View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19765_high_9 (Length: 227)
Name: NF19765_high_9
Description: NF19765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19765_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 1504043 - 1503815
Alignment:
| Q |
1 |
aatgtatgtatatctatacattgtgacagaaatttaaagtagtgacatgagataatgtgtgattgnnnnnnnggggaggggga---tgttatgcaatttc |
97 |
Q |
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| T |
1504043 |
aatgtatgtatatctatacattgtgacagaaatttaaagtagtgacatgagataatgtgttattgtttttttggggagggggggggtgttatgcaatttc |
1503944 |
T |
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| Q |
98 |
aatgataaggttatagnnnnnnnntacaaatgatttacgaannnnnnnaaaaacctactttacaacataatgaaatgtttcattttagaagaacttgcta |
197 |
Q |
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|||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1503943 |
aatgataaggttatagaaaaaaa-tataaatgatttacgaatttttttaaaaacctactttacaacataatgaaatgtttcattttagaagaacttgcta |
1503845 |
T |
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| Q |
198 |
tatttggattaactttctggttagaactat |
227 |
Q |
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|||||||||||||||||||||||| ||||| |
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| T |
1503844 |
tatttggattaactttctggttagtactat |
1503815 |
T |
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