View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19768_high_5 (Length: 390)

Name: NF19768_high_5
Description: NF19768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19768_high_5
NF19768_high_5
[»] chr8 (60 HSPs)
chr8 (94-329)||(24535135-24535369)
chr8 (1-95)||(17841643-17841737)
chr8 (1-93)||(1503638-1503730)
chr8 (1-93)||(26041908-26042000)
chr8 (1-93)||(40779924-40780016)
chr8 (1-93)||(6108028-6108120)
chr8 (1-92)||(14129037-14129128)
chr8 (1-95)||(10044526-10044620)
chr8 (1-95)||(25581032-25581126)
chr8 (1-95)||(42754835-42754929)
chr8 (1-94)||(3596835-3596928)
chr8 (1-93)||(32064924-32065016)
chr8 (1-93)||(37985851-37985943)
chr8 (1-91)||(20091598-20091688)
chr8 (1-91)||(24211169-24211259)
chr8 (1-91)||(34665559-34665649)
chr8 (1-93)||(1645759-1645851)
chr8 (1-93)||(15187738-15187830)
chr8 (1-95)||(30055694-30055788)
chr8 (5-93)||(31347571-31347659)
chr8 (1-91)||(38017110-38017201)
chr8 (1-81)||(35353219-35353299)
chr8 (1-68)||(8454011-8454078)
chr8 (1-91)||(37132477-37132568)
chr8 (1-82)||(39772608-39772689)
chr8 (1-81)||(32394035-32394114)
chr8 (1-90)||(3890412-3890502)
chr8 (3-93)||(7022159-7022249)
chr8 (3-93)||(7017653-7017743)
chr8 (1-62)||(41819594-41819655)
chr8 (13-93)||(30834850-30834931)
chr8 (17-89)||(32064749-32064822)
chr8 (17-89)||(34665386-34665459)
chr8 (17-89)||(7017853-7017926)
chr8 (17-89)||(17841838-17841911)
chr8 (17-89)||(20091789-20091862)
chr8 (17-89)||(31347770-31347843)
chr8 (17-89)||(40780117-40780190)
chr8 (17-81)||(42755030-42755095)
chr8 (28-95)||(24844653-24844721)
chr8 (17-88)||(25581227-25581299)
chr8 (17-90)||(24844847-24844920)
chr8 (28-89)||(32393862-32393924)
chr8 (28-81)||(38016983-38017037)
chr8 (17-81)||(7021990-7022055)
chr8 (17-89)||(8453838-8453911)
chr8 (17-89)||(14128868-14128941)
chr8 (17-89)||(15187564-15187637)
chr8 (17-89)||(26042104-26042177)
chr8 (17-89)||(27782105-27782178)
chr8 (17-89)||(27835441-27835514)
chr8 (28-81)||(30835046-30835099)
chr8 (17-89)||(35353045-35353118)
chr8 (17-89)||(37986043-37986116)
chr8 (31-81)||(1886621-1886672)
chr8 (28-62)||(3890615-3890649)
chr8 (28-89)||(37132657-37132719)
chr8 (17-81)||(6108221-6108286)
chr8 (17-81)||(39772789-39772854)
chr8 (1-53)||(27835288-27835340)
[»] chr5 (37 HSPs)
chr5 (1-95)||(33584122-33584216)
chr5 (1-93)||(4892380-4892472)
chr5 (1-95)||(6043305-6043399)
chr5 (1-94)||(8145551-8145644)
chr5 (1-93)||(3521802-3521894)
chr5 (1-93)||(25398416-25398508)
chr5 (1-90)||(12850980-12851069)
chr5 (1-93)||(37321588-37321680)
chr5 (1-93)||(14138845-14138937)
chr5 (1-92)||(3362957-3363048)
chr5 (1-95)||(38899518-38899613)
chr5 (1-94)||(2477814-2477907)
chr5 (3-93)||(22912852-22912942)
chr5 (1-93)||(12614532-12614625)
chr5 (1-72)||(11360947-11361018)
chr5 (3-93)||(17545477-17545567)
chr5 (1-51)||(4433845-4433895)
chr5 (17-89)||(22913042-22913115)
chr5 (17-89)||(2477640-2477713)
chr5 (17-89)||(6043499-6043572)
chr5 (17-81)||(8145387-8145452)
chr5 (17-89)||(11361119-11361192)
chr5 (22-81)||(10458409-10458469)
chr5 (17-89)||(3362782-3362855)
chr5 (17-89)||(4433995-4434068)
chr5 (17-89)||(4892206-4892279)
chr5 (17-89)||(12614721-12614794)
chr5 (17-62)||(17545673-17545718)
chr5 (17-89)||(25398242-25398315)
chr5 (17-89)||(38899714-38899787)
chr5 (18-62)||(31640767-31640811)
chr5 (1-55)||(13664737-13664791)
chr5 (28-89)||(33584328-33584390)
chr5 (17-81)||(3521994-3522059)
chr5 (17-89)||(12850805-12850878)
chr5 (63-91)||(12614483-12614511)
chr5 (17-76)||(27482017-27482077)
[»] chr4 (53 HSPs)
chr4 (1-95)||(36073527-36073621)
chr4 (1-93)||(46442022-46442114)
chr4 (1-93)||(53123209-53123301)
chr4 (1-91)||(9089048-9089138)
chr4 (1-95)||(44893604-44893698)
chr4 (1-93)||(44893008-44893100)
chr4 (2-93)||(47290245-47290336)
chr4 (3-93)||(10442582-10442672)
chr4 (1-93)||(22199437-22199529)
chr4 (1-93)||(31078614-31078706)
chr4 (1-93)||(36073129-36073221)
chr4 (1-93)||(49387682-49387774)
chr4 (1-93)||(4751625-4751717)
chr4 (1-93)||(21802115-21802207)
chr4 (1-91)||(24128417-24128507)
chr4 (1-93)||(2625015-2625107)
chr4 (1-93)||(7744907-7744999)
chr4 (1-93)||(33530479-33530571)
chr4 (1-93)||(50156374-50156465)
chr4 (1-83)||(23964269-23964351)
chr4 (3-91)||(24392854-24392942)
chr4 (1-91)||(17655608-17655699)
chr4 (1-93)||(11314046-11314139)
chr4 (1-93)||(37219809-37219902)
chr4 (1-93)||(42671846-42671939)
chr4 (28-95)||(25063367-25063435)
chr4 (17-89)||(33530676-33530749)
chr4 (17-89)||(10442777-10442850)
chr4 (17-89)||(22199265-22199338)
chr4 (17-89)||(31078807-31078880)
chr4 (1-93)||(37934736-37934829)
chr4 (17-89)||(49387876-49387949)
chr4 (28-89)||(24392671-24392733)
chr4 (17-89)||(2624841-2624914)
chr4 (17-89)||(7745100-7745173)
chr4 (17-89)||(21802310-21802383)
chr4 (17-89)||(24128243-24128316)
chr4 (1-62)||(30563387-30563448)
chr4 (17-89)||(36072951-36073024)
chr4 (1-92)||(44744610-44744698)
chr4 (17-89)||(46441848-46441921)
chr4 (17-89)||(47290070-47290143)
chr4 (1-95)||(36073254-36073349)
chr4 (17-89)||(53123034-53123108)
chr4 (28-89)||(36073354-36073416)
chr4 (17-89)||(4751450-4751523)
chr4 (17-89)||(44893430-44893503)
chr4 (17-87)||(42671675-42671746)
chr4 (17-63)||(17655461-17655507)
chr4 (17-62)||(9088902-9088947)
chr4 (17-81)||(23964453-23964518)
chr4 (17-89)||(50156566-50156639)
chr4 (17-80)||(36073731-36073795)
[»] chr2 (34 HSPs)
chr2 (1-95)||(33380385-33380479)
chr2 (1-94)||(35160937-35161030)
chr2 (1-95)||(10662066-10662160)
chr2 (1-93)||(23267857-23267949)
chr2 (1-95)||(7475301-7475395)
chr2 (1-95)||(9293368-9293462)
chr2 (1-93)||(13355026-13355118)
chr2 (1-89)||(3989254-3989342)
chr2 (3-93)||(43331092-43331182)
chr2 (1-90)||(31174633-31174722)
chr2 (1-93)||(22592888-22592983)
chr2 (3-95)||(9723586-9723679)
chr2 (3-91)||(21393483-21393570)
chr2 (3-93)||(34320963-34321042)
chr2 (1-52)||(21936260-21936311)
chr2 (48-95)||(39819272-39819319)
chr2 (17-89)||(14941354-14941427)
chr2 (1-62)||(16767288-16767349)
chr2 (17-89)||(9293564-9293637)
chr2 (17-89)||(10661891-10661964)
chr2 (17-89)||(21936085-21936158)
chr2 (17-89)||(23268050-23268123)
chr2 (17-81)||(31174822-31174887)
chr2 (17-89)||(35160761-35160834)
chr2 (17-89)||(43330916-43330989)
chr2 (3-72)||(37335824-37335894)
chr2 (1-53)||(14941199-14941251)
chr2 (17-89)||(7475496-7475569)
chr2 (17-81)||(13354858-13354923)
chr2 (17-89)||(21393676-21393749)
chr2 (29-81)||(22591494-22591547)
chr2 (17-81)||(27847644-27847709)
chr2 (17-89)||(33380211-33380284)
chr2 (18-63)||(37335744-37335789)
[»] scaffold0228 (5 HSPs)
scaffold0228 (1-93)||(16162-16254)
scaffold0228 (1-93)||(26114-26206)
scaffold0228 (17-81)||(8414-8479)
scaffold0228 (17-81)||(15996-16061)
scaffold0228 (17-81)||(25948-26013)
[»] chr3 (44 HSPs)
chr3 (1-93)||(3137209-3137301)
chr3 (1-93)||(34482683-34482775)
chr3 (1-100)||(19650688-19650787)
chr3 (1-95)||(30385578-30385672)
chr3 (1-94)||(37522231-37522324)
chr3 (1-93)||(6042055-6042147)
chr3 (1-93)||(22426140-22426232)
chr3 (1-93)||(33113972-33114064)
chr3 (1-93)||(37216848-37216940)
chr3 (1-92)||(8320378-8320469)
chr3 (1-94)||(3089597-3089690)
chr3 (1-93)||(3456242-3456334)
chr3 (1-96)||(2754897-2754992)
chr3 (1-98)||(48161084-48161181)
chr3 (1-93)||(3574321-3574413)
chr3 (1-95)||(47738289-47738384)
chr3 (1-91)||(33145890-33145980)
chr3 (1-93)||(36864827-36864920)
chr3 (1-95)||(26612924-26613019)
chr3 (3-93)||(40328011-40328102)
chr3 (3-93)||(8361834-8361924)
chr3 (3-93)||(9796824-9796914)
chr3 (3-93)||(41224414-41224504)
