View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19757_low_90 (Length: 277)
Name: NF19757_low_90
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_low_90 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 40439324 - 40439570
Alignment:
| Q |
15 |
aagaacgaaggcagtggttccgtttgggaggaggaagggggagcacgacggaggcgtttgaggatacggattggtgggtcgggttgagattctggatcgg |
114 |
Q |
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| T |
40439324 |
aagaacgaaggcagtgattccgtttgggaggaggaagggggagcacgacggagacgtttgaggatacggattggtgggtcgggttgagattctggatcgg |
40439423 |
T |
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| Q |
115 |
aatcggggacttcttgtgggaccgggtcgtggttgggggaggtagatggagaaggtggtggtgtatcgtcaagatcgagacctagggagaatgatggagc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40439424 |
aatcggggacttcttgtgggaccgggtcgtggttgggggaggtagatggagaaggtggtggtgtatcgtcaagatcgagacctagggagaatgatggagc |
40439523 |
T |
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| Q |
215 |
ttcaaattcagccatggaaattgaaatccaaggattgagatcttgtt |
261 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
40439524 |
ttcaaattcagccatggaaattgaaatccaaggattgtgatcttgtt |
40439570 |
T |
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