View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19764_low_14 (Length: 341)

Name: NF19764_low_14
Description: NF19764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19764_low_14
NF19764_low_14
[»] chr5 (3 HSPs)
chr5 (18-341)||(32268392-32268717)
chr5 (68-341)||(41900368-41900643)
chr5 (163-335)||(41886487-41886661)
[»] chr3 (2 HSPs)
chr3 (162-277)||(51113137-51113252)
chr3 (161-277)||(51763330-51763446)
[»] chr4 (8 HSPs)
chr4 (160-277)||(7225101-7225218)
chr4 (156-341)||(21833148-21833338)
chr4 (161-273)||(553759-553871)
chr4 (159-277)||(1755551-1755669)
chr4 (159-195)||(3437642-3437678)
chr4 (240-277)||(53760233-53760270)
chr4 (248-341)||(645194-645289)
chr4 (161-193)||(7308551-7308583)
[»] chr8 (4 HSPs)
chr8 (43-130)||(27923057-27923144)
chr8 (161-273)||(17642879-17642991)
chr8 (161-340)||(17635531-17635712)
chr8 (162-195)||(32151969-32152002)
[»] chr1 (5 HSPs)
chr1 (162-341)||(9587262-9587442)
chr1 (240-341)||(9581769-9581872)
chr1 (139-195)||(7555176-7555232)
chr1 (156-195)||(17352685-17352724)
chr1 (163-195)||(19467453-19467485)
[»] chr7 (2 HSPs)
chr7 (161-195)||(10615713-10615747)
chr7 (240-299)||(7977952-7978013)
[»] chr6 (2 HSPs)
chr6 (159-196)||(8913441-8913478)
chr6 (161-195)||(6417092-6417126)


Alignment Details
Target: chr5 (Bit Score: 307; Significance: 1e-173; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 18 - 341
Target Start/End: Original strand, 32268392 - 32268717
Alignment:
Q  18 agattaatcttgcggagtttggaaagtgaaagctctacggccccgtggtagcattgtgtggggtaactgaggtctaggacttccaacaaggggaaacaat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32268392 agattaatcttgcggagtttggaaagtgaaagctctacggccccgtggtagcattgtgtggggtaattgaggtctaggacttccaacaaggggaaacaat 32268491  T
Q  118 gagagataagtacaagatcgctgctattgatatattgcattttggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32268492 gagagataagtacaagatcgctgctattgatatattgcattttggaacaagtgagagaggtcaaagttgtaatcttcttcgaaaaagtctgcaacccaat 32268591  T
Q  218 tgtgggaatgatgcatttgtttgagagattgagtgacgtgagtttcaatggaaaac--gagatttgacagagaagcttgttgagtttaccgttgaaacac 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  32268592 tgtgggaatgatgcatttgtttgagagattgagtgacgtgagtttcaatggaaaacgagagatttgacagagaagcttgttgagtttaccgttgaaacac 32268691  T
Q  316 gagaggtcgagggaggtgaggttggt 341  Q
    ||||||||||||||||||||||||||    
T  32268692 gagaggtcgagggaggtgaggttggt 32268717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 68 - 341
Target Start/End: Complemental strand, 41900643 - 41900368
Alignment:
Q  68 gcattgtgtggggtaactgaggtctaggacttccaacaaggggaaacaatgagagataagtacaagatcgctgctattgatatattgcattttggaacaa 167  Q
    ||||||||||||||| ||||| || || ||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||| ||||||| | |||||    
T  41900643 gcattgtgtggggtatctgagatcgagaacttccaacaaagggaaacagtcagagataagtaaaagatcgctgctattgatataatgcatttcgtaacaa 41900544  T
Q  168 gtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagtttcaatg 267  Q
    ||||||||||||||||||||||||||||| |||||||   | ||||||| || ||| |||| || || || |||||| |||||||| |||||||||||||    
T  41900543 gtgagagaggtcaaagttgtaatctttttggaaaaagctcgaaacccaaatgcggggatgacgctttggtctgagagtttgagtgatgtgagtttcaatg 41900444  T
Q  268 gaaaa--cgagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgaggttggt 341  Q
    |||||   ||||||||||| ||||| |||||||| ||||| | ||| | |||||| | |||||||||||| |||||    
