View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19762_high_41 (Length: 234)
Name: NF19762_high_41
Description: NF19762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19762_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 3682590 - 3682800
Alignment:
| Q |
1 |
ctcattgttttctttaaggtttaatctttttagagctttgcttgtcataaattaaagagtgttttatctttgttgaaaagtttacttttaatgtgagtgt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
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| T |
3682590 |
ctcattgttttctttaaggtttaatctttttagagctttgcttgtcataaattaaagagtgttttatctttgttgaaaagtatactttttatgtgagtgt |
3682689 |
T |
|
| Q |
101 |
ggagcttaaattgatgttttgtcgttgggttttctaaacgcatgtgtagtatttggttgttaattataatcttttgcactggatttggtctattttctct |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3682690 |
ggagcttaaattgatgttttgtcgttgggttttctaaacgcatgtgtagtatttggttgttaattataatcttttgcactggatttggtctattttctct |
3682789 |
T |
|
| Q |
201 |
tttgtcttaca |
211 |
Q |
| |
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||||||||||| |
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| T |
3682790 |
tttgtcttaca |
3682800 |
T |
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