814-34154902)
chr5 (935-1014)||(16880663-16880742)
chr5 (918-1014)||(43334243-43334340)
chr5 (915-1014)||(4619100-4619201)
chr5 (935-1013)||(19142959-19143037)
chr5 (918-1012)||(35710353-35710447)
chr5 (761-825)||(28559216-28559280)
chr5 (930-1014)||(31694119-31694203)
chr5 (942-1013)||(2838819-2838890)
chr5 (938-1014)||(27328792-27328870)
chr5 (935-1013)||(5873338-5873416)
chr5 (922-1012)||(7368438-7368528)
chr5 (919-1014)||(13801767-13801864)
chr5 (935-981)||(25622533-25622579)
chr5 (938-982)||(10306493-10306537)
chr5 (765-821)||(10827402-10827458)
chr5 (765-825)||(17400839-17400899)
chr5 (939-1007)||(22600501-22600569)
chr5 (917-969)||(32354212-32354264)
chr5 (765-825)||(35461421-35461481)
chr5 (936-1014)||(1405227-1405305)
chr5 (918-976)||(16028623-16028681)
chr5 (779-825)||(16327157-16327203)
chr5 (779-825)||(25456334-25456380)
chr5 (917-1014)||(3771379-3771476)
chr5 (918-1014)||(28516432-28516529)
chr5 (914-1007)||(30006372-30006464)
chr5 (765-825)||(16327083-16327143)
chr5 (779-823)||(19550312-19550356)
chr5 (922-982)||(21784335-21784395)
chr5 (765-825)||(35461728-35461788)
chr5 (778-825)||(19550359-19550406)
chr5 (917-976)||(39801594-39801653)
chr5 (779-825)||(12713119-12713165)
chr5 (779-825)||(12774383-12774429)
chr5 (935-969)||(13774950-13774984)
chr5 (779-825)||(16327331-16327377)
chr5 (775-817)||(28559536-28559578)
chr5 (917-1014)||(29334435-29334533)
chr5 (939-999)||(12575680-12575741)
chr5 (920-1014)||(20135644-20135740)
chr5 (941-982)||(21542489-21542530)
chr5 (919-976)||(30877564-30877621)
chr5 (935-1014)||(42924846-42924929)
[»] chr3 (70 HSPs)
chr3 (918-1014)||(40272811-40272907)
chr3 (918-1014)||(54484753-54484849)
chr3 (919-1012)||(31592911-31593004)
chr3 (919-1012)||(39203578-39203671)
chr3 (938-1014)||(8247706-8247784)
chr3 (935-1014)||(45948854-45948933)
chr3 (935-1013)||(6411838-6411916)
chr3 (916-1007)||(13628787-13628880)
chr3 (918-1004)||(52926218-52926304)
chr3 (920-1013)||(22609828-22609921)
chr3 (918-1013)||(26869769-26869864)
chr3 (918-1012)||(1217152-1217246)
chr3 (918-1012)||(15797284-15797378)
chr3 (918-1012)||(34771363-34771457)
chr3 (916-1013)||(16735503-16735600)
chr3 (921-1014)||(26573189-26573282)
chr3 (920-1012)||(22122918-22123010)
chr3 (917-993)||(25517168-25517244)
chr3 (917-1014)||(29366718-29366817)
chr3 (919-1007)||(10795423-10795513)
chr3 (938-1014)||(46421054-46421132)
chr3 (936-1014)||(54374362-54374441)
chr3 (919-1014)||(45786214-45786311)
chr3 (921-1014)||(353351-353446)
chr3 (918-1014)||(13730601-13730699)
chr3 (918-1014)||(49013472-49013570)
chr3 (932-982)||(10300585-10300635)
chr3 (916-974)||(10484613-10484671)
chr3 (918-975)||(516513-516570)
chr3 (918-1004)||(5173718-5173806)
chr3 (917-1014)||(12914033-12914130)
chr3 (918-967)||(47624208-47624257)
chr3 (918-1014)||(53996564-53996661)
chr3 (938-1014)||(9276326-9276401)
chr3 (918-982)||(24851300-24851364)
chr3 (916-976)||(30452895-30452955)
chr3 (935-1014)||(34420659-34420739)
chr3 (765-825)||(39541461-39541521)
chr3 (765-825)||(47573680-47573740)
chr3 (918-993)||(24578008-24578083)
chr3 (766-825)||(26976528-26976587)
chr3 (766-825)||(28814090-28814149)
chr3 (778-825)||(47069526-47069573)
chr3 (950-1013)||(47624104-47624167)
chr3 (935-1004)||(829458-829528)
chr3 (935-1014)||(14987019-14987100)
chr3 (779-825)||(32186705-32186751)
chr3 (779-825)||(40286479-40286525)
chr3 (779-825)||(50332725-50332771)
chr3 (780-825)||(13903036-13903081)
chr3 (935-995)||(43114884-43114944)
chr3 (917-962)||(54032569-54032614)
chr3 (918-962)||(4495675-4495719)
chr3 (918-982)||(25944564-25944628)
chr3 (765-825)||(32186448-32186507)
chr3 (777-825)||(45131436-45131484)
chr3 (765-825)||(47891412-47891472)
chr3 (766-821)||(3377014-3377069)
chr3 (935-1014)||(7943052-7943131)
chr3 (935-1013)||(33926145-33926224)
chr3 (783-825)||(7607718-7607759)
chr3 (779-825)||(14964889-14964934)
chr3 (775-825)||(26976371-26976421)
chr3 (920-1014)||(33235594-33235687)
chr3 (779-825)||(40286297-40286343)
chr3 (918-960)||(40390357-40390399)
chr3 (778-820)||(47069766-47069808)
chr3 (779-825)||(47891352-47891398)
chr3 (918-1012)||(50624952-50625046)
chr3 (936-1014)||(9607265-9607345)
[»] chr2 (65 HSPs)
chr2 (918-1014)||(10546203-10546299)
chr2 (917-1012)||(9671221-9671316)
chr2 (915-1012)||(21779257-21779354)
chr2 (916-1007)||(8455313-8455404)
chr2 (918-1013)||(14444769-14444864)
chr2 (919-1014)||(10543738-10543835)
chr2 (918-1012)||(36871534-36871627)
chr2 (918-1014)||(17896300-17896396)
chr2 (919-1014)||(14530358-14530455)
chr2 (918-1007)||(25249737-25249826)
chr2 (917-1014)||(5841068-5841167)
chr2 (916-1004)||(11514486-11514573)
chr2 (930-1014)||(19977725-19977809)
chr2 (938-1014)||(26684639-26684715)
chr2 (938-1014)||(31821362-31821438)
chr2 (765-825)||(33847725-33847785)
chr2 (766-821)||(5009468-5009523)
chr2 (935-1014)||(24890451-24890530)
chr2 (919-1014)||(25079717-25079812)
chr2 (919-1014)||(25632549-25632644)
chr2 (930-1013)||(30826077-30826159)
chr2 (920-1005)||(13245096-13245181)
chr2 (919-1012)||(23397806-23397899)
chr2 (914-982)||(23488555-23488623)
chr2 (931-1014)||(4516363-4516446)
chr2 (919-974)||(8575975-8576030)
chr2 (919-974)||(14544146-14544201)
chr2 (916-967)||(22371199-22371250)
chr2 (939-1014)||(32781308-32781383)
chr2 (919-1006)||(40762234-40762321)
chr2 (918-1007)||(17668049-17668138)
chr2 (935-1012)||(25641543-25641620)
chr2 (936-1014)||(31158456-31158536)
chr2 (935-976)||(34766333-34766374)
chr2 (917-1014)||(39914304-39914400)
chr2 (917-1014)||(44643563-44643660)
chr2 (939-1007)||(17380257-17380325)
chr2 (916-976)||(34080179-34080239)
chr2 (920-976)||(40579750-40579806)
chr2 (922-990)||(45235820-45235888)
chr2 (950-1013)||(12023950-12024013)
chr2 (939-1014)||(21377093-21377168)
chr2 (950-1013)||(22371095-22371158)
chr2 (918-1014)||(24200622-24200720)
chr2 (932-1002)||(99278-99348)
chr2 (932-990)||(24059009-24059067)
chr2 (935-993)||(24860004-24860062)
chr2 (779-825)||(25895208-25895254)
chr2 (931-989)||(31525771-31525829)
chr2 (918-1007)||(17623611-17623700)
chr2 (764-821)||(44556509-44556566)
chr2 (935-967)||(124930-124962)
chr2 (765-825)||(4189045-4189105)
chr2 (765-825)||(9500890-9500950)
chr2 (765-825)||(14166479-14166539)
chr2 (935-982)||(4794874-4794921)
chr2 (782-825)||(5009405-5009448)
chr2 (778-825)||(25894963-25895010)
chr2 (930-1013)||(39499241-39499324)
chr2 (921-976)||(41409940-41409995)
chr2 (778-825)||(43699471-43699518)
chr2 (919-969)||(3633708-3633758)
chr2 (936-982)||(19185760-19185806)
chr2 (929-974)||(19615073-19615118)
chr2 (780-825)||(29379925-29379970)
[»] chr1 (66 HSPs)
chr1 (918-1014)||(46247952-46248048)
chr1 (919-1014)||(4349701-4349796)
chr1 (916-1012)||(34725095-34725191)
chr1 (935-1014)||(23768336-23768415)
chr1 (915-1014)||(10668288-10668389)
chr1 (916-993)||(27474364-27474441)
chr1 (918-1014)||(6925163-6925259)
chr1 (917-1005)||(14617110-14617198)
chr1 (917-1014)||(35005186-35005285)
chr1 (914-1014)||(30395721-30395823)
chr1 (918-1013)||(31382213-31382308)
chr1 (915-1013)||(32632553-32632651)
chr1 (918-1012)||(35253186-35253280)
chr1 (918-1013)||(42304206-42304303)
chr1 (930-1012)||(47214574-47214656)
chr1 (918-1014)||(18944706-18944805)
chr1 (922-1014)||(46991867-46991959)
chr1 (917-1012)||(19414502-19414597)
chr1 (922-993)||(45402180-45402251)
chr1 (939-1013)||(11596576-11596650)
chr1 (918-1012)||(12126836-12126930)
chr1 (918-1012)||(38478281-38478375)
chr1 (935-1012)||(10378751-10378828)
chr1 (917-1014)||(41319804-41319901)
chr1 (938-1007)||(43768209-43768278)
chr1 (939-1007)||(15505634-15505702)
chr1 (765-825)||(26879693-26879753)
chr1 (918-982)||(50606498-50606562)
chr1 (915-1014)||(6983807-6983906)
chr1 (918-1014)||(18741956-18742054)
chr1 (935-1013)||(19974090-19974169)
chr1 (942-1013)||(21910673-21910743)
chr1 (935-1007)||(27201717-27201791)
chr1 (915-1014)||(20004086-20004187)
chr1 (918-1004)||(23796538-23796624)
chr1 (941-1007)||(25468285-25468351)
chr1 (779-825)||(34173317-34173363)
chr1 (918-1012)||(45812536-45812630)
chr1 (918-1003)||(1517310-1517395)
chr1 (916-1014)||(19932750-19932850)
chr1 (917-1002)||(20999848-20999933)
chr1 (918-1014)||(8197106-8197202)
chr1 (930-982)||(19701666-19701718)
chr1 (942-1014)||(20982773-20982845)
chr1 (765-825)||(33650383-33650443)
chr1 (939-1014)||(18724565-18724640)
chr1 (916-971)||(19386573-19386628)
chr1 (934-976)||(20169104-20169146)
chr1 (939-1005)||(44485129-44485195)
chr1 (935-976)||(33594147-33594188)
chr1 (765-822)||(33650696-33650753)
chr1 (938-1014)||(50812003-50812079)
chr1 (917-969)||(9939572-9939624)
chr1 (943-1007)||(20036291-20036355)
chr1 (935-983)||(30555209-30555257)
chr1 (939-1014)||(31442409-31442485)
chr1 (935-982)||(35117781-35117829)
chr1 (765-825)||(40892591-40892651)
chr1 (935-1013)||(2435802-2435881)
chr1 (935-982)||(4587579-4587626)
chr1 (939-982)||(30682907-30682950)
chr1 (766-825)||(52913017-52913076)
chr1 (779-825)||(2633555-2633601)
chr1 (936-1014)||(18335305-18335383)
chr1 (942-1012)||(34148983-34149053)
chr1 (935-964)||(31272397-31272426)
[»] scaffold1176 (1 HSPs)
scaffold1176 (914-1012)||(1583-1680)
[»] chr7 (61 HSPs)
chr7 (918-1014)||(7879678-7879774)
chr7 (918-1014)||(38262195-38262291)
chr7 (914-1013)||(18512448-18512547)
chr7 (917-1012)||(21172007-21172102)
chr7 (918-1012)||(42391099-42391193)
chr7 (935-1014)||(2541035-2541114)
chr7 (914-1004)||(31591104-31591194)
chr7 (918-1012)||(32758301-32758395)
chr7 (919-1005)||(48735122-48735208)
chr7 (935-1012)||(10693089-10693166)
chr7 (936-1013)||(34626225-34626302)
chr7 (917-1006)||(40463924-40464013)
chr7 (918-1014)||(27629674-27629770)
chr7 (918-1002)||(27889315-27889399)
chr7 (917-1005)||(35787267-35787355)
chr7 (938-1013)||(38604567-38604642)
chr7 (920-1014)||(11617589-11617683)
chr7 (940-1014)||(19266490-19266564)
chr7 (923-1013)||(33871914-33872004)
chr7 (919-969)||(45018923-45018973)
chr7 (918-1014)||(19426889-19426984)
chr7 (765-825)||(42312744-42312804)
chr7 (918-1014)||(42798709-42798805)
chr7 (778-825)||(6694762-6694809)
chr7 (935-1014)||(8148962-8149040)
chr7 (935-1014)||(23231597-23231676)
chr7 (935-1014)||(35334832-35334911)
chr7 (918-1014)||(42805564-42805662)
chr7 (779-825)||(29710379-29710425)
chr7 (919-1014)||(47716499-47716596)
chr7 (917-982)||(39123967-39124032)
chr7 (765-825)||(6694516-6694576)
chr7 (920-1012)||(11741835-11741927)
chr7 (935-1007)||(18747534-18747606)
chr7 (765-825)||(27280599-27280659)
chr7 (938-1014)||(28078151-28078227)
chr7 (782-825)||(3198273-3198316)
chr7 (939-1006)||(13805149-13805216)
chr7 (918-1013)||(19265855-19265949)
chr7 (922-969)||(42495865-42495912)
chr7 (779-825)||(6222079-6222125)
chr7 (779-825)||(27576623-27576669)
chr7 (779-825)||(29710612-29710658)
chr7 (779-824)||(11975506-11975551)
chr7 (195-264)||(24553445-24553514)
chr7 (920-1005)||(42476920-42477005)
chr7 (935-1012)||(47077871-47077948)
chr7 (765-825)||(29710305-29710365)
chr7 (920-1014)||(29907459-29907552)
chr7 (765-825)||(31453074-31453134)
chr7 (918-966)||(36602535-36602583)
chr7 (918-1014)||(43557512-43557611)
chr7 (941-1012)||(2662958-2663028)
chr7 (782-825)||(30869632-30869675)
chr7 (935-982)||(33500587-33500634)
chr7 (948-1014)||(1408497-1408563)
chr7 (935-1014)||(3469191-3469272)
chr7 (779-825)||(11975673-11975719)
chr7 (776-826)||(41666375-41666425)
chr7 (782-823)||(4048264-4048305)
chr7 (780-825)||(6069293-6069338)
[»] scaffold0018 (3 HSPs)
scaffold0018 (919-1014)||(72867-72962)
scaffold0018 (778-825)||(161402-161449)
scaffold0018 (779-825)||(161697-161743)
[»] scaffold0015 (1 HSPs)
scaffold0015 (917-1012)||(48632-48727)
[»] chr6 (42 HSPs)
chr6 (917-1012)||(1354755-1354850)
chr6 (918-1012)||(1347004-1347098)
chr6 (918-1012)||(26097200-26097294)
chr6 (918-1007)||(29355854-29355945)
chr6 (918-1012)||(25557765-25557859)
chr6 (918-1014)||(12221913-12222012)
chr6 (765-825)||(21598738-21598798)
chr6 (918-982)||(24097649-24097713)
chr6 (916-999)||(23930124-23930207)
chr6 (918-991)||(13267788-13267861)
chr6 (765-825)||(10356554-10356614)
chr6 (765-825)||(13273053-13273113)
chr6 (918-981)||(6808468-6808531)
chr6 (918-981)||(9161197-9161260)
chr6 (917-982)||(12885985-12886050)
chr6 (936-1013)||(32579466-32579543)
chr6 (935-1014)||(19340868-19340947)
chr6 (918-981)||(12892082-12892145)
chr6 (778-825)||(35225396-35225443)
chr6 (779-825)||(10356494-10356540)
chr6 (779-825)||(21598504-21598550)
chr6 (779-825)||(21598678-21598724)
chr6 (935-1007)||(7947387-7947460)
chr6 (936-969)||(10734922-10734955)
chr6 (918-967)||(32728156-32728205)
chr6 (918-1014)||(1941895-1941991)
chr6 (918-1003)||(2166409-2166496)
chr6 (918-1003)||(2178042-2178129)
chr6 (765-825)||(9982655-9982715)
chr6 (936-976)||(11395839-11395879)
chr6 (765-825)||(17136829-17136889)
chr6 (935-990)||(15866055-15866110)
chr6 (783-826)||(17342672-17342715)
chr6 (782-825)||(17342733-17342776)
chr6 (778-825)||(21598443-21598490)
chr6 (919-993)||(383760-383834)
chr6 (936-982)||(3116146-3116192)
chr6 (779-825)||(10356320-10356366)
chr6 (779-825)||(35050813-35050859)
chr6 (765-822)||(3848533-3848590)
chr6 (935-1012)||(23240840-23240917)
chr6 (781-826)||(35050757-35050802)
[»] scaffold0223 (1 HSPs)
scaffold0223 (919-1004)||(11179-11264)
[»] scaffold0311 (1 HSPs)
scaffold0311 (935-1014)||(10850-10929)
[»] scaffold0168 (1 HSPs)
scaffold0168 (918-1012)||(30619-30713)
[»] scaffold0180 (1 HSPs)
scaffold0180 (918-1006)||(24132-24220)
[»] scaffold0258 (1 HSPs)
scaffold0258 (918-1005)||(13023-13110)
[»] scaffold0954 (1 HSPs)
scaffold0954 (935-1014)||(3584-3663)
[»] scaffold0279 (1 HSPs)
scaffold0279 (779-825)||(1227-1273)
[»] scaffold0049 (1 HSPs)
scaffold0049 (935-1014)||(59017-59098)


