View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19759_low_12 (Length: 291)

Name: NF19759_low_12
Description: NF19759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19759_low_12
NF19759_low_12
[»] chr8 (62 HSPs)
chr8 (1-291)||(21395781-21396071)
chr8 (1-291)||(21790274-21790564)
chr8 (1-288)||(21389254-21389541)
chr8 (1-171)||(21778697-21778867)
chr8 (1-176)||(31971287-31971463)
chr8 (1-176)||(16199559-16199735)
chr8 (1-176)||(45130911-45131087)
chr8 (1-174)||(21918915-21919091)
chr8 (1-176)||(18879150-18879322)
chr8 (1-176)||(20536238-20536416)
chr8 (162-291)||(17353736-17353865)
chr8 (1-176)||(22626766-22626943)
chr8 (1-176)||(18818322-18818500)
chr8 (1-176)||(21923841-21924019)
chr8 (162-291)||(19899286-19899415)
chr8 (1-176)||(28648957-28649135)
chr8 (1-176)||(7372808-7372978)
chr8 (1-176)||(23406409-23406589)
chr8 (1-176)||(22875095-22875273)
chr8 (1-176)||(23648583-23648761)
chr8 (162-291)||(24755912-24756041)
chr8 (1-159)||(16092272-16092433)
chr8 (119-291)||(16184877-16185048)
chr8 (1-67)||(17140946-17141014)
chr8 (162-291)||(19983284-19983413)
chr8 (1-176)||(6759288-6759464)
chr8 (181-291)||(19976655-19976765)
chr8 (1-67)||(5866297-5866365)
chr8 (1-87)||(6520398-6520486)
chr8 (162-291)||(21161857-21161986)
chr8 (61-291)||(23776633-23776864)
chr8 (1-66)||(21491025-21491092)
chr8 (1-88)||(21285627-21285716)
chr8 (1-43)||(23760893-23760935)
chr8 (107-176)||(25363053-25363123)
chr8 (1-43)||(38855300-38855342)
chr8 (1-43)||(983455-983497)
chr8 (1-67)||(13508108-13508176)
chr8 (162-291)||(20465838-20465967)
chr8 (162-291)||(21168520-21168649)
chr8 (1-120)||(14409459-14409579)
chr8 (1-120)||(16413331-16413451)
chr8 (162-289)||(377469-377596)
chr8 (1-44)||(19154935-19154978)
chr8 (1-88)||(20498592-20498681)
chr8 (1-43)||(26355747-26355789)
chr8 (1-67)||(17612133-17612201)
chr8 (1-69)||(20046261-20046330)
chr8 (1-42)||(24353050-24353091)
chr8 (1-42)||(37116377-37116418)
chr8 (1-120)||(1484429-1484549)
chr8 (1-120)||(5853307-5853427)
chr8 (1-120)||(20403254-20403374)
chr8 (1-120)||(22001780-22001900)
chr8 (1-90)||(18678102-18678193)
chr8 (1-90)||(32121762-32121853)
chr8 (1-67)||(13597640-13597708)
chr8 (1-69)||(15203297-15203366)
chr8 (1-42)||(17267044-17267085)
chr8 (1-42)||(17439557-17439598)
chr8 (162-219)||(17926578-17926635)
chr8 (1-120)||(41598215-41598335)
[»] chr2 (53 HSPs)
chr2 (1-176)||(20309138-20309313)
chr2 (1-176)||(38029-38205)
chr2 (57-291)||(40622007-40622244)
chr2 (1-189)||(23285895-23286082)
chr2 (1-176)||(22731147-22731325)
chr2 (1-176)||(298727-298906)
chr2 (1-189)||(23654286-23654477)
chr2 (1-176)||(22738093-22738270)
chr2 (163-291)||(23038227-23038355)
chr2 (1-171)||(23060543-23060716)
chr2 (1-176)||(23076472-23076650)
chr2 (106-291)||(22740759-22740945)
chr2 (1-232)||(23103254-23103486)
chr2 (1-291)||(22798925-22799217)
chr2 (44-291)||(23019505-23019752)
chr2 (106-291)||(22758514-22758700)
chr2 (1-176)||(22337145-22337323)
chr2 (9-176)||(23660061-23660230)
chr2 (1-88)||(7735-7824)
chr2 (5-120)||(23708589-23708706)
chr2 (1-87)||(7679615-7679702)
chr2 (1-120)||(22105439-22105560)
chr2 (1-43)||(25175880-25175922)
chr2 (167-291)||(45677954-45678078)
chr2 (1-43)||(28406006-28406048)
chr2 (1-67)||(19671860-19671928)
chr2 (1-67)||(23071972-23072040)
chr2 (1-120)||(21155075-21155195)
chr2 (227-291)||(23101029-23101093)
chr2 (1-120)||(26505406-26505526)
chr2 (1-120)||(26507884-26508004)
chr2 (1-44)||(23207307-23207350)
chr2 (1-120)||(18808970-18809090)
chr2 (1-120)||(23130889-23131009)
chr2 (1-120)||(23133356-23133476)
chr2 (1-120)||(23135617-23135737)
chr2 (1-120)||(23709547-23709667)
chr2 (1-120)||(23712028-23712148)
chr2 (1-120)||(24367801-24367921)
chr2 (1-120)||(32214936-32215056)
chr2 (1-120)||(34402537-34402657)
chr2 (1-120)||(39682340-39682460)
chr2 (1-47)||(8946687-8946732)
chr2 (1-43)||(18786952-18786994)
chr2 (1-43)||(22134256-22134297)
chr2 (1-70)||(32451948-32452020)
chr2 (1-126)||(45029863-45029989)
chr2 (1-69)||(571424-571493)
chr2 (1-69)||(6726022-6726091)
chr2 (1-42)||(20520243-20520284)
chr2 (1-42)||(23004778-23004819)
chr2 (162-219)||(25963588-25963645)
chr2 (1-120)||(32039513-32039633)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-176)||(1319-1494)
scaffold0106 (1-176)||(7296-7471)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-176)||(16312-16487)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-176)||(51612-51787)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-176)||(965-1140)
[»] chr4 (58 HSPs)
chr4 (1-176)||(17046517-17046692)
chr4 (1-176)||(14053215-14053392)
chr4 (1-189)||(12902787-12902978)
chr4 (1-189)||(7088907-7089098)
chr4 (57-291)||(15121602-15121834)
chr4 (1-176)||(22636465-22636642)
chr4 (1-176)||(44052859-44053037)
chr4 (1-176)||(23374272-23374450)
chr4 (1-176)||(16270149-16270326)
chr4 (1-152)||(7798804-7798958)
chr4 (162-291)||(13569703-13569832)
chr4 (1-176)||(16377436-16377612)
chr4 (162-291)||(23843669-23843798)
chr4 (109-291)||(15093911-15094093)
chr4 (1-176)||(14038678-14038856)
chr4 (162-290)||(44675823-44675951)
chr4 (1-176)||(7893733-7893908)
chr4 (1-176)||(16239883-16240060)
chr4 (162-291)||(12570212-12570341)
chr4 (24-89)||(43256161-43256227)
chr4 (1-90)||(52873367-52873458)
chr4 (1-140)||(6899921-6900062)
chr4 (1-88)||(13853-13942)
chr4 (1-67)||(15551847-15551915)
chr4 (97-176)||(3096772-3096851)
chr4 (1-43)||(12288259-12288301)
chr4 (1-43)||(12774037-12774079)
chr4 (1-43)||(52243245-52243287)
chr4 (206-291)||(15124953-15125038)
chr4 (1-88)||(14280343-14280431)
chr4 (1-52)||(3096323-3096373)
chr4 (1-120)||(22353863-22353984)
chr4 (107-172)||(17047989-17048055)
chr4 (1-43)||(39706337-39706379)
chr4 (6-43)||(8846391-8846428)
chr4 (1-120)||(18215289-18215409)
chr4 (1-120)||(44928894-44929015)
chr4 (1-88)||(54798756-54798845)
chr4 (1-36)||(43198611-43198646)
chr4 (1-70)||(6190492-6190564)
chr4 (1-88)||(8574871-8574958)
chr4 (9-67)||(16596686-16596746)
chr4 (1-69)||(19618238-19618307)
chr4 (1-120)||(12322-12442)
chr4 (1-120)||(15118367-15118487)
chr4 (163-291)||(16487877-16488005)
chr4 (1-120)||(23803280-23803400)
chr4 (1-120)||(44615315-44615435)
chr4 (1-120)||(52312537-52312657)
chr4 (1-44)||(46640504-46640547)
chr4 (1-69)||(15355391-15355460)
chr4 (1-69)||(44773153-44773222)
chr4 (1-69)||(51463934-51464003)
chr4 (1-42)||(53082202-53082243)
chr4 (1-120)||(1837524-1837644)
chr4 (1-120)||(3515034-3515154)
chr4 (1-120)||(18239434-18239554)
chr4 (1-120)||(19242726-19242846)
[»] chr7 (65 HSPs)
chr7 (1-176)||(27847746-27847921)
chr7 (4-176)||(40443424-40443597)
chr7 (71-291)||(17137862-17138081)
chr7 (71-291)||(12187115-12187334)
chr7 (1-176)||(12698861-12699040)
chr7 (1-176)||(9509219-9509397)
chr7 (1-176)||(10589069-10589246)
chr7 (9-189)||(26212034-26212217)
chr7 (1-176)||(18456326-18456503)
chr7 (106-291)||(18154635-18154821)
chr7 (1-176)||(16386160-16386339)
chr7 (162-291)||(9703458-9703587)
chr7 (119-286)||(24054618-24054784)
chr7 (1-159)||(38227511-38227671)
chr7 (1-159)||(3564294-3564455)
chr7 (181-291)||(11880463-11880573)
chr7 (106-289)||(19649285-19649469)
chr7 (24-89)||(2530139-2530205)
chr7 (1-67)||(28505321-28505389)
chr7 (1-67)||(34200816-34200884)
chr7 (1-120)||(13647355-13647476)
chr7 (1-120)||(16213711-16213831)
chr7 (1-43)||(67775-67817)
chr7 (3-88)||(48273421-48273508)
chr7 (1-67)||(16495432-16495500)
chr7 (1-90)||(16219717-16219808)
chr7 (1-120)||(24704715-24704832)
chr7 (1-43)||(811180-811222)
chr7 (1-88)||(2280121-2280210)
chr7 (3-88)||(16056360-16056446)
chr7 (1-43)||(18005676-18005718)
chr7 (1-43)||(44014208-44014250)
chr7 (166-291)||(12321541-12321666)
chr7 (1-120)||(24275198-24275318)
chr7 (1-120)||(24702265-24702385)
chr7 (1-43)||(12255842-12255884)
chr7 (1-47)||(12901353-12901399)
chr7 (1-43)||(47831837-47831879)
chr7 (1-67)||(10063841-10063909)
chr7 (1-42)||(14036284-14036325)
chr7 (1-42)||(14346314-14346355)
chr7 (2-39)||(22072944-22072981)
chr7 (1-69)||(44116536-44116605)
chr7 (1-120)||(456348-456468)
chr7 (1-120)||(11393302-11393422)
chr7 (1-120)||(11972523-11972643)
chr7 (1-66)||(11996051-11996118)
chr7 (1-120)||(14949137-14949257)
chr7 (1-120)||(15376728-15376848)
chr7 (1-120)||(16232547-16232667)
chr7 (1-120)||(18430739-18430859)
chr7 (1-120)||(18640299-18640419)
chr7 (1-120)||(20385138-20385258)
chr7 (1-120)||(21189610-21189730)
chr7 (1-120)||(27216887-27217007)
chr7 (1-120)||(32125518-32125638)
chr7 (1-120)||(41522944-41523064)
chr7 (1-120)||(41525406-41525526)
chr7 (1-69)||(17061981-17062050)
chr7 (1-44)||(48991210-48991253)
chr7 (254-291)||(10508881-10508918)
chr7 (1-42)||(14044776-14044817)
chr7 (1-42)||(14354806-14354847)
chr7 (1-67)||(15754910-15754978)
chr7 (1-69)||(16410086-16410155)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-176)||(32097-32272)
[»] chr6 (61 HSPs)
chr6 (1-176)||(16920546-16920721)
chr6 (1-176)||(22831533-22831710)
chr6 (1-177)||(11185535-11185711)
chr6 (1-143)||(35245616-35245758)
chr6 (1-176)||(20360873-20361051)
chr6 (1-176)||(20638196-20638374)
chr6 (1-176)||(29060570-29060748)
chr6 (162-291)||(19863171-19863300)
chr6 (162-291)||(19873313-19873442)
chr6 (106-291)||(25641982-25642168)
chr6 (1-122)||(16496274-16496397)
chr6 (119-291)||(22438951-22439122)
chr6 (162-291)||(22432443-22432572)
chr6 (1-176)||(22780140-22780318)
chr6 (1-172)||(17287713-17287887)
chr6 (162-291)||(22334690-22334819)
chr6 (1-176)||(19303454-19303631)
chr6 (1-176)||(20593803-20593981)
chr6 (1-176)||(18409740-18409918)
chr6 (1-176)||(25629268-25629446)
chr6 (1-129)||(20076730-20076857)
chr6 (24-143)||(27415887-27416008)
chr6 (162-290)||(15894229-15894357)
chr6 (1-116)||(20109168-20109285)
chr6 (1-43)||(27333267-27333309)
chr6 (1-43)||(27394007-27394049)
chr6 (162-291)||(21739821-21739950)
chr6 (1-116)||(1595576-1595692)
chr6 (1-88)||(25644350-25644440)
chr6 (193-291)||(16924678-16924776)
chr6 (1-43)||(9098563-9098605)
chr6 (162-291)||(18907299-18907428)
chr6 (1-69)||(25656656-25656725)
chr6 (1-67)||(28496494-28496562)
chr6 (1-67)||(29808905-29808973)
chr6 (1-120)||(2291195-2291315)
chr6 (3-88)||(23019438-23019525)
chr6 (228-291)||(16965109-16965172)
chr6 (1-84)||(4185827-4185912)
chr6 (1-43)||(19652225-19652267)
chr6 (193-291)||(31164646-31164744)
chr6 (1-69)||(22782254-22782323)
chr6 (1-69)||(25688529-25688598)
chr6 (1-120)||(1540926-1541046)
chr6 (1-120)||(12742344-12742464)
chr6 (44-291)||(15041349-15041596)
chr6 (1-120)||(18334607-18334727)
chr6 (1-120)||(19005073-19005193)
chr6 (1-120)||(19858934-19859054)
chr6 (1-120)||(24422574-24422694)
chr6 (1-120)||(25754836-25754956)
chr6 (1-120)||(30676725-30676845)
chr6 (1-120)||(33861821-33861941)
chr6 (1-120)||(33864305-33864425)
chr6 (1-36)||(19668401-19668436)
chr6 (1-67)||(1561333-1561401)
chr6 (1-69)||(16448593-16448662)
chr6 (162-291)||(21834689-21834818)
chr6 (1-42)||(23076760-23076801)
chr6 (1-42)||(35008178-35008219)
chr6 (1-120)||(34963400-34963520)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-176)||(10339-10514)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-176)||(47025-47200)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-176)||(13527-13703)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-176)||(15378-15554)
scaffold0114 (71-291)||(7391-7610)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-290)||(174796-175086)
scaffold0021 (59-176)||(124675-124793)
scaffold0021 (1-41)||(121796-121835)
[»] chr1 (49 HSPs)
chr1 (1-176)||(38801304-38801479)
chr1 (1-189)||(27250629-27250820)
chr1 (106-291)||(21714684-21714870)
chr1 (1-291)||(22468495-22468787)
chr1 (1-189)||(21026710-21026901)
chr1 (1-176)||(50210126-50210304)
chr1 (46-176)||(22354485-22354616)
chr1 (162-290)||(20091273-20091401)
chr1 (107-274)||(48603652-48603820)
chr1 (162-291)||(42865010-42865139)
chr1 (1-172)||(22532299-22532473)
chr1 (44-291)||(21787841-21788088)
chr1 (1-176)||(34509810-34509988)
chr1 (1-176)||(20135217-20135395)
chr1 (24-143)||(33797573-33797694)
chr1 (162-291)||(22831177-22831306)
chr1 (1-88)||(21896258-21896347)
chr1 (162-291)||(6152046-6152175)
chr1 (1-67)||(14295574-14295642)
chr1 (1-67)||(20918634-20918702)
chr1 (1-69)||(21754075-21754145)
chr1 (1-43)||(16758679-16758721)
chr1 (1-88)||(21861572-21861661)
chr1 (1-43)||(22921918-22921960)
chr1 (1-43)||(33681037-33681079)
chr1 (1-65)||(45574912-45574978)
chr1 (163-291)||(21022830-21022958)
chr1 (1-120)||(433039-433157)
chr1 (1-69)||(35261099-35261169)
chr1 (1-47)||(20847200-20847245)
chr1 (1-88)||(22237657-22237746)
chr1 (1-43)||(52928019-52928061)
chr1 (162-291)||(18181920-18182049)
chr1 (1-69)||(21840794-21840863)
chr1 (1-69)||(22123133-22123203)
chr1 (1-42)||(50614167-50614208)
chr1 (1-42)||(50621995-50622036)
chr1 (1-120)||(13988893-13989013)
chr1 (1-120)||(21475102-21475222)
chr1 (1-120)||(21923306-21923426)
chr1 (1-120)||(23593750-23593870)
chr1 (1-120)||(29776715-29776835)
chr1 (1-40)||(16368338-16368377)
chr1 (1-40)||(20454606-20454644)
chr1 (1-66)||(15860078-15860144)
chr1 (1-43)||(20248309-20248351)
chr1 (80-176)||(22356087-22356185)
chr1 (80-176)||(22357773-22357871)
chr1 (1-42)||(26064968-26065009)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-176)||(5044-5219)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-291)||(26854-27143)
[»] chr5 (50 HSPs)
chr5 (1-291)||(37723933-37724224)
chr5 (71-291)||(22032417-22032636)
chr5 (1-176)||(21292883-21293060)
chr5 (1-176)||(23390409-23390587)
chr5 (71-288)||(18769806-18770022)
chr5 (1-171)||(8286760-8286934)
chr5 (1-189)||(22075049-22075240)
chr5 (71-291)||(23572180-23572399)
chr5 (162-291)||(26704257-26704386)
chr5 (162-291)||(26973990-26974119)
chr5 (1-176)||(25421562-25421740)
chr5 (1-176)||(25431424-25431602)
chr5 (162-291)||(23201559-23201689)
chr5 (1-291)||(21873280-21873569)
chr5 (1-176)||(24493599-24493776)
chr5 (1-122)||(21729032-21729155)
chr5 (1-122)||(21808357-21808480)
chr5 (2-176)||(9077983-9078160)
chr5 (163-291)||(14079340-14079468)
chr5 (1-176)||(24529250-24529428)
chr5 (162-290)||(23501145-23501273)
chr5 (1-176)||(13025341-13025518)
chr5 (1-176)||(13095525-13095702)
chr5 (1-169)||(1096497-1096668)
chr5 (24-143)||(18356367-18356488)
chr5 (1-69)||(21997555-21997625)
chr5 (1-87)||(20026942-20027032)
chr5 (1-87)||(21329500-21329588)
chr5 (1-43)||(19660884-19660926)
chr5 (24-89)||(20910800-20910866)
chr5 (1-88)||(22144079-22144168)
chr5 (1-43)||(22959581-22959623)
chr5 (182-291)||(23512318-23512427)
chr5 (1-67)||(36314607-36314675)
chr5 (1-86)||(21565572-21565659)
chr5 (1-69)||(26012056-26012126)
chr5 (4-90)||(18418613-18418699)
chr5 (106-189)||(22107273-22107357)
chr5 (1-120)||(29329961-29330081)
chr5 (1-43)||(21502205-21502247)
chr5 (1-88)||(22412214-22412302)
chr5 (1-69)||(11581265-11581334)
chr5 (1-69)||(20902075-20902144)
chr5 (1-120)||(264783-264903)
chr5 (1-120)||(10732955-10733075)
chr5 (1-120)||(20909039-20909159)
chr5 (1-120)||(39363411-39363531)
chr5 (1-69)||(18319100-18319169)
chr5 (1-69)||(39245163-39245232)
chr5 (1-120)||(42245380-42245500)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-176)||(4742-4919)
scaffold0358 (46-176)||(13-143)
[»] chr3 (73 HSPs)
chr3 (1-176)||(20698349-20698526)
chr3 (1-176)||(13442304-13442482)
chr3 (1-176)||(17487886-17488064)
chr3 (1-291)||(856166-856455)
chr3 (1-176)||(12399239-12399417)
chr3 (1-176)||(17499368-17499546)
chr3 (9-176)||(14576746-14576915)
chr3 (1-176)||(14972884-14973062)
chr3 (162-291)||(17524951-17525080)
chr3 (1-176)||(26686917-26687095)
chr3 (1-176)||(43840962-43841140)
chr3 (1-175)||(23083275-23083452)
chr3 (107-223)||(14179570-14179687)
chr3 (119-291)||(23408581-23408752)
chr3 (1-176)||(24153122-24153299)
chr3 (1-176)||(18438564-18438742)
chr3 (191-291)||(15877627-15877727)
chr3 (1-176)||(14572619-14572796)
chr3 (1-176)||(11424676-11424850)
chr3 (1-176)||(42386440-42386619)
chr3 (162-291)||(23077277-23077406)
chr3 (163-291)||(15051707-15051835)
chr3 (1-175)||(25476299-25476476)
chr3 (1-43)||(12174308-12174350)
chr3 (1-88)||(15470954-15471043)
chr3 (1-43)||(32307707-32307749)
chr3 (1-43)||(49668125-49668167)
chr3 (1-67)||(13210350-13210418)
chr3 (1-87)||(14234517-14234605)
chr3 (1-176)||(40213634-40213811)
chr3 (163-291)||(16909941-16910069)
chr3 (1-43)||(9512950-9512992)
chr3 (1-43)||(9520925-9520967)
chr3 (1-88)||(27165277-27165366)
chr3 (1-43)||(52523778-52523820)
chr3 (163-291)||(14878304-14878433)
chr3 (1-67)||(24340746-24340814)
chr3 (1-120)||(9707622-9707742)
chr3 (163-291)||(15060483-15060611)
chr3 (1-120)||(29172598-29172718)
chr3 (1-120)||(50242849-50242969)
chr3 (1-120)||(53070668-53070788)
chr3 (1-36)||(28194720-28194755)
chr3 (1-44)||(37251216-37251259)
chr3 (9-69)||(53301572-53301634)
chr3 (1-39)||(16097358-16097396)
chr3 (1-43)||(16103810-16103852)
chr3 (1-88)||(36166625-36166712)
chr3 (1-90)||(46822295-46822386)
chr3 (162-219)||(11862981-11863038)
chr3 (1-89)||(12511087-12511177)
chr3 (1-69)||(17672653-17672722)
chr3 (1-42)||(22110402-22110443)
chr3 (1-67)||(23274717-23274785)
chr3 (1-69)||(43550544-43550614)
chr3 (1-42)||(43925988-43926029)
chr3 (1-120)||(7781362-7781482)
chr3 (1-120)||(8899121-8899241)
chr3 (1-120)||(12567587-12567707)
chr3 (1-120)||(13544052-13544172)
chr3 (1-120)||(17446670-17446790)
chr3 (1-120)||(17463205-17463325)
chr3 (1-120)||(28848626-28848746)
chr3 (1-120)||(34159353-34159473)
chr3 (1-120)||(38961906-38962026)
chr3 (1-120)||(45606922-45607042)
chr3 (1-120)||(55476518-55476638)
chr3 (1-40)||(606378-606417)
chr3 (107-176)||(16796685-16796755)
chr3 (1-88)||(21618476-21618563)
chr3 (1-86)||(55500969-55501055)
chr3 (1-69)||(6469200-6469269)
chr3 (1-120)||(16454296-16454416)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-176)||(13241-13419)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-189)||(949-1139)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-176)||(1881-2059)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-189)||(167879-168069)
scaffold0011 (1-176)||(51943-52121)
[»] scaffold1124 (1 HSPs)
scaffold1124 (71-291)||(1977-2196)
[»] scaffold0210 (2 HSPs)
scaffold0210 (71-291)||(21605-21824)
scaffold0210 (71-291)||(29497-29716)
[»] scaffold0131 (1 HSPs)
scaffold0131 (106-291)||(36592-36778)
[»] scaffold0029 (2 HSPs)
scaffold0029 (71-291)||(12859-13078)
scaffold0029 (1-120)||(11315-11435)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-176)||(4879-5057)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-176)||(3500-3678)
scaffold0292 (1-169)||(373-543)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-176)||(24214-24394)
scaffold0042 (162-291)||(34709-34838)
[»] scaffold0139 (2 HSPs)
scaffold0139 (106-291)||(20117-20303)
scaffold0139 (1-44)||(38346-38389)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-171)||(6039-6215)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-176)||(1982-2160)
[»] scaffold0297 (1 HSPs)
scaffold0297 (162-291)||(15468-15597)
[»] scaffold0088 (1 HSPs)
scaffold0088 (7-189)||(20946-21132)
[»] scaffold0004 (1 HSPs)
scaffold0004 (106-291)||(69930-70116)
[»] scaffold0101 (1 HSPs)
scaffold0101 (162-291)||(8756-8885)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-172)||(3068-3241)
[»] scaffold0309 (1 HSPs)
scaffold0309 (31-184)||(6669-6826)
[»] scaffold0145 (3 HSPs)
scaffold0145 (1-176)||(32972-33149)
scaffold0145 (1-176)||(38791-38968)
scaffold0145 (1-69)||(9776-9845)
[»] scaffold0261 (2 HSPs)
scaffold0261 (181-291)||(1550-1660)
scaffold0261 (4-67)||(15694-15759)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-176)||(8446-8620)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-184)||(22913-23098)
[»] scaffold0174 (1 HSPs)
scaffold0174 (162-291)||(18252-18381)
[»] scaffold0043 (1 HSPs)
scaffold0043 (162-291)||(18431-18560)
[»] scaffold0023 (8 HSPs)
scaffold0023 (44-286)||(38283-38525)
scaffold0023 (45-291)||(23466-23711)
scaffold0023 (1-88)||(100404-100493)
scaffold0023 (1-43)||(119905-119947)
scaffold0023 (1-42)||(40224-40265)
scaffold0023 (1-43)||(101529-101571)
scaffold0023 (1-120)||(17455-17575)
scaffold0023 (1-120)||(94438-94558)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-176)||(339863-340038)
scaffold0003 (24-143)||(71353-71474)
scaffold0003 (1-120)||(158465-158585)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-176)||(39507-39684)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-176)||(75128-75305)
[»] scaffold0046 (3 HSPs)
scaffold0046 (1-107)||(28444-28552)
scaffold0046 (1-67)||(11322-11390)
scaffold0046 (1-67)||(2027-2095)
[»] scaffold0175 (2 HSPs)
scaffold0175 (21-189)||(13141-13313)
scaffold0175 (1-67)||(34153-34221)
[»] scaffold0031 (3 HSPs)
scaffold0031 (181-291)||(65592-65702)
scaffold0031 (1-120)||(20394-20513)
scaffold0031 (46-116)||(128827-128897)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-172)||(3103-3277)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-176)||(25978-26156)
scaffold0122 (1-88)||(44709-44798)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-146)||(32901-33047)
scaffold0120 (1-146)||(45958-46104)
scaffold0120 (1-52)||(16143-16193)
[»] scaffold0102 (2 HSPs)
scaffold0102 (162-291)||(48259-48388)
scaffold0102 (1-43)||(19294-19336)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-176)||(25926-26103)
scaffold0026 (1-176)||(39888-40065)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-86)||(11447-11534)
[»] scaffold0555 (2 HSPs)
scaffold0555 (162-291)||(773-902)
scaffold0555 (3-88)||(10543-10630)
[»] scaffold0149 (3 HSPs)
scaffold0149 (162-291)||(3933-4061)
scaffold0149 (162-291)||(8364-8492)
scaffold0149 (1-69)||(29959-30028)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-176)||(17128-17308)
[»] scaffold1895 (1 HSPs)
scaffold1895 (162-286)||(1031-1155)
[»] scaffold0096 (1 HSPs)
scaffold0096 (109-291)||(16148-16330)
[»] scaffold0080 (3 HSPs)
scaffold0080 (1-176)||(39943-40120)
scaffold0080 (162-291)||(18455-18584)
scaffold0080 (1-44)||(19933-19976)
[»] scaffold0081 (3 HSPs)
scaffold0081 (162-291)||(14863-14992)
scaffold0081 (162-291)||(23878-24007)
scaffold0081 (162-291)||(39302-39431)
[»] scaffold0228 (3 HSPs)
scaffold0228 (8-176)||(4544-4715)
scaffold0228 (8-176)||(12126-12297)
scaffold0228 (8-176)||(22078-22249)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-173)||(16516-16691)
[»] scaffold0671 (1 HSPs)
scaffold0671 (162-290)||(6294-6422)
[»] scaffold0198 (1 HSPs)
scaffold0198 (121-221)||(23995-24094)
[»] scaffold0035 (1 HSPs)
scaffold0035 (162-290)||(46527-46655)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-175)||(8509-8682)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-88)||(1062-1151)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-116)||(8496-8613)
scaffold0621 (1-43)||(6565-6607)
[»] scaffold0107 (1 HSPs)
scaffold0107 (24-143)||(15362-15483)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-88)||(53551-53640)
[»] scaffold0311 (1 HSPs)
scaffold0311 (162-291)||(6877-7006)
[»] scaffold0111 (1 HSPs)
scaffold0111 (162-291)||(32626-32754)
[»] scaffold0324 (1 HSPs)
scaffold0324 (212-291)||(15642-15721)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-88)||(2808-2897)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-88)||(38704-38793)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-67)||(1092-1160)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-120)||(4721-4841)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-69)||(32566-32636)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-69)||(160714-160784)
scaffold0001 (1-120)||(501111-501231)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-43)||(1112-1154)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-43)||(6842-6884)
[»] scaffold0484 (1 HSPs)
scaffold0484 (107-176)||(1052-1122)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-88)||(12598-12687)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-43)||(6641-6683)
scaffold0333 (1-43)||(14021-14063)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-43)||(5673-5715)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-43)||(6172-6214)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-47)||(8119-8165)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-43)||(2694-2736)
[»] scaffold0130 (1 HSPs)
scaffold0130 (51-172)||(27912-28034)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-43)||(23932-23974)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-153)||(4554-4709)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-88)||(22672-22761)
scaffold0037 (162-291)||(21368-21497)
scaffold0037 (1-120)||(82099-82219)
[»] scaffold0028 (7 HSPs)
scaffold0028 (1-43)||(62228-62270)
scaffold0028 (1-120)||(134238-134358)
scaffold0028 (1-120)||(136707-136827)
scaffold0028 (1-120)||(139176-139296)
scaffold0028 (1-120)||(144114-144234)
scaffold0028 (1-35)||(132688-132722)
scaffold0028 (1-120)||(141645-141765)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-43)||(15826-15868)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-47)||(60761-60807)
scaffold0010 (1-88)||(129935-130024)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-67)||(11494-11562)
[»] scaffold0412 (1 HSPs)
scaffold0412 (162-291)||(6215-6344)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-67)||(38279-38347)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-42)||(14747-14788)
[»] scaffold1296 (1 HSPs)
scaffold1296 (163-291)||(582-710)
[»] scaffold0761 (2 HSPs)
scaffold0761 (1-84)||(4324-4408)
scaffold0761 (163-291)||(6108-6236)
[»] scaffold0425 (1 HSPs)
scaffold0425 (162-290)||(348-476)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-44)||(25136-25179)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-43)||(159-201)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-43)||(1083-1125)
[»] scaffold0357 (2 HSPs)
scaffold0357 (1-88)||(13158-13247)
scaffold0357 (1-69)||(16121-16191)
[»] scaffold0327 (1 HSPs)
scaffold0327 (46-159)||(3460-3574)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-43)||(45841-45883)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-88)||(10557-10646)
[»] scaffold0615 (1 HSPs)
scaffold0615 (186-291)||(1883-1988)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-87)||(12796-12884)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-69)||(10800-10869)
[»] scaffold0395 (1 HSPs)
scaffold0395 (31-171)||(881-1021)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-67)||(18050-18118)
[»] scaffold0220 (1 HSPs)
scaffold0220 (162-291)||(4732-4861)
[»] scaffold0158 (2 HSPs)
scaffold0158 (162-291)||(3030-3159)
scaffold0158 (162-291)||(6696-6825)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-69)||(16811-16880)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-87)||(12969-13057)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-42)||(129021-129061)
scaffold0022 (1-40)||(78352-78391)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-120)||(13419-13539)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-120)||(20774-20894)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-120)||(37848-37968)
[»] scaffold1403 (1 HSPs)
scaffold1403 (1-40)||(580-619)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-44)||(6332-6375)
[»] scaffold0507 (1 HSPs)
scaffold0507 (2-90)||(8059-8151)
[»] scaffold0165 (2 HSPs)
scaffold0165 (135-176)||(3648-3689)
scaffold0165 (135-176)||(7712-7753)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-42)||(97035-97076)
scaffold0006 (1-42)||(106313-106354)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-120)||(13974-14094)


Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 21396071 - 21395781
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  21396071 tcatgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaa 21395972  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctc 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21395971 cattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctc 21395872  T
Q  201 attattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| |||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||| || |||||||||||||    
T  21395871 attactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggc 21395781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 21790564 - 21790274
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  21790564 tcatgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaa 21790465  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctc 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21790464 cattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctc 21790365  T
Q  201 attattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| |||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||| || |||||||||||||    
T  21790364 attactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggc 21790274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 21389541 - 21389254
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  21389541 tcatgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 21389442  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctc 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||    
T  21389441 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctc 21389342  T
Q  201 attattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcga 288  Q
    |||| |||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||||||    
T  21389341 attactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcga 21389254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21778867 - 21778697
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  21778867 tcatgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 21778768  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 171  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21778767 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 31971287 - 31971463
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31971287 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtataca 31971385  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  31971386 aatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagatta 31971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16199735 - 16199559
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  16199735 tcatgcagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaa 16199636  T
Q  100 atattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||    
T  16199635 atattcttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagatta 16199559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 45131087 - 45130911
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaa-ttcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  45131087 tcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtataca 45130989  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||| |||||||||||||||    
T  45130988 attattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagatta 45130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 21919091 - 21918915
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||| ||||||||||  ||| |    
T  21919091 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc 21918993  T
Q  98 aaata-ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagat 174  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||| || ||||| ||||||  |||||||||||||    
T  21918992 aaataattcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagat 21918915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18879322 - 18879150
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||  ||| ||||    
T  18879322 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaa 18879226  T
Q  101 tattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||  | ||||||||| ||| |||||||||||| || || |||||| ||||||||||||||||    
T  18879225 tattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatctta-tcagcttcacagatta 18879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20536238 - 20536416
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  20536238 tcatgcagcttagttaaataacaa-cagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 20536336  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||| ||| ||||| ||||||  || ||||||||||||    
T  20536337 aaatattcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagatta 20536416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 17353865 - 17353736
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || | ||| |||||||||||||| || | ||||||||    
T  17353865 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcact 17353766  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| ||||||  |||||||||||||||    
T  17353765 tgcactcagttctgcaagtgctcgcgaggc 17353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22626766 - 22626943
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  22626766 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattca 22626864  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| ||||||||||||  || ||||||||| ||| |||| |||| || ||||| ||||||  |||||||||||||||    
T  22626865 attatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatta 22626943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18818500 - 18818322
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   |||||||||||||||||||  || ||| || |||||||  ||| |    
T  18818500 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattc 18818402  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  18818401 aattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 18818322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 21924019 - 21923841
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||   ||||||||||| |||||||||||| ||| ||| ||||||||||  ||| |    
T  21924019 tcatgcagcttagttaaataacaa-cagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattc 21923921  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||| ||||    | |||||||||||||||||| ||||||  |||||||||||||||    
T  21923920 aattatacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagatta 21923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 19899286 - 19899415
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  19899286 cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 19899385  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  19899386 tgcactcagttctggaagtgctcgcgaggc 19899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 28649135 - 28648957
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   |||| ||||||||||||||||||| | ||| ||| ||||||||||  |||||    
T  28649135 tcatgcagcttagttaaataacaaa-agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatac 28649037  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  |||||||||||  || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  28649036 attcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 28648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7372808 - 7372978
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  7372808 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 7372906  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||       ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  7372907 aattatacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 7372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 23406409 - 23406589
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatc--aacatcttatgtat 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||| |  | |||||||  |||    
T  23406409 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacatatcatcttaaatat 23406507  T
Q  96 acaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     ||| ||| |||||||||||||| | ||||||||| |||  |||| |||||| ||||| ||||||  || ||||||| ||||    
T  23406508 tcaattatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatatta 23406589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22875095 - 22875273
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||| ||  |||||||| |||||||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  22875095 tcatgcagcttagttaaatagcag-cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 22875193  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 176  Q
       ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||| |  |||||||||||||||    
T  22875194 ttcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 22875273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 23648583 - 23648761
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| ||||||||| ||||||  ||||||||||||||  |   ||||||||||||||||||||||||| || |||| || ||||||||||  ||| |    
T  23648583 tcatgcaacttagttaattaacaat-agcaacataggcagattacaacaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattc 23648681  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||  |  |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||||||||    
T  23648682 aataaaacttcaagtaatgcacacaacattatatcacatcataatcaacatcaacacatcttaaacagcttaacagatta 23648761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 24755912 - 24756041
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| |||||||||||||||||| |||||| | ||||||||||  || ||   | ||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 24756011  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  24756012 tgcactcagttctggaagtgctcgcgaggc 24756041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16092433 - 16092272
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |||||||||||   |||| ||||||||||||||||||| | ||| ||| |||||||| |  |||||    
T  16092433 tcatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatac 16092335  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctta 159  Q
    |   ||  || ||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||    
T  16092334 attcataatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatctta 16092272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 291
Target Start/End: Original strand, 16184877 - 16185048
Alignment:
Q  119 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 218  Q
    ||||||||| | ||| | ||||||||||  ||||| || ||| |||||||||||||| ||  |||| ||||||||||||| ||||| |||||| ||||||    
T  16184877 taaacattaaatcacattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtcc 16184975  T
Q  219 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| || ||||| ||||||||||  || ||   |||| ||||||| | |||||| ||||||||||||||||    
T  16184976 atctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggc 16185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17140946 - 17141014
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||||||    
T  17140946 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatc 17141014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 19983284 - 19983413
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| |||||| || |||||||| || ||||| |||||||||| ||| ||   |||||| |    
T  19983284 cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatt 19983383  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||| | ||||||||||||||||    
T  19983384 tgcactcagttttggaagtgctcgcgaggc 19983413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6759288 - 6759464
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |||||||||||   |||||||||||||||||||||||| | |||    ||||||||| |  |||||    
T  6759288 tcatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaa---gtcaacatctcaattatac 6759383  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 176  Q
    |   ||  ||||| |||||| || ||||||||| ||| |||||||||||| ||||| ||||| |  |||||||||||||||    
T  6759384 actcataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 6759464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 19976655 - 19976765
Alignment:
Q  181 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 280  Q
    |||||||||| ||||||| ||||| |||| | || |||||||| || ||||| |||||||||| ||| ||   |||||||||||||| |||||| |||||    
T  19976655 taacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagt 19976754  T
Q  281 gctcgcgaggc 291  Q
    |||||||||||    
T  19976755 gctcgcgaggc 19976765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5866365 - 5866297
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  5866365 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 5866297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6520398 - 6520486
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 87  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  6520398 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 6520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 21161986 - 21161857
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| ||||||| |||||||||| || ||||  || ||||||| ||| ||   ||||||||    
T  21161986 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcact 21161887  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  21161886 tgcactcagttctggaagtgctcgcgaggc 21161857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 291
Target Start/End: Complemental strand, 23776864 - 23776633
Alignment:
Q  61 taatatcaatttcaattcatcaacatcttatgtatacaaatat-tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt 158  Q
    |||||||||||||| |||| ||||||||||   || |||  || |||| |||||||||| | |||||||||  || ||||| |||||| |||||| || |    
T  23776864 taatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacattatataacatcatattcaacatcaacatttcat 23776766  T
Q  159 attcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacaca-aatcacattttcct 257  Q
    |  |||||||||| ||| ||  |||||||||||||||||| ||||| |||| ||| ||||||||| || ||||| |||||||||| | || || | ||||    
T  23776765 aa-cagcttcacaaattgcagttaacttcttatataggtcacattactacctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcct 23776667  T
Q  258 cacttgcactaagttctagaagtgctcgcgaggc 291  Q
      |||||||| ||||||  |||||||||||||||    
T  23776666 agcttgcactcagttctgaaagtgctcgcgaggc 23776633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21491025 - 21491092
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatat 66  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| ||||||||||    
T  21491025 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 21491092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21285627 - 21285716
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||| ||||||||||||||| |||||||||||||||  | |||||||||| |||| |||||||| | ||| ||| ||||||||    
T  21285627 tcatgcagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 21285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23760935 - 23760893
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23760935 tcatgcagcttagttaaataacaaacagcaacataggcagtat 23760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 25363123 - 25363053
Alignment:
Q  107 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagatta 25363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38855342 - 38855300
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38855342 tcatgcagcttagttaaataacaaacagcaacataggcagtat 38855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 983497 - 983455
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  983497 tcatgcagcttagttaaataacaatcagcaacataggcagtat 983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13508176 - 13508108
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| |||||||||||||| |||  |||||| ||||| |||||||||||    
T  13508176 tcatgcagcttagttaattaacaatcagcaacataggcaatatgcacaacatcatgatataataatatc 13508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 20465967 - 20465838
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||| |||||||| || | || ||| ||| || ||||| | |||    | ||||||    
T  20465967 cagcttcacagattgcagttaacctcttatataggtcacattactacctaagggtccgtccctaatcaattcaagcaacacagaacacgacattctcact 20465868  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  20465867 tgcactcagttctggaagtgctcgcgaggc 20465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 21168649 - 21168520
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| ||||||| |||||||||| || ||||  |||||||||| ||| ||   ||||||||    
T  21168649 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcact 21168550  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| || ||  |||||||| |||||||    
T  21168549 tgcactcagatcaggaagtgcttgcgaggc 21168520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14409579 - 14409459
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  14409579 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 14409482  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  14409481 acatataattcaagtaatgcata 14409459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16413451 - 16413331
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  16413451 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 16413354  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  16413353 acatataattcaagtaatgcata 16413331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 289
Target Start/End: Original strand, 377469 - 377596
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||| ||||||||||| | || ||| ||| || ||||| |||||    | |||| |    
T  377469 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcacgacattctcatt 377568  T
Q  262 tgcactaagttctagaagtgctcgcgag 289  Q
     ||||| |||||| ||||||||||||||    
T  377569 agcactcagttctggaagtgctcgcgag 377596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19154978 - 19154935
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  19154978 tcatgcagcttagttaataaacaaacagcaacataggcagtata 19154935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20498592 - 20498681
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta--tacaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||| |||||||||  |||||||||||||||||||||||  || || | ||||| |||| |||||||| | ||| ||||||||||||    
T  20498592 tcatgcaacttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatct 20498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26355789 - 26355747
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  26355789 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 26355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17612201 - 17612133
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| || |||||||||||||||  | |||| ||||| |||||||||||    
T  17612201 tcatgcagcttagttaattaacaatcaacaacataggcagtatgcaaaacatcatgatataataatatc 17612133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20046330 - 20046261
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaa 69  Q
    |||||||||||||||||||||||| |||||||| |  ||||||||||   ||||||||||||||||||||||    
T  20046330 tcatgcagcttagttaaataacaa-cagcaacacaa-cagtatacaaaaacaacatgacataataatatcaa 20046261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24353050 - 24353091
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  24353050 tcatgcagcttagttaataaacaaacagcaacataggcagta 24353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37116377 - 37116418
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  37116377 tcatgcagcttagttaataaacaaacagcaacataggcagta 37116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1484429 - 1484549
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  1484429 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 1484526  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  1484527 acatataattcaagtaatgcata 1484549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5853427 - 5853307
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  5853427 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 5853330  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  5853329 acatataattcaagtaatgcata 5853307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20403254 - 20403374
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  20403254 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 20403351  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  20403352 acatataattcaagtaatgcata 20403374  T

