View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19772_low_5 (Length: 345)
Name: NF19772_low_5
Description: NF19772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19772_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 14 - 316
Target Start/End: Complemental strand, 884431 - 884129
Alignment:
| Q |
14 |
aatattgctgaagatattgaacggtgttggaaagctgaggcaaagcatatatttccacaatcaaattcatgattatctgtttaattatttaggtcaaatt |
113 |
Q |
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| T |
884431 |
aatattgctgaagatattgaacggtgttggaaagctgaggcaaagcatatatttccacaatcaaattcatgattatctgtttaattatttaggtcaaatt |
884332 |
T |
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| Q |
114 |
agatgttattacatgaatggtgatggaggaattttgttgtgccattacatatgtgcataatgttatcaagggtgtggtgctcctccttgtccataaaaat |
213 |
Q |
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| T |
884331 |
agatgttattacatgaatggtgatggaggaattttgttgtgccattacatatgtgcataatgttatcaagggtgtggtgctcctccttgtccataaaaat |
884232 |
T |
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| Q |
214 |
ggaaagaacaaaaaatatggtcagaaaatgtttcctttggtggtgtccttaattcatggatttaattataagccttactttgagaatatgtgatgttgaa |
313 |
Q |
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| T |
884231 |
ggaaagaacaaaaaatatggtcagaaaatgtttcctttggtggtgtccttaattcgtggatttaattataagccttactttgagaatatgtgatgttgaa |
884132 |
T |
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| Q |
314 |
att |
316 |
Q |
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| T |
884131 |
att |
884129 |
T |
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