Alignment Details
Target: chr4 (Bit Score: 840; Significance: 0; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 840; E-Value: 0
Query Start/End: Original strand, 9 - 1014
Target Start/End: Complemental strand, 14984865 - 14983874
Alignment:
Q  9 acatcatcacagttcagccactctaggatccagcagtttagatcaacattcacagagggttgtatgcctaaaggtgaggcaaataaggacaaacgtgcta 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  14984865 acatcattacagttcagccactctaggatccagcagtttagatcaacattcacagggggttgtatgcctaaaggtgaggcaaataaggacaaacatgcta 14984766  T
Q  109 gattacaattcatatacagatggctcacattttctatggatgagtggcagagagggcatacagtgtctaaatgaataccnnnnnnn-ggagatttgctct 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||    
T  14984765 gattacaattcatatacagatggctcacattttctatggatgagtggcagagagggcatacagtgtctaaatgaataccttttttttggagatttgctct 14984666  T
Q  208 agtgggcagaatgtttttagcaagtctccacataaaagttttgatcttgtttgggataggagccttccaaacatcattccataatttaccatctctgtcg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  14984665 agtgggcagaatgtttttagcaagtctccacataaaagttttgatcttgtttgggataggagccttccaaatatcattccataatttaccatccctgtcg 14984566  T
Q  308 gttgatggacctggacagaggnnnnnnnngttggtgcacaagagatggtatgctgaacgtactgatatgggaatgctgacaatctttaaagcttctgcac 407  Q
    |||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984565 gttgatggacctggacggaggttttctttgttggtgcacaagagatggtatgctgaacgtactgatatgggaatgctgacaatctttaaagcttctgcac 14984466  T
Q  408 tgtcaaaatcgtttttccatgttcttactgtacttttttaataccttttatttatttgtcatccggttcaactat---tgaaccccaattttaccatgac 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  14984465 tgtcaaaatcgtttttccatgttcttactgtacttttttaataccttttatttatttgtcatccggttcaactatagttgaaccccaattttaccatgac 14984366  T
Q  505 cggaagtctcgcaggtttgatattctgtctggttttcaaaacctgtctggttttcaaaacattgcaaaatataaaggattgattgcagagattcaaattg 604  Q
    |||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984365 cggaagtctcgcaggtttgatattctgtctggt------------------tttcaaaacattgcaaaatataaaggattgattgcagagattcaaattg 14984284  T
Q  605 ctgttcacagctgagtcatttctcttttacctagacattggacttttatacgtggtttaagggaaagtggtccttttgaatttctgataatttaggtctc 704  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14984283 ctgttcacagctgagtcatttctcttttacctagacattggacttttatacgtggtttgagggaaagtggtccttttgaatttctgataatttaggtctc 14984184  T
Q  705 tggatcaaaacacaactcgatggtgcacctggagtctctatagcaaataatattttgggaaaattacatcagaggtcctttaagtttgatgtttgtaaca 804  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984183 tggatcaaaacacaactcgatggtgcacctggagtctctatagcaaataatattttgggaaaattacatcagaggtcctttaagtttgatgtttgtaaca 14984084  T
Q  805 tattggtcttttaagttatttcacaaacttaaaggacttaaagaacccctggtgtaatttaacctaatattttgtagttatgtagtaaacttctgtaaag 904  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984083 tattggtcctttaagttatttcacaaacttaaaggacttaaagaacccctggtgtaatttaacctaatattttgtagttatgtagtaaacttctgtaaag 14983984  T
Q  905 catgatttgaaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 1004  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  14983983 catgatttggaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttac 14983884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 919 - 1014
Target Start/End: Original strand, 30690176 - 30690271
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||| || || |||||||||| ||| ||||||||| ||||||    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttt 30690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 20639657 - 20639754
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||| ||| ||||||||| ||||||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttt 20639754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 25629185 - 25629089
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| | |||||||||||||| |||||| ||||| ||||||||||  || ||||||||||||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctatttttt 25629089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 918 - 1013
Target Start/End: Complemental strand, 5648394 - 5648299
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||   || |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 5648299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 23501925 - 23501827
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||| |||||| |||  || |||||||||| ||||||||||||| ||||||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtttttt 23501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 920 - 1013
Target Start/End: Original strand, 6430627 - 6430720
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||  ||| | ||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgttttt 6430720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 919 - 1012
Target Start/End: Complemental strand, 20225117 - 20225024
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 20225024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 935 - 1013
Target Start/End: Original strand, 7909296 - 7909375
Alignment:
Q  935 cactaaagctccc-gcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||| ||||||||||||| |||||||| |||||| ||||| |||||||||| ||||||||||||| |||||    
T  7909296 cactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttt 7909375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 921 - 1012
Target Start/End: Original strand, 29207900 - 29207991
Alignment:
Q  921 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 29207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 918 - 1013
Target Start/End: Complemental strand, 30639515 - 30639420
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||   || |||||||||||||||||| |||||||||||||||| ||| || ||||| |||||||||| ||| ||||||||| |||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttt 30639420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 916 - 1007
Target Start/End: Complemental strand, 16911702 - 16911609
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||  |||| |||||||||||||| ||||||||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  16911702 ataaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 16911609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1007
Target Start/End: Original strand, 5306659 - 5306752
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccg----catacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||  ||| || |||||||||||    ||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||||    
T  5306659 aaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct 5306752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 7246376 - 7246316
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  7246376 aaattacatttgagatcctttaagtttgaggtttgtaacatattggtcttttaagttattt 7246316  T