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Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22001780 - 22001900
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  22001780 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 22001877  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  22001878 acatataattcaagtaatgcata 22001900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18678193 - 18678102
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata---caacaacatgacataataatatcaatttcaattcatcaacatctta 90  Q
    ||||||| |||||||||||||| || |||| |||||||||  ||   ||||| || ||||||| |||||||||| ||||||| ||||||||||    
T  18678193 tcatgcaacttagttaaataac-aatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatctta 18678102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32121762 - 32121853
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata---caacaacatgacataataatatcaatttcaattcatcaacatctta 90  Q
    ||||||| |||||||||||||| || |||| |||||||||  ||   ||||| || ||||||| |||||||||| ||||||| ||||||||||    
T  32121762 tcatgcaacttagttaaataac-aatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatctta 32121853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13597708 - 13597640
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| |||||||||| |||| ||  | |||| ||||| |||||||||||    
T  13597708 tcatgcagcttagttaattaacaatcagcaacataagcagaatgcaaaacatcatgatataataatatc 13597640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15203366 - 15203297
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  15203366 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 15203297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17267085 - 17267044
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  17267085 tcatgcagcttagttaataaacaaacaacaacataggcagta 17267044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17439598 - 17439557
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  17439598 tcatgcagcttagttaataaacaaacaacaacataggcagta 17439557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 17926635 - 17926578
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcca 219  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| |||| |||||||||    
T  17926635 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtcca 17926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41598215 - 41598335
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||| |||||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  41598215 tcatgcagcttagttgaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 41598312  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  41598313 acatataattcaagtaatgcata 41598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 6e-83; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20309138 - 20309313
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20309138 tcatgcagcttagttaaataacaaatagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 20309237  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20309238 tattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38205 - 38029
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  38205 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtataca 38107  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||    
T  38106 aacattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagatta 38029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 57 - 291
Target Start/End: Complemental strand, 40622244 - 40622007
Alignment:
Q  57 ataataatatcaatttcaattcatcaacatcttatgtataca-----aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaac 151  Q
    ||||| ||||||||| ||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||| || ||||||||||||  |||    
T  40622244 ataattatatcaatt-caattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  152 atatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacat 251  Q
    || || ||  |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||| ||| ||| ||     
T  40622145 atctcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaa 40622047  T
Q  252 tttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||| |||||| ||||||||||||||||    
T  40622046 tatcctcacttgcactcagttctggaagtgctcgcgaggc 40622007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 23285895 - 23286082
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||  ||| ||||    
T  23285895 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaa 23285992  T
Q  101 tattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    | ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  23285993 tgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatctt 23286082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 22731325 - 22731147
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||||   ||||||||||||||||||| |||||||||||||| |||  ||| |    
T  22731325 tcatgcagcttagttaaataacaa-cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattc 22731227  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22731226 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 298906 - 298727
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||  ||||||||| ||||||| ||||||||||  ||| |    
T  298906 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattc 298807  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||| |  ||||||||||||| |||||||||| ||| ||||||| || ||||||| ||||||| |||||||||| ||||    
T  298806 aaataattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatatta 298727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 23654477 - 23654286
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || || ||||||||| ||||||   || ||||||||||||||||||||| ||||||||||||||||||  ||| |    
T  23654477 tcatgcagcttagttaaataacaa-caacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattc 23654379  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    || ||||  ||||||||||||| |||||||||| ||| ||||||| |||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  23654378 aagtattactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctctt 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 22738270 - 22738093
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||  || ||||||||| ||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  22738270 tcatgcagcttagttaaataacaa-cattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 22738173  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22738172 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22738093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 23038227 - 23038355
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||| || |||||||||||||||| ||| || |||||||||||    
T  23038227 agcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcactt 23038326  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| |||||| ||||||||| ||||||    
T  23038327 gcactcagttctggaagtgctcacgaggc 23038355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23060543 - 23060716
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||| ||||||||||  |||      
T  23060543 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatatta 23060641  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 171  Q
    || ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  23060642 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 23060716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 23076472 - 23076650
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| ||| ||||||  ||| |    
T  23076472 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattc 23076570  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| | ||||  |||||||||||||||    
T  23076571 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagatta 23076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 106 - 291
Target Start/End: Complemental strand, 22740945 - 22740759
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 22740847  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| ||||||||||||||||    
T  22740846 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggc 22740759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 23103486 - 23103254
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaa 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || ||||||| |||||||||||||||||| |   || ||     
T  23103486 tcatgcagcttagttaaataa-aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcat 23103388  T
Q  100 atattcttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggt 197  Q
      ||  ||||||| |||||  ||||||||||| ||| ||| |  |||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||    
T  23103387 tcataattcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcata-acagcttcacagattgcagttaacttcttatataggt 23103289  T
Q  198 ctcattattacccaagggtccatctccaaacaaat 232  Q
    ||||||| |||| ||||||||||||| || |||||    
T  23103288 ctcattactaccaaagggtccatctctaatcaaat 23103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 22799217 - 22798925
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| ||||||||||||||||  |||| |||||||||   ||||||||||   ||| | ||||||||||||||| |||| ||||||||||   || |    
T  22799217 tcatgcaacttagttaaataacaat-agcagcataggcagatcacaacaacatcatgacttcataatatcaatttcatttcaacaacatcttaatcattc 22799119  T
Q  98 aaatat-tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatatag 195  Q
    ||  || |||| |||||| ||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||    
T  22799118 aataatatctt-aagtaaggcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacaaattgcagttaacttcttatatag 22799021  T
Q  196 gtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||| ||||| |||||| ||||||||||| || ||||| |||||||||| ||| || | |||| ||||||||| |||||| ||||||||||||||||    
T  22799020 gtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggc 22798925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 291
Target Start/End: Complemental strand, 23019752 - 23019505
Alignment:
Q  44 acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatat-tcttcaagtaatgcata-aacattataacacttcataat 141  Q
    ||||||||||||| | ||||||||||||||| |||| ||||||||||   || |||  || |||| |||||||||| | ||| ||||| ||| ||||| |    
T  23019752 acaacaacatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatcacatcatatt 23019654  T
Q  142 caacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgaca 241  Q
    |||||  ||||| || ||   ||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||| ||| ||  |||| ||||||||    
T  23019653 caacattaacatttcataaa-agcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgaca 23019555  T
Q  242 caaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    || ||| || | |||| ||||||||| |||||| ||||||||||||||||    
T  23019554 cagatcgcaatatcctgacttgcactcagttctggaagtgctcgcgaggc 23019505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 291
Target Start/End: Complemental strand, 22758700 - 22758514
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  ||| |||||||||||||||||||    
T  22758700 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgcagttaatttcttatataggtctcatt 22758602  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| ||||||  |||||||| ||||||    
T  22758601 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggc 22758514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22337145 - 22337323
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |||| ||||   | |||| ||||||||||||||||||| | |||  || |||||||| |  |||||    
T  22337145 tcatgcagcttagttaaataac-aacagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatac 22337243  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||  || ||||||| ||||    
T  22337244 attcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaatta 22337323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 23660061 - 23660230
Alignment:
Q  9 cttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattct 106  Q
    |||||||||| ||||| ||||||||||||||||||||  ||||  |||||||||||||||||| | ||| ||| ||||||||||  ||| |||  ||       
T  23660061 cttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataac 23660159  T
Q  107 tcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||| ||||    
T  23660160 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaatta 23660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7824 - 7735
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||||||||||||  | |||||||||| |||| |||||||| | ||| ||||||||||||    
T  7824 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 23708706 - 23708589
Alignment:
Q  5 gcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaata 102  Q
    ||||||||||||||||||| | |||||||||||||||||  | |||||||||| |||| |||||||||| ||| ||||| |||||| |   || ||||||    
T  23708706 gcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaata 23708607  T
Q  103 ttcttcaagtaatgcata 120  Q
    |  |||||||||||||||    
T  23708606 taattcaagtaatgcata 23708589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7679615 - 7679702
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 87  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||| ||||||||| | || |||||||||||    
T  7679615 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcaatgt-aagtcatcaacatc 7679702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22105439 - 22105560
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||||||||||||   | |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  22105439 tcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacttctcaattattc 22105537  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  22105538 acatataattcaagtaatgcata 22105560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25175880 - 25175922
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25175880 tcatgcagcttagttaaataacaaacagcaacataggcagtat 25175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 45678078 - 45677954
Alignment:
Q  167 tcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcac 266  Q
    ||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | || ||| |||||||||||| ||||||   | |||| ||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcac 45677979  T
Q  267 taagttctagaagtgctcgcgaggc 291  Q
    | |||||| ||||||||| ||||||    
T  45677978 tcagttctggaagtgctcacgaggc 45677954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28406006 - 28406048
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  28406006 tcatgcaacttagttaaataacaaacagcaacataggcagtat 28406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19671860 - 19671928
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  19671860 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 19671928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23072040 - 23071972
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||  || ||||| |||||||||||    
T  23072040 tcatgcagcttagttaaataacgaacaacaacataggcagtatgcaaaccatcatgatataataatatc 23071972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21155195 - 21155075
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||| |  |||||||||| ||||   ||||||||||||||||||| ||| ||| |||| ||| |  ||| |    
T  21155195 tcatgcagcttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaacgtctcaattattc 21155098  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  21155097 acatataattcaagtaatgcata 21155075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 23101093 - 23101029
Alignment:
Q  227 acaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||||||||||||| | ||| |||| |||||||||||||| |||| | ||||||||||||||||    
T  23101093 acaaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggc 23101029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26505406 - 26505526
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||| ||   ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  26505406 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 26505503  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  26505504 acatataattcaagtaatgcata 26505526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26507884 - 26508004
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||| ||   ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  26507884 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 26507981  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  26507982 acatataattcaagtaatgcata 26508004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23207307 - 23207350
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  23207307 tcatgcagcttagttaataaacaaacagcaacataggcagtata 23207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18808970 - 18809090
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  18808970 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 18809067  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  18809068 acatataattcaagtaatgcata 18809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 23130889 - 23131009
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23130889 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 23130986  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23130987 acatataattcaagtaatgcata 23131009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 23133356 - 23133476
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23133356 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 23133453  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23133454 acatataattcaagtaatgcata 23133476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 23135617 - 23135737
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23135617 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 23135714  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23135715 acatataattcaagtaatgcata 23135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23709667 - 23709547
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23709667 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 23709570  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23709569 acatataattcaagtaatgcata 23709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23712148 - 23712028
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23712148 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 23712051  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23712050 acatataattcaagtaatgcata 23712028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24367801 - 24367921
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  24367801 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 24367898  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  24367899 acatataattcaagtaatgcata 24367921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32215056 - 32214936
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||| ||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  32215056 tcatgcagcttagttaaataac-aacaacaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 32214959  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  32214958 acatataattcaagtaatgcata 32214936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 34402657 - 34402537
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  34402657 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 34402560  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  34402559 acatataattcaagtaatgcata 34402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 39682340 - 39682460
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  39682340 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 39682437  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  39682438 acatataattcaagtaatgcata 39682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8946687 - 8946732
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa 47  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||    
T  8946687 tcatgcagcttagttagataacaat-agcaacataggcagtatacaa 8946732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18786994 - 18786952
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||| ||| |||||||| |||||    
T  18786994 tcatgcagcttagttaaataacaatcagtaacataggtagtat 18786952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22134297 - 22134256
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  22134297 tcatgcagcttagttaaatatcaa-cagcaacataggcagtat 22134256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32452020 - 32451948
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaat 70  Q
    ||||||||||| |||||| | ||||||||||||||||||| || ||| ||   |||||||||| |||||||||    
T  32452020 tcatgcagcttggttaaacatcaaacagcaacataggcagcattcaaaaatagcatgacataacaatatcaat 32451948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 45029989 - 45029863
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || ||||| |  || |||||||   |||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  45029989 tcatgcagcttagttaaataacaa-caacaacacaa-caatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 45029892  T
Q  98 aaatattcttcaagtaatgcataaacatt 126  Q
    | ||||  ||||||||||||||| |||||    
T  45029891 acatataattcaagtaatgcatatacatt 45029863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 571424 - 571493
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  571424 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 571493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6726022 - 6726091
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  6726022 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 6726091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20520284 - 20520243
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  20520284 tcatgcagcttagttaataaacaaacagcaacatatgcagta 20520243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23004778 - 23004819
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  23004778 tcatgcagcttagttaataaacaaacagcaacataggtagta 23004819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 25963645 - 25963588
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcca 219  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| |||| |||||||||    
T  25963645 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtcca 25963588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32039633 - 32039513
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||| |||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  32039633 tcatgcagcttagttaaataac-aacagtaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 32039536  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  32039535 acatataattcaagtaatgcata 32039513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1319 - 1494
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1319 tcatgcagcttagttaaataacaaacagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 1418  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1419 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7296 - 7471
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  7296 tcatgcagcttagttaaataacaaacaacaacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaa 7395  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7396 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 16312 - 16487
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  16312 tcatgcagcttagttaaataagaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaa 16411  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16412 cattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 51612 - 51787
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  51612 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgtatacaaa 51711  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51712 tatccttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagatta 51787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 1140 - 965
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1140 tcatgcagcttagttaattaataaacatcaacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaa 1041  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  1040 tattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagatta 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 9e-76; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 17046517 - 17046692
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  17046517 tcatgcagcttagttaaataacaaacagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 17046616  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  17046617 cattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagatta 17046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14053392 - 14053215
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacat-cttatgtataca 98  Q
    ||||||| ||||||||||||||||||| || ||||| |||||||||| || |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  14053392 tcatgcaacttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcataca 14053293  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||    
T  14053292 aatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagatta 14053215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 12902787 - 12902978
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   |||||||||||||||||||  |||||||||||||||||  ||| |    
T  12902787 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattc 12902885  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  12902886 aaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 7088907 - 7089098
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  7088907 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattc 7089005  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||||| ||||||  || |||||||||||| || |||| ||||    
T  7089006 aaatattattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctctt 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 291
Target Start/End: Complemental strand, 15121834 - 15121602
Alignment:
Q  57 ataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 156  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||   ||||| ||    
T  15121834 ataattatatcaatt-caattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctc 15121736  T
Q  157 ttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcc 256  Q
     || ||||| ||||||||| ||  |||||||||||||||||||||||| |||| || ||||||| || |||||| | || ||||||| ||| ||   | |    
T  15121735 ata-tcagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaacaagttattcgacacagatcgcaaagttc 15121637  T
Q  257 tcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||||||||| | |||| ||||||||||||||||    
T  15121636 tcacttgcactcaattctggaagtgctcgcgaggc 15121602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22636465 - 22636642
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||||| |||| ||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  22636465 tcatgcagcttagttaaataacaa-caacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 22636563  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||| ||| ||||| ||||||  |||||||||||||||    
T  22636564 aaatattcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctta-acagcttcacagatta 22636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 44052859 - 44053037
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  44052859 tcatgcagctcagttaaataacaa-catcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 44052957  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||  | ||||||||| ||| |||||||||||| || || ||||||  |||||||||||||||    
T  44052958 aaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagatta 44053037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23374450 - 23374272
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   || ||||||||||  ||||||||| ||||||| ||||||||||  ||| |    
T  23374450 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattc 23374352  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||| |  ||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||   ||||||| ||||||    
T  23374351 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagatta 23374272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16270326 - 16270149
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| | | ||||||||||  ||| ||    
T  16270326 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattca 16270228  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  16270227 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 16270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 7798804 - 7798958
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||||||||||||||  ||| |    
T  7798804 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattc 7798902  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaaca 152  Q
    || ||| |||||||||||||| | |||||| || |||  ||||||||||| |||||    
T  7798903 aattatacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 13569703 - 13569832
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||  ||| || | ||||||||    
T  13569703 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 13569802  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  13569803 tgcactcagttctggaagtgctcgcgaggc 13569832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16377612 - 16377436
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| | ||| ||| |||||||| |  ||||||     
T  16377612 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacat 16377514  T
Q  100 atattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
      ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||  ||||||  ||||| |||||||||    
T  16377513 tcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagatta 16377436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 23843669 - 23843798
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||||||||||| |||||  ||||||||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  23843669 cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 23843768  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  23843769 tgcactcagttctggaagtgctcgcgaggc 23843798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 15093911 - 15094093
Alignment:
Q  109 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattatta 207  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  |||||||||||||||||| ||||| ||    
T  15093911 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcagagattgcagttaacttcttatataggtcacattacta 15094009  T
Q  208 cccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
     ||||||||||||||| || ||||| |||||||||| ||| || | |||| ||||||||| |||| | ||||||||||||||||    
T  15094010 accaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggc 15094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 14038678 - 14038856
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||   ||||||| |||||||||||||| | ||| ||| |||||||| |  |||||    
T  14038678 tcatgcagcttagttaaataacaa-cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatac 14038776  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| || |||  |||||||||||||||    
T  14038777 attcatatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagatta 14038856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 44675823 - 44675951
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| |||| | ||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  44675823 cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 44675922  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    |||||| |||||| |||||||||||||||    
T  44675923 tgcactcagttctggaagtgctcgcgagg 44675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7893733 - 7893908
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  7893733 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 7893831  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | | ||||||  ||| |||||||   || ||||| ||||||  |||||||||||||||    
T  7893832 aattatacttcaagtaatgcacataccattatttcacatcataat---cagcaacacatcttaaacagcttcacagatta 7893908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16240060 - 16239883
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||| |||| |||||||||||  ||||| |||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  16240060 tcatgcaacttaattaaataacaat-agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 16239962  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| ||| |||||||||| | ||||||||| ||  |||||||||||| ||||| ||||||  ||||||| |||||||    
T  16239961 attatactttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagatta 16239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 12570212 - 12570341
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| |||||||||||||||||| |||||| | ||||||||||  || ||   | ||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 12570311  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  12570312 tgcactcagttctggaagtgctcgcgaggc 12570341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 43256227 - 43256161
Alignment:
Q  24 aacagcaacataggcagtatac-aacaacatgacataataatatcaatttcaattcatcaacatctt 89  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52873458 - 52873367
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatctta 90  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||    
T  52873458 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 6899921 - 6900062
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||  ||||||  |||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  6899921 tcatgcatcttagttaaataacaat-agcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtcaacaacatcttaaatattca 6900019  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataa 140  Q
    | ||| |||||||||||| | | ||||||||| ||| ||||||    
T  6900020 attatacttcaagtaatgtacataacattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13942 - 13853
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||||||||||||  | |||||||||| |||| |||||||| | ||| ||||||||||||    
T  13942 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15551847 - 15551915
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  15551847 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgatataataatatc 15551915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 3096772 - 3096851
Alignment:
Q  97 caaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||||||||||| || | | ||||||||| |||||||| ||||||  |||||||||| ||||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatatta 3096851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12288301 - 12288259
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12288301 tcatgcagcttagttaaataacaaacagcaacataggcagtat 12288259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12774037 - 12774079
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12774037 tcatgcagcttagttaaataacaaacagcaacataggcagtat 12774079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52243287 - 52243245
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52243287 tcatgcagcttagttaaataacaaacagcaacataggcagtat 52243245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 15125038 - 15124953
Alignment:
Q  206 tacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| ||||||| ||| |||||||| |||||||||| |||  | | |||||||||||||| |||||| ||||||||||||||||    
T  15125038 tacccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggc 15124953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14280343 - 14280431
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||   |||||||||||||||||||||| | ||| ||| ||||||||    
T  14280343 tcatgcagcttagttaaataacaa-cagcaacac-ggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatct 14280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3096323 - 3096373
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  3096323 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca 3096373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22353863 - 22353984
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcag--tata-caacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||| |||||||||| ||||| |||||||||  | || |||||||||||||||| |||||||||| ||||||| |||| ||| |  ||| |    
T  22353863 tcatgcagcttaggtaaataacaa-cagcagcataggcagattgtagcaacaacatgacataacaatatcaattacaattcaacaacgtctcaattattc 22353961  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  22353962 acatataattcaagtaatgcata 22353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 17048055 - 17047989
Alignment:
Q  107 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacag 172  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 17047989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39706379 - 39706337
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  39706379 tcatgcagcttagttaaataacaaacaacaacataggcagtat 39706337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 8846391 - 8846428
Alignment:
Q  6 cagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8846391 cagcttagttaaataacaaacagcaacataggcagtat 8846428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18215409 - 18215289
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  18215409 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 18215312  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  18215311 acatataattcaagtaatgcata 18215289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 44929015 - 44928894
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| |||||||||||||| |||| | ||| |||  ||||||| |  ||| |    
T  44929015 tcatgcagcttagttaaataac-aacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatctcaattattc 44928917  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  44928916 acatataattcaagtaatgcata 44928894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 54798845 - 54798756
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||| |||||||| |||||||| | ||||||||||| ||||   ||||||||||||||||| | ||| ||| ||||||||    
T  54798845 tcatgcagcttagttgaataacaa-cagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 43198646 - 43198611
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatag 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  43198646 tcatgcagcttagttaaataacaaacagcaacatag 43198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6190492 - 6190564
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaat 70  Q
    |||||||||||||||||| | ||||||||||||||||||| || ||| ||   |||||||||| |||||||||    
T  6190492 tcatgcagcttagttaaacatcaaacagcaacataggcagcattcaaaaatagcatgacataacaatatcaat 6190564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8574958 - 8574871
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||||| |||| ||| |  ||||||||||  |||||||||||||||||||||| |  |||||| ||||||||    
T  8574958 tcatgcagcttagttaaataacaa-cagcgacacaa-cagtatacaaaacaacatgacataataatatcaaatgtaattcaacaacatct 8574871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 16596686 - 16596746
Alignment:
Q  9 cttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  16596686 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatc 16596746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19618307 - 19618238
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  19618307 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaa 19618238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12442 - 12322
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  12442 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 12345  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  12344 acatataattcaagtaatgcata 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15118487 - 15118367
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  15118487 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 15118390  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  15118389 acatataattcaagtaatgcata 15118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 16488005 - 16487877
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||  ||| |||| ||||| ||||| | ||||| |||| ||||||||||| | || ||| | |||||| ||| ||| ||   |||| ||||    
T  16488005 agcttcacagatctcaattaacatcttaaataggacacattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 16487906  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||| | |||||| ||||||||||||||||    
T  16487905 gcattcagttctggaagtgctcgcgaggc 16487877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23803400 - 23803280
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23803400 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctaaattattc 23803303  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23803302 acatataattcaagtaatgcata 23803280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 44615315 - 44615435
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  44615315 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 44615412  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  44615413 acatataattcaagtaatgcata 44615435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 52312537 - 52312657
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  52312537 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 52312634  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  52312635 acatataattcaagtaatgcata 52312657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46640547 - 46640504
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  ||||||||||||||||| |||||||    
T  46640547 tcatgcagcttagttaataaacaaacagcaacatagacagtata 46640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15355460 - 15355391
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  15355460 tcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 15355391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44773222 - 44773153
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  44773222 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 44773153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51464003 - 51463934
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | | |||||||   |||| |||||||||||||||||||    
T  51464003 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 51463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 53082243 - 53082202
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  53082243 tcatgcagcttagttaataaacaaacagcaacataagcagta 53082202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1837644 - 1837524
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||| ||| | ||| ||| |||| ||| |  ||| |    
T  1837644 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctcaattattc 1837547  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  1837546 acatataattcaagtaatgcata 1837524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 3515034 - 3515154
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||| ||| |||||||||| | |||||||||   |||| || |||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  3515034 tcatgcagcttagttaaaaaac-aacagcaacaca-gcagtatacaaaaacagcaagacataataatatcaaatgcaagtcaacaacgtctcaattattc 3515131  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  3515132 acatataattcaagtaatgcata 3515154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18239554 - 18239434
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||| || |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  18239554 tcatgcagcttagttaaataac-aacagcagcaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 18239457  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  18239456 acatataattcaagtaatgcata 18239434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19242726 - 19242846
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||| ||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  19242726 tcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 19242823  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  19242824 acatataattcaagtaatgcata 19242846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 27847921 - 27847746
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  27847921 tcatgcagcttagttaaataataaacagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 27847822  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27847821 cattcttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 40443424 - 40443597
Alignment:
Q  4 tgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaata 102  Q
    |||||||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40443424 tgcagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaata 40443523  T
Q  103 ttcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  40443524 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 40443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 71 - 291
Target Start/End: Complemental strand, 17138081 - 17137862
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || ||| |||||||||    
T  17138081 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcatat-cagcttcac 17137983  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | |||||||||||| ||    
T  17137982 agattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcag 17137883  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  17137882 ttctggaagtgctcgcgaggc 17137862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 12187115 - 12187334
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||||| ||||||||||    
T  12187115 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttcac 12187213  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||||||||||||||||||||||| |||| || |||||||||| || ||| ||| || ||| | |||||  | | |||||||||||| ||    
T  12187214 agattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactcag 12187313  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  12187314 ttctggaagtgctcgcgaggc 12187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 12698861 - 12699040
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa----caacatgacataataatatcaatttcaattcatcaacatcttatgtata 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    || ||||||||||||||||||||| ||||||||||||||||||  |||     
T  12698861 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatatt 12698959  T
Q  97 caaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12698960 caaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12699040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9509219 - 9509397
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  9509219 tcatgcagcttagttaaataacaa-cagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 9509317  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | |||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9509318 aaatattcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9509397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10589069 - 10589246
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||||||| ||||||||| ||||||| |||||||||   | | |    
T  10589069 tcatgcagcttagttaaataacaa-cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttc 10589167  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||| ||||||   ||||||||||||||    
T  10589168 aaatattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagatta 10589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 26212034 - 26212217
Alignment:
Q  9 cttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattc 105  Q
    |||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||  ||| |||||| |     
T  26212034 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataatt 26212132  T
Q  106 ttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
     ||||||||||||| |||||||||| ||| | |||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  26212133 ctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18456503 - 18456326
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||  |||||||||||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  18456503 tcatgcagcttagttaaataacgat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 18456405  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  18456404 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 18456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 106 - 291
Target Start/End: Complemental strand, 18154821 - 18154635
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||||||||||| | | ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||||||||    
T  18154821 ttcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcatt 18154723  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | ||||||| |||||||||  || |||||||||||||||| ||| ||||| ||||||||||||| |||||| ||||||||||||||||    
T  18154722 actacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggc 18154635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16386339 - 16386160
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||   || ||||||||||  |||||||||  | |||||||||||||||  ||| |    
T  16386339 tcatgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattc 16386240  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||| | |  ||||||||||||| ||||||||||  || |||||||||||||||||| ||||||  |||||||||||||||    
T  16386239 aaacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagatta 16386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 9703458 - 9703587
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||  ||| || | ||||||||    
T  9703458 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 9703557  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  9703558 tgcactcagttctggaagtgctcgcgaggc 9703587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 286
Target Start/End: Original strand, 24054618 - 24054784
Alignment:
Q  119 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 218  Q
    ||||||| ||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||| |||||||||||||||||| |||||||||||||    
T  24054618 taaacatcatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtcc 24054716  T
Q  219 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgc 286  Q
    ||||| || | ||| |||||||||| ||| || | | ||||||| |||| |||||| |||||||||||    
T  24054717 atctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgc 24054784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 38227511 - 38227671
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  38227511 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 38227609  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctta 159  Q
    | ||| |||||| ||||| | | | ||||||| ||| || ||||||||| ||||||||||||    
T  38227610 attatacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatctta 38227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 3564455 - 3564294
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||| |  || ||| |||||||| |  |||||    
T  3564455 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatac 3564357  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctta 159  Q
    |   ||  |||||||||||| || ||||||| | ||| |||||||||||| ||||| ||||||    
T  3564356 attcataattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatctta 3564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 11880463 - 11880573
Alignment:
Q  181 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 280  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| ||   |||||||||||||| |||||| |||||    
T  11880463 taacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaagt 11880562  T
Q  281 gctcgcgaggc 291  Q
    |||| ||||||    
T  11880563 gctcacgaggc 11880573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 289
Target Start/End: Complemental strand, 19649469 - 19649285
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  |||||  ||||  | |||||||||||| ||  |||||||| || ||||||||| |    
T  19649469 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaa-ctgcttcacagattgcagttaacttctaatttaggtctcaat 19649371  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgag 289  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | ||||||||| ||||  ||||| ||||||||||||||    
T  19649370 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgag 19649285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 2530205 - 2530139
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatctt 89  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28505389 - 28505321
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  28505389 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 28505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34200816 - 34200884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  34200816 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 34200884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13647355 - 13647476
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||||||||||||   | |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  13647355 tcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 13647453  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  13647454 acatataattcaagtaatgcata 13647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16213711 - 16213831
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||   |||||||||||||||||||||| | ||| ||| |||| |||||  ||| |    
T  16213711 tcatgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacaacatgacataataatatcaaatccaagtcaacaacgtcttaattattc 16213808  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  16213809 acatataattcaagtaatgcata 16213831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 67775 - 67817
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  67775 tcatgcagcttagttaaataacaaacagcaacataggcagtat 67817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 48273421 - 48273508
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||   ||||||||||||||||| | ||| ||| ||||||||    
T  48273421 atgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16495432 - 16495500
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||  || ||||| |||||||||||    
T  16495432 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatc 16495500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16219808 - 16219717
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatctta 90  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||||    
T  16219808 tcatgtagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24704715 - 24704832
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||| |||| |||||||||||||||| | ||| ||| |||| ||| |  ||| || |    
T  24704715 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaagacataataatatcaaatgcaagtcaacaacgtctcaattattcaca 24704812  T
Q  101 tattcttcaagtaatgcata 120  Q
    |||  |||||||||||||||    
T  24704813 tataattcaagtaatgcata 24704832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 811222 - 811180
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  811222 tcatgcagcttagttaaataacaaatagcaacataggcagtat 811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2280210 - 2280121
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||  |||||||| |||||||||||||||  | |||| ||||| ||||||||||||| | ||| ||| ||||||||    
T  2280210 tcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatct 2280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 16056360 - 16056446
