View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19765_low_8 (Length: 235)
Name: NF19765_low_8
Description: NF19765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19765_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 12 - 221
Target Start/End: Complemental strand, 17278606 - 17278397
Alignment:
| Q |
12 |
atcatcatatttggcaatttccaagcaatataggaccgtatgttgagttactagggaaagtattctatgatggtcggttaaagggaagaaagaagatctc |
111 |
Q |
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| T |
17278606 |
atcataatatttggcaatttccaagcaatataggaccgtatgttgagttactagggaaagtattctatgatggtcggttaaagggaagaaagaagatctc |
17278507 |
T |
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| Q |
112 |
caattatttatgggtccttgattcattaaaaccatcccttccaaataatccaatgcactatttttgtttcctttcattgagattaaccgttcttggtctt |
211 |
Q |
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| T |
17278506 |
caattatttatgggtccttgattcattaaaaccatcccttccaaataatccaatgcactatttttgtttcctttcattgagattaaccgttcttggtctt |
17278407 |
T |
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| Q |
212 |
tggtaaaaac |
221 |
Q |
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| T |
17278406 |
tggtaaaaac |
17278397 |
T |
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