View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19769_low_25 (Length: 320)
Name: NF19769_low_25
Description: NF19769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19769_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 307
Target Start/End: Original strand, 37711645 - 37711928
Alignment:
| Q |
20 |
tttgggtcgttttttaataacatgacttattcatttatgacatgtcaacaattattagacttttatatactgacatggatatttagtgtagcctaacaat |
119 |
Q |
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| T |
37711645 |
tttgggtcgttttttaataacatgacttattcatttatgacatgtcaacaattatt----ttttatatattgacatggatatttagcgtagtctaacgat |
37711740 |
T |
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| Q |
120 |
cttgtagaaccttaactcagatccttgagtgatgatgttgaatgacctttaagtatgacaatttcgacaacaacaacttttttcttcacacgaatggggt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37711741 |
cttgtagaaccttaactcagatccttgagtgatgatgttgaatgacctttaagtatgacaatttcgacaacaacaacttttttcttcacacgaatggggt |
37711840 |
T |
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| Q |
220 |
aatgtacatgcacccactcagacggtcaaattagaaagtatcgtggaataatttatcaatgcaaatacatacttttttgacctatgct |
307 |
Q |
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|||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37711841 |
tatgtacatgcacccactcagacggtcaaatcagaaagtgtcgtggaataatttatcaatgcaaatacatacttttttgacttatgct |
37711928 |
T |
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