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacataggcagtatac-aacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||| |||||||||||||||||||||||||||| || ||| | |||||||||| |||| |||||||| | ||| ||| ||||||||    
T  16056360 atgcaccttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 16056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18005676 - 18005718
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  18005676 tcatgcagcttagttaaataacaaacagcaacataagcagtat 18005718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44014208 - 44014250
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  44014208 tcatgcagcttagttaaataacaaacaacaacataggcagtat 44014250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 12321666 - 12321541
Alignment:
Q  166 ttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgca 265  Q
    |||||||||| ||  |||| ||||||||||||| ||||| |||| ||| ||||||| | || ||| |||||||||||| ||| |    | |||| |||||    
T  12321666 ttcacagattgcagttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgca 12321567  T
Q  266 ctaagttctagaagtgctcgcgaggc 291  Q
    || |||||| ||||||||||||||||    
T  12321566 ctcagttctggaagtgctcgcgaggc 12321541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24275198 - 24275318
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  24275198 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 24275295  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  24275296 acatataattcaagtaatgcata 24275318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24702265 - 24702385
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  24702265 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 24702362  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  24702363 acatataattcaagtaatgcata 24702385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12255884 - 12255842
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  12255884 tcatgcagcttagttaaataacaaacaacaacatagtcagtat 12255842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12901353 - 12901399
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa 47  Q
    |||||||||||||||||  |||||||| |||||||||||||||||||    
T  12901353 tcatgcagcttagttaataaacaaacaacaacataggcagtatacaa 12901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47831837 - 47831879
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  47831837 tcatgcagcttagttaaataacaaacaacaacatagacagtat 47831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10063909 - 10063841
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||  |||||| ||||| |||||||||||    
T  10063909 tcatgcaacttagttaattaacaatcagcaacataggcggtatgcacaacatcatgatataataatatc 10063841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14036284 - 14036325
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  14036284 tcatgcagcttagttaataaacaaacagcaacataggcagta 14036325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14346314 - 14346355
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  14346314 tcatgcagcttagttaataaacaaacagcaacataggcagta 14346355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 22072944 - 22072981
Alignment:
Q  2 catgcagcttagttaaataacaaacagcaacataggca 39  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22072944 catgcagcttagttaaataacaaacaacaacataggca 22072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44116536 - 44116605
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaa 69  Q
    ||||||||||| |||||||||||| |||||||| || ||||||||||   ||||||||||||||||||||||    
T  44116536 tcatgcagcttggttaaataacaa-cagcaacacag-cagtatacaaaaacaacatgacataataatatcaa 44116605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 456348 - 456468
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  456348 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 456445  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  456446 acatataattcaagtaatgcata 456468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11393422 - 11393302
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  11393422 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 11393325  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  11393324 acatataattcaagtaatgcata 11393302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11972523 - 11972643
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  11972523 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 11972620  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  11972621 acatataattcaagtaatgcata 11972643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11996118 - 11996051
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatat 66  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||| |||  || ||||| ||||||||||    
T  11996118 tcatgcatcttagttaattaacaaacaacaacataggcagtatgcaaaccatcatgatataataatat 11996051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14949257 - 14949137
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  14949257 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 14949160  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  14949159 acatataattcaagtaatgcata 14949137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15376848 - 15376728
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  15376848 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 15376751  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  15376750 acatataattcaagtaatgcata 15376728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16232547 - 16232667
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  16232547 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 16232644  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  16232645 acatataattcaagtaatgcata 16232667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18430739 - 18430859
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||   | |||| ||||||||||||||||||| | ||| ||| |||||||| |  ||| |    
T  18430739 tcatgcagcttagttaaataac-aacagcaacaca-acagtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattattc 18430836  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  18430837 acatataattcaagtaatgcata 18430859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18640299 - 18640419
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  18640299 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 18640396  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  18640397 acatataattcaagtaatgcata 18640419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20385258 - 20385138
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  20385258 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 20385161  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  20385160 acatataattcaagtaatgcata 20385138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21189730 - 21189610
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  21189730 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 21189633  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  21189632 acatataattcaagtaatgcata 21189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27216887 - 27217007
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  27216887 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 27216984  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  27216985 acatataattcaagtaatgcata 27217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32125518 - 32125638
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  32125518 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 32125615  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  32125616 acatataattcaagtaatgcata 32125638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41522944 - 41523064
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  41522944 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 41523041  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  41523042 acatataattcaagtaatgcata 41523064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41525406 - 41525526
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  41525406 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 41525503  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  41525504 acatataattcaagtaatgcata 41525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17062050 - 17061981
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||  || | |||||||||||||||||||    
T  17062050 tcatgcagcttagttaaataacaatcagcaac-tcagcagtatacaaaatagcatgacataataatatcaa 17061981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48991210 - 48991253
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  48991210 tcatgcagcttagttaataaacaaacaacaacataggcagtata 48991253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 10508918 - 10508881
Alignment:
Q  254 tcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  10508918 tcctcacttgcactcagttctggaagtgctcgcgaggc 10508881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14044776 - 14044817
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  14044776 tcatgcagcttagttaataaacaaaaagcaacataggcagta 14044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14354806 - 14354847
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  14354806 tcatgcagcttagttaataaacaaaaagcaacataggcagta 14354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15754978 - 15754910
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||| | ||| ||||| ||||| |||  || ||||| |||||||||||    
T  15754978 tcatgcagcttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatc 15754910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16410086 - 16410155
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  16410086 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 16410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32097 - 32272
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaa 99  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32097 tcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaa 32195  T
Q  100 atattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  32196 atattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 32272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 6e-71; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16920721 - 16920546
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||| ||| ||||||||||||||||||||||||||    
T  16920721 tcatgcagcttagttaaataacaaacagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaa 16920622  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  16920621 tattcttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagatta 16920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22831533 - 22831710
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatctta--tgtataca 98  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||| |||||||||||| ||||||| ||||||||||||||||||||  ||||||||    
T  22831533 tcatgcagcttagttaaataacaaacagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagatgtataca 22831632  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22831633 aacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 11185535 - 11185711
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||    
T  11185535 tcatgcagcttagttaaataacaaacaacaacatgtgcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaa 11185634  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattac 177  Q
     |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  11185635 cattcttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattac 11185711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35245616 - 35245758
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35245616 tcatgcagcttagttaattaacaaacaccaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 35245715  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatca 143  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||    
T  35245716 tattcttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20361051 - 20360873
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  20361051 tcatgcagcttagttaaataacaa-cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 20360953  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||  |||||||||| ||||    
T  20360952 aaatattcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatatta 20360873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20638374 - 20638196
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||||||||   ||| |    
T  20638374 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattc 20638276  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||| |||||||||||||||||| |||| ||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20638275 aaacattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20638196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 29060570 - 29060748
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||| | ||| ||| |||||||| | ||||||    
T  29060570 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 29060668  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  ||||||||||||| | ||||||||| | | |||||||||||| ||||| ||||||  |||||||||||||||    
T  29060669 attcataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagatta 29060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 19863171 - 19863300
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| |||||| ||| || | |||| |||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttact 19863270  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  19863271 tgcactcagttctggaagtgctcgcgaggc 19863300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 19873313 - 19873442
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| ||  |||| |||||||||| ||| || | |||| |||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttact 19873412  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  19873413 tgcactcagttctggaagtgctcgcgaggc 19873442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 291
Target Start/End: Complemental strand, 25642168 - 25641982
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 25642070  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||||||| || ||||| ||||||||||  || || | |||||||||||||| |||||| ||||||||||||||||    
T  25642069 actacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggc 25641982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16496274 - 16496397
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||  ||| |    
T  16496274 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattc 16496372  T
Q  98 aaatattcttcaagtaatgcataaa 122  Q
    ||||| |  ||||||||||||||||    
T  16496373 aaataattctcaagtaatgcataaa 16496397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 291
Target Start/End: Original strand, 22438951 - 22439122
Alignment:
Q  119 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 218  Q
    ||||| ||||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||| |||||||| |||||||||||||    
T  22438951 taaactttatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtcc 22439049  T
Q  219 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| || | ||| |||||||||| ||| || | | |||||||||||| |||| | ||||||||||||||||    
T  22439050 atctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggc 22439122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 22432443 - 22432572
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    ||||||||||||||  |  |||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| |||||| ||| || | | || |||    
T  22432443 cagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaact 22432542  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  22432543 tgcactcagttctggaagtgctcgcgaggc 22432572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 22780318 - 22780140
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||  |||||||||| ||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  22780318 tcatgcagcttagttaaataacaa-caaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattc 22780220  T
Q  98 aaatattcttcaagtaatgca-taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| ||||||||||||||   ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  22780219 aattatacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 22780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 17287887 - 17287713
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||   || ||||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  17287887 tcatgcagcttagttaaataacaa-cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 17287789  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 172  Q
    || ||| |||||||||||||| | ||||||||  ||   ||||||||||  ||||| ||||||  |||||||||||    
T  17287788 aattatacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacag 17287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 22334819 - 22334690
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||| ||||||| ||  |||||||||||||||||||||||  |||||| ||||||| ||| || ||||| |||||||||| ||| || | ||||||||    
T  22334819 cagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcact 22334720  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  22334719 tgcattcagttctggaagtgctcgcgaggc 22334690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19303631 - 19303454
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| || ||||| ||| |||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  19303631 tcatgcagcttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaattataca 19303533  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
       ||  ||||||||||| | | ||||||||| ||| |||||||||||| ||||| |||||   |||||||||||||||    
T  19303532 ttcatatttcaagtaatgtacataacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagatta 19303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20593803 - 20593981
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||| |||||||||| ||||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||||||| |  |||||    
T  20593803 tcatgcagctcagttaaataa-aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatac 20593901  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||  ||   ||||||||||| || |||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20593902 aatcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20593981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18409918 - 18409740
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||   |||||||||||||||||||||||| | ||| ||| |||||||| |   || |    
T  18409918 tcatgcagctcagttaaataacaa-cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatcc 18409820  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  ||||| |||| |||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  18409819 attcataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 18409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 25629446 - 25629268
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||| |||| ||| |||| | |||||||||   |||| |||||||||| |||||||| | ||| ||| |||||||| |  |||||    
T  25629446 tcatgcagcttagttaaattacaa-caggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatac 25629348  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  25629347 attcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 25629268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 20076730 - 20076857
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||||||||||||||| | |||   ||||||||||||   || ||    
T  20076730 tcatgcagcttagttaaataac-aacagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatcttaaaaattca 20076825  T
Q  99 aatattcttcaagtaatgcata-aacattata 129  Q
    | ||| ||||||||||||| || |||||||||    
T  20076826 attatacttcaagtaatgcgtataacattata 20076857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 27416008 - 27415887
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 120  Q
    ||||||||||||||||| |||||| || |||||||||||| |||||||||||||||| |||||||||  |||| ||||| |||||| | ||||||||| |    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 27415910  T
Q  121 aacattataacacttcataatca 143  Q
    ||||||||| ||| | |||||||    
T  27415909 aacattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 15894357 - 15894229
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    ||||||||||||||  |  |||| || |||||||||| ||||| |||||||||||||||||| |||||| | ||||||||||   | ||   | ||||||    
T  15894357 cagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcact 15894258  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    |||||| |||||| |||||||||||||||    
T  15894257 tgcactcagttctggaagtgctcgcgagg 15894229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20109168 - 20109285
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||  |||||| | |||| |||||||| | ||| |||||||||||| |  ||| ||    
T  20109168 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatctcaaatattca 20109267  T
Q  99 aatattcttcaagtaatg 116  Q
     ||||  |||||||||||    
T  20109268 tatataattcaagtaatg 20109285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27333309 - 27333267
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27333309 tcatgcagcttagttaaataacaaacagcaacataggcagtat 27333267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27394049 - 27394007
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27394049 tcatgcagcttagttaaataacaaacagcaacataggcagtat 27394007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 21739950 - 21739821
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | |||||| ||||| |||||| ||| ||   | |||| |    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaat 21739851  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    || ||| |||||| ||||||||||||||||    
T  21739850 tgtactcagttctggaagtgctcgcgaggc 21739821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1595576 - 1595692
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||   |||||||||||||||||||||| | ||||||| |||| ||| |  ||| |    
T  1595576 tcatgcagcttagttaaataacaa-cagcaacataa-cagtatacaaaaacaacatgacataataatatcaaatgcaattcaacaacgtctcaattattc 1595673  T
Q  98 aaatattcttcaagtaatg 116  Q
    | ||||  |||||||||||    
T  1595674 acatataattcaagtaatg 1595692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25644350 - 25644440
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||   ||| |||| |||||||| |  || ||||||||||||    
T  25644350 tcatgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatct 25644440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 16924776 - 16924678
Alignment:
Q  193 taggtctcattattacccaagggtccatctccaaa-caaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||||||||| |||||| ||||||| |||| || |||| ||||||||||| ||| ||||   |||||||||||| |||||| ||||||||||||||||    
T  16924776 taggtctcattactacccaggggtcca-ctcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgctcgcgaggc 16924678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9098605 - 9098563
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  9098605 tcatgcagcttagttaaataacaaacagcaacaaaggcagtat 9098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 18907299 - 18907428
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| |||| ||||||||||| | || ||| |||||||||||| ||| ||   | |||| |    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatt 18907398  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||||  ||||| ||||||||||||||||    
T  18907399 tgcactctgttctggaagtgctcgcgaggc 18907428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25656656 - 25656725
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||||| |||||||||   |||| |||||||||||||||||||    
T  25656656 tcatgcagcttagttaaataac-aacagcaacata-gcagtatacaaaaacagcatgacataataatatcaa 25656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28496562 - 28496494
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||  || ||||| |||||||||||    
T  28496562 tcatgcagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatc 28496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29808973 - 29808905
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||  || ||||| |||||||||||    
T  29808973 tcatgcagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatc 29808905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 2291315 - 2291195
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||| |  ||||||||||   |||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  2291315 tcatgcagcttagttaaataacaa-cagcaacacaa-cagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 2291218  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  2291217 acatataattcaagtaatgcata 2291195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23019438 - 23019525
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||  |||||||||||||||| |||||||  | |||||||||| |||| |||||||| | ||| ||| ||||||||    
T  23019438 atgcagcttagttaataaacaaacagcaacataagcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcaacaacatct 23019525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 16965172 - 16965109
Alignment:
Q  228 caaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||| ||||||||   ||||||||||||||||||| |||||||||| |||||    
T  16965172 caaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggc 16965109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4185912 - 4185827
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaac 84  Q
    ||||||||| |||||||| |||| ||||||||||||||||||| |||  || ||||| |||| |||||| | | ||||||||||||    
T  4185912 tcatgcagcatagttaaacaacagacagcaacataggcagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4185827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19652225 - 19652267
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  19652225 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 19652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 31164744 - 31164646
Alignment:
Q  193 taggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||||||| || |||||| ||||||||||| || |||| |||||||||||  || ||||   |||||||||||| | |||| ||||| ||||||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtactcgcgaggc 31164646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22782254 - 22782323
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  22782254 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaa 22782323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25688529 - 25688598
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||   |||| |||||||||||||||||||    
T  25688529 tcatgcagcttagttaaataac-aacagcaacata-acagtatacaaaaacagcatgacataataatatcaa 25688598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1541046 - 1540926
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaac---atgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||| |||   |||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  1541046 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagtatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 1540949  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  1540948 acatataattcaagtaatgcata 1540926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12742344 - 12742464
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  12742344 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 12742441  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  12742442 acatataattcaagtaatgcata 12742464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 291
Target Start/End: Complemental strand, 15041596 - 15041349
Alignment:
Q  44 acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaa-atattcttcaagtaatgcataaacattataacacttcataatc 142  Q
    |||||| |||||||| |||||||||| | |||||||  ||||||||| |||| ||| | | ||| ||||||||||| | |||||| | ||  || ||||     
T  15041596 acaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatct-caagtaatgcacatacattaaaccaaatcttaatt 15041498  T
Q  143 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacac 242  Q
    | || ||||| ||||||  |||||| |||||||  |  |||| || |   |||||||||||| |||||| ||||||||||| || |||| ||||||| ||    
T  15041497 atcatcaacacatcttaaacagctttacagattgtatctaacatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatac 15041398  T
Q  243 aaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | ||| | ||   |||||||||||| | |||| |||||| | |||||||    
T  15041397 agatcgcgttaaactcacttgcactcaattctggaagtggttgcgaggc 15041349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18334727 - 18334607
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  18334727 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 18334630  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  18334629 acatataattcaagtaatgcata 18334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19005073 - 19005193
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  19005073 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 19005170  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  19005171 acatataattcaagtaatgcata 19005193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19859054 - 19858934
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  19859054 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 19858957  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  19858956 acatataattcaagtaatgcata 19858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24422574 - 24422694
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  24422574 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 24422671  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  24422672 acatataattcaagtaatgcata 24422694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25754836 - 25754956
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  25754836 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattc 25754933  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  25754934 acatataattcaagtaatgcata 25754956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30676845 - 30676725
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||| ||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  30676845 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacgtctcaattattc 30676748  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  30676747 acatataattcaagtaatgcata 30676725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33861821 - 33861941
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  33861821 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 33861918  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  33861919 acatataattcaagtaatgcata 33861941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33864305 - 33864425
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  33864305 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 33864402  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  33864403 acatataattcaagtaatgcata 33864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 19668401 - 19668436
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatag 36  Q
    ||||||||||||||||| ||||||||||||||||||    
T  19668401 tcatgcagcttagttaattaacaaacagcaacatag 19668436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1561333 - 1561401
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||| | ||| ||||| ||||| |||  || ||||| |||||||||||    
T  1561333 tcatgcagcttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatc 1561401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16448662 - 16448593
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  16448662 tcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 16448593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 21834818 - 21834689
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||| |||||||  |||| |||  ||||||||||| | || ||| | |||||| ||| ||| ||   |||| |||    
T  21834818 cagcttcacagatttcagttaacatcttaaataggtcagattactactgaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21834719  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  21834718 tgcattcagttctggaagtgctcgcgaggc 21834689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23076760 - 23076801
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  23076760 tcatgcagcttagttaataaacaaacaacaacataggcagta 23076801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35008178 - 35008219
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  35008178 tcatgcagcttagttaataaacaaacaacaacataggcagta 35008219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34963400 - 34963520
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  34963400 tcatgcaacttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 34963497  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  34963498 acatataattcaagtaatgcata 34963520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 10514 - 10339
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  10514 tcatgcagcatagttaattaacaaacagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaa 10415  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||||| |||||||||||||||    
T  10414 tattcttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagatta 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 47025 - 47200
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47025 tcatgtagcttagttaaataacaaacaacaacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 47124  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||| |||||||||||||||||||||| ||| |||||| || |||||||||||||||| |||||||||||||||    
T  47125 tattctccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagatta 47200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13527 - 13703
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  13527 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtataca 13625  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  13626 aacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 15554 - 15378
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15554 tcatgcagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaa 15456  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||| |||||||||||||||    
T  15455 aatattcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagatta 15378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 7391 - 7610
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| |||||   ||||| || || |||| ||||     
T  7391 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacgcaaacatctcata-tcagtttcat 7489  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || | |||||||||    | |||||||||||| ||    
T  7490 agattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaatacaaatcactacattctcacttgcactcag 7589  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    || | ||||||||||||||||    
T  7590 ttttggaagtgctcgcgaggc 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 129; Significance: 8e-67; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 174796 - 175086
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||| |   || ||      
T  174796 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcatt 174895  T
Q  101 tattcttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtc 198  Q
     ||  |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || || | ||||||||||||| ||  ||||||||||||||||||    
T  174896 cataattcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataat-agcttcacagatttcagttaacttcttatataggtc 174994  T
Q  199 tcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgagg 290  Q
    |||||| |||| ||||||||||||| || |||||||||||||||| ||| ||||||||||||||| |||  ||||| |||||||||||||||    
T  174995 tcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgagg 175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 124675 - 124793
Alignment:
Q  59 aataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatct 157  Q
    ||||||||||||| |||||||||||| | |||  ||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||    
T  124675 aataatatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatct 124774  T
Q  158 tattcagcttcacagatta 176  Q
    ||  |||||||||||||||    
T  124775 taaacagcttcacagatta 124793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 121796 - 121835
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagt 41  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  121796 tcatgcagcttagttaaataac-aacaacaacataggcagt 121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38801479 - 38801304
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||| ||||||| |||||||||||||||| |||| |||||||     
T  38801479 tcatgcagcttagttaaataacaaacagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatatacaat 38801380  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  38801379 tattcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaatta 38801304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 27250820 - 27250629
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  27250820 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 27250722  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  27250721 aaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 21714684 - 21714870
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  21714684 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 21714782  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  21714783 actacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggc 21714870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 22468787 - 22468495
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| ||||||||||||||||  ||||||||||||||  ||||||||||   |||||| |||||||||||| ||||||| ||||||||||  ||| |    
T  22468787 tcatgcaacttagttaaataacaat-agcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattc 22468689  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatatagg 196  Q
    ||  ||   |||||||||||| | ||||||||| ||| ||||||| | || || || ||||||  ||||||||||||||| || || |  |||  | |||    
T  22468688 aataatatctcaagtaatgcacataacattatatcacatcataatta-catcagcacatcttaaacagcttcacagattataattaccaacttcaaaagg 22468590  T
Q  197 tctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| || |||||||||||||||||| || | ||| |||||||||| ||| || |  ||||||||||||| |||||| ||||||||||||||||    
T  22468589 tctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggc 22468495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 21026710 - 21026901
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||   || |||||| |||  ||||||||| ||||||| ||||||||||  ||| |    
T  21026710 tcatgcagcttagttaaataacaa-cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattc 21026808  T
Q  98 aaatattcttcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||| |  |||||||||||||||| ||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||| || |||| ||||    
T  21026809 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctctt 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 50210304 - 50210126
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||| | ||| ||| |||||||| | ||||||    
T  50210304 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 50210206  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  50210205 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 50210126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 22354616 - 22354485
Alignment:
Q  46 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa 144  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  145 caacaacatatcttattcagcttcacagatta 176  Q
    || ||||| ||||||  |||||||||||||||    
T  22354516 catcaacacatcttaaacagcttcacagatta 22354485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 20091401 - 20091273
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| |||||||||||||||||| || ||||| |||||||||| ||| || | |||||| |    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatt 20091302  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    |||||| |||||| |||||||||||||||    
T  20091301 tgcactcagttctggaagtgctcgcgagg 20091273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 274
Target Start/End: Original strand, 48603652 - 48603820
Alignment:
Q  107 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 205  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 48603751  T
Q  206 tacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttct 274  Q
    |||| | ||||||||||| || ||| |||||| ||||| ||| ||   |||| ||||||||| ||||||    
T  48603752 tacctaggggtccatctctaatcaattcatgcaacacagatcgcaacatcctaacttgcactcagttct 48603820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 42865139 - 42865010
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 42865040  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  42865039 tgcactcagttctggaagtgctcgcgaggc 42865010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22532299 - 22532473
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||| ||| ||||||| ||||||||||  ||| |    
T  22532299 tcatgcaatttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattc 22532397  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 172  Q
    |   ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  22532398 attcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 22532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 291
Target Start/End: Complemental strand, 21788088 - 21787841
Alignment:
Q  44 acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatat-tcttcaagtaatgcata-aacattataacacttcataat 141  Q
    |||||| |||||| |  |||||||||||||| |||| ||||||||||   || |||  || |||| |||||||||| | |||||||||  || |||||||    
T  21788088 acaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacattatataacatcataat 21787990  T
Q  142 caacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgaca 241  Q
    ||||| |||||| || ||  ||||| || ||||| ||  |||||||||||||||||  ||||| |||||||||||||||||| |||||| | ||||||||    
T  21787989 caacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctctaaacaagttatgcgaca 21787891  T
Q  242 caaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||  || ||  || |||||||||||| ||||||  |||||||||||||||    
T  21787890 caggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggc 21787841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34509810 - 34509988
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||   |||| ||||||||||| ||||||| | ||| ||| ||||||||||  |||||    
T  34509810 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatac 34509908  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||   ||||||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||| ||||||    
T  34509909 attcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagatta 34509988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20135217 - 20135395
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||| |||||  |||| |||||||||  |||||||||||   |||||||||||||||  | ||||||| |||||||||| |||| |    
T  20135217 tcatgcaacttagttaaacaacaat-agcagcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattc 20135315  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||  |  |||||||||||||||| ||||||||| ||  ||||||| |||| ||||| ||||||  |||||||||||||||    
T  20135316 aataaaacttcaagtaatgcatacaacattatatcatatcataatgaacatcaacacatcttaaacagcttcacagatta 20135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 33797573 - 33797694
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 120  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||| |    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 33797671  T
Q  121 aacattataacacttcataatca 143  Q
    ||||||||| ||| | |||||||    
T  33797672 aacattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 22831306 - 22831177
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | |||||| |||||||||||| ||| ||   | |||| |    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaat 22831207  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||  ||||||||||||||||    
T  22831206 tgcactcagttcaggaagtgctcgcgaggc 22831177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21896347 - 21896258
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||  |||| ||||| |||| |||||||| | ||| ||||||||||||    
T  21896347 tcatgcaacttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 6152046 - 6152175
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | || ||| |||||||||||| ||| ||   |||| ||     
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaaca 6152145  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  6152146 tgcattcagttctggaagtgctcgcgaggc 6152175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14295642 - 14295574
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  14295642 tcatgcagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatc 14295574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20918634 - 20918702
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||  || ||||| |||||||||||    
T  20918634 tcatgcagcttagttaaataacaaactgcaacataggcagtatgcaaaccatcatgatataataatatc 20918702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21754075 - 21754145
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaa 69  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||  || ||||| |||| ||||||||    
T  21754075 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcaa 21754145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16758679 - 16758721
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  16758679 tcatgcaacttagttaaataacaaacagcaacataggcagtat 16758721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21861661 - 21861572
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||| |||  ||||||||||||||||||||||||  | |||| ||||| |||| |||||||| | ||| ||||||||||||    
T  21861661 tcatgcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22921960 - 22921918
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  22921960 tcatgcagcttagttaaataacaaacaacaacataggcagtat 22921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33681037 - 33681079
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  33681037 tcatgcaacttagttaaataacaaacagcaacataggcagtat 33681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45574978 - 45574912
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataata 65  Q
    |||||||||||||||||||||| ||||||||||||||||||||   | |||| |||||||||||||||    
T  45574978 tcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataata 45574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 21022830 - 21022958
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||| |||| |||||||||||   || ||||||| || ||||| |||||    | ||||||     
T  21022830 agcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatcacgacattctcacta 21022929  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    | ||| |||||| ||||||||||||||||    
T  21022930 gtactgagttctggaagtgctcgcgaggc 21022958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 433039 - 433157
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||     |||||| ||||||||||||| |||||   |||||||||||||||| | ||| ||| |||||||| |  ||| |    
T  433039 tcatgcagcttagttaaataacg----gcaacacaggcagtatacaaaaacatcaagacataataatatcaaatgcaagtcaacaacatctcaattattc 433134  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  433135 acatataattcaagtaatgcata 433157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35261169 - 35261099
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 69  Q
    |||||||||||||||||  ||||||||||||||||||||||||  | |||| ||||| |||| ||||||||    
T  35261169 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaa 35261099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20847245 - 20847200
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa 47  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20847245 tcatgcagcttagttaaataac-aacagcaacataggcagtacacaa 20847200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22237657 - 22237746
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  22237657 tcatgaagcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22237746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52928061 - 52928019
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  52928061 tcatgcagcttagttaaataacaaacaacaacatagacagtat 52928019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 18182049 - 18181920
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    ||||||||||| || ||  |||||||||||| | ||| ||||| |||| ||| ||||||| | || ||| | |||||||||| ||| ||   |||| |||    
T  18182049 cagcttcacagtttgcagttaacttcttatacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 18181950  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||| ||||    
T  18181949 tgcactcagttctggaagtgctcgcaaggc 18181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21840794 - 21840863
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  21840794 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaa 21840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22123203 - 22123133
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaa 69  Q
    |||||||||||||||||||| |||||||||||| |  |||||||||| ||   |||||||||||||||||||    
T  22123203 tcatgcagcttagttaaatagcaaacagcaacaca-acagtatacaaaaatagcatgacataataatatcaa 22123133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50614208 - 50614167
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  50614208 tcatgcagcttagttaataaacaaacagcaacataggcagta 50614167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50622036 - 50621995
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  50622036 tcatgcagcttagttaataaacaaacagcaacataggcagta 50621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13988893 - 13989013
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  13988893 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 13988990  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  13988991 acatataattcaagtaatgcata 13989013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21475222 - 21475102
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  21475222 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 21475125  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  21475124 acatataattcaagtaatgcata 21475102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21923426 - 21923306
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  21923426 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 21923329  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  21923328 acatataattcaagtaatgcata 21923306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23593870 - 23593750
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  23593870 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 23593773  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  23593772 acatataattcaagtaatgcata 23593750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29776715 - 29776835
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   || ||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  29776715 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaataacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 29776812  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  29776813 acatataattcaagtaatgcata 29776835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16368377 - 16368338
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcag 40  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  16368377 tcatgcagcttagttaataaacaaacagcaacataggcag 16368338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20454644 - 20454606
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcag 40  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  20454644 tcatgcagcttagttaaataac-aacagcaacataggcag 20454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15860144 - 15860078
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatat 66  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||   |||||||||||||||||||||    
T  15860144 tcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacaacatgacataataatat 15860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20248309 - 20248351
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||| |||||||||| |||||||| |||||||||||||||    
T  20248309 tcatgcaacttagttaaaaaacaaacaacaacataggcagtat 20248351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 22356185 - 22356087
Alignment:
Q  80 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 176  Q
    |||||||| ||  ||| |||| ||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22356185 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 22357871 - 22357773
Alignment:
Q  80 tcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 176  Q
    |||||||| ||  ||| |||| ||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22357871 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22357773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26064968 - 26065009
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    ||||||||||||||| |  |||||||||||||||||||||||    
T  26064968 tcatgcagcttagttgataaacaaacagcaacataggcagta 26065009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 5219 - 5044
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  5219 tcatgcagcttagttaaataacaaacatcaacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 5120  T
Q  101 tattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     ||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||||||| |||||| ||||    
T  5119 cattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatatta 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 26854 - 27143
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca-tgac-ataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||| ||| ||||||||||||  |||| |||||||||  |||||||||| | |  ||||| ||||||||| ||||||||||||||||||||||||||    
T  26854 tcatgcatcttggttaaataacaat-agcagcataggcagattacaacaacaatcatgataattatatcaatt-caattcatcaacatcttatgtataca 26951  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtc 198  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||| |||    
T  26952 aatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctcata-acagcttcacagattgcagttaacttcttatatatgtc 27050  T
Q  199 tcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||||||||||||||| |||||||  || ||| ||| ||| || | |||||||||||||| |||||| ||| |||| |||||||    
T  27051 tcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggc 27143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 7e-58; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 37723933 - 37724224
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||| || ||||||||||||||| |   || ||      
T  37723933 tcatgcagcttagttaaataacagacagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcatt 37724032  T
Q  101 tattcttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtc 198  Q
     ||  |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| ||  |  |||||||||||||| ||  ||||||||||||||||||    
T  37724033 cataattcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaa-cagcttcacagattgcagttaacttcttatataggtc 37724131  T
