View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19762_high_26 (Length: 298)
Name: NF19762_high_26
Description: NF19762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19762_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 5936136 - 5935872
Alignment:
| Q |
1 |
tacaaataggacatagtgaaaaaacataaattagtgaggaaaacgtgaaatctgtctcaaattttgtctctaattttgtgatgagggaattggacatgaa |
100 |
Q |
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| T |
5936136 |
tacaaataggacatagtgaaaaaacataaattagtgagaaaaacgtgaaatctctctcaaattttgtctctaattttgtgacgagggaattggacatgaa |
5936037 |
T |
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| Q |
101 |
tttcannnnnnnncggttgttaattttacatttggattagtttgtgacaaaaaattcacaaaataattgtttcgtacnnnnnnntgacacatgattgaaa |
200 |
Q |
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| T |
5936036 |
tttcatttttttc--gttgttaattttacatttggattggtttgtg-----------acaaaataattgtttcgtacaaaaaaatgacacatgattgaaa |
5935950 |
T |
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| Q |
201 |
tgaggttgataagtcataagtgtttccaattatagaannnnnnnngaatgattaattgagaagcatatcacacaaatta |
279 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
5935949 |
tgaggttgataagtcataagtgtttccaattatagaa-tttttttgaatgattaattgagaagcatatcacacaaatta |
5935872 |
T |
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