View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19769_high_19 (Length: 324)
Name: NF19769_high_19
Description: NF19769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19769_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 40281759 - 40281469
Alignment:
| Q |
14 |
agggttggagatagagcagtagacaaggtgttgtcaagtgtgatggtgaaccatagtttacccatctatctatatataattgtaggctctcttgacaaga |
113 |
Q |
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| T |
40281759 |
agggttggagatagagcagtagacaaggtgttgtcaagtgtgatggtgaaccatagtttacccatctatctatatataattgtaggctctcttgacaaga |
40281660 |
T |
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| Q |
114 |
agagagagagattaatatatagatagtagtaataaattatagtaggttataatagtaatgaagtgatattatttcatacgaagcatcgtttgtaaacaat |
213 |
Q |
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| T |
40281659 |
agagaga----ttaatatatagatagtagtaataaattatagtaggttataatagtaatgaagtgatattatttcatacgaagcatcgtttgtaaacaat |
40281564 |
T |
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| Q |
214 |
agaagttgactcaaattcgaactcaccaaactttnnnnnnnnttgaggatcgatcagttgatctagtcatatcacatcaactagcatgccaagtt |
308 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40281563 |
agaagttgactcaaattcgaactcaccaaactttaaaaaaaattgaggatcgatcagttgatctagtcatatcacatcaactagcatgccaagtt |
40281469 |
T |
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