Q  199 tcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||| || |||| ||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| ||||||||||||||||    
T  37724132 tcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggc 37724224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 22032417 - 22032636
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || ||| |||||||||    
T  22032417 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgtat-cagcttcac 22032515  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||||||||||||||||||||||| |||| ||||||||||||| || ||| ||| || ||||| ||||||   | |||||||||||| ||    
T  22032516 agattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactcag 22032615  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  22032616 ttctggaagtgctcgcgaggc 22032636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 21293060 - 21292883
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa-caacatgacataataatatcaat-ttcaa-ttcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| ||  ||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  21293060 tcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatac 21292962  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| || ||||||||||||    
T  21292961 aattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagatta 21292883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23390587 - 23390409
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||   |||||||||||||||||||||||| ||||||||||||||||||  ||| |    
T  23390587 tcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattc 23390489  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  23390488 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 23390409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 71 - 288
Target Start/End: Complemental strand, 18770022 - 18769806
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||||    
T  18770022 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttcac 18769924  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| |||||    | ||||||||| || ||    
T  18769923 agattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctcag 18769824  T
Q  271 ttctagaagtgctcgcga 288  Q
    |||| |||||||||||||    
T  18769823 ttctggaagtgctcgcga 18769806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8286934 - 8286760
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa----catgacataataatatcaatttcaattcatcaacatcttatgtata 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||    ||||||||||||||||||||| ||||||||||||||||||  ||      
T  8286934 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataat 8286836  T
Q  97 caaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 171  Q
    |||| ||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  8286835 caaacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 8286760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 22075049 - 22075240
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||   |||||||||||||||||||||||| ||||||| ||||||||||  ||| |    
T  22075049 tcattcagcttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattc 22075147  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||| |  ||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  |||||||||| |||| || |||| ||||    
T  22075148 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 23572180 - 23572399
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||   ||||| || || ||| ||||||    
T  23572180 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcaacttcac 23572278  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    | ||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||  | ||||||   | |||||||||||| ||    
T  23572279 aaattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacttagatcacaacattctcacttgcactcag 23572378  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||| ||||||||    
T  23572379 ttctggaagtgcgcgcgaggc 23572399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 26704257 - 26704386
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||||||| | || |||||||||||||||| ||||||||||||| |||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26704356  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  26704357 tgcactcagttctggaagtgctcgcgaggc 26704386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 26973990 - 26974119
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||||||| | || |||||||||||||||| ||||||||||||| |||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26974089  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  26974090 tgcactcagttctggaagtgctcgcgaggc 26974119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25421562 - 25421740
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  25421562 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattc 25421660  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25421661 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25421740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25431424 - 25431602
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||| ||| ||||||||||  | | |    
T  25431424 tcatgcatcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttc 25431522  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25431523 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 23201559 - 23201689
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattaccc-aagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcac 260  Q
    |||||||||||||| ||  ||||||||| |||||||||||||| ||||| ||||||||||||| |||||||| |||||||||| ||| || | |||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcac 23201658  T
Q  261 ttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||||| ||||||| |||||||||||||||    
T  23201659 ttgcactcagttctaaaagtgctcgcgaggc 23201689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 21873280 - 21873569
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| ||||||||||||||||| |||| ||||||||| |||||||| ||   |||| | ||||||||||| ||| ||||   ||||||||   || |    
T  21873280 tcatgcaacttagttaaataacaaa-agcagcataggcaggatacaacatcagcatgacttcataatatcaatctcatttca---acatcttaaccattc 21873375  T
Q  98 aaatat-tcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatatag 195  Q
    ||  || |||| |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||    
T  21873376 aataatatctt-aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatatag 21873473  T
Q  196 gtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||| ||||| ||||||||||| |||||| || ||||| |||||||||| ||| || | |||| ||||||||| ||||||  |||||||||||||||    
T  21873474 gtcacattactacccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggc 21873569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24493599 - 24493776
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||| ||||| ||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  24493599 tcatgcagcttggttaagtaacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 24493697  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||| ||||| | ||||||||| ||| |||||||||||| ||||||||||||   ||||||||||||||    
T  24493698 attatacttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagatta 24493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21729155 - 21729032
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||  ||| |    
T  21729155 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattc 21729057  T
Q  98 aaatattcttcaagtaatgcataaa 122  Q
    ||||| |  ||||||||||||||||    
T  21729056 aaataattctcaagtaatgcataaa 21729032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21808480 - 21808357
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||||| ||||||| ||||||||||  ||| |    
T  21808480 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattc 21808382  T
Q  98 aaatattcttcaagtaatgcataaa 122  Q
    ||||| |  ||||||||||||||||    
T  21808381 aaataattctcaagtaatgcataaa 21808357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 9077983 - 9078160
Alignment:
Q  2 catgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||   |||| ||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  9077983 catgcagcttagttaaataac-aacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattataca 9078081  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
       ||   ||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9078082 ttcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9078160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 14079340 - 14079468
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||| |||||| ||||||||||| || ||||| |||||||||| ||| ||   |||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcactt 14079439  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| |||||||||||||||||||||||    
T  14079440 gcactcagttctagaagtgctcgcgaggc 14079468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24529250 - 24529428
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| ||||||||||  |||||    
T  24529250 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatac 24529348  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||   ||||||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  24529349 attcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 24529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 23501273 - 23501145
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| || ||| | || ||||||| ||| ||   | ||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcact 23501174  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    | |||| |||||| |||||||||||||||    
T  23501173 ttcactcagttctggaagtgctcgcgagg 23501145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13025341 - 13025518
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||  || ||||||||| | ||||||| | ||| ||| ||||||||||  ||| ||    
T  13025341 tcatgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattca 13025439  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||| ||||| | | ||||||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13025440 attatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13025518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13095525 - 13095702
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||  || ||||||||| | ||||||| | ||| ||| ||||||||||  ||| ||    
T  13095525 tcatgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattca 13095623  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||| ||||| | | ||||||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13095624 attatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13095702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1096497 - 1096668
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat---acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| ||| |||||   | |||||||| ||||||||||||||| | ||| ||| |||||||| |  |||||    
T  1096497 tcatgcagcttagttaaataac-aacagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatatac 1096595  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttca 169  Q
    |   ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||  ||||||  ||||||||    
T  1096596 attcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttca 1096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 18356367 - 18356488
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcat-aa 121  Q
    ||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||| |||||||||   ||| ||||||||  | ||||||||||| ||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcataaa 18356466  T
Q  122 acattataacacttcataatca 143  Q
    |||||||| ||| | |||||||    
T  18356467 acattatatcacattataatca 18356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21997625 - 21997555
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||    
T  21997625 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaa 21997555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20027032 - 20026942
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaaca----acatgacataataatatcaatttcaattcatcaacatc 87  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |     ||||| ||||||||||||| | ||||||| |||||||    
T  20027032 tcatgcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21329588 - 21329500
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 87  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||| | |||| |||||| | ||||| |||||||||||    
T  21329588 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatc 21329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19660926 - 19660884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19660926 tcatgcagcttagttaaataacaaacagcaacataggcagtat 19660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 20910866 - 20910800
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatctt 89  Q
    ||||||||||||| ||| |||||| || ||||||||||||||||||||||||||||| |||||||||    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 20910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22144079 - 22144168
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||  | |||||||||| |||| |||||||||| ||| ||| ||||||||    
T  22144079 tcatgcagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatct 22144168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22959623 - 22959581
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22959623 tcatgcagcttagttaaataacaaacagcaacataggcagtat 22959581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 23512318 - 23512427
Alignment:
Q  182 aacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtg 281  Q
    |||||||||||||||||  | || |||||||||||||| ||| || ||||| |||||||||| ||| ||   |||| || |||||| |||||| ||||||    
T  23512318 aacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtg 23512417  T
Q  282 ctcgcgaggc 291  Q
    ||||||||||    
T  23512418 ctcgcgaggc 23512427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36314607 - 36314675
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  36314607 tcatgcagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatc 36314675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21565572 - 21565659
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacat 86  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||    
T  21565572 tcatgcagcttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaatgcaagtcatcaacat 21565659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26012126 - 26012056
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaa 69  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||  |||||||| |||| ||||||||    
T  26012126 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaagcaacatgatataacaatatcaa 26012056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 18418613 - 18418699
Alignment:
Q  4 tgcagcttagttaaa-taacaaacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatctta 90  Q
    |||| |||||||||| |||||| || ||||||||||||||||||| || |||||||||||||||||| || ||||||| ||||||||||    
T  18418613 tgcaacttagttaaaataacaa-catcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta 18418699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 22107357 - 22107273
Alignment:
Q  106 ttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||| | ||||  ||||||||||||||| || |||| ||||    
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctctt 22107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29329961 - 29330081
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  29329961 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 29330058  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  29330059 acatataattcaagtaatgcata 29330081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21502247 - 21502205
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  21502247 tcatgcagcttagttaataaacaaacagcaacataggcagtat 21502205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22412214 - 22412302
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||| |||||||||||||||| |  | |||||||||||||||||||  || ||||||||||||||||||| | ||| ||| ||||||||    
T  22412214 tcatgtagcttagttaaataacgataa-caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 22412302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11581334 - 11581265
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaa 69  Q
    |||||||||||||||||||||||| |||||||| |  ||||||||||   ||||||||||||||||||||||    
T  11581334 tcatgcagcttagttaaataacaa-cagcaacacaa-cagtatacaaaaacaacatgacataataatatcaa 11581265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20902144 - 20902075
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  20902144 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaa 20902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 264903 - 264783
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  264903 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 264806  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  264805 acatataattcaagtaatgcata 264783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10733075 - 10732955
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  10733075 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 10732978  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  10732977 acatataattcaagtaatgcata 10732955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20909039 - 20909159
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  20909039 tcatgcagcttagttaaataacaaa-agcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 20909136  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  20909137 acatataattcaagtaatgcata 20909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 39363411 - 39363531
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  39363411 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 39363508  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  39363509 acatataattcaagtaatgcata 39363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18319169 - 18319100
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||   |||| |||||||||||||||||||    
T  18319169 tcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaaacagcatgacataataatatcaa 18319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39245163 - 39245232
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  39245163 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 39245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42245500 - 42245380
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  42245500 tcatgcaacttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 42245403  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  42245402 acatataattcaagtaatgcata 42245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4742 - 4919
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||   ||||||||  | ||||||| ||||||||||| |||||||||||||    
T  4742 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatac 4840  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  4841 aaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagatta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 13 - 143
Alignment:
Q  46 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaac 145  Q
    |||| ||||||||||  | ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  146 aacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||| || ||||||||||||    
T  113 aacaacatatcttatacaacttcacagatta 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20698526 - 20698349
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   |||| |||||||||||||| ||||||||||||||||||| ||| |    
T  20698526 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattc 20698428  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||  ||||| |||||   |||||||||||||||    
T  20698427 aaatattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagatta 20698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13442304 - 13442482
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||  ||| |    
T  13442304 tcatgcagcttagttaaataacaa-cggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattc 13442402  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  13442403 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 13442482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 17487886 - 17488064
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  17487886 tcatgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 17487984  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  ||| |||||||||||    
T  17487985 aaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagatta 17488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 856166 - 856455
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca-tgac-ataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||| ||||||| ||||||||  ||||||||||||||  |||||||||| | |  ||||| ||| ||||| ||||||| ||||||||||||||||||    
T  856166 tcatgcaacttagttgaataacaat-agcaacataggcagattacaacaacaatcatgataattataccaatt-caattcaacaacatcttatgtataca 856263  T
Q  99 aatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtc 198  Q
    | || |||||||||||| |||||||||||||| || ||||| || |||  ||||| || |||  ||||||||||||| ||  ||||||||||||||||||    
T  856264 attaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcatata-agcttcacagattgcagttaacttcttatataggtc 856362  T
Q  199 tcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | |||||||||||| |||||| ||||||||||||||||    
T  856363 tcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggc 856455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 12399239 - 12399417
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||| | ||||||| ||||||||||  ||| |    
T  12399239 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattc 12399337  T
Q  98 aaatattcttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||| |  ||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||   ||||||||||||||    
T  12399338 aaataattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagatta 12399417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 17499368 - 17499546
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  17499368 tcatgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 17499466  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||| ||||||||| ||| ||| |||||||| ||||| ||||||  ||| |||||| ||||    
T  17499467 aaatattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaatta 17499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 14576915 - 14576746
Alignment:
Q  9 cttagttaaataacaaacagcaacataggcagtata--caacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattct 106  Q
    |||||||||||||||| ||||||||||| |||||||  ||||| ||||||||||||||||||||| ||| ||| ||||||||||  ||| ||| ||| ||    
T  14576915 cttagttaaataacaa-cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
Q  107 tcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  || ||||||||||||    
T  14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagatta 14576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 14972884 - 14973062
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||   ||||||||||||||||| | ||| ||| |||||||| || |||||    
T  14972884 tcatgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatac 14972982  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  14972983 attcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 14973062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 17525080 - 17524951
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| || | ||||||||    
T  17525080 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 17524981  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||| | ||||||||||||||||    
T  17524980 tgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26686917 - 26687095
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  26686917 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 26687015  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     | ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  26687016 cattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 26687095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43840962 - 43841140
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||||| |||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  43840962 tcatgcagcttagttaaataacaa-caacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 43841060  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  43841061 aattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 43841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 23083452 - 23083275
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| ||||||||||  ||| |    
T  23083452 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattc 23083354  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 175  Q
    || | | |||| ||||||||| | ||||||||| ||| |||||||||| | ||||| ||||||  ||||||||||||||    
T  23083353 aattttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagatt 23083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 14179570 - 14179687
Alignment:
Q  107 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 205  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 14179669  T
Q  206 tacccaagggtccatctc 223  Q
    |||||| |||||||||||    
T  14179670 tacccaggggtccatctc 14179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 291
Target Start/End: Original strand, 23408581 - 23408752
Alignment:
Q  119 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 218  Q
    ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||| | ||||||  || || |||||||||||||    
T  23408581 taaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtcc 23408679  T
Q  219 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| || ||||| |||||||||| ||| || | ||||||||||||||||||||| ||||||||||||||||    
T  23408680 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggc 23408752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 24153299 - 24153122
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| |  ||||||||||| |||||||||  || ||||||||||||||||||| | ||| ||| ||||||||||  ||| ||    
T  24153299 tcatgcagcttagttaaataacgat-agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 24153201  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||| ||||||| | ||||| ||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  24153200 attatacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 24153122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18438564 - 18438742
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||   |||| ||||| ||||||||||||| | ||| ||| ||||||||| | |||||    
T  18438564 tcatgtagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatac 18438662  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||   |||||||||||||| ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  18438663 attcatatctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 18438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 15877727 - 15877627
Alignment:
Q  191 tataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgagg 290  Q
    |||||||||||||| |||||||||||||||||| || ||||| |||||||||  ||| || | |||||||||||||| |||||| |||||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgagg 15877628  T
Q  291 c 291  Q
    |    
T  15877627 c 15877627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 14572619 - 14572796
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||  |||| |||||||||||||||||||||   | ||| ||||||||||  ||| ||    
T  14572619 tcatgcagcttagttaaataac-aacagcaacatagacagtatacaaaacagcatgacataataatatcaattgagagtcaacaacatcttaaatattca 14572717  T
Q  99 aatattcttcaagtaatg-cataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||| |||||  | |||||||||| ||| |||||| |||||  |||| ||||||  || ||||||| ||||    
T  14572718 attatacttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaatta 14572796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11424850 - 11424676
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||| |||||||||  |||   |||||||||| |  ||| ||    
T  11424850 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattatgca 11424755  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
       ||  |||||||||||| || ||||||||| ||| |||||| ||||  ||||| ||||||  |||||||||||||||    
T  11424754 ttcataattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagatta 11424676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 42386440 - 42386619
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||   |||| |||||||||| |||||||| | ||| ||| |||||||| |  ||| |    
T  42386440 tcatgcagtttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattc 42386538  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 176  Q
    |   ||  |||||| |||||||| ||||||||| ||| |||||||||||| ||| | ||||| |  |||||||||||||||    
T  42386539 attcataattcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagatta 42386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 23077406 - 23077277
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||| ||||||   ||||||| ||||||||||||||| |||| ||||||||||||| || ||||| |||||||||| ||| ||   |||||| |    
T  23077406 cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgcaaaatcctcaat 23077307  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    || | |  ||||| ||||||||||||||||    
T  23077306 tgaaatcggttctggaagtgctcgcgaggc 23077277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 15051707 - 15051835
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||| ||| ||  |||| ||||||||||||| || || |||| ||||||||||| | || ||| |||||||||||| ||||||   |||| ||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaactt 15051806  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||| | ||| |||||||||||||||||||    
T  15051807 gcattcagtcctagaagtgctcgcgaggc 15051835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 25476476 - 25476299
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||| ||||| |||||||| ||| ||||||||| ||||   ||||||||||||||||| | ||| ||| |||||||| | ||||||    
T  25476476 tcatgtagcttagttaaaaaacaa-cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 25476378  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 175  Q
    |   ||  ||||||||||||  | ||||||||| ||| |||| |||| || ||||| ||||||  ||||||||||||||    
T  25476377 attcataattcaagtaatgcgcataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatt 25476299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12174350 - 12174308
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12174350 tcatgcagcttagttaaataacaaacagcaacataggcagtat 12174308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15470954 - 15471043
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  15470954 tcatgcagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32307707 - 32307749
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32307707 tcatgcagcttagttaaataacaaacagcaacataggcagtat 32307749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49668167 - 49668125
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  49668167 tcatgcagcttagttaaataacaaacagcaacataggcagtat 49668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13210418 - 13210350
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||  || ||||| |||||||||||    
T  13210418 tcatgcagcttagttaaataacaaatagcaacataggcagtatgcaaaccatcatgatataataatatc 13210350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14234517 - 14234605
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 87  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  14234517 tcatgcagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 14234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 40213811 - 40213634
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||||| || ||||| || |||||||||   ||| ||||||||||||||||||| | ||| ||| |||||||| |  |||||    
T  40213811 tcatgtagcttagttaaataacaa-catcaacacag-cagtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatac 40213714  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  | |||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||||||||    
T  40213713 attcataatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagatta 40213634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 16909941 - 16910069
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||| ||  |||| |||| |||||||| ||||| |||| ||||||||||| | || ||| ||| || ||||| ||||     | |||||||    
T  16909941 agcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcatgacattctcactt 16910040  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||||| |||||||||||||||||||||||    
T  16910041 gcactcagttctagaagtgctcgcgaggc 16910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9512950 - 9512992
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  9512950 tcatgcagcttagttaaacaacaaacagcaacataggcagtat 9512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9520925 - 9520967
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  9520925 tcatgcagcttagttaaacaacaaacagcaacataggcagtat 9520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27165277 - 27165366
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||||| |||| ||||||  | |||||||||| |||  |||||||| | ||| ||||||| ||||    
T  27165277 tcatgcagcttagttaaataacaaacagcaatatagacagtatgcaaaacaacatgatataccaatatcaaatgcaagtcatcaatatct 27165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52523820 - 52523778
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  52523820 tcatgcagcttagttaaataacaaacaacaacataggcagtat 52523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 14878433 - 14878304
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaaggg-tccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    ||||||||||||| ||  |||||||||||||| ||| ||||| |||| | ||| |||||||| || ||||| |||||||||| ||| || | |||||| |    
T  14878433 agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaat 14878334  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
     |||||  ||||| ||||||||| ||||||    
T  14878333 cgcactcggttctggaagtgctctcgaggc 14878304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24340814 - 24340746
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| |||||||||| |||||||  |||||| ||||| |||||||||||    
T  24340814 tcatgcagcttagttaattaacaatcagcaacatatgcagtatgcacaacatcatgatataataatatc 24340746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 9707742 - 9707622
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  9707742 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatacaagtcaacaacgtctcaattattc 9707645  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  9707644 acatataattcaagtaatgcata 9707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 15060483 - 15060611
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||| ||  || | ||||||||||||| || || |||| ||||||||||| | || ||| |||||||||||| ||| ||   |||| ||||    
T  15060483 agcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaactt 15060582  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||| | ||| || ||||||||||||||||    
T  15060583 gcaatcagtcctggaagtgctcgcgaggc 15060611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29172718 - 29172598
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  29172718 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 29172621  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  29172620 acatataattcaagtaatgcata 29172598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 50242849 - 50242969
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | | |||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  50242849 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctcaattattc 50242946  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  50242947 acatataattcaagtaatgcata 50242969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 53070788 - 53070668
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||   ||||||| |||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  53070788 tcatgcagcttagttaaataac-aacagcaacata-acagtatacaaaaacaacaagacataataatatcaaatgcaagtcaacaacgtctcaattattc 53070691  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  53070690 acatataattcaagtaatgcata 53070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28194720 - 28194755
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatag 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  28194720 tcatgcagcttagttaaataacaaacagcaacatag 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37251259 - 37251216
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  37251259 tcatgcagcttagttaataaacaaacagcaacataggcagtata 37251216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 53301634 - 53301572
Alignment:
Q  9 cttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||||||||| ||||||  | |||||||||| |||| ||||||||    
T  53301634 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaa 53301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16097358 - 16097396
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggca 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16097358 tcatgcagcttagttaaataacaaacaacaacataggca 16097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16103810 - 16103852
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  16103810 tcatgcagcttagttaaacaacgaacagcaacataggcagtat 16103852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36166625 - 36166712
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||  |||| ||||||||||||||||||| | ||| ||| ||||||||    
T  36166625 tcatgcagcttagttaaataac-aacagcgacaca-gcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 36166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46822295 - 46822386
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata---caacaacatgacataataatatcaatttcaattcatcaacatctta 90  Q
    ||||||| |||||||||||||| || |||| |||||||||  ||   |||||||| ||||||| |||||||||| ||||||| ||||||||||    
T  46822295 tcatgcaacttagttaaataac-aatagcagcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatctta 46822386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 11862981 - 11863038
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcca 219  Q
    |||||||||||||| |||||||| ||||| ||||||| ||||| |||| |||||||||    
T  11862981 cagcttcacagatttcaaataacatcttaaataggtcacattaatacctaagggtcca 11863038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12511087 - 12511177
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata---caacaacatgacataataatatcaatttcaattcatcaacatctt 89  Q
    ||||||| |||||||||||||| || |||| |||||||||  ||   |||||||| ||||||| |||||||||| ||||||| |||||||||    
T  12511087 tcatgcaacttagttaaataac-aatagcagcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatctt 12511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17672653 - 17672722
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||   |||| |||||||||||||||||||    
T  17672653 tcatgcagcttagttaaataac-aacaacaacata-gcagtatacaaaaacagcatgacataataatatcaa 17672722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22110443 - 22110402
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  22110443 tcatgcagcttagttaataaacaaacagcaacataggcagta 22110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23274717 - 23274785
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  23274717 tcatgcaacttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 23274785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43550614 - 43550544
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaa 69  Q
    |||||||||||||||||||||  | |||||||||| ||||||| |||   ||||||||||||||||||||||    
T  43550614 tcatgcagcttagttaaataatga-cagcaacatatgcagtatgcaaaaacaacatgacataataatatcaa 43550544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43925988 - 43926029
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  43925988 tcatgcagcttagttaataaacaaacagcaacataggcagta 43926029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7781482 - 7781362
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  7781482 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattc 7781385  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  7781384 acatataattcaagtaatgcata 7781362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8899121 - 8899241
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  8899121 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 8899218  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  8899219 acatataattcaagtaatgcata 8899241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12567587 - 12567707
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | ||| |||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  12567587 tcatgcagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 12567684  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  12567685 acatataattcaagtaatgcata 12567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13544052 - 13544172
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | ||| |||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  13544052 tcatgcagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 13544149  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  13544150 acatataattcaagtaatgcata 13544172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17446790 - 17446670
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  17446790 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 17446693  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  17446692 acatatcattcaagtaatgcata 17446670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17463205 - 17463325
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  17463205 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 17463302  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  17463303 acatataattcaagtaatgcata 17463325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 28848746 - 28848626
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  28848746 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 28848649  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  28848648 acatataattcaagtaatgcata 28848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34159353 - 34159473
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  34159353 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 34159450  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  34159451 acatataattcaagtaatgcata 34159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38962026 - 38961906
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  38962026 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 38961929  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  38961928 acatataattcaagtaatgcata 38961906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45607042 - 45606922
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  45607042 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 45606945  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  45606944 acatataattcaagtaatgcata 45606922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 55476518 - 55476638
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  55476518 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 55476615  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  55476616 acatataattcaagtaatgcata 55476638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 606417 - 606378
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcag 40  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  606417 tcatgcagcttagttaataaacaaacagcaacataggcag 606378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 16796685 - 16796755
Alignment:
Q  107 tcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||||||| ||||||  || ||||||| ||||    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatatta 16796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21618476 - 21618563
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac--aacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||| |||||| ||| |  ||||||||  |||| ||||||||||||||||||| | ||| ||| ||||||||    
T  21618476 tcatgcagcttagttaaataac-aacagcgacaca-acagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 21618563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 55500969 - 55501055
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacat 86  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| ||||||    
T  55500969 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacat 55501055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6469269 - 6469200
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  6469269 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 6469200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16454416 - 16454296
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  16454416 tcatgcaacttagttaaataacaa-cagcaacacaa-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 16454319  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  16454318 acatataattcaagtaatgcata 16454296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13241 - 13419
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  13241 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 13339  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  13340 aaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaatta 13419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 1139 - 949
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||   ||||||||||||||||||||| ||||||||||||||||||  ||| |    
T  1139 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 1041  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  1040 aaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1881 - 2059
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||   |||||||||||||||||||||||| ||||||||||||||||||  ||| |    
T  1881 tcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattc 1979  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  1980 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 168069 - 167879
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa---catgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||   ||||||||||||||||||||| ||||||||||||||||||  ||| |    
T  168069 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 167971  T
Q  98 aaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  167970 aaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 51943 - 52121
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| |    
T  51943 tcatgcagcttagttaaataacaa-cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 52041  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    || ||| |||||||||||||| | ||||||||| |||  ||||||| ||| ||||| ||||||  |||||||||||||||    
T  52042 aattatacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagatta 52121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 1977 - 2196
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||  ||||   ||||| || || ||||||||||    
T  1977 ttcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttcac 2075  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| |||| |   | |||||||||||| ||    
T  2076 agattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactcag 2175  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  2176 ttctcgaagtgctcgcgaggc 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 291
Target Start/End: Complemental strand, 21824 - 21605
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||||    
T  21824 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 21726  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||| ||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | |||||||||||| ||    
T  21725 agattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcag 21626  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  21625 ttctggaagtgctcgcgaggc 21605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 291
Target Start/End: Complemental strand, 29716 - 29497
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||||    
T  29716 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 29618  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    ||||| ||  |||| ||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | |||||||||||| ||    
T  29617 agattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcag 29518  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  29517 ttctggaagtgctcgcgaggc 29497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 36592 - 36778
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||| ||||||||||||    
T  36592 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttaaataggtctcatt 36690  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | ||||||||||||| |||| ||||||||||||||||||| |||  |||||||||||||||||| |||||||||||||||||||||||    
T  36691 actacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggc 36778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 291
Target Start/End: Original strand, 12859 - 13078
Alignment:
Q  71 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcac 170  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||  |||||| || |||| ||||||||    
T  12859 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttcac 12957  T
Q  171 agattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaag 270  Q
    | ||| ||  |||||||||||||||||||||||| |||| |||||||||||   || ||| ||| || || || ||||||   | |||| ||||||| ||    
T  12958 aaattgcagttaacttcttatataggtctcattactacctaagggtccatccataatcaattcaagcaactcatatcacaacattctcatttgcactcag 13057  T
Q  271 ttctagaagtgctcgcgaggc 291  Q
    |||| ||||||||||||||||    
T  13058 ttctggaagtgctcgcgaggc 13078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11315 - 11435
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  11315 tcatgcaacttagttaaataac-aacagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 11412  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  11413 acatatgattcaagtaatgcata 11435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4879 - 5057
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||| | ||||||| |||||||||| |||| |    
T  4879 tcatgcagattagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattc 4977  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||| |  ||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  4978 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagatta 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3500 - 3678
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||| ||||   ||||||||||||||||||| ||||||||||||||||||  ||| |    
T  3500 tcatgtagcttagttaaataactaa-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 3598  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  3599 aaatattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 373 - 543
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa--catgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||| |   |||||| ||||||||||||||  || ||| ||||||||||  ||| |     
T  373 tcatgcagcttagttaaataacaa-caataacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcg 471  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttca 169  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||    
T  472 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttca 543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 24394 - 24214
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa----caacatgacataataatatcaatttcaattcatcaacatcttatgtata 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    || |||||||||| |||||||||| ||||||||||||||||||  |||     
T  24394 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatatt 24296  T
Q  97 caaatattcttcaagtaatgcata-aacattataacacttcataa-tcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||| |||||| ||||| ||||||  |||||||||||||||    
T  24295 caaatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagatta 24214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 34838 - 34709
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||||||||||||||||| |||||| | ||| |||| |  || || | | ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcact 34739  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  34738 tgcactcagttctggaagtgctcgcgaggc 34709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 20117 - 20303
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  ||||||||||| || ||  |||||||||||||||||||||||    
T  20117 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacaggttgcagttaacttcttatataggtctcatt 20215  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||||| | || |||||||||||||||| || ||||| |||||||||||||| |||||| ||||||||||||||||    
T  20216 actacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggc 20303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38346 - 38389
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  38346 tcatgcagcttagttaatgaacaaacagcaacataggcagtata 38389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6215 - 6039
Alignment:
Q  1 tcatgcagcttagttaaataacaa--acagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtat 95  Q
    ||||||||||||||||||||||||  ||| ||||||||| ||||||||| ||||   |||||| |||||||||||| ||||||||||||||||||  |||    
T  6215 tcatgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatat 6116  T
Q  96 acaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 171  Q
     |||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  6115 tcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1982 - 2160
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||||||  ||| |    
T  1982 tcatgcagcttagttaattaacaa-cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattc 2080  T
Q  98 aaatattcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    ||| ||| |||||||||||||| |||||||||| | | |||||||||||||||||||||| ||| |||||| ||| ||||    
T  2081 aaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatatta 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 15597 - 15468
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| || ||||| | |||||||| |||||| | ||||||||    
T  15597 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcact 15498  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||||||||||||||||| |||||||||    
T  15497 tgcactaagttctagaagtgatcgcgaggc 15468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 20946 - 21132
Alignment:
Q  7 agcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatat 103  Q
    ||||||||||| |||||| |||||||||||||| ||| |||   |||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||| |    
T  20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgt 21045  T
Q  104 tcttcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    ||| |||||||||||| |||||||||| ||| ||||||||| || ||||| ||||||  ||||||||||| ||| || |||| ||||    
T  21046 tctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatctt 21132  T