chr3 (1-91)||(42921303-42921394)
chr3 (1-81)||(33839713-33839794)
chr3 (1-92)||(46919072-46919164)
chr3 (1-95)||(24343727-24343822)
chr3 (17-89)||(2754721-2754794)
chr3 (4-78)||(41883031-41883106)
chr3 (1-95)||(42298040-42298124)
chr3 (17-89)||(3137402-3137475)
chr3 (17-89)||(3574515-3574588)
chr3 (17-89)||(6041888-6041961)
chr3 (17-81)||(9797017-9797082)
chr3 (17-89)||(33145717-33145789)
chr3 (28-89)||(37217052-37217114)
chr3 (17-62)||(8362033-8362078)
chr3 (17-89)||(11347272-11347345)
chr3 (17-81)||(47738117-47738182)
chr3 (28-89)||(30385015-30385077)
chr3 (28-62)||(41883222-41883256)
chr3 (17-81)||(19650888-19650953)
chr3 (17-81)||(26612797-26612862)
chr3 (17-89)||(34482898-34482971)
[»] chr1 (37 HSPs)
chr1 (1-93)||(51737683-51737775)
chr1 (1-94)||(37821628-37821721)
chr1 (1-93)||(19015582-19015674)
chr1 (1-93)||(36966503-36966595)
chr1 (1-93)||(41876237-41876329)
chr1 (1-92)||(40215166-40215257)
chr1 (1-95)||(25973585-25973679)
chr1 (4-93)||(20304925-20305014)
chr1 (1-93)||(6883665-6883757)
chr1 (1-94)||(9910085-9910178)
chr1 (1-93)||(18404626-18404718)
chr1 (1-93)||(25463854-25463946)
chr1 (1-93)||(44094875-44094967)
chr1 (1-93)||(3559795-3559887)
chr1 (3-95)||(32000059-32000151)
chr1 (3-93)||(33786426-33786516)
chr1 (3-91)||(40273888-40273976)
chr1 (17-94)||(19722893-19722970)
chr1 (1-91)||(44690818-44690909)
chr1 (28-90)||(33786634-33786696)
chr1 (17-89)||(9910281-9910354)
chr1 (1-93)||(10167577-10167670)
chr1 (17-89)||(16045786-16045859)
chr1 (17-89)||(40214992-40215065)
chr1 (17-89)||(40273706-40273779)
chr1 (17-89)||(18404446-18404519)
chr1 (17-89)||(25463680-25463753)
chr1 (17-89)||(44094702-44094775)
chr1 (40-92)||(52064373-52064426)
chr1 (17-89)||(6883491-6883564)
chr1 (17-89)||(19015408-19015481)
chr1 (1-93)||(27523050-27523143)
chr1 (17-89)||(32000255-32000328)
chr1 (17-89)||(36966696-36966769)
chr1 (17-89)||(37821822-37821895)
chr1 (28-89)||(3559621-3559683)
chr1 (1-55)||(52329453-52329507)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-95)||(4574-4668)
scaffold0204 (17-89)||(4400-4473)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-95)||(48027-48121)
scaffold0085 (17-89)||(47854-47927)
[»] chr7 (37 HSPs)
chr7 (1-95)||(24395149-24395243)
chr7 (1-95)||(30848747-30848841)
chr7 (1-93)||(3962156-3962248)
chr7 (9-93)||(25167651-25167735)
chr7 (1-93)||(35445575-35445667)
chr7 (1-93)||(45637889-45637981)
chr7 (1-93)||(48880722-48880814)
chr7 (1-93)||(15329452-15329544)
chr7 (1-93)||(15577642-15577734)
chr7 (1-93)||(34483016-34483108)
chr7 (1-91)||(4974532-4974622)
chr7 (1-95)||(35876422-35876516)
chr7 (1-93)||(42611989-42612081)
chr7 (1-93)||(42696261-42696354)
chr7 (3-92)||(37476876-37476965)
chr7 (3-93)||(15238564-15238654)
chr7 (1-84)||(29737322-29737406)
chr7 (3-93)||(18037157-18037247)
chr7 (1-91)||(20009895-20009986)
chr7 (17-89)||(4974723-4974796)
chr7 (17-89)||(42611815-42611888)
chr7 (17-89)||(45637716-45637789)
chr7 (28-89)||(15577849-15577911)
chr7 (17-89)||(15329277-15329350)
chr7 (17-89)||(34482839-34482912)
chr7 (17-89)||(48880915-48880988)
chr7 (29-95)||(36790269-36790336)
chr7 (28-89)||(37477079-37477141)
chr7 (28-94)||(40880640-40880705)
chr7 (17-62)||(15238414-15238459)
chr7 (17-89)||(24394976-24395049)
chr7 (17-89)||(25167838-25167911)
chr7 (17-89)||(35444562-35444635)
chr7 (30-89)||(36790467-36790527)
chr7 (28-89)||(3961983-3962045)
chr7 (28-81)||(18036990-18037044)
chr7 (17-89)||(29737143-29737216)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-94)||(11799-11892)
scaffold0178 (17-89)||(11625-11698)
[»] chr6 (32 HSPs)
chr6 (1-93)||(17175816-17175908)
chr6 (1-93)||(32702383-32702475)
chr6 (1-93)||(33696875-33696967)
chr6 (1-103)||(28675326-28675428)
chr6 (1-94)||(18365368-18365461)
chr6 (1-94)||(18370632-18370725)
chr6 (1-97)||(33695117-33695213)
chr6 (1-95)||(2309216-2309310)
chr6 (1-93)||(17705264-17705355)
chr6 (1-93)||(23290876-23290968)
chr6 (1-91)||(6031537-6031627)
chr6 (3-91)||(11548386-11548474)
chr6 (2-93)||(29693624-29693716)
chr6 (1-55)||(18889477-18889531)
chr6 (28-92)||(34238883-34238947)
chr6 (1-52)||(6127455-6127506)
chr6 (15-95)||(582520-582602)
chr6 (17-89)||(33695315-33695388)
chr6 (17-89)||(33696700-33696773)
chr6 (28-89)||(25986934-25986996)
chr6 (39-95)||(2121002-2121059)
chr6 (17-89)||(6127279-6127352)
chr6 (17-89)||(23291072-23291145)
chr6 (17-87)||(11548576-11548647)
chr6 (28-89)||(18365572-18365634)
chr6 (28-89)||(18370836-18370898)
chr6 (17-89)||(17176009-17176082)
chr6 (17-89)||(17705453-17705526)
chr6 (17-89)||(28675152-28675225)
chr6 (17-89)||(18889685-18889757)
chr6 (28-89)||(8515724-8515786)
chr6 (17-62)||(9752233-9752278)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-91)||(13020-13110)
scaffold0471 (17-89)||(12846-12919)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-94)||(41188-41281)
scaffold0096 (17-89)||(41015-41088)
[»] scaffold0041 (1 HSPs)
scaffold0041 (28-94)||(85578-85643)
[»] scaffold0665 (1 HSPs)
scaffold0665 (17-89)||(3072-3145)


Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-103; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 94 - 329
Target Start/End: Original strand, 24535135 - 24535369
Alignment:
Q  94 atcaagaaatatccatatttaaactagtgacgcaaccgttaatagatgaatcatcgactcaaatatatttcctcttgctggcatttgtaaagtaatcaaa 193  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24535135 atcaagaaatatccatatttaaactagcgacgcaaccgttaat-gatgaatcatcgactcaaatatatttcctcttgctggcatttgtaaagtaaccaaa 24535233  T
Q  194 tgtgccgatnnnnnnnttattgtgcatgtatattggaaaattaaacatttaaactatttcttgtgtcttcttcccatatttatattgaagtatttttctt 293  Q
    |||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24535234 tgtgccgataaaaaaattattgtgtatgtatattggaaaattaaacatttaaactatttcttgtgtcttcttcccatatttatattgaagtatttttctt 24535333  T
Q  294 cccgtaaaatctagtaaggttttttaatattgcaaa 329  Q
    || |||||||||||||||||||||||||||||||||    
T  24535334 cctgtaaaatctagtaaggttttttaatattgcaaa 24535369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17841737 - 17841643
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841737 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 17841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1503730 - 1503638
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26042000 - 26041908
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26042000 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 26041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 40780016 - 40779924
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40780016 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6108120 - 6108028
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6108120 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14129037 - 14129128
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14129037 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10044526 - 10044620
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10044526 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 10044620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25581126 - 25581032
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25581126 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 25581032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42754929 - 42754835
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42754929 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccat 42754835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3596928 - 3596835