T  41900443 gaaaatgagagatttgacaaagaagtttgttgaggttaccatagaagcgcgagagattgagggaggtgagattggt 41900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 335
Target Start/End: Complemental strand, 41886661 - 41886487
Alignment:
Q  163 aacaagtgagagaggtcaaagttgtaatctttttcg-aaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagtt 261  Q
    ||||| |||||||||| ||||||||||||||||| | ||||| || |||||||| |||||||||| || | ||  |  || ||||||||||| |||||||    
T  41886661 aacaaatgagagaggttaaagttgtaatctttttggcaaaaactc-gcaacccatttgtgggaataatacgttgatacgaaagattgagtgatgtgagtt 41886563  T
Q  262 tcaatggaaaa--cgagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgag 335  Q
    |||||||||||   |||||||| | |||||| ||| |||| ||||||  ||| |  || |||||||| ||||||||    
T  41886562 tcaatggaaaattagagatttggccgagaagtttgctgaggttaccgcggaagctagaaaggtcgagagaggtgag 41886487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 51113252 - 51113137
Alignment:
Q  162 gaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagtt 261  Q
    ||||||||||||||||||| ||||||||| |||| ||| ||||   |||| ||| |||||||||| |||| |||||| |||| ||||||||| || ||||    
T  51113252 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 51113153  T
Q  262 tcaatggaaaacgaga 277  Q
    ||||||| ||||||||    
T  51113152 tcaatgggaaacgaga 51113137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 277
Target Start/End: Complemental strand, 51763446 - 51763330
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgttt-gagagattgagtgacgtgag 259  Q
    ||||||||||||||| |||||||||||||||||||  ||||||    |||||||| |||| |||| | |  |  ||||| |||||||| ||||| |||||    
T  51763446 ggaacaagtgagagatgtcaaagttgtaatcttttgtgaaaaaactcgcaacccatttgtaggaaaggt-aagctgtttggagagattaagtgatgtgag 51763348  T
Q  260 tttcaatggaaaacgaga 277  Q
    ||||||||| ||||||||    
T  51763347 tttcaatgggaaacgaga 51763330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 7225218 - 7225101
Alignment:
Q  160 tggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgag 259  Q
    ||||||| ||||||||||||||||||||||| ||||  |||| ||  |||||||||  ||  ||||||||| |||| || |||| ||| ||||| |||||    
T  7225218 tggaacatgtgagagaggtcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgag 7225119  T
Q  260 tttcaatggaaaacgaga 277  Q
    ||||||||||||||||||    
T  7225118 tttcaatggaaaacgaga 7225101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 341
Target Start/End: Complemental strand, 21833338 - 21833148
Alignment:
Q  156 attttggaacaagtgagagaggtcaaagttgtaatctttt-tcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgac 254  Q
    ||||||||||||||||||||||||||||| ||||| |||| |  ||||| || ||||||||  || ||||||| ||  |||||| |||| ||||||||||    
T  21833338 attttggaacaagtgagagaggtcaaagtagtaatgttttgtgcaaaaactc-gcaacccatctgcgggaatggtgggtttgttggagatattgagtgac 21833240  T
Q  255 gtgagtttca---atggaaaac--gagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgaggttggt 341  Q
     |||  ||||   |||| ||||  |||||||||| |||||| |||||||| | ||||| ||| |  |||||||  |||||||| ||||||||    
T  21833239 ttgatgttcaatgatgggaaacgagagatttgacggagaaggttgttgaggtcaccgtggaagcgagagaggttaagggaggtaaggttggt 21833148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 553759 - 553871
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagt 260  Q
    |||||| ||||||||||||||||||||||| ||||  || ||||   |||||||| ||| ||||||| ||  ||| |  ||||||| |||||| |||||     
