View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19768_high_9 (Length: 262)
Name: NF19768_high_9
Description: NF19768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19768_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 42351724 - 42351962
Alignment:
| Q |
11 |
aaaggaaacgtcaaatgtttgataaagaccaaagatctacttataagttgttgnnnnnnnaatttggtaagaagatctacttataagttatagcccatgc |
110 |
Q |
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| T |
42351724 |
aaaggaaacgtcaaatgtttgataaagaccaaagatctacttataagttgttgtttttttaatttggtaagaagatctacttataagttatagcccatgc |
42351823 |
T |
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| Q |
111 |
ttaattcgactatactgtataattcagaagaaaaaactactagaatgagttgttatttccataatgtaatctttcatggctaatgagagtgacagttttt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42351824 |
ttaattcgactatactgtataattcagaagaaaaaactactaaaatgagttgttatttccataatgtaatctttcatggctaatgagagtgacagttttt |
42351923 |
T |
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| Q |
211 |
gtggtagcacaatcttaaatgaggtagtaactactaact |
249 |
Q |
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|||||||||||||||||||| |||||||||||||||||| |
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| T |
42351924 |
gtggtagcacaatcttaaataaggtagtaactactaact |
42351962 |
T |
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