View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19769_low_46 (Length: 221)
Name: NF19769_low_46
Description: NF19769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19769_low_46 |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 24062040 - 24062231
Alignment:
| Q |
13 |
catagggaaattatgagtctatttgcgacttcatcgagaggttcaacaaggaagtcatccaagtctgaggagtgatgaagaattgaagatgtatctact- |
111 |
Q |
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| T |
24062040 |
catagggaaattatgagtctatttgcgacttcatcgagaggttcaacaaggaagtcatccaagtctgaggagtgatgaagaattgaagatgtatctactg |
24062139 |
T |
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| Q |
112 |
aaaaaaggtctccaacaaggaaccgatttccgcaaggcgacaggcatcgaggacccacatccctcaacgagtttctcaacctcgcaaaatcc |
203 |
Q |
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| T |
24062140 |
aaaaaaggtctccgacaaggaaccgatttccgcaaggcgacaggcatcgaggacccacatccctcaacgagtttctcaacctcgcaaaatcc |
24062231 |
T |
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