View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19766_high_6 (Length: 316)
Name: NF19766_high_6
Description: NF19766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19766_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 51705633 - 51705348
Alignment:
| Q |
16 |
attgggatgacaaaagagtgtgtgattttttctactagagaacatcactacatgcaccaaagtagaaaatatataatgttacataagctagtactacatt |
115 |
Q |
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| T |
51705633 |
attgggatgacaaaagagtgtgtgattttttctactagagaacatcactacatgcaccaaagtagaaaatatataatgttacataagctagtactacatt |
51705534 |
T |
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| Q |
116 |
atacaagcatattgaaatcaaacgtatagttaccacaaatgctacattgacagcaacaaagtagtcagcatcaacagcgacagttgcactatcaagtgtc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51705533 |
atacaagcatattgaaatcaaacgtatagttaccacaaatgctacattgacagcaacaaagtagtcagcatcaacagcgacagttgcactatcaagtgtc |
51705434 |
T |
|
| Q |
216 |
ccataacgcaaagcggttgcgtcgtacgttataatgggcatcatgtcattgtctttcccattcctttccccataaaacgttacaaa |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51705433 |
ccataacgcaaagcggttgcgtcgtacgttataatgggcatcatgtcattgtctttcccattcctttccccataaaacgttacaaa |
51705348 |
T |
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