View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19766_low_6 (Length: 325)
Name: NF19766_low_6
Description: NF19766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19766_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 36345067 - 36344772
Alignment:
| Q |
18 |
tggtgaagaaaattaaaactaaagagaatatagatgaaaaaggtgaactattatggtatgtgatttaatgcaggacagagcagttggcaaataattgtag |
117 |
Q |
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| T |
36345067 |
tggtgaagaaaattaaaactaaagagaatatagatgaaaaaggtgaactattatggtatgtgatttaatgcaggacagagcagttggcaaataattgtag |
36344968 |
T |
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| Q |
118 |
aatggggaaatgagacaccacaaagcttagattctgaattatatagaccatgattagagtgtgaagtgagtttggttatattacttattaactaatcttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
36344967 |
aatggggaaatgagacaccacaaagcttagattctgaattatatagaccatgattagagtgtgaagtgagtttggttatattac-tattaactaatcttc |
36344869 |
T |
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| Q |
218 |
attagagaaaaattattgtggctgttaaataggattccaattgtcatgaatatatgtctttccttttgtcctttcatgttattatgttacatttctt |
314 |
Q |
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||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
36344868 |
attggagaaaaattattgtggctgtaaaataggattccaattgtcatgaatatatgtctttctttttgtcctttcatgttattatgttacatttctt |
36344772 |
T |
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