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Target: scaffold0004 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 69930 - 70116
Alignment:
Q  106 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 203  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 70028  T
Q  204 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| ||||||||||||||||    
T  70029 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggc 70116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 8885 - 8756
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||||||  || || | ||||||||    
T  8885 cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcact 8786  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  8785 tgcactcagttctggaagtgctcgcgaggc 8756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3241 - 3068
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  3241 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 3143  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 172  Q
       ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||    
T  3142 ttcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 6669 - 6826
Alignment:
Q  31 acataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcat-aaacatt 126  Q
    |||||||||||||||||   |||||||||||||| ||||||||  ||||||| ||||||||||  ||| |||| ||| |||||||||||||| |||| ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  127 ataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataac 184  Q
    ||| ||| |||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataac 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32972 - 33149
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| | | ||||||||||  ||| ||    
T  32972 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattca 33070  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  33071 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 33149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 38791 - 38968
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||  || ||||||||||||||||||| | ||| | | ||||||||||  ||| ||    
T  38791 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattca 38889  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  38890 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 38968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9776 - 9845
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaac---atgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||| |||   ||||||||||||||||||    
T  9776 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagaatgacataataatatcaa 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 1550 - 1660
Alignment:
Q  181 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 280  Q
    ||||||||||||||||||||| || |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| |||||    
T  1550 taacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagt 1649  T
Q  281 gctcgcgaggc 291  Q
    |||||||||||    
T  1650 gctcgcgaggc 1660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 15694 - 15759
Alignment:
Q  4 tgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||||    
T  15694 tgcagcttagttaaataacaaacagcaacataggcagtatacaaaccatcatgatataataatatc 15759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 8620 - 8446
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||    ||||||||||||||||  | |||| ||||||||||||||||||||| ||| ||| || |||||||  ||| ||    
T  8620 tcatgcagcttagttaaataaca----gcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 8525  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  8524 attatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22913 - 23098
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||| |  |||||||||| ||||   ||||||||||||||||| | ||| ||| ||||||||||  ||| |    
T  22913 tcatgcagcttagttaaataacaa-cagcaacacac-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattc 23010  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataac 184  Q
    || ||| |||||||||||||| | ||||||||| ||| || ||||||||| ||||| ||||||  ||||||||||||||| |||||||    
T  23011 aattatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagattataaataac 23098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 18381 - 18252
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||| |||||| ||||||||||| || ||||| |||||||||||||| || | ||||||||    
T  18381 cagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcact 18282  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  18281 tgcactcagttctggaagtgctcgcgaggc 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 18431 - 18560
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| || | ||||||||    
T  18431 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcact 18530  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| |||| ||||| |||||    
T  18531 tgcactcagttctggaagcgctcgtgaggc 18560  T

