View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19769_low_42 (Length: 236)
Name: NF19769_low_42
Description: NF19769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19769_low_42 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45969266 - 45969049
Alignment:
| Q |
1 |
tgggctatagcagtccactgtcttctcccaactctattaaaatagaaaagagaagaaaagttatatcatatatccttgtatcatgttacaatatattaac |
100 |
Q |
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| T |
45969266 |
tgggctatagcagtccactgtcttctcccaactctattaaaatagaaaagagaagaaaagttatatcatatatccttgtatcatgttacaatatattaac |
45969167 |
T |
|
| Q |
101 |
gaataaaccatacataagtaacatatgtttgtacatagtttaatatgagcaaggacaatatatttttgacatatccatgaccattatttaacaagaaata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45969166 |
gaataaaccatacataagtaacatatgtttgtacatagtttaatatgagcaaggacaatatatttttgacatatccatgaccattatttaacaagaaat- |
45969068 |
T |
|
| Q |
201 |
cgaacaaattaacaaaatata |
221 |
Q |
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||||||||||||||||||| |
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| T |
45969067 |
--aacaaattaacaaaatata |
45969049 |
T |
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