View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19757_low_94 (Length: 267)
Name: NF19757_low_94
Description: NF19757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19757_low_94 |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 48718169 - 48718419
Alignment:
| Q |
1 |
gatgtttacatcaaaattcattactgtggagtctgccattctgatcttcaccaaatcaaaaatgatcttggcatgtccaattatcctatggttcccgggt |
100 |
Q |
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| T |
48718169 |
gatgtttacatcaaaattcattactgtggagtctgccattctgatcttcaccaaatcaaaaatgatcttggcatgtccaattatcctatggttcccgggt |
48718268 |
T |
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| Q |
101 |
atgttaacttttaaactctgatctatcgaatatgtgtctggtgtctgatacgacgtacacatataattatgccatctatcaaattatcacctgcatgtgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48718269 |
atgttaacttttaaactctgatctatcgaatatgtgtctggtgtctgatactacgtacacatataattatgccatctatcaaattatcacctgcatgtgt |
48718368 |
T |
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| Q |
201 |
ctggtgtttgttgatatgtccgtgtttcgattaattttaaggttcttagtg |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48718369 |
ctggtgtttgttgatatgtccgtgtttcgattaattttaaggttcttagtg |
48718419 |
T |
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