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Target: scaffold0023 (Bit Score: 65; Significance: 1e-28; HSPs: 8)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 286
Target Start/End: Complemental strand, 38525 - 38283
Alignment:
Q  44 acaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatat-tcttcaagtaatgcata-aacattataacacttcataat 141  Q
    ||||||||||||| |  |||||||||||||| |||| ||||||||||   || |||  || |||| |||||||||| | ||| ||||| ||| ||||| |    
T  38525 acaacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatcacatcatatt 38427  T
Q  142 caacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgaca 241  Q
    |||||  ||||| || ||  |||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||| ||| || ||||| ||||||||    
T  38426 caacattaacatttcataa-cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaattatgcgaca 38328  T
Q  242 caaatcacattttcctcacttgcactaagttctagaagtgctcgc 286  Q
    || ||| ||   | |||||||||||| |||||| |||||||||||    
T  38327 cagatcgcaaagttctcacttgcacttagttctggaagtgctcgc 38283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 291
Target Start/End: Complemental strand, 23711 - 23466
Alignment:
Q  45 caacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatat-tcttcaagtaatgcata-aacattataacacttcataatc 142  Q
    |||||||||||| |  |||||||||||||| |||| ||||||||||   || |||  || |||| |||||||||| | ||| ||||| ||| ||||| ||    
T  23711 caacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatcacatcatattc 23613  T
Q  143 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacac 242  Q
    ||||  ||||| || ||  |||||||||||||| ||| ||||||||| |||||||| ||||| |||||||||||||| |   || ||||| ||||||||     
T  23612 aacattaacatttcataa-cagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatcaaattatgcgacaa 23515  T
Q  243 aaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    | ||| ||   | |||||||||||| |||||||||||||||||||||||    
T  23514 agatcgcaaagttctcacttgcactcagttctagaagtgctcgcgaggc 23466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 100404 - 100493
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| ||||||||||| | | ||| ||| ||||||||    
T  100404 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaatgcaaatcaacaacatct 100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 119905 - 119947
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  119905 tcatgcagcttagttaaataacaaacagcaacataggcagtat 119947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40265 - 40224
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  40265 tcatgcagcttagttaaataataaacagcaacataggcagta 40224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 101529 - 101571
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  101529 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 101571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17575 - 17455
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| || ||||||| | |||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  17575 tcatgcagcttagttaaataac-aatagcaacaca-gcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 17478  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  17477 acatataattcaagtaatgcata 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 94438 - 94558
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  94438 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 94535  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  94536 acatataattcaagtaatgcata 94558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 340038 - 339863
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||  || |||||||||||||||||||  |||||||||||||||||||||| | ||| ||| |||||||| | |||||||    
T  340038 tcatgcagcttagttaaataaca--caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtataca 339942  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
       ||  |||||||||||  || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  339941 ttcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 339863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 71353 - 71474
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 120  Q
    ||||||||||||||||| |||||| || |||||||||||| |||||||||||||||| |||||||||  |||| ||||| |||||| | ||||||||| |    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 71451  T
Q  121 aacattataacacttcataatca 143  Q
    ||||||||| ||| | |||||||    
T  71452 aacattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 158585 - 158465
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  158585 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 158488  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  158487 acatataattcaagtaatgcata 158465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39507 - 39684
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| || |||||||||||||||||||  || ||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  39507 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 39605  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
       ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  39606 ttcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 39684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 75305 - 75128
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| || |||||||||||||||||||  || ||||||||||||||||||| | ||| ||| |||||||| |  ||||||    
T  75305 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 75207  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
       ||  ||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  75206 ttcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 75128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28444 - 28552
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||||   |||||||||||||||||||||||| ||||||| ||||||||||| ||| |    
T  28444 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattc 28542  T
Q  98 aaatattctt 107  Q
    |||| |||||    
T  28543 aaatgttctt 28552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11322 - 11390
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||||||||||    
T  11322 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatc 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2027 - 2095
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||  || ||||| |||||||||||    
T  2027 tcatgcagcttagttaaataacaaacacaaacataggcagtatgcaaaccatcatgatataataatatc 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 13141 - 13313
Alignment:
Q  21 acaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgc 117  Q
    ||||||||||||||||||||||||||| ||||   ||||||||||||||||||| ||| ||| || |||||||  ||| ||| ||| |||||||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  118 ata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 189  Q
    | | ||||||||| |||  ||||||||||| ||||| ||||||  ||| ||||||||||| || |||| ||||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatctt 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34153 - 34221
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||  || ||||| |||||||||||    
T  34153 tcatacagcttagttaaataacaaacaacaacataggcagtatacaacccatcatgatataataatatc 34221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 65702 - 65592
Alignment:
Q  181 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 280  Q
    |||||||||||||||||||||||| |||||||||||||||||| || ||||| |||||||| | ||| || | |||||||||||||| |||||| |||||    
T  65702 taacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaagt 65603  T
Q  281 gctcgcgaggc 291  Q
    |||| ||||||    
T  65602 gctcacgaggc 65592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20513 - 20394
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| |||||||| |  ||||||||||  |||||||||||||||||||||| | ||| ||| |||| ||| |  ||| ||    
T  20513 tcatgcagcttagttaaataacaa-cagcaacacat-cagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 20416  T
Q  99 aatattcttcaagtaatgcata 120  Q
     ||||  |||||||||||||||    
T  20415 catataattcaagtaatgcata 20394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 128827 - 128897
Alignment:
Q  46 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatg 116  Q
    |||| ||||||||||||||||||| | ||| ||| ||||||||||  ||| ||| ||| ||||||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatg 128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3277 - 3103
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||| ||||||||||||| |  |||||| |||||||| | ||||||    
T  3277 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatac 3179  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 172  Q
    |   ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  3178 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 26156 - 25978
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||||||||| |  |||||| |||| ||| | ||||||    
T  26156 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatac 26058  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |   ||  |||||||||||| |  ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  26057 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 25978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44798 - 44709
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||| |||||||||| |||||||||||   |||| ||||||||||||||||||| | ||| ||| ||||||||    
T  44798 tcatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 33047 - 32901
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||  || ||||||||||||||||||||| ||||||| ||||||||||  ||| |     
T  33047 tcatgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc- 32950  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaaca 146  Q
    | ||| |||| ||||||||||| ||||||||||||| |||| |||||||    
T  32949 attatacttcgagtaatgcatataacattataacacatcatgatcaaca 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 45958 - 46104
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||  || ||||||||||||||||||||| ||||||| ||||||||||  ||| |     
T  45958 tcatgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc- 46055  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaaca 146  Q
    | ||| |||| ||||||||||| ||||||||||||| |||| |||||||    
T  46056 attatacttcgagtaatgcatataacattataacacatcatgatcaaca 46104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16143 - 16193
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca 52  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  16143 tcatgcagcttagttaaataac-aacaacaacataggcagtatacaaaaaca 16193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 48388 - 48259
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| |||||| ||| || | | || |||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttact 48289  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  48288 tgcactcagttctggaagtgctcgcgaggc 48259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19294 - 19336
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19294 tcatgcagcttagttaaataacaaacagcaacataggcagtat 19336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25926 - 26103
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa--catgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||| |   ||||||||||||||||||| | ||| | | |||||||| |  ||| ||    
T  25926 tcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattca 26024  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||||  ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  26025 attatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 26103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39888 - 40065
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa--catgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||| |   ||||||||||||||||||| | ||| | | |||||||| |  ||| ||    
T  39888 tcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattca 39986  T
Q  99 aatattcttcaagtaatgca-taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||| ||||    
T  39987 attatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaatta 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11534 - 11447
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaacat 86  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  11534 tcatgcagcttagttaaataacaa-caacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 773 - 902
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| |||| ||||||||||||| || ||||| |||||||||| ||| || | |||||| |    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatt 872  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    | |||| |||||| ||||||||| ||||||    
T  873 tacactcagttctggaagtgctcacgaggc 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 10630 - 10543
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  10630 atgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 3933 - 4061
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||| ||| ||| ||   ||||||||    
T  3933 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 4031  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  4032 tgcactcagttctggaagtgctcgcgaggc 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 8364 - 8492
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||| ||| ||| ||   ||||||||    
T  8364 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 8462  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  8463 tgcactcagttctggaagtgctcgcgaggc 8492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29959 - 30028
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| |||||||||||||||||||    
T  29959 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaa 30028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17308 - 17128
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaa-----catgacataataatatcaatttcaattcatcaacatcttatgtat 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||     ||||||||||||||||||| | ||| ||| |||||||| | ||||    
T  17308 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtat 17210  T
Q  96 acaaatattcttcaagtaatgc-ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||   ||  ||||||||||||  | ||||||||| ||| |||||||||||| |||||  |||||  |||||| ||||||||    
T  17209 acattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagatta 17128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 1155 - 1031
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    ||||||||| |||| ||  ||||||||||||||||||  |||| ||||||||| |||||||| || ||||| |||||||||| ||| || | ||||||||    
T  1155 cagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcact 1056  T
Q  262 tgcactaagttctagaagtgctcgc 286  Q
    |||||| |||||| |||||||||||    
T  1055 tgcactcagttctggaagtgctcgc 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 16330 - 16148
Alignment:
Q  109 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattatta 207  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||||||  |||| ||    
T  16330 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattacta 16232  T
Q  208 cccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||||||||| ||| || ||||| |||||||||| ||| ||    ||||||||||||| | |||| ||||||||||||||||    
T  16231 cccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggc 16148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39943 - 40120
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||  |||||||||||||||||||||| | ||  |||  |||||||||  |||       
T  39943 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttg 40041  T
Q  99 aatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    | ||| |||||||||||||| | ||||||||| ||| |||||||||||| ||||| ||| ||   ||||||||||||||    
T  40042 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagatta 40120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 18584 - 18455
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| | | || ||||| | |||    | ||||||    
T  18584 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatcccaaatcaattgaagcaacacagaacacgacattctcact 18485  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  18484 tgcactcagttctggaagtgctcgcgaggc 18455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19976 - 19933
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||| ||||  |||||||||||||||||||||||||    
T  19976 tcatgcagcttaattaataaacaaacagcaacataggcagtata 19933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 14863 - 14992
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| |||||| | ||||||||| || ||||| |||||||||| ||  || | ||||||||    
T  14863 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcact 14962  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
     ||||| |||||| ||||||||||||||||    
T  14963 ggcactcagttctggaagtgctcgcgaggc 14992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 23878 - 24007
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| |||||| | |||||||||  | ||||| |||||||||| ||  || | ||||||||    
T  23878 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 23977  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
     ||||| |||||| ||||||||||||||||    
T  23978 ggcactcagttctggaagtgctcgcgaggc 24007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 39302 - 39431
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| |||||| | |||||||||  | ||||| |||||||||| ||  || | ||||||||    
T  39302 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 39401  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
     ||||| |||||| ||||||||||||||||    
T  39402 ggcactcagttctggaagtgctcgcgaggc 39431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 4544 - 4715
Alignment:
Q  8 gcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatacaaatatt 104  Q
    ||||||||||||||||| |||||||| | |||||||| || ||||   ||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||     
T  4544 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 4642  T
Q  105 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  4643 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 12126 - 12297
Alignment:
Q  8 gcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatacaaatatt 104  Q
    ||||||||||||||||| |||||||| | |||||||| || ||||   ||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||     
T  12126 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 12224  T
Q  105 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12225 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 22078 - 22249
Alignment:
Q  8 gcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatacaaatatt 104  Q
    ||||||||||||||||| |||||||| | |||||||| || ||||   ||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||     
T  22078 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 22176  T
Q  105 cttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
     |||||||||||| || ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22177 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16691 - 16516
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| ||||||||||||||||||| |  || ||| || ||||| | ||||||    
T  16691 tcatgcagcttagttaaataac-aacagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatac 16593  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacaga 173  Q
    |   ||  |||||||||||| || ||||||||| ||| ||| |||||||| ||||| ||||||  ||||||||||||    
T  16592 attcataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacaga 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 6294 - 6422
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  ||||||||| ||||||| || ||| |||||| || |||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  6294 cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcact 6393  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    |||||  |||||| |||||||||||||||    
T  6394 tgcacacagttctggaagtgctcgcgagg 6422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 23995 - 24094
Alignment:
Q  121 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccat 220  Q
    ||||||||| ||| ||||| ||||||  ||||| |||||  |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||    
T  23995 aacattatatcacatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 46655 - 46527
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||| ||| ||||||| | || ||| | |||||||||| ||| ||   |||| |||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 46556  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    |||||| |||||| |||||||||||||||    
T  46555 tgcactcagttctggaagtgctcgcgagg 46527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 8509 - 8682
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaaca---tgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||| ||||||||||||  ||||||||||| ||||||||| ||||   ||||||||||||||||||| ||| ||| ||||||||||   || |    
T  8509 tcatgcagcttggttaaataacaat-agcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaacatcttaaacattc 8607  T
Q  98 aaatattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 175  Q
    || | | |||||||||||||| | |||||||    || |||||||||||| ||||| ||| ||  ||||||||||||||    
T  8608 aagtgtacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagatt 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1062 - 1151
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||| ||||| |||| |||||||| | | | ||||||||||||    
T  1062 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8496 - 8613
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||  || ||||| |||| |||||||| | ||| |||||||||||| |  ||| ||    
T  8496 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatattca 8595  T
Q  99 aatattcttcaagtaatg 116  Q
     ||||  |||||||||||    
T  8596 tatataattcaagtaatg 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6565 - 6607
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6565 tcatgcagcttagttaaataacaaacagcaacataggcagtat 6607  T

