View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1976_high_2 (Length: 488)
Name: NF1976_high_2
Description: NF1976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1976_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 8 - 473
Target Start/End: Original strand, 7108253 - 7108734
Alignment:
| Q |
8 |
agattatactcacttttaaaactactcgataaagaggagaaaatatgataagaaatacatctatcgttttttaaaactctagaccttaacatctttgccc |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
7108253 |
agattatactcacttttaaaactactcgataaagaggagaaaatatgataagaaatacatctatcattttttaaaactctagaccttaacatctttgccc |
7108352 |
T |
|
| Q |
108 |
gatccgtatcagaagacgccattctctcaacaaagcttaagattataagcttcattaagatggattagatatctaatacctaaccctccctcctctaatg |
207 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
7108353 |
aatccgtatcagaagacgccattctcccaacaaagcttaagattataagcttcattaagatggattagatatctaatacctaaccctccttcctctaatg |
7108452 |
T |
|
| Q |
208 |
gcttacaaattttttccatgccacaatgactaatttcctcttctcaatgtccccactccaaatgaagttcctaatgcttctctccaaatcttttaacaat |
307 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108453 |
gcttacaaatttttttcatgccacaatgactaatttcctcttctcaatgtccccactccaaatgaagttcctaatgcttctctccaaatcttttaacaat |
7108552 |
T |
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| Q |
308 |
gaaaatggcaaaccatataagaacaaattgtgtatcagtattccttgaatcaatgagattac----------------tatggttttctggaccccttga |
391 |
Q |
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|||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
7108553 |
gaaaatagcaaagcatataaggacaaattgtgtatcagtattccttgaatcaatgagattactatggttttctggacatatggttttctggaccccttga |
7108652 |
T |
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| Q |
392 |
taaggtctagcttaccttcatccaccaatctagaaatacttctgctcatcacctctttggcaaaacataaaaggagaggaga |
473 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108653 |
taaggtctagcttaccttcatccaccaatctagaaatacctctgctcatcacctctttggcaaaacataaaaggagaggaga |
7108734 |
T |
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