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Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 982
Target Start/End: Original strand, 30352579 - 30352643
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccattt 30352643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 47444093 - 47443997
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||   || |||| ||||||| ||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 47443997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 1014
Target Start/End: Original strand, 51865057 - 51865133
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||||||||||||| | |||| ||||| |||||||||| ||| ||||||| | ||||||    
T  51865057 taaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgtttttt 51865133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 37494970 - 37494891
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||| ||||||||||||||| | |||| |||||| ||||| || ||||||| ||||||||||||| ||||||    
T  37494970 cactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgtttttt 37494891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 919 - 982
Target Start/End: Original strand, 44363130 - 44363193
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 44363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 9832312 - 9832406
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| || ||| ||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 9832406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 20405208 - 20405127
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||| || ||||||||||||| |||||| |||  ||||||||||||| |||| |||||||| ||||||    
T  20405208 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttt 20405127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 976
Target Start/End: Original strand, 36816383 - 36816441
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtccca 36816441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 981
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 935 - 1005
Target Start/End: Complemental strand, 40915947 - 40915877
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||| ||||||||||||||||||||||||||||||  ||||| ||||| |||||||||| ||| |||||||    
T  40915947 cactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttacc 40915877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 47528529 - 47528623
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| ||||||| ||||  ||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 47528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 48598824 - 48598918
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||| ||||| ||| |||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 48598918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 54730371 - 54730290
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  || ||||||| || ||| ||||| ||||||||||    
T  54730371 cactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttt 54730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 20908635 - 20908732
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||| | | || |||||||||||||||||||||||||| |||||||| |||||| || ||| |||||||||| ||| ||||||| | ||||||    
T  20908635 aaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttt 20908732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 940 - 1005
Target Start/End: Complemental strand, 49796911 - 49796846
Alignment:
Q  940 aagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    ||||||||||||||||||||| |||||||| |||||| ||||| |||||||||| ||| |||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttacc 49796846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 942 - 1014
Target Start/End: Original strand, 7385499 - 7385571
Alignment:
Q  942 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||| ||||||||||||| | |||||| ||||| |||||||| |  |||||||||||||||||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctatttttt 7385571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 35567306 - 35567210
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||| |  ||| |||||||||||||||| ||||||||| |||||||| |||||| ||||| |||| |||||  || ||||||||| ||||||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgtttttt 35567210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 918 - 990
Target Start/End: Complemental strand, 38786745 - 38786673
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 990  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 919 - 982
Target Start/End: Complemental strand, 11394987 - 11394924
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 919 - 982
Target Start/End: Complemental strand, 11404714 - 11404651
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 919 - 1007
Target Start/End: Complemental strand, 20225211 - 20225121
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20225121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 939 - 1002
Target Start/End: Complemental strand, 25463237 - 25463174
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 1002  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| |||| ||||| ||||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctt 25463174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 981
Target Start/End: Original strand, 33836486 - 33836549
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 969
Target Start/End: Complemental strand, 35532128 - 35532077
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  35532128 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 914 - 969
Target Start/End: Original strand, 40553932 - 40553987
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    |||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  40553932 aaattaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 40553987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 11054147 - 11054241
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| || ||  ||||| |||||||||| |||  |||||||| ||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgtttt 11054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 918 - 976
Target Start/End: Complemental strand, 32484369 - 32484311
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||| ||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtccca 32484311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 41083113 - 41083159
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  41083113 gtcctttaagtttgaagtttgtaacatattggtcctttaagttattt 41083159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 920 - 1007
Target Start/End: Original strand, 8473621 - 8473710
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgca-gggtcc-gggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||  ||| |||||||||||||||||| ||| |||||| ||||||| |||||| ||||| |||||||||| ||| |||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccct 8473710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 1013
Target Start/End: Complemental strand, 54175201 - 54175104
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtcc-gggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||| |  ||| |||||||||||||||||| ||||||||| ||||||| |||||| || ||| |||||||||| ||| ||||||||| |||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttt 54175104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 938 - 1010
Target Start/End: Original strand, 9987853 - 9987925
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatt 1010  Q
    ||||||||||||||| ||| ||||  |||||| |||||| ||||| |||||||||| ||| ||||||||||||    
T  9987853 taaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctatt 9987925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 25056248 - 25056188
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| |||  ||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  25056248 aaattacaccaggagtcttttaagtttgaggtttgtaacaaattggtcttttaagttattt 25056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 41083406 - 41083346
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||  || |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  41083406 aaattacaataggggtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 41083346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 935 - 1007
Target Start/End: Original strand, 55766482 - 55766554
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||| |||||||||| ||||||||| || || ||| |||| ||||||||||| ||| |||||||||    
T  55766482 cactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccct 55766554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 919 - 1007
Target Start/End: Original strand, 55830721 - 55830809
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||| | |||| ||||||||||| |||||||||| ||||||||| || || ||| |||| ||||||||||| ||| | |||||||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccct 55830809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 16408600 - 16408698
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| || ||| |||  || |||||||||| |||  |||||||| ||||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtttttt 16408698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 19027967 - 19027888
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||| ||||||||| ||| || |||| |||||| || || |||||||||| ||| ||||||||| ||||||    
T  19027967 cactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgtttttt 19027888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 1014
Target Start/End: Complemental strand, 21647098 - 21647004
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||  ||| |||||||||||||||||| || ||||| ||||||| |||||| |||  || || ||||||| ||| ||||||||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctatttttt 21647004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 935 - 1006
Target Start/End: Original strand, 30496338 - 30496409
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 1006  Q
    ||||||||||||  |||| ||| ||||||||||||||||||  ||||| |||||||||| ||| ||||||||    
T  30496338 cactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttaccc 30496409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 939 - 990
Target Start/End: Original strand, 32478811 - 32478862
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 990  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||| |||||||    
T  32478811 aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt 32478862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 41083052 - 41083099
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||    
T  41083052 ggtcctttaagtttgaggtttgtaacatattgatcatttaagttattt 41083099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 939 - 982
Target Start/End: Original strand, 47482870 - 47482913
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  47482870 aaagctcccgcatacgcagggtccgggaaggggtcccaccattt 47482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 939 - 1014
Target Start/End: Complemental strand, 54967135 - 54967061
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||| | ||||| |||||||| |||||| ||||| || ||||||| ||||||||||||| ||||||    
T  54967135 aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgtttttt 54967061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 7246051 - 7246097
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  7246051 gtcctttaagtttgatatttgtaacaaattggtcgtttaagttattt 7246097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 919 - 981
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    ||||||||||  ||| |||||||||||  |||||||||||||||||||||| |||||| ||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 39077795 - 39077889
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||| ||||||  ||| ||||| |||||||||||| ||||||||||| |||  ||| || ||||| || ||||||| ||||||||||||| ||||    
T  39077795 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgtttt 39077889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 45038454 - 45038408
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  45038454 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 45038408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 825
Target Start/End: Original strand, 26782353 - 26782398
Alignment:
Q  780 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26782353 tcctttaagtttgatatttgtaacagattggtcctttaagttattt 26782398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 17231973 - 17232033
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||  || |||||||||||| |||||||||| ||  ||||||||||||||||    
T  17231973 aaattacatcagcagttctttaagtttgaggtttgtaacagataagtcttttaagttattt 17232033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 26782585 - 26782525
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||  | |||||||||||||||| |||||||| |||||| | |||||||||||||    
T  26782585 aaattacatttggggtcctttaagtttgaggtttgtaatatattgattttttaagttattt 26782525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 30581481 - 30581561
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  |||| |||||||||||||||| |||||| || ||| ||||||||||  || ||||||||| ||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttt 30581561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 45038174 - 45038234
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||   ||| |||||||||||| |||||||| |||||| |||||||||||||||    
T  45038174 aaattacatccagggttctttaagtttgaggtttgtaatatattgatcttttaagttattt 45038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 45787008 - 45787068
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||| | ||||||||||||||||||||  ||||||||||| | | ||||||||||||||    
T  45787008 aaattaaaccagaggtcctttaagtttgagctttgtaacatactaggcttttaagttattt 45787068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 781 - 825
Target Start/End: Complemental strand, 55617627 - 55617583
Alignment:
Q  781 cctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  55617627 cctttaagtttgaggtttgcaacatatttgtcttttaagttattt 55617583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 781 - 825
Target Start/End: Complemental strand, 55624931 - 55624887
Alignment:
Q  781 cctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  55624931 cctttaagtttgaggtttgcaacatatttgtcttttaagttattt 55624887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 13256398 - 13256496
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||| | || |||| |||||||| ||||||  ||  || |||||||||| ||| ||||||||| ||||||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtttttt 13256496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 939 - 982
Target Start/End: Complemental strand, 21489203 - 21489160
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||||||||||||| |||||||| |||||| |||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccattt 21489160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Complemental strand, 24684384 - 24684337
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||| ||| | ||||||||||||||||||||    
T  24684384 ggtcctttaagtttgaggtttataatagattggtcttttaagttattt 24684337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 783 - 826
Target Start/End: Complemental strand, 41083328 - 41083285
Alignment:
Q  783 tttaagtttgatgtttgtaacatattggtcttttaagttatttc 826  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||    
T  41083328 tttaagtttgaggttcgtaacagattggtcttttaagttatttc 41083285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Complemental strand, 41519492 - 41519445
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  41519492 ggtcctttaagtttgaggtttctaacaaattagtcttttaagttattt 41519445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 937 - 976
Target Start/End: Complemental strand, 44718684 - 44718645
Alignment:
Q  937 ctaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  44718684 ctaaagctcccgcatacgcagggtctgggaaggggtccca 44718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 812
Target Start/End: Complemental strand, 51950831 - 51950784
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtc 812  Q
    ||||||||||||| ||||||||||||||| |||||||| | |||||||    
T  51950831 aaattacatcagaagtcctttaagtttgaagtttgtaatagattggtc 51950784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 2470186 - 2470140
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||| ||||| |||||||| ||||||||| ||||||||||||    
T  2470186 gtcctttaaatttgaggtttgtaatatattggtcctttaagttattt 2470140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 783 - 825
Target Start/End: Complemental strand, 9999564 - 9999522
Alignment:
Q  783 tttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||    
T  9999564 tttaagtttgaggtttgtaacagattggtcatttaagttattt 9999522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 920 - 1014
Target Start/End: Original strand, 12711450 - 12711544
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||  ||| |||||||| | ||||||||||  |||| | ||||| |||||  ||||| |||||||||| |||  |||||||||||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttt 12711544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 976
Target Start/End: Complemental strand, 19028047 - 19027989
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||| |  ||| |||||||||||||||||| |  ||||||||||||||||||||    
T  19028047 aaaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtccca 19027989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 21322108 - 21322062
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| |||  |||||||||||||||    
T  21322108 gtcctttaagtttgaggtttgtaacacatttttcttttaagttattt 21322062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 930 - 968
Target Start/End: Original strand, 37038134 - 37038172
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaag 968  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  37038134 tggtgcactaaagctcccgcatacgcagggtacgggaag 37038172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 937 - 1014
Target Start/End: Original strand, 39029078 - 39029156
Alignment:
Q  937 ctaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||| ||||||||||| |||  |||||| || ||| ||||||||||  || ||||||||| ||||||    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgtttttt 39029156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 40395158 - 40395204
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||||||| ||  ||||||||||||    
T  40395158 gtcctttaagtttgaggtttgtaacatattagttctttaagttattt 40395204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 46196169 - 46196215
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| |||||| |||||    
T  46196169 gtcctttaagtttgacgtttgtaacaaattggtcctttaagatattt 46196215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 825
Target Start/End: Complemental strand, 45038513 - 45038468
Alignment:
Q  780 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||| |||||||| | ||||||| ||||||||||||    
T  45038513 tcctttaagtttgaggtttgtaatagattggtcatttaagttattt 45038468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 69; Significance: 2e-30; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 46967 - 46871
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttt 46871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 24771 - 24867
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  | | |||||||||||||||||||||||||| |||||||| |||||| ||||| |||| ||||| ||| ||||||||| ||||||    
T  24771 aaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtttttt 24867  T