T  553759 ggaacaggtgagagaggtcaaagttgtaatgttttgggagaaagctcgcaacccatttgcgggaatggtgggtttttgggagagatcgagtgatgtgagg 553858  T
Q  261 ttcaatggaaaac 273  Q
    |||||||||||||    
T  553859 ttcaatggaaaac 553871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 1755551 - 1755669
Alignment:
Q  159 ttggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtga 258  Q
    |||||||| ||||||||||||||||||||||||||||  || ||||  ||||||||  | |||||||||  |  || ||| |||||||| |  || || |    
T  1755551 ttggaacatgtgagagaggtcaaagttgtaatcttttgagagaaagcttgcaaccctttggtgggaatggcgtgttggttggagagattaaacgatgtaa 1755650  T
Q  259 gtttcaatggaaaacgaga 277  Q
    |||||||||| ||||||||    
T  1755651 gtttcaatgggaaacgaga 1755669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 3437678 - 3437642
Alignment:
Q  159 ttggaacaagtgagagaggtcaaagttgtaatctttt 195  Q
    ||||||||| |||||||||||||||||||||||||||    
T  3437678 ttggaacaactgagagaggtcaaagttgtaatctttt 3437642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 53760270 - 53760233
Alignment:
Q  240 gagagattgagtgacgtgagtttcaatggaaaacgaga 277  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  53760270 gagagattgagtgatgtgagtttcaatgggaaacgaga 53760233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 645194 - 645289
Alignment:
Q  248 gagtgacgtgagtttcaatggaaaac--gagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgaggttggt 341  Q
    |||||| |||||| ||||||||||||  |||||||| || |||||||||||||| | |||   | | ||||||||||| |||||| | ||||||||    
T  645194 gagtgatgtgagtctcaatggaaaactagagatttggcatagaagcttgttgaggtaacccgagtagcacgagaggtcaagggagttaaggttggt 645289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 7308551 - 7308583
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctt 193  Q
    ||||||||||||| |||||||||||||||||||    
T  7308551 ggaacaagtgagacaggtcaaagttgtaatctt 7308583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 27923057 - 27923144
Alignment:
Q  43 gtgaaagctctacggccccgtggtagcattgtgtggggtaactgaggtctaggacttccaacaaggggaaacaatgagagataagtac 130  Q
    ||||||||||||| || || |||||||| |||   |||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  27923057 gtgaaagctctacagcaccatggtagcagtgtaaagggtaactgaggtcgaggacttccaacaaagggaaataatgagagataagtac 27923144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 17642991 - 17642879
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagt 260  Q
    |||||||||||||||||||||||||||||| || |  || ||||  || |||||| | ||||||||| ||   | ||| |||||||||||||| ||||||    
T  17642991 ggaacaagtgagagaggtcaaagttgtaatattctgggagaaagcttgtaacccattggtgggaatggtgagatggttggagagattgagtgatgtgagt 17642892  T
Q  261 ttcaatggaaaac 273  Q
    |||||||||||||    
T  17642891 ttcaatggaaaac 17642879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 340
Target Start/End: Complemental strand, 17635712 - 17635531
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagt 260  Q
    |||||||||||||||||||||||||||||| ||    || ||||   | |||||| | || |||||| ||  || ||| || |||||||||||  |||||    
T  17635712 ggaacaagtgagagaggtcaaagttgtaatattccgggagaaagctcgtaacccattagttggaatggtgagttggttggacagattgagtgatatgagt 17635613  T
Q  261 ttcaatggaaaa--cgagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgaggttgg 340  Q
    ||||||||||||   |||||||  |||||||||||||| || |  || ||| | | ||||| ||||||||||| ||||||||    
T  17635612 ttcaatggaaaaggagagatttcgcagagaagcttgtttaggtctcctttgtatcccgagaagtcgagggaggcgaggttgg 17635531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 32151969 - 32152002