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3596928 ttaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 3596835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 32064924 - 32065016
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32064924 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37985943 - 37985851
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37985943 ttaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20091688 - 20091598
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20091688 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24211259 - 24211169
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  24211259 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34665559 - 34665649
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34665559 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1645851 - 1645759
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  1645851 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttcc 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15187738 - 15187830
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  15187738 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30055694 - 30055788
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  30055694 ttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttccat 30055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 31347659 - 31347571
Alignment:
Q  5 taaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 31347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38017110 - 38017201
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttga-ttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| | | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38017110 ttaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35353219 - 35353299
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 81  Q
    ||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35353219 ttaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8454011 - 8454078
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaa 68  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  8454011 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37132568 - 37132477
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 91  Q
    ||||||||| |||||||||||||| | ||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  37132568 ttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39772689 - 39772608
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatc 82  Q
    |||||||| || |||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  39772689 ttaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32394035 - 32394114
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 81  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394035 ttaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 90  Q
    ||||||||| ||| | |||||||| | |||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 7022159 - 7022249
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| |  |||||||||| | |||||||||||||| ||||||   |||||||| |||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 7017743 - 7017653
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 30834931 - 30834850
Alignment:
Q  13 actgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||| | || ||||| || |||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 24844721 - 24844653
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    |||||||| ||||||| ||||||| ||| |||||| ||||||||||| |||||||||| ||||||||||    
T  24844721 tgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttccat 24844653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcat 88  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 90  Q
    |||||||| | |||||||| || ||||||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 32393924 - 32393862
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32393924 tgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 38017037 - 38016983
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  38017037 tgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||| ||||||||||||||||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | | |||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| ||||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||| |||||| |||||| |||||||  |||||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| | |||||||||||||||||||||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 30835046 - 30835099
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 81  Q
    |||||||| |||||||||||||||||||||||   |||||||| ||||||||||    
T  30835046 tgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  31 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 3890615 - 3890649
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  3890615 tgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37132657 - 37132719
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| ||||||||||||||| |||||||||| |||||||  || ||||||| |||||||    
T  37132657 tgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcatt 37132719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 39772789 - 39772854
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||| ||||||| | |||||||  ||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatat 39772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27835340 - 27835288
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttga 53  Q
    ||||||||||||| |||||||||| | ||||||||||| ||| ||||| ||||    
T  27835340 ttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33584216 - 33584122
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584216 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 33584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4892380 - 4892472
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892380 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6043399 - 6043305
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6043399 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccat 6043305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8145551 - 8145644
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8145551 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 8145644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3521894 - 3521802
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3521894 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25398416 - 25398508
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25398416 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttcc 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12850980 - 12851069
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 90  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12850980 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37321680 - 37321588
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37321680 ttaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttcc 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14138845 - 14138937
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14138845 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3362957 - 3363048
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3362957 ttaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38899613 - 38899518