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Target: scaffold0107 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 15483 - 15362
Alignment:
Q  24 aacagcaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaat-attcttcaagtaatgcat-a 120  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||||||||| |||||||||   ||| ||||| |||||| ||||||||||| |    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 15385  T
Q  121 aacattataacacttcataatca 143  Q
    ||||||||| ||| | |||||||    
T  15384 aacattatatcacattataatca 15362  T

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Target: scaffold0075 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 53640 - 53551
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||||||||||||  | |||||||||| |||| |||||||| | ||| ||||||||||||    
T  53640 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 53551  T

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Target: scaffold0311 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 7006 - 6877
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||| ||||| ||||| | || ||| |||||||||||| ||| ||   | |||| |    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaat 6907  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  6906 tgcactcagttctggaagtgctcgcgaggc 6877  T

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Target: scaffold0111 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 32626 - 32754
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||| | ||| | ||||| | ||| |||||| ||||||| ||| |||||||| |||||||||| ||| |  | ||||||||    
T  32626 cagcttcacagattgcaattaacattttaaa-aggtcactttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcact 32724  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||| |||||| ||||||||||||||||    
T  32725 tgcactcagttctggaagtgctcgcgaggc 32754  T

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Target: scaffold0324 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 15642 - 15721
Alignment:
Q  212 agggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 291  Q
    |||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| ||||||||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggc 15721  T

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Target: scaffold0628 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2897 - 2808
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||  || ||||| |||| |||||||| | ||| ||| ||||||||    
T  2897 tcatgcagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatct 2808  T

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Target: scaffold0074 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38793 - 38704
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||| |||||||||||||||||||||||||||| ||||||  | |||||||||| |||| |||||||| | ||| ||||||| ||||    
T  38793 tcatgcaccttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatct 38704  T

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Target: scaffold0184 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1160 - 1092
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatc 67  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||  || ||||| |||||||||||    
T  1160 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatc 1092  T

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Target: scaffold0716 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4721 - 4841
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  4721 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 4818  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  4819 acatataattcaagtaatgcata 4841  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32566 - 32636
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 69  Q
    |||||||||||||||||  ||||||||||||||||||||||||  | |||||||||| |||| ||||||||    
T  32566 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaa 32636  T

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Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 160714 - 160784
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaa 69  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||  || ||||| |||| ||||||||    
T  160714 tcatgcagcttagttaaataacaatcagcaacataggcagtatgcaaatcatcatgatataacaatatcaa 160784  T

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Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 501111 - 501231
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| | ||| |||||   |||||||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  501111 tcatgcagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 501208  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  501209 acatataattcaagtaatgcata 501231  T

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Target: scaffold1765 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1112 - 1154
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1112 tcatgcagcttagttaaataacaaacaacaacataggcagtat 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6842 - 6884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  6842 tcatgcagctcagttaaataacaaacagcaacataggcagtat 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 1052 - 1122
Alignment:
Q  107 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  || ||||||||||||    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagatta 1122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12598 - 12687
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||| |||||||||||  ||||||||||||||||||||||||  | |||| ||||| |||| |||||||| | ||| ||||||||||||    
T  12598 tcatgtagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

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Target: scaffold0333 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6641 - 6683
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  6641 tcatgcagcttagttaaataacaaacaacaacataggcagtat 6683  T

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Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14021 - 14063
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  14021 tcatgcagcttagttaaataacaaacaacaacataggcagtat 14063  T

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Target: scaffold0278 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5673 - 5715
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  5673 tcatgcagcttagtaaaataacaaacagcaacataggcagtat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6214 - 6172
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  6214 tcatgcagcttagttaaataacaaacagtaacataggcagtat 6172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8165 - 8119
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa 47  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  8165 tcatgcagcttagttaacaaacaaacagcaacataggcagtatacaa 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2736 - 2694
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  2736 tcatgcagcttagttaaataacaaacatcaacataggcagtat 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 27912 - 28034
Alignment:
Q  51 catgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaacaaca 149  Q
    ||||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||  ||||||||||||||| ||||||||| ||| |||||||||||| ||    
T  27912 catgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatca 28011  T
Q  150 acatatcttattcagcttcacag 172  Q
    ||| ||||||  || ||||||||    
T  28012 acaaatcttaaacaacttcacag 28034  T

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Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23974 - 23932
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  23974 tcatgtagcttagttaaataacaaacagcaacataggcagtat 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4554 - 4709
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacaacat---gacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||||| || || |||||||||||| ||||| ||    || || |||||||||| |  |||||| ||||||||||  ||| |    
T  4554 tcatgcaacttagttaaataacaa-caacagcataggcagtatgcaacagcagcaagatatcataatatcaaatataattcaacaacatcttaaatattc 4652  T
Q  98 aaatattcttcaagtaatgcataa-acattataacacttcataatcaacaacaacat 153  Q
    |  ||| ||||||||||||||||| |||||||| ||| |||| ||||||| ||||||    
T  4653 atttatacttcaagtaatgcataatacattatatcacatcatgatcaacatcaacat 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22761 - 22672
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  22761 tcatgcagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 21497 - 21368
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| |||| ||||||||||| | || ||| | |||||| ||| ||| ||   |||| |||    
T  21497 cagcttcacaaatttcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21398  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  21397 tgcattcagttctggaagtgctcgcgaggc 21368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 82099 - 82219
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||| |||||||||| | | |||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  82099 tcatgaagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattc 82196  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  82197 acatataattcaagtaatgcata 82219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 7)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 62228 - 62270
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  62228 tcatgcagcttagttaaacaacaaacagcaacataggcagtat 62270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 134238 - 134358
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  134238 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 134335  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  134336 acatataattcaagtaatgcata 134358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 136707 - 136827
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  136707 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 136804  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  136805 acatataattcaagtaatgcata 136827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 139176 - 139296
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  139176 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 139273  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  139274 acatataattcaagtaatgcata 139296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 144114 - 144234
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  144114 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 144211  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  144212 acatataattcaagtaatgcata 144234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 132688 - 132722
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacata 35  Q
    ||||||||||||| |||||||||||||||||||||    
T  132688 tcatgcagcttagataaataacaaacagcaacata 132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 141645 - 141765
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtataca---acaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||| |||||||||| |  |||||||||   ||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  141645 tcatgtagcttagttaaataac-aacagcaacaca-acagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 141742  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  141743 acatataattcaagtaatgcata 141765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15868 - 15826
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  15868 tcatgcagcttagttaaataacaaacaacaacataggcagtat 15826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 60807 - 60761
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa 47  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  60807 tcatgcagcttagttaataaacaaacagcaacataggcagtatacaa 60761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 129935 - 130024
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  129935 tcatgcatcttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 130024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11494 - 11562
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  11494 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 11562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 6344 - 6215
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| |||| ||||||||| | | || ||| | |||||| ||||||| || | |||| |||    
T  6344 cagcttcacatatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaact 6245  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  6244 tgcattcagttctggaagtgctcgcgaggc 6215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38347 - 38279
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  38347 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatc 38279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14788 - 14747
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  14788 tcatgcagcttagttaactaacaaacagcaacataggcagta 14747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 582 - 710
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||  ||| |||| ||||| ||||||| ||||| |||| ||||||||||| | || ||| | |||||| ||| ||| ||   |||| ||||    
T  582 agcttcacagatctcaattaacatcttaaataggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 681  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||| | |||||| ||||||||||||||||    
T  682 gcattcagttctggaagtgctcgcgaggc 710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4324 - 4408
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---caacatgacataataatatcaatttcaattcatcaac 84  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||   |||||||||||||||||||||||| ||| ||| ||||    
T  4324 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacaacatgacataataatatcaattgcaaatcaacaac 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 6236 - 6108
Alignment:
Q  163 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 262  Q
    ||||||||||||| ||  |||| || || |||| || ||||| |||  | ||||||||||| || ||| | ||||||||||| || ||   |||||||||    
T  6236 agcttcacagattgcatttaacatcctaaatagatcacattactacttaggggtccatctctaatcaagttatgcgacacaagtcgcaacatcctcactt 6137  T
Q  263 gcactaagttctagaagtgctcgcgaggc 291  Q
    ||| | | |||| ||||||||||||||||    
T  6136 gcattcaattctggaagtgctcgcgaggc 6108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 348 - 476
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| |   |||| |||||  |||||| ||||| |||| ||||||||||| | || ||| | |||||||||| |||  | | |||| |||    
T  348 cagcttcacagatttccgttaacatcttaattaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaact 447  T
Q  262 tgcactaagttctagaagtgctcgcgagg 290  Q
    |||||| ||||||||||||||| ||||||    
T  448 tgcactcagttctagaagtgcttgcgagg 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25136 - 25179
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  25136 tcatgcagcttagttaataaacaaacagcaacataggcagtata 25179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 159 - 201
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  159 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1125 - 1083
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    ||||||||||||||||||||||||||| ||||||||| |||||    
T  1125 tcatgcagcttagttaaataacaaacaacaacataggtagtat 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13158 - 13247
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||||||||  |||||||| |||||||||||||||  | |||| ||||| |||| |||||||| | ||| ||| ||||||||    
T  13158 tcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatct 13247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16191 - 16121
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatcaa 69  Q
    |||||||||||||||||  |||||||| ||||||||| |||||  | |||||||||| |||| ||||||||    
T  16191 tcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaacaacatgatataacaatatcaa 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 159
Target Start/End: Complemental strand, 3574 - 3460
Alignment:
Q  46 aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattataacacttcataatcaa 144  Q
    |||| ||||||||||||||||||| | ||| ||| |||||||| |  ||||||   ||  |||||||||||| || ||||||||| ||| ||||||||||    
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  145 caacaacatatctta 159  Q
    || ||||| ||||||    
T  3474 catcaacacatctta 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45883 - 45841
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat 43  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  45883 tcatgcagcttagttaaataacaaacagaaaaataggcagtat 45841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10557 - 10646
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatct 88  Q
    |||||||||||  |||||||||||||| ||||||||||||||| |||  || ||||| |||| |||||| | | ||| ||||||||||||    
T  10557 tcatgcagcttttttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 1988 - 1883
Alignment:
Q  186 tcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcg 285  Q
    ||||| ||||||| ||||| |||| ||||||||| | | || | | |||||||||||| ||||||   | |||| ||||||| |||||| ||||||||||    
T  1988 tcttaaataggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacattctcatttgcactcagttctggaagtgctcg 1889  T
Q  286 cgaggc 291  Q
    ||||||    
T  1888 cgaggc 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12796 - 12884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 87  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  12796 tcatgcagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10800 - 10869
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | |||||||||   |||| |||||||||||||||||||    
T  10800 tcatgcagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacatcatgacataataatatcaa 10869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 1021 - 881
Alignment:
Q  31 acataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcata-aacattata 129  Q
    ||||||||||||||||||| |||| |||||||||||||| | ||| ||| ||| |||| |  ||| |||  ||  ||||||||||||| | |||||||||    
T  1021 acataggcagtatacaacagcatggcataataatatcaa-tgcaagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattata 923  T
Q  130 acacttcataatcaacaacaacatatcttattcagcttcaca 171  Q
     ||| || ||||| ||| ||||| ||||||  ||||||||||    
T  922 tcacatcgtaatcgacatcaacacatcttaaacagcttcaca 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18118 - 18050
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtat--acaacaacatgacataataatatc 67  Q
    ||||||||||||||||| |||||| |||||||||| ||| |||  |||||| ||||| |||||||||||    
T  18118 tcatgcagcttagttaattaacaatcagcaacatatgcattatgcacaacatcatgatataataatatc 18050  T

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Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 4861 - 4732
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||   |||||||||||||||||  | |  |||||||| ||||| |||  | ||||| |||||||||||||| || | |||||| |    
T  4861 cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacacaaatcgcaatgtcctcaat 4762  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    ||||||  ||| | ||| ||||||||||||    
T  4761 tgcactcggttttggaaatgctcgcgaggc 4732  T

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Target: scaffold0158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 3030 - 3159
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||| || |||||||||| || || |||| ||| ||||| | | || ||| | |||||||||| ||||||   ||||  ||    
T  3030 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatcacaacatcctatct 3129  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  3130 tgcattcagttctggaagtgctcgcgaggc 3159  T

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Target: scaffold0158; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 6696 - 6825
Alignment:
Q  162 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 261  Q
    |||||||||||||| ||| |||| || |||||||||| || || |||| ||| ||||| | | || ||| | |||||||||| ||||||   ||||  ||    
T  6696 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatcacaacatcctatct 6795  T
Q  262 tgcactaagttctagaagtgctcgcgaggc 291  Q
    |||| | |||||| ||||||||||||||||    
T  6796 tgcattcagttctggaagtgctcgcgaggc 6825  T

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Target: scaffold0142 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16811 - 16880
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaa 69  Q
    |||||||||||||||||||||| |||||||||| | | |||||||   ||||||||||||||||||||||||    
T  16811 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacaacatgacataataatatcaa 16880  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12969 - 13057
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa--caacatgacataataatatcaatttcaattcatcaacatc 87  Q
    |||||| ||| |||||||||||||||| ||||||||||||||| |||  || ||||| |||| |||||| | | ||| |||||||||||    
T  12969 tcatgctgctcagttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaacatc 13057  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 129061 - 129021
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  129061 tcatgcagcttagttaa-taacaaacagcaacataggcagta 129021  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 78352 - 78391
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcag 40  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  78352 tcatgcagcttagttaataaacaaacagcaacataggcag 78391  T

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Target: scaffold0444 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13419 - 13539
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  13419 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 13516  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  13517 acatataattcaagtaatgcata 13539  T

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Target: scaffold0254 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20774 - 20894
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  20774 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 20871  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  20872 acatataattcaagtaatgcata 20894  T

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Target: scaffold0134 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37848 - 37968
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  37848 tcatgcagcttagttaaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 37945  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  37946 acatataattcaagtaatgcata 37968  T

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Target: scaffold1403 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 580 - 619
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcag 40  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  580 tcatgcagcttagttaataaacaaacagcaacataggcag 619  T

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Target: scaffold0420 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6375 - 6332
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtata 44  Q
    ||||||| |||||||||  |||||||||||||||||||||||||    
T  6375 tcatgcaacttagttaatgaacaaacagcaacataggcagtata 6332  T

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Target: scaffold0507 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 8151 - 8059
Alignment:
Q  2 catgcagcttagttaaataacaaacagcaacataggcagtatacaa--ca--acatgacataataatatcaatttcaattcatcaacatctta 90  Q
    ||||||||||| |||||||||||| |||| |||||||||||| |||  ||   ||||| ||||||||||||| |  |||||| ||||||||||    
T  8151 catgcagcttaattaaataacaaatagcagcataggcagtatgcaaatcagctcatgatataataatatcaaatgaaattcaacaacatctta 8059  T

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Target: scaffold0165 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 3648 - 3689
Alignment:
Q  135 tcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  3648 tcataatcaacaacaacacatcttaaacagcttcacagatta 3689  T

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Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 7712 - 7753
Alignment:
Q  135 tcataatcaacaacaacatatcttattcagcttcacagatta 176  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  7712 tcataatcaacaacaacacatcttaaacagcttcacagatta 7753  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 97035 - 97076
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  || ||||||||||||||||||||    
T  97035 tcatgcagcttagttaataaataaacagcaacataggcagta 97076  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 106313 - 106354
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagta 42  Q
    |||||||||||||||||  || ||||||||||||||||||||    
T  106313 tcatgcagcttagttaataaataaacagcaacataggcagta 106354  T

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Target: scaffold0230 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13974 - 14094
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacataggcagtatac---aacaacatgacataataatatcaatttcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||| |||||||| |||||||||| |  ||||||||   |||| ||||||||||||||||||| | ||| ||| |||| ||| |  ||| |    
T  13974 tcatgcagcttagataaataac-aacagcaacaca-acagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattc 14071  T
Q  98 aaatattcttcaagtaatgcata 120  Q
    | ||||  |||||||||||||||    
T  14072 acatataattcaagtaatgcata 14094  T

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