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Target: scaffold0057; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 916 - 1005
Target Start/End: Complemental strand, 43796 - 43706
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccg-ggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||||||||||||   || ||||| |||||||||||| |||||||||| | |||| |||||| ||||| |||||||||| ||| |||||||    
T  43796 ataaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttacc 43706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 938 - 1007
Target Start/End: Original strand, 46726 - 46796
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||||||||||||| ||||||| |||||| || ||| || ||||||| ||| |||||||||    
T  46726 taaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 1e-25; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 35261815 - 35261719
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttt 35261719  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 915 - 1014
Target Start/End: Complemental strand, 36720935 - 36720836
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||  ||| |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  36720935 aataaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 36720836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 916 - 1014
Target Start/End: Complemental strand, 44530287 - 44530189
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||| ||||  ||| |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  44530287 ataaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 44530189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 12626027 - 12625930
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttt 12625930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 921 - 1014
Target Start/End: Complemental strand, 29877227 - 29877134
Alignment:
Q  921 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||| | |||| |||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 29877134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 8897763 - 8897859
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| || ||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||| | | ||||||||||||||||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctatttttt 8897859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 28817625 - 28817721
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||| ||| ||||||||| ||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgtttttt 28817721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 935 - 1013
Target Start/End: Complemental strand, 13160820 - 13160742
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  13160820 cactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 13160742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 920 - 1013
Target Start/End: Complemental strand, 45071398 - 45071305
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||  ||| |||| ||||||||||||||||| |||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 45071305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 389764 - 389685
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||| ||||||||||||||| || ||||  ||||||||||| |||||||||| ||||||||||||| ||||||    
T  389764 cactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttt 389685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 919 - 1014
Target Start/End: Complemental strand, 2626657 - 2626562
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||  |||| |||| ||||||||||||| |||||||| ||||||| |||||||||||| |||||||||| |||  |||||||| ||||||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt 2626562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 918 - 1013
Target Start/End: Original strand, 18164759 - 18164854
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| ||||||  ||| |||||||||||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||||||||||| |||||    
T  18164759 aaaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgttttt 18164854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 12670249 - 12670343
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||| |||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  12670249 aaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 12670343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 916 - 1014
Target Start/End: Original strand, 39460991 - 39461091
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||| || |||  || |||||||||| ||| |||||| || |||||    
T  39460991 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttt 39461090  T
Q  1014 t 1014  Q
    |    
T  39461091 t 39461091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 939 - 1014
Target Start/End: Original strand, 5135309 - 5135384
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||  || ||||||||| ||||||    
T  5135309 aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctctttttt 5135384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 764 - 823
Target Start/End: Original strand, 24827341 - 24827400
Alignment:
Q  764 aaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttat 823  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  24827341 aaaattacatcataggtcctttaagtttgaggtttgtaacagattggtcatttaagttat 24827400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 918 - 993
Target Start/End: Complemental strand, 26102653 - 26102578
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| ||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 29521701 - 29521780
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||| |||| ||  ||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  29521701 cactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgtttttt 29521780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 918 - 1005
Target Start/End: Original strand, 30454096 - 30454183
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||| ||| ||| |||||||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttacc 30454183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 20284085 - 20284166
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  20284085 cactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttt 20284166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 21070713 - 21070794
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  21070713 cactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttt 21070794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 10857965 - 10857869
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||||||| ||||| |||||  |||||| || || |||||||||  ||| ||||||||| ||||||    
T  10857965 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttt 10857869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 939 - 1007
Target Start/End: Original strand, 24365079 - 24365147
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||| |||||||||  ||| |||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccct 24365147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 41151390 - 41151450
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| || |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  41151390 aaattacaccataggtcctttaagtttgagttttgtaacatattggtcctttaagttattt 41151450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 20870061 - 20869963
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| || |||||| |||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 20869963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 914 - 1012
Target Start/End: Complemental strand, 19729480 - 19729382
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||    || ||||| |||||||| ||| |||||||||||||||| |||||| ||||| ||||||||||  || ||||||||| ||||    
T  19729480 aaataaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 918 - 968
Target Start/End: Original strand, 27468091 - 27468141
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaag 968  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  27468091 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 937 - 1014
Target Start/End: Original strand, 8483956 - 8484033
Alignment:
Q  937 ctaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||| |||| || |||||| || || |||||||||| ||| |||| |||| ||||||    
T  8483956 ctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgtttttt 8484033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 1014
Target Start/End: Original strand, 40604904 - 40605000
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||   ||| |||||||||||||||||||| |||||   ||||||  ||| |||||||||||||||||| ||||||||| || |||||||    
T  40604904 taaaagggcaattcggtgcactaaagctcccgcatacgtagggtttcggaagggatcc-atcatttagtgtattgtacgcaaccttatccaatttttt 40605000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 935 - 1007
Target Start/End: Complemental strand, 5689750 - 5689678
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||||| |||||||| ||| |||||||| || ||| ||||| |||||||||| ||| |||||||||    
T  5689750 cactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccct 5689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 1007
Target Start/End: Original strand, 7136526 - 7136617
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||| |||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  7136526 aaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 7136617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 6760960 - 6760862
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||| ||||| |||||| |||  || |||||||||| | | ||||||||| ||||||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtttttt 6760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 25250660 - 25250562
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||| |||||||||| || |||| |||||||| |||||| |||  || |||||||||| ||| || |||||||||||||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttttt 25250562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 919 - 982
Target Start/End: Complemental strand, 28407538 - 28407475
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||  ||| || ||||||||||||||||| |||||||||||||| |||||| |||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 935 - 976
Target Start/End: Complemental strand, 27508029 - 27507988
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  27508029 cactaaagctcccgcatacgcagggttcgggaaggggtccca 27507988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 916 - 1013
Target Start/End: Complemental strand, 31457310 - 31457213
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||   ||| ||||| ||||||||||||||||||||  ||||||| |||| | |||||  ||||||||| ||| ||||  |||||||||    
T  31457310 ataaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctattttt 31457213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 918 - 983
Target Start/End: Original strand, 35107310 - 35107375
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattta 983  Q
    |||||||||||  ||| |||||||||| |||||||| ||| ||||||||||| |||||| ||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattta 35107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 6220168 - 6220228
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||| |  |||||||||||||||| ||||| |||| ||||||| ||||||||||||    
T  6220168 aaattacattaagggtcctttaagtttgaggtttgaaacaaattggtcctttaagttattt 6220228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 822
Target Start/End: Original strand, 9399814 - 9399858
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagtta 822  Q
    |||||||||||||||| |||||||||||||||||  |||||||||    
T  9399814 ggtcctttaagtttgaggtttgtaacatattggttctttaagtta 9399858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 9400179 - 9400119
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||| ||||| ||| || ||||||||||| ||||||||||||||| || ||||||||||||    
T  9400179 aaatcacatcggagatcttttaagtttgaggtttgtaacatattgatcgtttaagttattt 9400119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 26954272 - 26954173
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||   || |||||||||||||||||| ||  |||| ||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 26954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 777 - 825
Target Start/End: Original strand, 27052405 - 27052453
Alignment:
Q  777 aggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||||||||||| | |||||||  |||||||||||    
T  27052405 aggtcctttaagtttgatgtttgtaatagattggtcccttaagttattt 27052453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 918 - 998
Target Start/End: Complemental strand, 16013592 - 16013510
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaa 998  Q
    |||||| ||||  ||| |||||||||||||||||| |||||||| ||||||| ||| || ||  |||||||||||||| ||||    
T  16013592 aaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgcaa 16013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 919 - 990
Target Start/End: Complemental strand, 17823711 - 17823640
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 990  Q
    ||||||||||  ||| |||||||||||| ||||| ||||||| |||||||| || ||| ||||| |||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtatt 17823640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 982
Target Start/End: Complemental strand, 18595957 - 18595910
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  18595957 cactaaaactcccgcatacacagggtccgggaaggggtcctatcattt 18595910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Complemental strand, 24909743 - 24909696
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  24909743 ggtcctttaagtttgagatttgtaacaaattggtcctttaagttattt 24909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 821
Target Start/End: Original strand, 42667432 - 42667487
Alignment:
Q  766 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 821  Q
    |||||||||| | ||||||||||||||| |||||||||| || |||| ||||||||    
T  42667432 aattacatcacatgtcctttaagtttgacgtttgtaacagataggtcctttaagtt 42667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 982
Target Start/End: Original strand, 44781520 - 44781567
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||||||||||||||||||| |||| || |||||| |||||    
T  44781520 cactaaagctcccgcatacgcagggtctgggacggggtcccaacattt 44781567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 6220521 - 6220475
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  6220521 gtcctttaagtttgaggtttgtaacaaattggttctttaagttattt 6220475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 16225140 - 16225059
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||| || |||||||||||||  ||||| |||  || |||||||||| |||  |||||||| ||||||    
T  16225140 cactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgtttttt 16225059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 938 - 976
Target Start/End: Complemental strand, 24245565 - 24245527
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtccca 24245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 24827416 - 24827462
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||||||||| | ||| ||| ||||||||||||    
T  24827416 gtcctttaagtttgatgtttgtaatagatttgtcatttaagttattt 24827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 27052672 - 27052626
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  27052672 gtcctttaagtttgaggtttataacagattggtcctttaagttattt 27052626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 776 - 825
Target Start/End: Original strand, 27127874 - 27127922
Alignment:
Q  776 gaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  27127874 gaggtcctttaagtttga-gtttgtaacagattggttatttaagttattt 27127922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Complemental strand, 27128220 - 27128168
Alignment:
Q  772 atcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||||||| |||||||| | |||||| ||||| |||||||    
T  27128220 atcagaggtcctttaagtttgaggtttgtaatagattggt-ttttaggttattt 27128168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 24449026 - 24448930
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||||||||||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctatttttt 24448930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 919 - 1013
Target Start/End: Original strand, 7097760 - 7097854
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||| ||| || ||||| |||||||||| ||||||||||||| |||||    
T  7097760 aaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgttttt 7097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 917 - 993
Target Start/End: Complemental strand, 16957451 - 16957375
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgta 16957375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 38879720 - 38879621
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 38879621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 917 - 1012
Target Start/End: Complemental strand, 32703559 - 32703464
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 32703464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 917 - 1013
Target Start/End: Complemental strand, 41014455 - 41014359
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||  ||| |||||||||||||||||| || |||||| |||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 41014359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 937 - 1012
Target Start/End: Complemental strand, 43574723 - 43574648
Alignment:
Q  937 ctaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||| ||| ||||||||| ||||    
T  43574723 ctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgtttt 43574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 8169983 - 8170077
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| |||| || |||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 8170077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 920 - 1014
Target Start/End: Original strand, 12006329 - 12006425
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| ||| |||||||||||||||||| |||||||| ||||||| |||||| |||  || |||||||||| | | ||||||||||||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctatttttt 12006425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 919 - 1007
Target Start/End: Original strand, 34154814 - 34154902
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||  ||| ||||| |||| ||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| |||||||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 34154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 16880663 - 16880742
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||| |||||||||||  ||| || ||||| |||||||||| ||| ||||||||| ||||||    
T  16880663 cactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgtttttt 16880742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 43334340 - 43334243
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||||| ||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 43334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 915 - 1014
Target Start/End: Original strand, 4619100 - 4619201
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||  ||| ||||||||||| |||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||    
T  4619100 aataaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 4619199  T
Q  1013 tt 1014  Q
    ||    
T  4619200 tt 4619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 935 - 1013
Target Start/End: Original strand, 19142959 - 19143037
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||| |||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||| ||||||||| |||||    
T  19142959 cactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgttttt 19143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 35710447 - 35710353
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| ||| | |||||||||| |||||| ||||| |||||||| | ||| ||||||||||||||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctatttt 35710353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 761 - 825
Target Start/End: Original strand, 28559216 - 28559280
Alignment:
Q  761 gggaaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||| ||||  |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  28559216 gggaaaattatatcacgggtcctttaagtttgacgtttgtaacagattggtcctttaagttattt 28559280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 1014
Target Start/End: Original strand, 31694119 - 31694203
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||| ||||||| |||||||||||||| |||| ||||||||||||||||| |  |||||||||| ||| | ||| ||||||||||    
T  31694119 tggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctatttttt 31694203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 942 - 1013
Target Start/End: Complemental strand, 2838890 - 2838819
Alignment:
Q  942 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||||||||||||| |||||  ||||| ||||| |||||||||| ||| ||||||||| |||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgttttt 2838819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 938 - 1014
Target Start/End: Complemental strand, 27328870 - 27328792
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||| |||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  27328870 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 27328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 935 - 1013
Target Start/End: Original strand, 5873338 - 5873416
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||||||||||||| ||||||| |||||||||| || || ||||| ||||   | |||||||||||||||    
T  5873338 cactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccctattttt 5873416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 922 - 1012
Target Start/End: Complemental strand, 7368528 - 7368438
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||  ||| ||||| ||||||| |||| |||||||||||||||| |||||| || || |||||||||| ||| ||||||||| ||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgtttt 7368438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 919 - 1014
Target Start/End: Original strand, 13801767 - 13801864
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| ||||||||||| |||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 13801864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 935 - 981
Target Start/End: Complemental strand, 25622579 - 25622533
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25622579 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 938 - 982
Target Start/End: Original strand, 10306493 - 10306537
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10306537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 821
Target Start/End: Complemental strand, 10827458 - 10827402
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 821  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||||| ||||||||    
T  10827458 aaattacatcagaggtcatttaagtttgaggtttgtaataaattggtcctttaagtt 10827402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 17400899 - 17400839
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| || | |||||||||||||||  ||||||||||||||||| ||||||||||||    
T  17400899 aaattacaccataagtcctttaagtttgagatttgtaacatattggtcatttaagttattt 17400839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 939 - 1007
Target Start/End: Complemental strand, 22600569 - 22600501
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||||||||| ||||||||||  ||||| ||||| ||||||||||  || |||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccct 22600501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 917 - 969
Target Start/End: Complemental strand, 32354264 - 32354212
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    ||||||||||||  ||| ||||||||||||||||||| |||||||||||||||    
T  32354264 taaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaagg 32354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 35461421 - 35461481
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| ||  |||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  35461421 aaattacaccacgggtcctttaagtttgaggtttgtaatatattggtcctttaagttattt 35461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 936 - 1014
Target Start/End: Complemental strand, 1405305 - 1405227
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||| |||||||||||| ||||||| | |||| | |||||| ||||| |||||||||| |||| ||||| |||||||||    
T  1405305 actagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctatttttt 1405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 976
Target Start/End: Original strand, 16028623 - 16028681
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| ||||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccca 16028681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 16327157 - 16327203
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  16327157 gtcctttaagtttgaggtttgtaacagattggtcgtttaagttattt 16327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 25456334 - 25456380
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  25456334 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 25456380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 3771476 - 3771379
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| |  ||| ||||||||||||| ||||| ||| ||||||||||| |||||| || || |||||||||   || ||||||||| ||||||    
T  3771476 taaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttttt 3771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 28516432 - 28516529
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttag-tgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||| |||| |||||||||||| |||| ||||||||| ||||| | |||||| ||||| | ||||||||| ||| || || ||| ||||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgtttttt 28516529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 914 - 1007
Target Start/End: Complemental strand, 30006464 - 30006372
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||| ||||  ||| |||||||||||||||||||  |||  ||||||||| |||||| ||||||||||| ||||  || |||||||||    
T  30006464 aaataaaagg-caacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccct 30006372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 16327083 - 16327143
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| ||||||||||||||||| || |||||||| | |||| || ||||||||||||    
T  16327083 aaattacaccagaggtcctttaagttagaggtttgtaatagattgatcgtttaagttattt 16327143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 823
Target Start/End: Complemental strand, 19550356 - 19550312
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttat 823  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||    
T  19550356 gtccttcaagtttgatgtttgtaacagattgatcttttaagttat 19550312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 922 - 982
Target Start/End: Original strand, 21784335 - 21784395
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccattt 21784395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 35461788 - 35461728
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||| ||||||  ||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  35461788 aaattgcatcaggtgtcctttaagtttgaggtttgtaatagattggtcctttaagttattt 35461728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Complemental strand, 19550406 - 19550359
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||||||||| |||| || ||||||||||||    
T  19550406 ggtcctttaagtttgaggtttgtaacagattgttcctttaagttattt 19550359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 917 - 976
Target Start/End: Complemental strand, 39801653 - 39801594
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||| ||||||  ||| |||||||||||||||||||| |||||| ||||||| ||||||    
T  39801653 taaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtccca 39801594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 12713165 - 12713119
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||    
T  12713165 gtcctttaagtttgagatttctaacatattgatcttttaagttattt 12713119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 12774429 - 12774383
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||    
T  12774429 gtcctttaagtttgagatttctaacatattgatcttttaagttattt 12774383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 935 - 969
Target Start/End: Complemental strand, 13774984 - 13774950
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaagg 969  Q
    |||||||||||||||||||||||||||||| ||||    
T  13774984 cactaaagctcccgcatacgcagggtccggaaagg 13774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 16327377 - 16327331
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| |||| || ||||||||||||    
T  16327377 gtcctttaagtttgaggtttgtaacagattgatcctttaagttattt 16327331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 775 - 817
Target Start/End: Complemental strand, 28559578 - 28559536
Alignment:
Q  775 agaggtcctttaagtttgatgtttgtaacatattggtctttta 817  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||    
T  28559578 agaggtcctttaagtttgatgtttgtaacaaattagtccttta 28559536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 29334533 - 29334435
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt-tagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| |  ||| || ||||| |||| ||||||||||||||||||| | |||||| |||| | |||||||||| ||| ||||||| | ||||||    
T  29334533 taaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgtttttt 29334435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 939 - 999
Target Start/End: Original strand, 12575680 - 12575741
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaac 999  Q
    |||||||| ||||||||||||||| |||||| |||||| || ||| |||||||||| |||||    
T  12575680 aaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgcaac 12575741  T

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Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 920 - 1014
Target Start/End: Complemental strand, 20135740 - 20135644
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||  ||| |||| ||||||| ||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||| | ||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttttt 20135644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 941 - 982
Target Start/End: Original strand, 21542489 - 21542530
Alignment:
Q  941 agctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccattt 21542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 919 - 976
Target Start/End: Original strand, 30877564 - 30877621
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||||  ||| ||||| ||||||| |||| |||||||||||||||| ||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtccca 30877621  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 42924846 - 42924929
Alignment:
Q  935 cactaaagctcccgcatacgcagggt--ccgggaaggagtcccatcattta--gtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| |||||||||||||||  | |||||||  | |||||||||   |||||||||| ||||||||||||| ||||||    
T  42924846 cactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgtttttt 42924929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 1e-25; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 40272811 - 40272907
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 40272907  T