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  38899613 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttccat 38899518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2477814 - 2477907
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  2477814 ttaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcca 2477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12614625 - 12614532
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| | |||||||||| ||||||||||||||||||||    
T  12614625 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattttcc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11361018 - 11360947
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcat 72  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  11361018 ttaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 17545567 - 17545477
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4433895 - 4433845
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattctt 51  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4433895 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| | |||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  22 taaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | || ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || |||||||||||||||| |||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | || ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31640811 - 31640767
Alignment:
Q  18 aatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  31640811 aatctaaagtcgattattctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13664737 - 13664791
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat 55  Q
    ||||||||| |||||||||||||| | |||||||| |  ||||||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaat 13664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 33584328 - 33584390
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  33584328 tgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 3521994 - 3522059
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||| ||||| ||||||| | |||||| ||||||||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatat 3522059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 12850878 - 12850805
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | || ||||| |||||||||||| ||| | ||||||| |||||||| |||||||||| |||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 91
Target Start/End: Original strand, 12614483 - 12614511
Alignment:
Q  63 ataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||||||    
T  12614483 ataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 27482017 - 27482077
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattctt 76  Q
    |||||||||| |||||||| ||  ||||||||||||||| |||| | ||||||||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 36073527 - 36073621
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073527 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 36073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 46442022 - 46442114
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46442022 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 53123209 - 53123301
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53123209 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9089048 - 9089138
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9089048 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 44893604 - 44893698
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44893604 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccat 44893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44893100 - 44893008
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44893100 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 47290245 - 47290336
Alignment:
Q  2 taataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47290245 taataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 47290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 10442672 - 10442582
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22199437 - 22199529
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  22199437 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31078706 - 31078614
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31078706 ttaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttcc 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36073129 - 36073221
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36073129 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcc 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 49387774 - 49387682
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  49387774 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttcc 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4751625 - 4751717
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  4751625 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcc 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21802207 - 21802115
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21802207 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24128417 - 24128507
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24128417 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2625015 - 2625107
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  2625015 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcc 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7744999 - 7744907
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  7744999 ttaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33530571 - 33530479
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  33530571 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 50156465 - 50156374
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50156465 ttaataaatgagactgaaatctaaggt-gattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 50156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23964351 - 23964269
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatct 83  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  23964351 ttaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17655608 - 17655699
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| | |||||| || |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  17655608 ttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11314139 - 11314046
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| |||||  ||||||| | ||||||||||| ||||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  11314139 ttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37219809 - 37219902
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| ||| |||||||||| | |||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  37219809 ttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattttcc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42671846 - 42671939
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    |||| |||||||||| ||||||||   |||||||| || |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  42671846 ttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 25063435 - 25063367
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    |||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  25063435 tgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttccat 25063367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37934829 - 37934736
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||| |||||||||| | ||||||||||| ||| ||||| |||||| |||||| ||||||||| || | ||||||| ||||||||    
