View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19764_low_19 (Length: 292)
Name: NF19764_low_19
Description: NF19764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19764_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 40953486 - 40953213
Alignment:
| Q |
1 |
aaaataattagagtaacttcaatttatttatttattattatctaagagttgggacattggaggagacatcaatttaaaaatgtactgttttctatttatg |
100 |
Q |
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| T |
40953486 |
aaaataattagagtaacttcaatttatttatttaatattatctaagagttgggacattggaggagacatcaatttaaaaatgtactgttttctatttatg |
40953387 |
T |
|
| Q |
101 |
gctaatccaaaaagaataaacacgtaaaagaagcaaaacatctgtaatagttatcaagaatgtttcttactattataggaaagtgaaagtgaggatgatt |
200 |
Q |
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| T |
40953386 |
gctaatccaaaaagaataaacacgtaaaagaagcaaaacatctgtaatagttatcaagaatgtttcttactattgtaggaaagtgaaagtgaggatgatt |
40953287 |
T |
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| Q |
201 |
gacacaaagcaagcatgaatggaattcagaaaatttattatattcagctagcagcatatactctatatataaat |
274 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
40953286 |
gacacaaagcaagcatgaatggaattcagaaaattaattatattcagctagcagcatatactctatatataaat |
40953213 |
T |
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