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Target: chr3; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 54484849 - 54484753
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||| | ||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 54484753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 919 - 1012
Target Start/End: Complemental strand, 31593004 - 31592911
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||  ||| ||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||| ||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgtttt 31592911  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 919 - 1012
Target Start/End: Complemental strand, 39203671 - 39203578
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||  ||| |||||||||||||||||| ||| |||||||||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 39203578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 938 - 1014
Target Start/End: Original strand, 8247706 - 8247784
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||||||||||||||| |||  || |||||||||| ||||||||||||| ||||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtttttt 8247784  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 45948854 - 45948933
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||||| ||||| |||||| || || |||||||||| ||| ||||||||||||||||    
T  45948854 cactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctatttttt 45948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 935 - 1013
Target Start/End: Original strand, 6411838 - 6411916
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||| ||| ||||||||| |||||    
T  6411838 cactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttt 6411916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 916 - 1007
Target Start/End: Original strand, 13628787 - 13628880
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  13628787 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 13628880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 918 - 1004
Target Start/End: Original strand, 52926218 - 52926304
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 1004  Q
    |||||||||||  ||| | ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 920 - 1013
Target Start/End: Complemental strand, 22609921 - 22609828
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||  ||| |||| ||||||||||||||||| |||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 22609828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 918 - 1013
Target Start/End: Complemental strand, 26869864 - 26869769
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||  ||| ||| |||||||||||||||||| ||||||| |||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 26869769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 1217246 - 1217152
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||  ||||| |||||||||| ||| ||||||||| ||||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgtttt 1217152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 15797378 - 15797284
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| ||||||| |||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 34771363 - 34771457
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||| |  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 916 - 1013
Target Start/End: Complemental strand, 16735600 - 16735503
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||||   || |||| ||||| |||||||||||| ||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  16735600 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 16735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 921 - 1014
Target Start/End: Complemental strand, 26573282 - 26573189
Alignment:
Q  921 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||| | |||| ||||||||||| |||||||||||||||||||| || |||||| || || |||||||||| ||| ||||||||| ||||||    
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgtttttt 26573189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 920 - 1012
Target Start/End: Original strand, 22122918 - 22123010
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||  ||| ||||| ||||| |||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 22123010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 917 - 993
Target Start/End: Original strand, 25517168 - 25517244
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    ||||||||||||  ||| |||||||||||| ||||||||||| |||||||||| |||||| ||||| ||||||||||    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgta 25517244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 917 - 1014
Target Start/End: Original strand, 29366718 - 29366817
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||   || ||||||||||||| ||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 29366817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 919 - 1007
Target Start/End: Original strand, 10795423 - 10795513
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| |||||| |||||| ||  ||| |||||||||| ||| |||||||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 10795513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 938 - 1014
Target Start/End: Original strand, 46421054 - 46421132
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 46421132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 936 - 1014
Target Start/End: Original strand, 54374362 - 54374441
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||| |||||||||||||||| |||||| || ||| ||| |||||| ||| ||||||||||||||||    
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctatttttt 54374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 1014
Target Start/End: Original strand, 45786214 - 45786311
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| |||||||||||| |||| ||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 45786311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 921 - 1014
Target Start/End: Original strand, 353351 - 353446
Alignment:
Q  921 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 353446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 13730601 - 13730699
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || ||||||||||  || ||||||||| ||||||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 13730699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 49013472 - 49013570
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||| || || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 49013570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 932 - 982
Target Start/End: Complemental strand, 10300635 - 10300585
Alignment:
Q  932 gtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  10300635 gtacattaaagctcccgcatacgtagggtctgggaaggagtcccatcattt 10300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 916 - 974
Target Start/End: Original strand, 10484613 - 10484671
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 974  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||| |||||| ||||    
T  10484613 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 975
Target Start/End: Complemental strand, 516570 - 516513
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccc 975  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtccc 516513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 1004
Target Start/End: Original strand, 5173718 - 5173806
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttac 1004  Q
    |||||||||||  ||| |||||||||||||||||||||| |||||||||||| | |||| ||  ||| |||||||| | ||||||||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttac 5173806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 1014
Target Start/End: Original strand, 12914033 - 12914130
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  ||| || | ||||||||||||| |||||||| ||||||| ||| || ||||| |||||||||| ||  ||||||||| ||||||    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgtttttt 12914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 967
Target Start/End: Complemental strand, 47624257 - 47624208
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa 967  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  47624257 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 53996564 - 53996661
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||| |  ||| ||||||||||||| ||||||||| ||| ||||||| |||||| || ||| |||||||||| ||| ||||||||| ||||||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttttt 53996661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 938 - 1014
Target Start/End: Complemental strand, 9276401 - 9276326
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||| |||||||||||||||||||||||| | || ||| ||||| |||||||||| ||| ||||||||| ||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggt-ccaccatttggtgtattgtacgcagccttaccctgtttttt 9276326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 982
Target Start/End: Original strand, 24851300 - 24851364
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||  ||| |||||||||||||||||| ||||| |||||||||| |||||| |||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 916 - 976
Target Start/End: Complemental strand, 30452955 - 30452895
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| ||||||    
T  30452955 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccca 30452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 34420659 - 34420739
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||| |||||||| |||||||||||| |||||| || ||| |||||| ||| ||| ||||||||| ||||||    
T  34420659 cactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtttttt 34420739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 39541521 - 39541461
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||| |||||||||||||||| |||||||||  |||| || ||||||||||||    
T  39541521 aaattacatcaggggtcctttaagtttgaggtttgtaacggattgatcctttaagttattt 39541461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 47573680 - 47573740
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||  |||||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  47573680 aaattacatcatgggtcctttaagtttgaggtttgtaacatattagtcctttaaattattt 47573740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 993
Target Start/End: Complemental strand, 24578083 - 24578008
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    |||||||||||  ||| ||||| || ||||||||| | |||||| ||||| |||||||| ||||||||||||||||    
T  24578083 aaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgta 24578008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 766 - 825
Target Start/End: Complemental strand, 26976587 - 26976528
Alignment:
Q  766 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||| ||||||||||||||||  ||||||||||||  ||| ||||||||||||    
T  26976587 aattacatcaggggtcctttaagtttgagctttgtaacatataagtcctttaagttattt 26976528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 766 - 825
Target Start/End: Complemental strand, 28814149 - 28814090
Alignment:
Q  766 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||| |||||||||| ||||| |||||||| | ||| ||||||||||||||||    
T  28814149 aattacatcaggggtcctttaaatttgaggtttgtaatagattagtcttttaagttattt 28814090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 47069526 - 47069573
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  47069526 ggtcctttaaatttgaggtttgtaacatattggtcctttaagttattt 47069573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 950 - 1013
Target Start/End: Complemental strand, 47624167 - 47624104
Alignment:
Q  950 atacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| ||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  47624167 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 47624104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 935 - 1004
Target Start/End: Original strand, 829458 - 829528
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttac 1004  Q
    |||||||||||| ||||||||||||| |||||||| |||||| || ||| |||||||||| ||||| ||||    
T  829458 cactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttac 829528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 14987100 - 14987019
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||| ||| |||||||||| | |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  14987100 cactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 14987019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 32186751 - 32186705
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||    
T  32186751 gtcctttaagtttgaggtttgtaacatattgatgttttaagttattt 32186705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 40286525 - 40286479
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  40286525 gtcctttaagtttgaggtttgtaacagattggtcttttgagttattt 40286479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 50332771 - 50332725
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||    
T  50332771 gtcctttaagtttgatgtttgtaataaattgatcttttaagttattt 50332725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 825
Target Start/End: Complemental strand, 13903081 - 13903036
Alignment:
Q  780 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||    
T  13903081 tcctttaagtctgaggtttgtaacatattagtcttttaagttattt 13903036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 935 - 995
Target Start/End: Original strand, 43114884 - 43114944
Alignment:
Q  935 cactaaagctcccgcatacgca-gggtccgggaaggagtcccatcatttagtgtattgtagg 995  Q
    |||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||||||||||    
T  43114884 cactaaagctcccgcatacgcaggggtccaggaagg-gtcccaccatttggtgtattgtagg 43114944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 917 - 962
Target Start/End: Original strand, 54032569 - 54032614
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtcc 962  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||    
T  54032569 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 962
Target Start/End: Original strand, 4495675 - 4495719
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtcc 962  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||    
T  4495675 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 982
Target Start/End: Complemental strand, 25944628 - 25944564
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||| | |||| | ||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  25944628 aaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattt 25944564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 32186448 - 32186507
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||| ||||||| |||||||||||||||| |||||||| ||||||||| |||||| |||||    
T  32186448 aaataacatcag-ggtcctttaagtttgaggtttgtaatatattggtcctttaagctattt 32186507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 777 - 825
Target Start/End: Original strand, 45131436 - 45131484
Alignment:
Q  777 aggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||||| |||||||||| |||| || ||||||||||||    
T  45131436 aggtcctttaagtttgaggtttgtaacagattgatcatttaagttattt 45131484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 47891472 - 47891412
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||  ||||||||||||||||  ||||||||| |||| || ||||||||||||    
T  47891472 aaattacatcaagggtcctttaagtttgaaatttgtaacaaattgatcctttaagttattt 47891412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 821
Target Start/End: Original strand, 3377014 - 3377069
Alignment:
Q  766 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 821  Q
    ||||||| || ||||||||||||||||| |||||||||| || |||| ||||||||    
T  3377014 aattacaccacaggtcctttaagtttgacgtttgtaacagataggtcctttaagtt 3377069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 7943131 - 7943052
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||| |||| || ||||  ||||| |||||  ||||||||| |||  |||||||| ||||||    
T  7943131 cactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgtttttt 7943052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 1013
Target Start/End: Complemental strand, 33926224 - 33926145
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt-tagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||| |||||| ||||||||| |||||| |||||| |||| | ||||||||||  || ||||||||| |||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgttttt 33926145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 783 - 825
Target Start/End: Complemental strand, 7607759 - 7607718
Alignment:
Q  783 tttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  7607759 tttaagtttgatgtttgtaacatattgat-ttttaagttattt 7607718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 14964889 - 14964934
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  14964889 gtcctttaagtttga-gtttgtaacagattggtcatttaagttattt 14964934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 775 - 825
Target Start/End: Original strand, 26976371 - 26976421
Alignment:
Q  775 agaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||||||| |||||||||| || |||| | ||||||||||    
T  26976371 agaggtcctttaagtttgaggtttgtaacagataggtcctctaagttattt 26976421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 920 - 1014
Target Start/End: Complemental strand, 33235687 - 33235594
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||| |||| |||||||||| ||||||||| | |||| | || || |||||| ||||||||||||||||  ||  |||||||| ||||||    
T  33235687 aagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcgaggg-gtcccaccatttagtgtattgtacacagtcttaccctgtttttt 33235594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 40286297 - 40286343
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||| |||||||||| || ||||||||||||    
T  40286297 gtcctttaagtttgaggtttataacatattgttcctttaagttattt 40286343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 960
Target Start/End: Complemental strand, 40390399 - 40390357
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggt 960  Q
    |||||||||||  ||| ||||||||||||||||||||||||||    
T  40390399 aaaagggcaacccggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 820
Target Start/End: Complemental strand, 47069808 - 47069766
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagt 820  Q
    |||||||||||||||| |||||||||| ||||||| |||||||    
T  47069808 ggtcctttaagtttgaggtttgtaacagattggtcatttaagt 47069766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 47891398 - 47891352
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||| ||||||| ||||| |||||||||||| ||||||||||||    
T  47891398 gtcctttgagtttgaggtttgcaacatattggtcctttaagttattt 47891352  T

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Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 50624952 - 50625046
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||| |  ||| ||||||||||||| | ||||||||| || |||||| |||||| ||  | |||||||||| || |||||||||| ||||    
T  50624952 aaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgctaccttaccctttttt 50625046  T

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Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 936 - 1014
Target Start/End: Complemental strand, 9607345 - 9607265
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||| || ||||| ||||||| |||||| |||  || ||||||| || ||| ||||||||| ||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgtttttt 9607265  T

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Target: chr2 (Bit Score: 61; Significance: 1e-25; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 10546299 - 10546203
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 10546203  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 917 - 1012
Target Start/End: Complemental strand, 9671316 - 9671221
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 9671221  T

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Target: chr2; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 915 - 1012
Target Start/End: Original strand, 21779257 - 21779354
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  21779257 aataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 21779354  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 916 - 1007
Target Start/End: Original strand, 8455313 - 8455404
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||| ||| |||||||||    
T  8455313 ataaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 8455404  T

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Target: chr2; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 918 - 1013
Target Start/End: Complemental strand, 14444864 - 14444769
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| |||  || ||||||||| |||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgttttt 14444769  T

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Target: chr2; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 919 - 1014
Target Start/End: Complemental strand, 10543835 - 10543738
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 10543738  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 36871627 - 36871534
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| |||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 36871534  T

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Target: chr2; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 17896396 - 17896300
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  | | ||||||||||||| ||||||||||||||| ||||| |||||| ||||| || ||||||| ||| ||||||||||||||||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttt 17896300  T

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Target: chr2; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 919 - 1014
Target Start/End: Complemental strand, 14530455 - 14530358
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| | | ||||||||| ||||||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtttttt 14530358  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 918 - 1007
Target Start/End: Original strand, 25249737 - 25249826
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||  ||| ||||||||||| |||||||||||||| ||||||||  ||||| ||||| |||||||||| ||| |||||||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccct 25249826  T

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Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 5841167 - 5841068
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  ||  ||||||||| ||| ||||||||||||||||    
T  5841167 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatttttt 5841068  T

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Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 916 - 1004
Target Start/End: Complemental strand, 11514573 - 11514486
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 1004  Q
    ||||||||||||   ||| ||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||| ||| ||||||    
T  11514573 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaagg-gtcccaccatttggtgtattgtacgcagccttac 11514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 930 - 1014
Target Start/End: Original strand, 19977725 - 19977809
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||| ||||||||||||||||||| || ||| ||||||||  ||||| ||||| |||||||||| ||||||||| ||||||||||    
T  19977725 tggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctatttttt 19977809  T

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Target: chr2; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 1014
Target Start/End: Original strand, 26684639 - 26684715
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||| |||||||  |||||| |||||||| ||||||| ||| ||||||| ||||||||    
T  26684639 taaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttt 26684715  T

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Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 938 - 1014
Target Start/End: Original strand, 31821362 - 31821438
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||| |||| | ||| |||| |||||||||||| ||||||||||  |||||||||||||||||||    
T  31821362 taaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctatttttt 31821438  T

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Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 33847785 - 33847725
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  33847785 aaattacactagaggtcctttaagtttgatgtttgtaacatattgttcctttaagttattt 33847725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 766 - 821
Target Start/End: Complemental strand, 5009523 - 5009468
Alignment:
Q  766 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 821  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  5009523 aattacatcatgggtcctttaagtttgaggtttgtaacatattggtcttttaagtt 5009468  T

