View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19764_low_10 (Length: 375)
Name: NF19764_low_10
Description: NF19764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19764_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 33358134 - 33358495
Alignment:
| Q |
1 |
atgttatcatgcaaggaaattaaaatttataatggttggtggtagttgagtgtctatgggaatgaattctccccagttttttctctctctcatatttctc |
100 |
Q |
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| T |
33358134 |
atgttatcatgaaaggaaattaaaacttataatggttggtggtagttgagagtctatgggaatgaatcctctcaagttttttttctctctcatatttctc |
33358233 |
T |
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| Q |
101 |
atttgatatctcaatcttaccattgaataaaggaaaatgctaatatgtaccttaatgacacgtgttagcatgaccctaaaatagaatatgtgagatgagt |
200 |
Q |
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| T |
33358234 |
atttgatatctcaatctcaccattgaataaaggaaaatggtaatatgtatcttaatggcacgtgttagcatgatcctagaatagaatatgtgagatgagt |
33358333 |
T |
|
| Q |
201 |
ttttaatgtaaaacatatgtagaaaatgtgacatgtctcttaattatgaattgactcatactttctcatgtttctcagagcatgtagaaaatgttataac |
300 |
Q |
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| T |
33358334 |
ttttaacgtaaaacatatgtagaaaatgtgacatgtctcataattatgaaatgactcataatttctcatgtttctcagagcatgtagaaaatgttataac |
33358433 |
T |
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| Q |
301 |
aattctcaatcctcacaatactctctttcacacggtcgaaaacaacatttgttgcaaaatgt |
362 |
Q |
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| T |
33358434 |
aattctcagtcctcacaatactctctttcacatagtcgaacacaacatttgttgcaaaatgt |
33358495 |
T |
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