View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19757_low_117 (Length: 217)
Name: NF19757_low_117
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_low_117 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 19643982 - 19643830
Alignment:
| Q |
47 |
cttgaatcccgtaaaaggaccacaaaagatggcgacatgcgcagacaaacaatgcttcaaaaagcgtgactcctaagcacgatcatcatcgatgattcca |
146 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19643982 |
cttgaatcccgtaaaaggaccacaaaagatggccacatgcgcagacaaacaatgcttcaaaaagcgtgactcataagcacgatcatcatcgatgattcca |
19643883 |
T |
|
| Q |
147 |
ctaggatcctttgaacgacgaaaccatgatatcgactttaggacgcatgttag |
199 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
19643882 |
ctaggatccttcgaacgacgaaaccatgataccgactttaggacatatgttag |
19643830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University