View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19762_high_13 (Length: 406)
Name: NF19762_high_13
Description: NF19762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19762_high_13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 15 - 406
Target Start/End: Original strand, 26437444 - 26437833
Alignment:
| Q |
15 |
ctgattgtaatttataagttaagaaatggtt-cttttgcgcgaggtgaacatgattattgcttgtacatatgtaagatcaagcccgaaaacttattcatc |
113 |
Q |
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| T |
26437444 |
ctgattgtaatttgtaagttacgaaatgttttcttttgcgcgaggtgaacatgattattgcttgtacatatataagatcaagcccgaaaacttattcatc |
26437543 |
T |
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| Q |
114 |
atcaaaatctatagtctgcttttgtaaccgagtaagcttaactgaattagaaaaagttttggtttcaaatcgaatcaaagtcttttctgtttggattgct |
213 |
Q |
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| T |
26437544 |
atcaaaatctatagtctgcttttgtaactgagtaagcttaactgaattagaaaaagttttggtttcaaatcgaatcaaagtcttttctgtgttgattgct |
26437643 |
T |
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| Q |
214 |
gtcgtttaattattgatctaatgaaatggaaagttcaaattaatcgatattctgtttataagcggtctctactaataacacagagaagagatagccaggg |
313 |
Q |
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| T |
26437644 |
gccgtttaattattgatctaatgaaatagaaagttcaaattaattgatattctgtttataggcggtct---ctaataacacagagaagagatagtcaggg |
26437740 |
T |
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| Q |
314 |
agaataaacattgagataaagaatcactgagatgctcataagaaggaagcgtttgagagcgtcgctgaactgaacaacgtttaaattacaaca |
406 |
Q |
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| T |
26437741 |
agaataaacattgagataaagaatcactgagatgctcataagaaggaagcgtttgagagcgtcgctgaactgaacaacgtttaaattacaaca |
26437833 |
T |
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