T  37934829 ttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcc 37934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 24392733 - 24392671
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  24392733 tgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30563387 - 30563448
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    ||||||||| ||||||||||||||   ||||||||||| |||||||||||||||| ||||||    
T  30563387 ttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | || ||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    ||||||||| |||||||||||||| | | ||||||| | |||||||||||||||| |   | ||||||||||| |||||||||| |||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36073349 - 36073254
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    ||||||||| ||||||||||||||   | |||||| || ||| |||||||| ||| |||||| ||||||||||| ||  |||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttccat 36073254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt--ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| |||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 36073416 - 36073354
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36073416 tgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | || ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||| ||||||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 42671746 - 42671675
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 87  Q
    |||||||| | |||||||| ||||||||||||||| ||||||| || |||||||| || ||||||| |||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctta 63  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 9088947 - 9088902
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| | |||||||| |||||||||||||||||| |||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaaattttctt 9088902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||  ||||||| | |||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 50156566 - 50156639
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| ||||| |||| |||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgata 80  Q
    |||||||||  |||||||| || |||||||||||| ||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33380385 - 33380479
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380385 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 33380479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35160937 - 35161030
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160937 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 35161030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10662066 - 10662160
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10662066 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 10662160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23267949 - 23267857
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23267949 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7475395 - 7475301
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7475395 ttaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 7475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9293462 - 9293368
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9293462 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 9293368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13355026 - 13355118
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  13355026 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 13355118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3989254 - 3989342
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3989254 ttaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 43331092 - 43331182
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31174722 - 31174633
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 90  Q
    ||||||||||||| ||||||||||||  | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31174722 ttaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22592888 - 22592983
Alignment:
Q  1 ttaataaatgagactgaaa--tctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| |||||||||  ||||| | ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22592888 ttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 22592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 9723586 - 9723679
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttccat 9723679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||||||||| |||||||   ||||||||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 34321042 - 34320963
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcc 34320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21936260 - 21936311
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttg 52  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  21936260 ttaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 39819272 - 39819319
Alignment:
Q  48 tcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttccat 39819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16767349 - 16767288
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||||||||| ||||||    
T  16767349 ttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||||||||||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcat 72  Q
    |||||||||||||||||||||| | |||||| |||| ||||||||| || ||| |||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14941251 - 14941199
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttga 53  Q
    ||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||    
T  14941251 ttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |  ||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | | |||||| |||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 21393676 - 21393749
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| | ||||||||||||| |||||||||| | |||||  |||||||||| |||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  29 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    ||||||| |||||| |||||||||||||||| || |||||||| ||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| || |||||||||||||||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 33380284 - 33380211
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | ||||||||  |||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  18 aatctaaagttgattattgtgccatgtcattcttgaatttttctta 63  Q
    ||||||||  |||||||| ||||||||||||||||||| |||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 89; Significance: 8e-43; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16162 - 16254
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16162 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26114 - 26206
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26114 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 26206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 8e-43; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3137301 - 3137209
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137301 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34482775 - 34482683
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482775 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 19650787 - 19650688
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatcaaga 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  19650787 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttccatcaaga 19650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30385578 - 30385672