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Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 24890530 - 24890451
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||| |||||||||||||||||||||| |||||| || || |||||||||| ||| ||||||| | ||||||    
T  24890530 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 919 - 1014
Target Start/End: Original strand, 25079717 - 25079812
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| |||||||||||  |||||||||||||||||||||| |||||| ||||  |||||||||| ||| ||||||| | ||||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttt 25079812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 919 - 1014
Target Start/End: Complemental strand, 25632644 - 25632549
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| |||||||||||||||||||| | ||| ||||||||| ||||| ||||| |||||||||| ||| ||||| ||| ||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgtttttt 25632549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 930 - 1013
Target Start/End: Complemental strand, 30826159 - 30826077
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| |||||||||||||||||| | |||||| ||||||| || ||| ||||| |||||||||| |||||||||||||||||||    
T  30826159 tggtgcactaaagctcccgcatatgtagggtctgggaagg-gttccaccatttggtgtattgtacgcaaccttaccctattttt 30826077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 920 - 1005
Target Start/End: Original strand, 13245096 - 13245181
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||||||||  | |||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||||| |||| ||| |||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 919 - 1012
Target Start/End: Complemental strand, 23397899 - 23397806
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||  ||| ||||| |||||||||||| | |||||||| ||||| |||||| ||||| |||||||||| | | ||||||||||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctatttt 23397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 914 - 982
Target Start/End: Complemental strand, 23488623 - 23488555
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||| |||||  ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  23488623 aaataaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 931 - 1014
Target Start/End: Original strand, 4516363 - 4516446
Alignment:
Q  931 ggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||| || ||||||||||||||||||||| |||||| || || |||||||||| ||| | || |||| ||||||    
T  4516363 ggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgtttttt 4516446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 919 - 974
Target Start/End: Complemental strand, 8576030 - 8575975
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 974  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  8576030 aaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 919 - 974
Target Start/End: Complemental strand, 14544201 - 14544146
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 974  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||| ||||    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtcc 14544146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 916 - 967
Target Start/End: Complemental strand, 22371250 - 22371199
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa 967  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  22371250 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 939 - 1014
Target Start/End: Original strand, 32781308 - 32781383
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 32781383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 919 - 1006
Target Start/End: Original strand, 40762234 - 40762321
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 1006  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||| |||| | |||||| ||||| |||||||||| | | ||||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttaccc 40762321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 1007
Target Start/End: Complemental strand, 17668138 - 17668049
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||  ||| |||||||||||||  ||||||||||| || ||||| || ||| ||||| |||||||||| ||| |||||||||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccct 17668049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 935 - 1012
Target Start/End: Complemental strand, 25641620 - 25641543
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||| |||||||||||| | |||||||| ||||||  |||| |||||||||| ||||| ||||||| ||||    
T  25641620 cactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgtttt 25641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 936 - 1014
Target Start/End: Original strand, 31158456 - 31158536
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||  ||| || ||||||| |||| |||||||| ||||||    
T  31158456 actaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtttttt 31158536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 935 - 976
Target Start/End: Complemental strand, 34766374 - 34766333
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  34766374 cactaaagctcccgcatacgcagggtccgggaaggggtccca 34766333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 1014
Target Start/End: Original strand, 39914304 - 39914400
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  | | |||||||||||||||||||||||||| | |||||| |||||| ||||  ||||||||||  || ||||||||| ||||||    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggt-caggaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttt 39914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 44643660 - 44643563
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| |  ||| |||||| |||||||||||||||||||| ||||||| |||||| ||||| ||  |||||| ||| |||||| || ||||||    
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 939 - 1007
Target Start/End: Original strand, 17380257 - 17380325
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||||| |||||||||| |||||| || ||||||||| |||||||| |  ||||||||||||    
T  17380257 aaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccct 17380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 916 - 976
Target Start/End: Complemental strand, 34080239 - 34080179
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||||||  ||| ||||||| |||||||||| |||||||||||||||| ||||||    
T  34080239 ataaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtccca 34080179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 920 - 976
Target Start/End: Original strand, 40579750 - 40579806
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||||||||  ||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtccca 40579806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 922 - 990
Target Start/End: Original strand, 45235820 - 45235888
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 990  Q
    ||||||| ||||||||||||||||| ||||||| |||||| || |||| |||||| ||||| |||||||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtatt 45235888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 950 - 1013
Target Start/End: Original strand, 12023950 - 12024013
Alignment:
Q  950 atacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||||||| || |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  12023950 atacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 12024013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 939 - 1014
Target Start/End: Original strand, 21377093 - 21377168
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||| |||||||||||| |||||||| |||||| ||||| ||| ||||||  || ||||||||| ||||||    
T  21377093 aaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgtttttt 21377168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 950 - 1013
Target Start/End: Complemental strand, 22371158 - 22371095
Alignment:
Q  950 atacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| ||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  22371158 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 22371095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 24200622 - 24200720
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||||||| | ||||| |||||||||||||||  ||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttt 24200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 1002
Target Start/End: Original strand, 99278 - 99348
Alignment:
Q  932 gtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 1002  Q
    |||||||||||||||||||||| ||||||| | ||||| || ||| ||||| |||||||||| ||| ||||    
T  99278 gtacactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagcctt 99348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 932 - 990
Target Start/End: Original strand, 24059009 - 24059067
Alignment:
Q  932 gtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 990  Q
    |||||||||||||||| |||||||||||||||| |||| |||||| ||| | |||||||    
T  24059009 gtacactaaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 935 - 993
Target Start/End: Original strand, 24860004 - 24860062
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    ||||||||||||||||||||||||||||| ||||| || | | ||||| ||||||||||    
T  24860004 cactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgta 24860062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 25895254 - 25895208
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  25895254 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 25895208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 931 - 989
Target Start/End: Complemental strand, 31525829 - 31525771
Alignment:
Q  931 ggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtat 989  Q
    |||||||||||||||||||||| |||||||| || || | |||||||||||| ||||||    
T  31525829 ggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 918 - 1007
Target Start/End: Complemental strand, 17623700 - 17623611
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||   || |||||||||| || |||||||||| | |||||||| || ||| ||||| |||||||||| ||| |||||||||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccct 17623611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 764 - 821
Target Start/End: Original strand, 44556509 - 44556566
Alignment:
Q  764 aaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 821  Q
    ||||||| |||||||||||||||||||| | |||||||| | ||||||| ||||||||    
T  44556509 aaaattatatcagaggtcctttaagtttaaggtttgtaatagattggtcatttaagtt 44556566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 935 - 967
Target Start/End: Original strand, 124930 - 124962
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaa 967  Q
    |||||||||||||||||||||||||||||||||    
T  124930 cactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 4189105 - 4189045
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||| | ||| ||||||||||| |||||||| |||| |||| ||||||||||||    
T  4189105 aaattacatcaaacgtcttttaagtttgaggtttgtaatatataggtcctttaagttattt 4189045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 9500890 - 9500950
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| ||| |||||||||||||| | || ||||||| ||||||| ||||||||||||    
T  9500890 aaattacaccaggggtcctttaagttttaggtctgtaacagattggtcctttaagttattt 9500950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 14166539 - 14166479
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||  ||| |||||||||||||||||||| | || |||| ||||||||||||    
T  14166539 aaattacatcaggtgtcatttaagtttgatgtttgtaatagataggtcctttaagttattt 14166479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 982
Target Start/End: Complemental strand, 4794921 - 4794874
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||| |||||||||||| ||||| |||||||||| ||||||||||||    
T  4794921 cactagagctcccgcatatgcaggatccgggaaggggtcccatcattt 4794874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 825
Target Start/End: Complemental strand, 5009448 - 5009405
Alignment:
Q  782 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||| ||||||||||||||| || ||||||||||||    
T  5009448 ctttaagtttgaggtttgtaacatattgatcctttaagttattt 5009405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 25894963 - 25895010
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  25894963 ggtcctttaagtttgagatttgtaacaaattggtcctttaagttattt 25895010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 930 - 1013
Target Start/End: Original strand, 39499241 - 39499324
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| |||||||||||||||||||||||| | ||  ||||  ||||| |||||  ||||||||| ||| | |||||||||||||    
T  39499241 tggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctattttt 39499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 976
Target Start/End: Complemental strand, 41409995 - 41409940
Alignment:
Q  921 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||  ||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtccca 41409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Complemental strand, 43699518 - 43699471
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| ||||||||||||||| || ||||| ||||||    
T  43699518 ggtcctttaagtttgaggtttgtaacatattgatcctttaatttattt 43699471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 919 - 969
Target Start/End: Original strand, 3633708 - 3633758
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    ||||||||||  ||| |||||||||||||||||| || |||||||||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaagg 3633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 936 - 982
Target Start/End: Original strand, 19185760 - 19185806
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccattt 19185806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 929 - 974
Target Start/End: Complemental strand, 19615118 - 19615073
Alignment:
Q  929 atggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 974  Q
    ||||| |||||||||||| ||||||||||||| |||||||| ||||    
T  19615118 atggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc 19615073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 825
Target Start/End: Complemental strand, 29379970 - 29379925
Alignment:
Q  780 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  29379970 tcctttaagtttgacgtttgtaacatattagtcctttaaattattt 29379925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 1e-25; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 46247952 - 46248048
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 46248048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 919 - 1014
Target Start/End: Complemental strand, 4349796 - 4349701
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 4349701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 916 - 1012
Target Start/End: Original strand, 34725095 - 34725191
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||| ||||||||| ||||    
T  34725095 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgtttt 34725191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 23768336 - 23768415
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  23768336 cactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgtttttt 23768415  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 915 - 1014
Target Start/End: Complemental strand, 10668389 - 10668288
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||| |||||| |||  || |||||||||| ||||||||||| | ||||    
T  10668389 aataaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttt 10668290  T
Q  1013 tt 1014  Q
    ||    
T  10668289 tt 10668288  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 916 - 993
Target Start/End: Complemental strand, 27474441 - 27474364
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    ||||||||||||   ||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  27474441 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgta 27474364  T

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Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 6925259 - 6925163
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||| ||||||  ||| ||||||||||||||||||||||||| ||||||||| |||||| ||||  |||||||||  ||| ||||||||||||||||    
T  6925259 aaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctatttttt 6925163  T

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Target: chr1; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 917 - 1005
Target Start/End: Complemental strand, 14617198 - 14617110
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||||||| |||  ||| |||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||| |||||||||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttacc 14617110  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 917 - 1014
Target Start/End: Complemental strand, 35005285 - 35005186
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||  ||| ||||||||| ||||||||||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttt 35005186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 914 - 1014
Target Start/End: Original strand, 30395721 - 30395823
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctattt 1011  Q
    |||||||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| |||    
T  30395721 aaataaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttt 30395820  T
Q  1012 ttt 1014  Q
    |||    
T  30395821 ttt 30395823  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 918 - 1013
Target Start/End: Original strand, 31382213 - 31382308
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||  |||||| ||||||||||||||| ||||||||| |||||| |||||| ||||| |||||||||| ||| ||||| ||| |||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgttttt 31382308  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 915 - 1013
Target Start/End: Original strand, 32632553 - 32632651
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||| ||| |||| |||| ||||||||||||| |||||||  ||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  32632553 aataaaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 32632651  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 35253186 - 35253280
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||   ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  35253186 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 35253280  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1013
Target Start/End: Original strand, 42304206 - 42304303
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||   ||| ||||||||||||| ||||||||||||||||||||| |||||| ||  ||| |||||||||| ||||||||||||| |||||    
T  42304206 aaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 930 - 1012
Target Start/End: Complemental strand, 47214656 - 47214574
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||| ||||| |||||||||||| |||||||| ||||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  47214656 tggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 47214574  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 18944805 - 18944706
Alignment:
Q  918 aaaagggcaacatggtacactaaa-gctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttttt 18944706  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 922 - 1014
Target Start/End: Complemental strand, 46991959 - 46991867
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||||||  || ||||||||| ||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgtttttt 46991867  T

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Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 917 - 1012
Target Start/End: Complemental strand, 19414597 - 19414502
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||  ||| ||||| |||||||||||| ||||||| |||||||| |||||| ||||| |||||||||| ||| ||||| ||| ||||    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgtttt 19414502  T

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Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 922 - 993
Target Start/End: Complemental strand, 45402251 - 45402180
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    |||||||  ||| ||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgta 45402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 939 - 1013
Target Start/End: Complemental strand, 11596650 - 11596576
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||||||||||||||| |||||| |||||| ||||| ||||||| || ||| ||||||||| |||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 11596576  T

