View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19757_low_118 (Length: 214)
Name: NF19757_low_118
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_low_118 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 51190773 - 51190954
Alignment:
| Q |
18 |
agtttgtcctagattgttttgaagattaagagagtttgggtttagaagatgaataggagtaacacgacagaatttgacatatacaagtaagataaaagtt |
117 |
Q |
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| T |
51190773 |
agtttgtcctagattgttttgaagattaagagagtttgggtttagaagatgaataggagtaacacgacagaatttgacatatacaagtaagataaaagtt |
51190872 |
T |
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| Q |
118 |
aggaaaaacattatggaaagtactattattacaacacctttacttggagtaacaccttttggtaactctgccatgttctgtg |
199 |
Q |
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| T |
51190873 |
aggaaaaacattatggaaagtactattattacaacacctttacttggagtaacaccttttggtaactctgccatgttctgtg |
51190954 |
T |
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