View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19764_high_17 (Length: 245)
Name: NF19764_high_17
Description: NF19764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19764_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15997099 - 15996872
Alignment:
| Q |
1 |
caacgcctcaggtactaacattattgcacaaaaccaaggtgcatacatagtaaaatataagcaaaagagatataaaagtcaaatattgtttgtctaaaaa |
100 |
Q |
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| T |
15997099 |
caacgcctcaggtactaacattattgcacaaaaccaaggtgcatacatagtaaaatataagcaaaagagatataaaagtcaaatattgtttgtctaaaaa |
15997000 |
T |
|
| Q |
101 |
gttgaatcaagtgcatgtcttttggaattaatcattgaggttacaaatattctaggtatcagaagttataaatatgtcattaattccttcgacattactt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15996999 |
gttgaatcaagtgcatgtcttttggaattaatcattgaggttacaaatattctaggtatcagaagttataaatatgtcattaattccttcgacattactt |
15996900 |
T |
|
| Q |
201 |
acttaaaagtactctctcactaataaaat |
229 |
Q |
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|||| |||||||||||||||||||||||| |
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| T |
15996899 |
actt-aaagtactctctcactaataaaat |
15996872 |
T |
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