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  30385578 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttccat 30385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37522231 - 37522324
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37522231 ttaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 37522324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6042055 - 6042147
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  6042055 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22426232 - 22426140
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22426232 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 22426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33113972 - 33114064
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33113972 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 33114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37216940 - 37216848
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37216940 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8320469 - 8320378
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8320469 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3089597 - 3089690
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  3089597 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcca 3089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3456242 - 3456334
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3456242 ttaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2754897 - 2754992
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatc 96  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  2754897 ttaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttccatc 2754992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48161084 - 48161181
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatcaa 98  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  48161084 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttccttcaa 48161181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3574413 - 3574321
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3574413 ttaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 47738289 - 47738384
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  47738289 ttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttccat 47738384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33145890 - 33145980
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    ||||||||| |||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33145890 ttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36864920 - 36864827
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26612924 - 26613019
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||| ||||||||||    
T  26612924 ttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacattttccat 26613019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 40328011 - 40328102
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    ||||||| |||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 40328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 8361924 - 8361834
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||||||||||||   ||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 41224414 - 41224504
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||| |||||| ||| | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 42921303 - 42921394
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||| ||| | ||||| |||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921303 ttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33839713 - 33839794
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  33839713 ttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46919072 - 46919164
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttc 92  Q
    ||||||||| |||| |||||||| || |||||||| |||||||||||| |||||| |||| | |||||||||||||||||||||| |||||||    
T  46919072 ttaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24343727 - 24343822
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    ||||||||| |||||||||||||| | |||||||  |  |||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||    
T  24343727 ttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttccat 24343822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  4 ataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttga 78  Q
    |||||| ||||||||||| |||| |||||||| | ||||||||||||||||| |||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42298040 - 42298124
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||| | || |||||||| |||||||||||||          ||||||||||||||||||| |||||||||||||    
T  42298040 ttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttg----------ataaaatcattcttgatatttagcattttccat 42298124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || |||| | |||||||| |||||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37217052 - 37217114
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37217052 tgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | | |||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||||| | |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 30385077 - 30385015
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||| ||||| ||||||| |||||||| |||||||||  |||||||    
T  30385077 tgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 41883222 - 41883256
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  41883222 tgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 26612862 - 26612797
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatat 81  Q
    |||||||||  || ||||| ||||||||||||||||||| |||| |||||||||| || |||||||    
T  26612862 aaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaaatcttttttgatat 26612797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 34482898 - 34482971
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| | |||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 8e-43; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 51737683 - 51737775
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737683 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 51737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37821721 - 37821628
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37821721 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 37821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19015582 - 19015674
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19015582 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttcc 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36966595 - 36966503
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36966595 ttaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41876329 - 41876237
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41876329 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40215166 - 40215257
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40215166 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25973585 - 25973679
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25973585 ttaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 25973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 20305014 - 20304925
Alignment:
