View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19766_high_15 (Length: 226)
Name: NF19766_high_15
Description: NF19766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19766_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 18968273 - 18968467
Alignment:
| Q |
16 |
aatattcaaacacaacctcagttcttggatcttgaactacccttagccttgtgcttcccattccaactttgtccaacacgattaatcaaataaagagcat |
115 |
Q |
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| T |
18968273 |
aatattcaaacacaacctcaattcttggatcttgaactatccttaaccttgtgcttcccattccaactttgtccaacacgattaatcaaataaagagcat |
18968372 |
T |
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| Q |
116 |
tactcgtaaccctagcaacatcactaaccctcttcttaacatcagccttaacattcccatcaagacaagtatcaccatctgtaagtgcagcactt |
210 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
18968373 |
tactcgtaaccctagcaacatcgctaaccctcttcttaacatcagccctaacattcccatcaagacaagtatcaccatccgtaagtgcagcactt |
18968467 |
T |
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