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Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 12126836 - 12126930
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||   || ||||| |||||||||||| |||||||||||||||| ||||||  |||| |||||||||| ||| ||||||||| ||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgtttt 12126930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 38478281 - 38478375
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||| ||||| || ||| ||||| |||||||||| ||| ||||||||| ||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgtttt 38478375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 935 - 1012
Target Start/End: Original strand, 10378751 - 10378828
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||||||||| |||||||||  ||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  10378751 cactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 917 - 1014
Target Start/End: Original strand, 41319804 - 41319901
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||   || |||| || |||||||||| | ||||| |||||||| |||||||||||| |||||||||| ||| ||||||||| ||||||    
T  41319804 taaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttt 41319901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 938 - 1007
Target Start/End: Complemental strand, 43768278 - 43768209
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||| |||||||||||| ||||||| |||||| || || |||||||||||||| |||||||||    
T  43768278 taaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccct 43768209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 939 - 1007
Target Start/End: Complemental strand, 15505702 - 15505634
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||||||||||| |||||||| |||||| ||||| |||||||||| |||  ||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 15505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 26879753 - 26879693
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  26879753 aaattataccagaggtcctttaagtttgaggtttgtaacagattggtcatttaagttattt 26879693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 918 - 982
Target Start/End: Complemental strand, 50606562 - 50606498
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||| |||||| |||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 915 - 1014
Target Start/End: Original strand, 6983807 - 6983906
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||| |  ||| ||| |||||||| || |||||||||||||| |||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  6983807 aataaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgtttttt 6983906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 18741956 - 18742054
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||| |||  ||| ||||||||||| ||||||||||||||| ||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  18741956 aaaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 935 - 1013
Target Start/End: Original strand, 19974090 - 19974169
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||||||||||||||||  || ||||||||| | ||||||||| ||| |||||||||| |||||||| ||||||||||    
T  19974090 cactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctattttt 19974169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 942 - 1013
Target Start/End: Original strand, 21910673 - 21910743
Alignment:
Q  942 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||| ||| ||||| |||||||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  21910673 gctcccgca-acgtagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 935 - 1007
Target Start/End: Complemental strand, 27201791 - 27201717
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||  ||| |||||||||| ||| |||||||||    
T  27201791 cactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 27201717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 915 - 1014
Target Start/End: Original strand, 20004086 - 20004187
Alignment:
Q  915 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||  ||| |||||||||||||||||| || ||||| ||||||| |||||| |||  || |||||||||| ||| ||||||| | ||||    
T  20004086 aataaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttt 20004185  T
Q  1013 tt 1014  Q
    ||    
T  20004186 tt 20004187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 918 - 1004
Target Start/End: Complemental strand, 23796624 - 23796538
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 1004  Q
    ||||||||| |  ||| |||||||||||| ||||| |||||||| ||||||| ||| || ||||| |||||||||| ||||||||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttac 23796538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 941 - 1007
Target Start/End: Original strand, 25468285 - 25468351
Alignment:
Q  941 agctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||||||||||||| ||||||  |||| | ||||| |||||||||| |||||||||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccct 25468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 34173317 - 34173363
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  34173317 gtcctttaagtttgatgtttgtaacagattggtcctttaagttattt 34173363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 45812536 - 45812630
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||| ||||||  ||| ||||| |||||||||||| |||||||  ||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  45812536 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctctttt 45812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 918 - 1003
Target Start/End: Original strand, 1517310 - 1517395
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctta 1003  Q
    |||||||||||  ||| |||||||||||| |||||||||||||| | ||||| |||||| || || |||||||||| ||| |||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagcctta 1517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 916 - 1014
Target Start/End: Original strand, 19932750 - 19932850
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||| |||||||| |||| |||||| | ||  |||||||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| |||||    
T  19932750 ataatagggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 19932849  T
Q  1014 t 1014  Q
    |    
T  19932850 t 19932850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 1002
Target Start/End: Original strand, 20999848 - 20999933
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 1002  Q
    |||||||||| |  ||| ||||||||||||||| |||||||||| | |||||| | |||||||||| |||||||||| ||| ||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagcctt 20999933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 8197202 - 8197106
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||| ||||| |||| | ||||| ||||| |||| | | ||||||| | ||||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgtttttt 8197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 930 - 982
Target Start/End: Complemental strand, 19701718 - 19701666
Alignment:
Q  930 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||| |||||    
T  19701718 tggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattt 19701666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 942 - 1014
Target Start/End: Original strand, 20982773 - 20982845
Alignment:
Q  942 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||| ||||   ||||| ||||  ||||||||| |||| ||||||||||||||||    
T  20982773 gctcccgcatacgcagggtccgagaagagatcccaccattaggtgtattgttggcagccttaccctatttttt 20982845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 33650383 - 33650443
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| ||| |||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  33650383 aaattacaccaggggtcctttaagtttgaggtttataacagattggtcctttaagttattt 33650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 939 - 1014
Target Start/End: Original strand, 18724565 - 18724640
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||| | |||||||||||||| ||||||  |||| ||||||||||  || ||||||||| ||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgtttttt 18724640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 916 - 971
Target Start/End: Original strand, 19386573 - 19386628
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggag 971  Q
    ||||||| ||||| |||| ||||| |||||||||||| ||||||||||||||||||    
T  19386573 ataaaagagcaacctggttcactagagctcccgcatatgcagggtccgggaaggag 19386628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 934 - 976
Target Start/End: Original strand, 20169104 - 20169146
Alignment:
Q  934 acactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  20169104 acacaaaagctcccgcatatgcagggtccgggaaggagtccca 20169146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 939 - 1005
Target Start/End: Original strand, 44485129 - 44485195
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||||||||||||||| ||| |||||||||| |||| | ||||| |||||||||| ||| |||||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttacc 44485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 935 - 976
Target Start/End: Original strand, 33594147 - 33594188
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  33594147 cactaaagctcccgcatacgcagggtctgggaaggggtccca 33594188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 822
Target Start/End: Complemental strand, 33650753 - 33650696
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtta 822  Q
    |||||||||| |||||||||||||||||| ||| |||||| |||| || |||||||||    
T  33650753 aaattacatccgaggtcctttaagtttgaggttcgtaacagattgatcctttaagtta 33650696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 938 - 1014
Target Start/End: Complemental strand, 50812079 - 50812003
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||  |||||||| || ||| || ||| |||||||||| ||||||||||||| ||||||    
T  50812079 taaagctcccgcatacgcagggcgcgggaaggggt-ccaccattttggtgtattgtacgcaaccttaccctgtttttt 50812003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 917 - 969
Target Start/End: Complemental strand, 9939624 - 9939572
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    |||||||| |||  ||| ||||||||||||||||||||||||||||| |||||    
T  9939624 taaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagg 9939572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 943 - 1007
Target Start/End: Complemental strand, 20036355 - 20036291
Alignment:
Q  943 ctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||| |||||||||||||||||||||| || ||| ||||| |||||||| | |||| ||||||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccct 20036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 935 - 983
Target Start/End: Complemental strand, 30555257 - 30555209
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattta 983  Q
    ||||||||||| ||||||||||||||||| ||||| |||||| ||||||    
T  30555257 cactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattta 30555209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 939 - 1014
Target Start/End: Original strand, 31442409 - 31442485
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||| ||||| ||| ||||||||||| |||||| || ||| |||||||||| ||| ||||||||| ||||||    
T  31442409 aaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttt 31442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 935 - 982
Target Start/End: Original strand, 35117781 - 35117829
Alignment:
Q  935 cactaaagctcccgcat-acgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  35117781 cactaaagctcctgcattacgcagggtccgggaaggggtcccatcattt 35117829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 40892651 - 40892591
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||  | |||||||| ||||||| ||||||||||||||| || ||||||||||||    
T  40892651 aaattacatttgtggtcctttgagtttgaggtttgtaacatattgatcatttaagttattt 40892591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 1013
Target Start/End: Original strand, 2435802 - 2435881
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||||||| || ||||| ||| |||| |||||| || ||| |||||||||| |||  ||||||||||||||    
T  2435802 cactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctattttt 2435881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 982
Target Start/End: Original strand, 4587579 - 4587626
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  4587579 cactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 939 - 982
Target Start/End: Complemental strand, 30682950 - 30682907
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||||||||||| |||||||||||| |||||| |||||    
T  30682950 aaagctcccgcatacgcacggtccgggaaggggtcccaccattt 30682907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 766 - 825
Target Start/End: Original strand, 52913017 - 52913076
Alignment:
Q  766 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||| ||| |||| ||||||||||| |||||||||| ||| ||| ||||||||||||    
T  52913017 aattacaccaggggtcttttaagtttgaagtttgtaacagattagtcctttaagttattt 52913076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 2633601 - 2633555
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  2633601 gtcctttaagtttgaggtttgtgacagattggtcatttaagttattt 2633555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 936 - 1014
Target Start/End: Original strand, 18335305 - 18335383
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||| |||| || ||||  |||| | ||||||||||||  ||||||||| ||||| |||||||| |||||    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaattttt 18335383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 942 - 1012
Target Start/End: Original strand, 34148983 - 34149053
Alignment:
Q  942 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||| ||||| ||||||||| |||||| ||| || ||||| || | ||||| ||||||||||||||||||    
T  34148983 gctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctatttt 34149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 935 - 964
Target Start/End: Original strand, 31272397 - 31272426
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgg 964  Q
    ||||||||||||||||||||||||||||||    
T  31272397 cactaaagctcccgcatacgcagggtccgg 31272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 914 - 1012
Target Start/End: Original strand, 1583 - 1680
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||| ||||| ||| ||||    
T  1583 aaataaaagg-caacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgtttt 1680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 7e-21; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 7879774 - 7879678
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||| | ||||||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 7879678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 38262195 - 38262291
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||   ||| ||||||||||||||||||||||| || |||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||    
T  38262195 aaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatatttttt 38262291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 914 - 1013
Target Start/End: Original strand, 18512448 - 18512547
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||| ||||||||   || ||| ||||||||||||||||||||||||||||||| |||||| ||||  |||||||||| ||| |||||||||||||||    
T  18512448 aaataacagggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 18512547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 917 - 1012
Target Start/End: Original strand, 21172007 - 21172102
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 21172102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 918 - 1012
Target Start/End: Original strand, 42391099 - 42391193
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 42391193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 2541035 - 2541114
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||| |||||| ||| ||| ||||||||| ||||||    
T  2541035 cactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgtttttt 2541114  T

