View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19757_low_62 (Length: 349)
Name: NF19757_low_62
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_low_62 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 17 - 349
Target Start/End: Original strand, 32597794 - 32598116
Alignment:
| Q |
17 |
gtttatcgccataaaaccgtagagatgttattagggacatccgatgaaattggaactatttaaagaaaaccgtagagatttcttgttattttccacacta |
116 |
Q |
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| T |
32597794 |
gtttatcgccataaaaccgtagagatgttattagggacatccgatgaaattggaactatttaaagaaaaccgtagagatttcttgttattttccacacta |
32597893 |
T |
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| Q |
117 |
ataattaagacaatatatatgagataagatcttaacttaggtttggaacattttgttcctcacacttctgttcaacatgatcaagagctgttgtatcaac |
216 |
Q |
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| T |
32597894 |
ataattaagacaatata----------gatcttaacttaggtttggaacattttgttccccacacttctgttcaacatgatcaagagctgttgtatcaac |
32597983 |
T |
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| Q |
217 |
atgtacgtgtggtttggtgccgaatggccacacttctgttcaatgattgaagctaaagacatatatttggtgctatgttttttgaatgtaattatgtaca |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32597984 |
atgtacgtgtggtttggtgccgaatggccacacttctgttcaatgattgaaactaaagacatatatttggtgctatgttttttgaatgtaattatgtaca |
32598083 |
T |
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| Q |
317 |
tcttaacaatattctcaagtatatagttagaag |
349 |
Q |
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| T |
32598084 |
tcttaacaatattctcaagtatatagttagaag |
32598116 |
T |
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