View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19770_low_2 (Length: 458)
Name: NF19770_low_2
Description: NF19770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19770_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 12 - 441
Target Start/End: Original strand, 46669294 - 46669723
Alignment:
| Q |
12 |
atgaatcaatattttttcttcaatttatagattatttttcgctgatcaaactaaacacaatttacacgtttctacttgtgttttgatcaacatgtatcag |
111 |
Q |
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| T |
46669294 |
atgaatcaatattttttcttcaatttatagattatttttcgctgatcaaactaaacacaatttacacgtttctacttgtgttttgatcaacatgtatcag |
46669393 |
T |
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| Q |
112 |
attaggtggagtatgattttccaaatactttgttcattcaatatgttgatcaaagagaaattggtccattttgccatttttactaatattatatatcaat |
211 |
Q |
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| T |
46669394 |
attaggtggagtatgattttccaaatactttattcattcaatatgttgatcaaagagaaattggtccattttgccatttttactaatattatatatcaat |
46669493 |
T |
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| Q |
212 |
taaatcaaatattatgtcgcttaaaattgatataaaatcaataactacaatcataaaatgaatcaattttatcaatgtttttaagaatgagaacaaaaga |
311 |
Q |
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| T |
46669494 |
taaatcaaatattatgtcgcttaaaattgatataaaatcaataactacaatcataaaatgaatcaattttatcaatgtttttaagaatgagaacaaaaga |
46669593 |
T |
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| Q |
312 |
ctaattggatctcaacaataatgtgatcttcctcttgatgttactcctaaacaaaggaaccattattttaagacagcaattgtgcgacaccaccccacat |
411 |
Q |
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| T |
46669594 |
ctaattggatctcaacaataatgtgatcttcctcttgatgttactcctaaacaaaggaaccattattttaagacagcaattgtgcgacaccaccccacat |
46669693 |
T |
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| Q |
412 |
gatgtgatttgatattcctctatagtctat |
441 |
Q |
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| T |
46669694 |
gatgtgatttgatattcctctatagtctat |
46669723 |
T |
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