Alignment:
Q  162 gaacaagtgagagaggtcaaagttgtaatctttt 195  Q
    ||||||||||||||||||||||||||||| ||||    
T  32151969 gaacaagtgagagaggtcaaagttgtaatgtttt 32152002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 341
Target Start/End: Original strand, 9587262 - 9587442
Alignment:
Q  162 gaacaagtgagagaggtcaaagttgtaatctttttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagtt 261  Q
    |||||| ||||||| ||||| ||||||||||||   || ||||  ||||||||||||| |||||||  | |||   | ||||||||||| || |||||||    
T  9587262 gaacaaatgagagatgtcaacgttgtaatctttaaggagaaagcatgcaacccaattgcgggaatgcaggattgactggagagattgagcgatgtgagtt 9587361  T
Q  262 tcaatggaaaac--gagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgaggttggt 341  Q
    ||||||| ||||  |||| |||| | ||||||| |||||| | ||| ||| | | || ||||||||||||||||||||||||    
T  9587362 tcaatgggaaacaagagacttgagatagaagctcgttgaggtcacctttgtagc-cgtgaggtcgagggaggtgaggttggt 9587442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 9581769 - 9581872
Alignment:
Q  240 gagagattgagtgacgtgagtttcaatggaaaac--gagatttgacagagaagcttgttgagtttaccgttgaaacacgagaggtcgagggaggtgaggt 337  Q
    ||||||||||| || |||||||||||||| ||||  |||| |||| | ||||||| |||||| |||||  || | |||| ||||||||||||||||||||    
T  9581769 gagagattgagcgatgtgagtttcaatgggaaacaagagacttgatacagaagctcgttgaggttacctctgtaccacgtgaggtcgagggaggtgaggt 9581868  T
Q  338 tggt 341  Q
    ||||    
T  9581869 tggt 9581872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 7555176 - 7555232
Alignment:
Q  139 tgctattgatatattgcattttggaacaagtgagagaggtcaaagttgtaatctttt 195  Q
    ||||||||||| | | |||||||||||||||||| ||||| ||||||||||| ||||    
T  7555176 tgctattgatagaatccattttggaacaagtgagtgaggttaaagttgtaatatttt 7555232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 17352685 - 17352724
Alignment:
Q  156 attttggaacaagtgagagaggtcaaagttgtaatctttt 195  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  17352685 attttggaacaaatgagagaggtcaatgttgtaatctttt 17352724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 19467485 - 19467453
Alignment:
Q  163 aacaagtgagagaggtcaaagttgtaatctttt 195  Q
    |||||||||||||||||||||||||||| ||||    
T  19467485 aacaagtgagagaggtcaaagttgtaatatttt 19467453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 10615713 - 10615747
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctttt 195  Q
    |||||||||||||||||||||||||||||||||||    
T  10615713 ggaacaagtgagagaggtcaaagttgtaatctttt 10615747  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 7977952 - 7978013
Alignment:
Q  240 gagagattgagtgacgtgagtttcaatggaaaac--gagatttgacagagaagcttgttgag 299  Q
    ||||||||||||||||||| ||||||||| ||||  || ||||| | |||||||||||||||    
T  7977952 gagagattgagtgacgtgattttcaatgggaaacaagaaatttggcggagaagcttgttgag 7978013  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 8913478 - 8913441
Alignment:
Q  159 ttggaacaagtgagagaggtcaaagttgtaatcttttt 196  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  8913478 ttggaacaattgagagaggtcaaagttgtaatcttttt 8913441  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 6417092 - 6417126
Alignment:
Q  161 ggaacaagtgagagaggtcaaagttgtaatctttt 195  Q
    |||||||||||||||||||||||||||| ||||||    
T  6417092 ggaacaagtgagagaggtcaaagttgtattctttt 6417126  T

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