Q  4 ataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20305014 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 20304925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6883665 - 6883757
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6883665 ttaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9910178 - 9910085
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9910178 ttaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcca 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18404626 - 18404718
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  18404626 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcc 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25463854 - 25463946
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  25463854 ttaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44094875 - 44094967
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  44094875 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttcc 44094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3559795 - 3559887
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3559795 ttaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 32000151 - 32000059
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccat 32000059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 33786516 - 33786426
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 19722970 - 19722893
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcca 19722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44690909 - 44690818
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 91  Q
    ||||||||| |||||| ||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  44690909 ttaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 33786634 - 33786696
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 90  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||    
T  33786634 tgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10167577 - 10167670
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| |||||||||||||||| ||||||||||  ||| | |||||| ||| |||| |||||||||||||||| |||| || ||||||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttcc 10167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||||| |||||||| | ||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 52064426 - 52064373
Alignment:
Q  40 catgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttc 92  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  52064426 catgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27523143 - 27523050
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| ||||| ||||| || | |||||| | ||||||   |||||||||| |||||| ||||||||||||||||||| || ||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | || ||||| || ||||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||| ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 3559683 - 3559621
Alignment:
Q  28 tgattattgtgccatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  3559683 tgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52329453 - 52329507
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat 55  Q
    ||||||| | |||||||||||||| | |||||||| ||| |||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4574 - 4668
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4574 ttaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttccat 4668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48027 - 48121
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48027 ttaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccat 48121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24395149 - 24395243
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  24395149 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttccat 24395243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30848747 - 30848841
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30848747 ttaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttccat 30848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3962156 - 3962248
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3962156 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttcc 3962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  9 tgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35445575 - 35445667
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445575 ttaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45637889 - 45637981
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  45637889 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 45637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48880814 - 48880722
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48880814 ttaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15329452 - 15329544
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  15329452 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttcc 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15577734 - 15577642
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  15577734 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34483016 - 34483108
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  34483016 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4974622 - 4974532
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4974622 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35876422 - 35876516
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||    
T  35876422 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttccat 35876516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42611989 - 42612081
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  42611989 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42696261 - 42696354
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcc 42696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| || ||| ||||||   |||||||||||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 15238564 - 15238654
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29737322 - 29737406
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 84  Q
    |||||||||||||||||||||||| | ||||||||||| ||||| |||||| ||| |||||| ||||||||||||||||||||||    
T  29737322 ttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 18037157 - 18037247
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||| ||||||||||||| | |||||||||| ||||||||||||| ||| ||||||   |||||||| |||||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcc 18037247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20009986 - 20009895
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 91  Q
    ||||||||||||||| ||||||||   ||||||||||| |||||||||||||||| |||| | |||||||||||| ||||||||| ||||||    
T  20009986 ttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15577849 - 15577911
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15577849 tgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 36790336 - 36790269
Alignment:
Q  29 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||| |||||||||||||||| ||| || |||||| |||| ||||||| |||||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttccat 36790269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37477079 - 37477141
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| ||||||||||||||| |||||||||| | |||||| |||||||||| |||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 40880705 - 40880640
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    ||||||||||||||||| ||| || ||| ||||  || |||||||||||||||||||||||||||||    