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Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 914 - 1004
Target Start/End: Original strand, 31591104 - 31591194
Alignment:
Q  914 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 1004  Q
    |||||||||||||||  ||| ||||| |||||||||||| ||| |||||||||||| |||||| |||||| ||||||||| ||| ||||||    
T  31591104 aaataaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttac 31591194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 32758395 - 32758301
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| ||||||||||  || ||||||||| ||||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 32758301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 919 - 1005
Target Start/End: Original strand, 48735122 - 48735208
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    ||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| |||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 48735208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 935 - 1012
Target Start/End: Original strand, 10693089 - 10693166
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  10693089 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttt 10693166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 936 - 1013
Target Start/End: Original strand, 34626225 - 34626302
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||| |||||||| | ||| ||||||||| |||||    
T  34626225 actaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgttttt 34626302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 917 - 1006
Target Start/End: Complemental strand, 40464013 - 40463924
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 1006  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||| |||||| ||||| ||||||| || ||| ||||||||    
T  40464013 taaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttaccc 40463924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 27629770 - 27629674
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||| ||||| ||||||| |||||| ||||||||| |||||| ||||| ||||||| || ||||||||||||| ||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgtttttt 27629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1002
Target Start/End: Original strand, 27889315 - 27889399
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 1002  Q
    |||||||||||  |||  || ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 917 - 1005
Target Start/End: Original strand, 35787267 - 35787355
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    ||||||||||||  ||| || | ||||||||||||||||| |||||||||||| |||||  ||||| |||||||||| |||||||||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttacc 35787355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 938 - 1013
Target Start/End: Complemental strand, 38604642 - 38604567
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||||||||||||||||| |||| ||| || ||||| |||||||||| ||| ||||||||| |||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttt 38604567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 920 - 1014
Target Start/End: Original strand, 11617589 - 11617683
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||  ||| |||||||| ||| ||||||||||||||| |||||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 11617683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 940 - 1014
Target Start/End: Complemental strand, 19266564 - 19266490
Alignment:
Q  940 aagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||||||  |||||  |||| |||||||||| ||| ||||||||| ||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgtttttt 19266490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 923 - 1013
Target Start/End: Original strand, 33871914 - 33872004
Alignment:
Q  923 ggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    |||||| |||| ||||||||||| ||||||| ||||||| ||||||| |||||| ||||| |||||||||| ||| ||||| ||| |||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgttttt 33872004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 919 - 969
Target Start/End: Original strand, 45018923 - 45018973
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaagg 45018973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 19426889 - 19426984
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||| |||||| |||||| |||||||||| ||||| |||||| ||||| |||||||||| |||  |||||||||||||||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaagg-gtcccaccatttggtgtattgtacgcagtcttaccctatttttt 19426984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 42312744 - 42312804
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| | |||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  42312744 aaattacacctgaggtcctttaagtttgaggtttgtaatatattggtcatttaagttattt 42312804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 42798805 - 42798709
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  | | ||||| |||||||||||| |||||||||||||| | |||||| ||||| |||||||||| ||| ||||||| | ||||||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 42798709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 778 - 825
Target Start/End: Complemental strand, 6694809 - 6694762
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  6694809 ggtcctttaagtttgaggtttgtaacatattggtcctttaagttattt 6694762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 8148962 - 8149040
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||| ||| |||||||||| | || ||||||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  8148962 cactaaaactctcgcatacgcaag-tctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttt 8149040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 23231676 - 23231597
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||  ||||||| || ||| ||||||| ||| ||||    
T  23231676 cactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatatttt 23231597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 35334832 - 35334911
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||  ||||||||||  ||  |||||||| ||||||    
T  35334832 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgtttttt 35334911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 42805662 - 42805564
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || ||||||||||  || ||||||||| ||||||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 42805564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 29710379 - 29710425
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  29710379 gtcctttaagtttgatatttgtaacatattggtcctttaagttattt 29710425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 919 - 1014
Target Start/End: Complemental strand, 47716596 - 47716499
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||  ||| ||| |||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 47716499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 982
Target Start/End: Complemental strand, 39124032 - 39123967
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||||||||| | |||| ||| ||||||||| ||||||||||||||||||||| |||||| |||||    
T  39124032 taaaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 39123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 6694516 - 6694576
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||  || |||||||||||| |||||||| | ||||||||||||||||||||    
T  6694516 aaattacatcaggcgttctttaagtttgaggtttgtaataaattggtcttttaagttattt 6694576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 920 - 1012
Target Start/End: Complemental strand, 11741927 - 11741835
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||  ||| ||||| |||||||||||  ||||  ||||||||||  ||||| ||||| |||||||||| ||| ||||||||||||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctatttt 11741835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 935 - 1007
Target Start/End: Complemental strand, 18747606 - 18747534
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||||||||||||||||| | |||||| |||||| || || ||||||| || ||| |||||||||    
T  18747606 cactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccct 18747534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 27280599 - 27280659
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| ||| |||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  27280599 aaattacaccaggggtcctttaagtttgaagtttgttacaaattggtcctttaagttattt 27280659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 938 - 1014
Target Start/End: Original strand, 28078151 - 28078227
Alignment:
Q  938 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||| |||||| ||||| | |||||||| |||||| ||||| |||||||| | ||||||||||||| ||||||    
T  28078151 taaagctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttt 28078227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 782 - 825
Target Start/End: Original strand, 3198273 - 3198316
Alignment:
Q  782 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  3198273 ctttaagtttgaggtttgtaacaaattggtcttttaagttattt 3198316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 939 - 1006
Target Start/End: Complemental strand, 13805216 - 13805149
Alignment:
Q  939 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 1006  Q
    |||||||||||||||||||||||| |||||  |||||| ||||| ||||||||||  || ||||||||    
T  13805216 aaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttaccc 13805149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 1013
Target Start/End: Complemental strand, 19265949 - 19265855
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||| |  ||| ||||||||||||| |||| | ||| |||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  19265949 aaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttt 19265855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 969
Target Start/End: Original strand, 42495865 - 42495912
Alignment:
Q  922 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 969  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaagg 42495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 6222079 - 6222125
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  6222079 gtcctttaagtttaaggtttgtaatatattggtcttttaagttattt 6222125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 27576669 - 27576623
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  27576669 gtcctttaagtttgacgtttgtaacagattggtcctttaagttattt 27576623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 29710658 - 29710612
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  29710658 gtcctttaagtttgacgtttgtaacagattggtcttttaggttattt 29710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 824
Target Start/End: Original strand, 11975506 - 11975551
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttatt 824  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||    
T  11975506 gtcctttaagtttgaggtttgtaacatattgatcctttaagttatt 11975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 24553445 - 24553514
Alignment:
Q  195 ggagatttgctctagtgggcagaatgtttttagcaagtctccacataaaagttttgatcttgtttgggat 264  Q
    ||||||||| ||||||||||| ||| || |||||||| |||||||| ||  ||||||| |||||||||||    
T  24553445 ggagatttgatctagtgggcaaaatattcttagcaagcctccacatgaagtttttgattttgtttgggat 24553514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 920 - 1005
Target Start/End: Complemental strand, 42477005 - 42476920
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    ||||||||| |||| ||||| |||||||||||| |||| | |  |||||| |||||| ||||| |||||||||| ||| |||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttacc 42476920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 935 - 1012
Target Start/End: Original strand, 47077871 - 47077948
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||| |||||||||||| | |||||  ||||||| |||||| ||||| |||||||||| ||||| |||| |||||||    
T  47077871 cactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctatttt 47077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 29710305 - 29710365
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||| | |||||||||||||||| |||||||||| |||  || ||||||||||||    
T  29710305 aaattacatctggggtcctttaagtttgacgtttgtaacagattaatcctttaagttattt 29710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 920 - 1014
Target Start/End: Complemental strand, 29907552 - 29907459
Alignment:
Q  920 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||  ||| ||||||||||||||||||  |||||||||||| || |||||| || ||| |||||||| | ||| |||||| |||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactatttttt 29907459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 31453134 - 31453074
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||| ||| |||||||||||||||||| |||||||||| ||| ||  ||||||||||||    
T  31453134 aaattatatcggaggtcctttaagtttgaggtttgtaacagattagttatttaagttattt 31453074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 966
Target Start/End: Complemental strand, 36602583 - 36602535
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccggga 966  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| ||||    
T  36602583 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 43557611 - 43557512
Alignment:
Q  918 aaaagggcaacatggtacactaaa-gctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||| |||||||||||||||| |||||||| || |||||| |||  || |||||||||| ||| |||||| || ||||||    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttttt 43557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 941 - 1012
Target Start/End: Original strand, 2662958 - 2663028
Alignment:
Q  941 agctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||| |||||||| |  |||| |||||| ||||| |||||||||| ||| ||||||||||||||    
T  2662958 agctcccgcatatgcagggtctgaaaagg-gtcccaccatttggtgtattgtacgcagccttaccctatttt 2663028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 825
Target Start/End: Complemental strand, 30869675 - 30869632
Alignment:
Q  782 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  30869675 ctttaagtttgaggtttgtaacagattggtcctttaagttattt 30869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 982
Target Start/End: Complemental strand, 33500634 - 33500587
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    |||| ||| |||||||||||||||||||||||||| |||||| |||||    
T  33500634 cactgaagatcccgcatacgcagggtccgggaaggggtcccaccattt 33500587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 948 - 1014
Target Start/End: Complemental strand, 1408563 - 1408497
Alignment:
Q  948 gcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||||||||||||| |||||| |||||  |||||||||  || ||||||| | ||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgtttttt 1408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 935 - 1014
Target Start/End: Original strand, 3469191 - 3469272
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||| |||||||  |||||| |||||  ||  ||| |||||||||| |||||| |||||| ||||||    
T  3469191 cactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttttt 3469272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 11975719 - 11975673
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||||||    
T  11975719 gtcctttaagtttgaggtttgtaactgattggtcctttaagttattt 11975673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 776 - 826
Target Start/End: Complemental strand, 41666425 - 41666375
Alignment:
Q  776 gaggtcctttaagtttgatgtttgtaacatattggtcttttaagttatttc 826  Q
    |||||||||||||||||| |||||||||| ||| |||  ||||||||||||    
T  41666425 gaggtcctttaagtttgaggtttgtaacagatttgtcccttaagttatttc 41666375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 782 - 823
Target Start/End: Original strand, 4048264 - 4048305
Alignment:
Q  782 ctttaagtttgatgtttgtaacatattggtcttttaagttat 823  Q
    |||||||| ||| |||||||||||||||||| ||||||||||    
T  4048264 ctttaagtctgaggtttgtaacatattggtcctttaagttat 4048305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 825
Target Start/End: Complemental strand, 6069338 - 6069293
Alignment:
Q  780 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||| |||||||||||||  ||| ||||||||||||    
T  6069338 tcctttaagtttgaggtttgtaacatatatgtcatttaagttattt 6069293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 3e-20; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 919 - 1014
Target Start/End: Original strand, 72867 - 72962
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||| || | | ||||| |||||||||||||| ||||||| | ||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgtttttt 72962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 161402 - 161449
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||||||||| ||||||| ||||| ||||||    
T  161402 ggtcctttaagtttgaggtttgtaacagattggtcctttaacttattt 161449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 161743 - 161697
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||||||||||| | |||| || ||||||||||||    
T  161743 gtcctttaagtttgatgtttgtaatagattgatcctttaagttattt 161697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 917 - 1012
Target Start/End: Original strand, 48632 - 48727
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 48727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 3e-20; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 917 - 1012
Target Start/End: Original strand, 1354755 - 1354850
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  1354755 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 1354850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 1347098 - 1347004
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 1347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 26097294 - 26097200
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| ||||| |||||| |||||||||| ||| ||||||||| ||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgtttt 26097200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 918 - 1007
Target Start/End: Original strand, 29355854 - 29355945
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 1007  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 29355945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 25557859 - 25557765
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| || || |||||| |||||||||| ||| ||||||||| ||||    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgtttt 25557765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1014
Target Start/End: Original strand, 12221913 - 12222012
Alignment:
Q  918 aaaagggcaacatggtacactaaa-gctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 21598798 - 21598738
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  21598798 aaattacatcaggggtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 21598738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 982
Target Start/End: Complemental strand, 24097713 - 24097649
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  24097713 aaaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 916 - 999
Target Start/End: Original strand, 23930124 - 23930207
Alignment:
Q  916 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaac 999  Q
    |||||||||||||  ||| |||||||||||||||||| |||||||||| ||||| |||||| ||| | |||||||||| |||||    
T  23930124 ataaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgcaac 23930207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 918 - 991
Target Start/End: Complemental strand, 13267861 - 13267788
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattg 991  Q
    |||||||||||  ||| |||| ||||||||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 765 - 825
Target Start/End: Complemental strand, 10356614 - 10356554
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||||| |||| |||||||    
T  10356614 aaattacatctgaggtcctttaagtttgacgtttgtaacagattggtcctttaggttattt 10356554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 13273053 - 13273113
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||    
T  13273053 aaattacaccagaggtcctttaagtttgatgtttgtaatagattggtcttttgaattattt 13273113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 981
Target Start/End: Complemental strand, 6808531 - 6808468
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    |||||||||||  ||| ||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 918 - 981
Target Start/End: Complemental strand, 9161260 - 9161197
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||| ||||| |||||| ||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccatt 9161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 917 - 982
Target Start/End: Complemental strand, 12886050 - 12885985
Alignment:
Q  917 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||||  ||| ||||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattt 12885985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 936 - 1013
Target Start/End: Complemental strand, 32579543 - 32579466
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 1013  Q
    ||||||||||||||||| |||||||| ||||||| |||||| ||||| | |||||||| |||  |||||| |||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtattttt 32579466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 19340947 - 19340868
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| |||||||||| |||||| |||||| ||||||||| ||| |||||||||  ||||||||||||| ||||||    
T  19340947 cactaaagcttccgcatacgccgggtccaggaaggggtcccatcattttggtgtattgt-tgcaaccttaccctgtttttt 19340868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 918 - 981
Target Start/End: Complemental strand, 12892145 - 12892082
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 981  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| ||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 12892082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 35225396 - 35225443
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  35225396 ggtcctttaagtttgaggtttgtaacaaattggtcctttaagttattt 35225443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 10356540 - 10356494
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||    
T  10356540 gtcctttaagtttgagatttgtaacagattggtcttttaagttattt 10356494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 21598504 - 21598550
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  21598504 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 21598550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 21598724 - 21598678
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||    
T  21598724 gtcctttaagtttgtggtttgtaacatattggtcctttaagttattt 21598678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 935 - 1007
Target Start/End: Original strand, 7947387 - 7947460
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccct 1007  Q
    ||||||||||||| |||||||| |||||||||||| | |||| || ||| |||||||||| ||| |||||||||    
T  7947387 cactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccct 7947460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 936 - 969
Target Start/End: Original strand, 10734922 - 10734955
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaagg 969  Q
    ||||||||||||||||||||||||||||||||||    
T  10734922 actaaagctcccgcatacgcagggtccgggaagg 10734955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 918 - 967
Target Start/End: Original strand, 32728156 - 32728205
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa 967  Q
    |||||||||||||||| |||||||| ||||||||||| |||||| |||||    
T  32728156 aaaagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaa 32728205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 1014
Target Start/End: Complemental strand, 1941991 - 1941895
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||||| ||| ||| ||| ||||||||||| || | ||| ||| || |||||| ||||  |||||||||| ||| ||||||||| ||||||    
T  1941991 aaaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgtttttt 1941895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 1003
Target Start/End: Original strand, 2166409 - 2166496
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaacctta 1003  Q
    |||||||||||  ||| |||||||||||||| |||   |||||||||||||| |||||| |||  || |||||||||| |||||||||    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 2166496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 1003
Target Start/End: Original strand, 2178042 - 2178129
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaacctta 1003  Q
    |||||||||||  ||| |||||||||||||| |||   |||||||||||||| |||||| |||  || |||||||||| |||||||||    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 2178129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 9982655 - 9982715
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||  || ||||| ||||||    
T  9982655 aaattacatcataggtcttttaagtttgaggtttgtaacatattcatcctttaaattattt 9982715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 936 - 976
Target Start/End: Complemental strand, 11395879 - 11395839
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtccca 976  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  11395879 actaaagctcccgcatacgcaggatccgggaaggggtccca 11395839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 825
Target Start/End: Original strand, 17136829 - 17136889
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||| |||||||||||||| ||||| |||||||| | ||| ||| ||||||||||||    
T  17136829 aaattacaccagaggtcctttaaatttgaggtttgtaatagattagtcctttaagttattt 17136889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 935 - 990
Target Start/End: Original strand, 15866055 - 15866110
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 990  Q
    ||||| || ||||||| |||||||||||||||||| |||||| ||||| |||||||    
T  15866055 cactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 783 - 826
Target Start/End: Complemental strand, 17342715 - 17342672
Alignment:
Q  783 tttaagtttgatgtttgtaacatattggtcttttaagttatttc 826  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||    
T  17342715 tttaagtttgaggtttgtaacatgttggtcctttaagttatttc 17342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 825
Target Start/End: Complemental strand, 17342776 - 17342733
Alignment:
Q  782 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||    
T  17342776 ctttaagtttgaggtttgtaacatgttggtcctttaagttattt 17342733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 825
Target Start/End: Original strand, 21598443 - 21598490
Alignment:
Q  778 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  21598443 ggtcctttaagtttgaggtttataacagattggtcctttaagttattt 21598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 919 - 993
Target Start/End: Original strand, 383760 - 383834
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 993  Q
    ||||||||||  |||  ||| |||||||||||||||||||||| | ||||| ||||||  |||| ||||||||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgta 383834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 936 - 982
Target Start/End: Original strand, 3116146 - 3116192
Alignment:
Q  936 actaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 982  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||    
T  3116146 actaaagctcccgcatacgcaaggtccgagaaggggtcccaccattt 3116192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Original strand, 10356320 - 10356366
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    |||||||||||||||| ||||||||| ||||||  ||||||||||||    
T  10356320 gtcctttaagtttgatatttgtaacagattggttctttaagttattt 10356366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 35050859 - 35050813
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  35050859 gtcctttaagtttaaagtttgtaacagattggtcctttaagttattt 35050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 822
Target Start/End: Original strand, 3848533 - 3848590
Alignment:
Q  765 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtta 822  Q
    |||||||||||  |||||||||||||||| |||||||| | || |||| |||||||||    
T  3848533 aaattacatcattggtcctttaagtttgaggtttgtaaaaaataggtcatttaagtta 3848590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 935 - 1012
Target Start/End: Original strand, 23240840 - 23240917
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    ||||||||||||||||||||||  ||||  ||||| |||||| || || || ||||||| |||| |||||||| ||||    
T  23240840 cactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgtttt 23240917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 781 - 826
Target Start/End: Complemental strand, 35050802 - 35050757
Alignment:
Q  781 cctttaagtttgatgtttgtaacatattggtcttttaagttatttc 826  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||||    
T  35050802 cctttaagtttaaggtttgtaacagattggtcctttaagttatttc 35050757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 919 - 1004
Target Start/End: Complemental strand, 11264 - 11179
Alignment:
Q  919 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 1004  Q
    |||||||||| |||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttac 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 10929 - 10850
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| | ||| || |||||| ||||||    
T  10929 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgtttttt 10850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 918 - 1012
Target Start/End: Complemental strand, 30713 - 30619
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 1012  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| || |||||| ||||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgtttt 30619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 918 - 1006
Target Start/End: Original strand, 24132 - 24220
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 1006  Q
    ||||||||||   ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||    
T  24132 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 918 - 1005
Target Start/End: Original strand, 13023 - 13110
Alignment:
Q  918 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 1005  Q
    |||||||||||  ||| ||||||||| ||||||||||||||||| ||||||| |||||| ||||  |||||||||| ||| |||||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttacc 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 3663 - 3584
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||  ||||||| || ||| ||||||| ||| ||||    
T  3663 cactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatatttt 3584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 825
Target Start/End: Complemental strand, 1273 - 1227
Alignment:
Q  779 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 825  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  1273 gtcctttaagtttgacgtttgtaacagattggtcctttaagttattt 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 935 - 1014
Target Start/End: Complemental strand, 59098 - 59017
Alignment:
Q  935 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 1014  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||  ||| |||||||||| |||  |||||||| ||||||    
T  59098 cactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttt 59017  T

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