View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1975_high_8 (Length: 363)
Name: NF1975_high_8
Description: NF1975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1975_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 56 - 332
Target Start/End: Complemental strand, 27093526 - 27093250
Alignment:
| Q |
56 |
attgggcatactggatcgtataaagtgacgtgttgaagaaaaagaagcgtttaactatagaactctaacttgcagaaaatgtcttttgtatagatagata |
155 |
Q |
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| T |
27093526 |
attgggcatactggatcgtataaagtgacgtgttgaagaaaaagatgcgtttaactatagaactctaacttgcagaaaatgtcttttgtatagatagata |
27093427 |
T |
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| Q |
156 |
gatatcttgtcccatatcgaaagtttgtaagccataggaaggaggattgcctatataaatgaacgtgtggtgcagaagttgaatttatgtaacacagtgg |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| || |
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| T |
27093426 |
gatatcttgtcccatatcgaaagtttgtaagccataggaaggaggattgcctatataaatgaacgtgtggtgcagaagttgtaattgtgtaacacatagg |
27093327 |
T |
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| Q |
256 |
tgacttgttggatagttcaaatttcaaatttgaatcaacaattgttacccaatatatttgttagtgttgaatctgag |
332 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
27093326 |
tgacttgttggatagtacaaatttcaaatttgaatcaacaattgttacccaatatatttgttagagttgaatctgag |
27093250 |
T |
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