T  40880705 tgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcca 40880640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24395049 - 24394976
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||||| |  ||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 25167838 - 25167911
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 25167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 36790467 - 36790527
Alignment:
Q  30 attattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||| ||||||||||||||| |||||||||| |||||| | |||||||||| |||||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 3962045 - 3961983
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3962045 tgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18037044 - 18036990
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 81  Q
    |||||||| ||||||||||||||| |||||||||| | |||||| ||||||||||    
T  18037044 tgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 29737216 - 29737143
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| | ||||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11799 - 11892
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  11799 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcca 11892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17175908 - 17175816
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17175908 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 32702383 - 32702475
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32702383 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 32702475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33696875 - 33696967
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  33696875 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcc 33696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28675326 - 28675428
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatcaaga 100  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |    
T  28675326 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttcaaaa 28675425  T
Q  101 aat 103  Q
    |||    
T  28675426 aat 28675428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18365461 - 18365368
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  18365461 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcca 18365368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18370725 - 18370632
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  18370725 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcca 18370632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 33695213 - 33695117
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccatca 97  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  33695213 ttaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttccatca 33695117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2309310 - 2309216
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 95  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  2309310 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttccat 2309216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17705355 - 17705264
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17705355 ttaataaatgagactgaaatctaaggt-gattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23290968 - 23290876
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 93  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23290968 ttaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6031627 - 6031537
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| || |||||    
T  6031627 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  3 aataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||   ||||||||||||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 29693624 - 29693716
Alignment:
Q  2 taataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 93  Q
    |||||||| |||||||||||||| | | |||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  29693624 taataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttcc 29693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18889531 - 18889477
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaat 55  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18889531 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 18889477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 34238947 - 34238883
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 92  Q
    ||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  34238947 tgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6127455 - 6127506
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttg 52  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6127455 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 582602 - 582520
Alignment:
Q  15 tgaaatctaaagttgattattgtgcc-atgtcattcttgaatttttctta-taaaatcattcttgatatctagcattttccat 95  Q
    |||||||||| | |||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttccat 582520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 25986996 - 25986934
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25986996 tgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 2121059 - 2121002
Alignment:
Q  39 ccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttccat 95  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||| ||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttccat 2121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 87  Q
    |||||||| | |||||||| |||||||||||||||||||||||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 18365572 - 18365634
Alignment:
Q  28 tgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18365572 tgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 18370836 - 18370898
Alignment:
Q  28 tgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18370836 tgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || ||||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | ||||||||  | ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| | | |||||| |||||||||||||||||| |||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 8515724 - 8515786
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| ||||||||||||||| ||| | |||| |||||||| |||||||||| |||||||    
T  8515724 tgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt 62  Q
    |||||||| | |||||||| |||||| |||||||||||||||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13020 - 13110
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 91  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13020 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41188 - 41281
Alignment:
Q  1 ttaataaatgagactgaaatctaaagttgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  41188 ttaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttcca 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| |||||||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 85578 - 85643
Alignment:
Q  28 tgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 94  Q
    ||||||||||||||||| ||| || ||| ||||  || |||||||||||||||||||||||||||||    
T  85578 tgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcca 85643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  17 aaatctaaagttgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 89  Q
    |||||||| | |||||||| ||||||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

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